Pregenerated sensors for MRPL20 (Homo sapiens)
Ensembl gene IDs: ENSG00000242485Ensembl transcript IDs: ENST00000344843.12, ENST00000482352.1, ENST00000487659.1, ENST00000492508.1, ENST00000493287.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAACCTGCTGTCAGTGTGAGACACACACTCCGGCTCCGCGTGGTTaGGGCGCTGGCTCAGGAAGAACCCAGCTGCACACTCGCCTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: RTCCQCETHTPAPRG*GAGSGRTQLHTRLG Trigger: CCCCAGGCGAGTGTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGCGGAGCCGGAGTGTGTGTCTCACACTGACAGCAGGTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR CCA 90 bp | GTGGTTGCGGCGCTGGCTCAGGAAGAACCCAGCTGCACACTCGCCTaGGGGGAGGGAAGGCCTAGGAGAATCCTATCTGGGTGGCACAGC | + |
|
Preference number: 1 (lower is better) Translates to: VVAALAQEEPSCTLA*GEGRPRRILSGWHS Trigger: GCTGTGCCACCCAGATAGGATTCTCCTAGGCCTTCCCTCCCCCCAGGCGAGTGTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR TCA 90 bp | GAGGGAAGCACCTGTGGAATCTGCAGGGAGGCTGGACTCCAGTCCTaGTGTCGGCCCGGGGAACCAAACACCTTGTTCAGGGTCCTTGGT | + |
|
Preference number: 1 (lower is better) Translates to: EGSTCGICREAGLQS*CRPGEPNTLFRVLG Trigger: ACCAAGGACCCTGAACAAGGTGTTTGGTTCCCCGGGCCGACATCAGGACTGGAGTCCAGCCTCCCTGCAGATTCCACAGGTGCTTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR TCA 90 bp | GAATCCTATCTGGGTGGCACAGCAGAGGACTTCCAGGCAGGATGCTaGAGGATAAATGTGGACACGGGTGAGGGAAGCACCTGTGGAATC | + |
|
Preference number: 1 (lower is better) Translates to: ESYLGGTAEDFQAGC*RINVDTGEGSTCGI Trigger: GATTCCACAGGTGCTTCCCTCACCCGTGTCCACATTTATCCTTCAGCATCCTGCCTGGAAGTCCTCTGCTGTGCCACCCAGATAGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR-3UTR TCA 90 bp | CACTCCGGCTCCGCGTGGTTGCGGCGCTGGCTCAGGAAGAACCCAGCTGCACACGCTGGACTCCAGTCCTaGTGTCGGCCCGGGGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: HSGSAWLRRWLRKNPAAHAGLQS*CRPGEP Trigger: TGGTTCCCCGGGCCGACATCAGGACTGGAGTCCAGC...GTGTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGCGGAGCCGGAGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR-3UTR GCA 90 bp | CTGAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGCATGGGAATTGTGACCTaGTCCGTTTCCAGCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LSHPAQPWLSLFCQTGSCMGIVT*SVSSLG Trigger: GCCCAGGCTGGAAACGGAGCAGGTCACAATTCCCAT...GCAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| 3UTR-3UTR TCA 90 bp | CTGAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGCAGACTCCTCAGTAGCTaGCATTACATGTCTCTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: LSHPAQPWLSLFCQTGSCRLLSS*HYMSLY Trigger: GTACAGAGACATGTAATGTCAGCTACTGAGGAGTCT...GCAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| 3UTR CCA 72 bp | GCGCTGGCTCAGGAAGAACCCAGCTGCACACTCGCCTaGGGGGAGGGAAGGCCTAGGAGAATCCTATCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ALAQEEPSCTLA*GEGRPRRILSG Trigger: CCCAGATAGGATTCTCCTAGGCCTTCCCTCCCCCCAGGCGAGTGTGCAGCTGGGTTCTTCCTGAGCCAGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR-3UTR CAA 90 bp | TCCGCGTGGTTGCGGCGCTGGCTCAGGAAGAACCCAGCTGCACACTCGCCTGGGGGGGAACCAAACACCTaGTTCAGGGTCCTTGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SAWLRRWLRKNPAAHSPGGEPNT*FRVLGH Trigger: GTGACCAAGGACCCTGAACAAGGTGTTTGGTTCCCC...CCCAGGCGAGTGTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGCGGA 63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR GCA 72 bp | TGTCAGTGTGAGACACACACTCCGGCTCCGCGTGGTTaGGGCGCTGGCTCAGGAAGAACCCAGCTGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: CQCETHTPAPRG*GAGSGRTQLHT Trigger: AGTGTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGCGGAGCCGGAGTGTGTGTCTCACACTGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGAACCTGCTGTCAGTGTGAGACACACACTCCGGCTCCGCGTGGTTGCGGCCCTTGTTCAGGGTCCTaGGTCACCACCCTGACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IRTCCQCETHTPAPRGCGPCSGS*VTTLTE Trigger: CTCAGTCAGGGTGGTGACCAAGGACCCTGAACAAGG...GCCGCAACCACGCGGAGCCGGAGTGTGTGTCTCACACTGACAGCAGGTTCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR TCA 72 bp | ACCTGTGGAATCTGCAGGGAGGCTGGACTCCAGTCCTaGTGTCGGCCCGGGGAACCAAACACCTTGTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TCGICREAGLQS*CRPGEPNTLFR Trigger: CCTGAACAAGGTGTTTGGTTCCCCGGGCCGACATCAGGACTGGAGTCCAGCCTCCCTGCAGATTCCACAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGCTCATGTTGCCCAGGCTGTaGCTGGCACTATTCCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: EPPCPAMAFFILSDGVLLMLPRL*LALFLG Trigger: GCCTAGGAATAGTGCCAGCAACAGCCTGGGCAACAT...GAGCAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| 3UTR TCA 72 bp | CTGGGTGGCACAGCAGAGGACTTCCAGGCAGGATGCTaGAGGATAAATGTGGACACGGGTGAGGGAAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: LGGTAEDFQAGC*RINVDTGEGST Trigger: GGTGCTTCCCTCACCCGTGTCCACATTTATCCTTCAGCATCCTGCCTGGAAGTCCTCTGCTGTGCCACCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| 3UTR GCA 72 bp | CTGTCAGACGGGGTCCTGCTCTCACCTAGGCTAGAGTaGAGTGGTACCATCATAGCTCACTGCAGCTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSDGVLLSPRLE*SGTIIAHCSFK Trigger: TTTGAAGCTGCAGTGAGCTATGATGGTACCACTGCACTCTAGCCTAGGTGAGAGCAGGACCCCGTCTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR CCA 90 bp | CTCCGGCTCCGCGTGGTTGCGGCGCTGGCTCAGGAAGAACCCAGCTGCACACTCGCGTGGTTGCGGCGCTaGCTCAGGAAGAACCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLRVVAALAQEEPSCTLAWLRR*LRKNPA Trigger: AGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGC...GAGTGTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGCGGAGCCGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR CCA 90 bp | ATCAGAACCTGCTGTCAGTGTGAGACACACACTCCGGCTCCGCGTGGTTGCGGCCACTCCGGCTCCGCGTaGTTGCGGCGCTGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRTCCQCETHTPAPRGCGHSGSA*LRRWLR Trigger: CCTGAGCCAGCGCCGCAACCACGCGGAGCCGGAGTG...GCCGCAACCACGCGGAGCCGGAGTGTGTGTCTCACACTGACAGCAGGTTCTGAT 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR TCA 90 bp | CTCCGGCTCCGCGTGGTTGCGGCGCTGGCTCAGGAAGAACCCAGCTGCACACTCAACCTGCTGTCAGTGTaGGACACACACTCCGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRLRVVAALAQEEPSCTLNLLSV*DTHSGS Trigger: GGAGCCGGAGTGTGTGTCTCACACTGACAGCAGGTT...GAGTGTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGCGGAGCCGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR GCA 90 bp | CTGATGTCGGCCCGGGGAACCAAACACCTTGTTCAGGGTCCTTGGTCACCACCCCCGGCTCCGCGTGGTTaGGGCGCTGGCTCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LMSARGTKHLVQGPWSPPPAPRG*GAGSGR Trigger: TCTTCCTGAGCCAGCGCCGCAACCACGCGGAGCCGG...GGGTGGTGACCAAGGACCCTGAACAAGGTGTTTGGTTCCCCGGGCCGACATCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR TCA 90 bp | TGGAATCTGCAGGGAGGCTGGACTCCAGTCCTGATGTCGGCCCGGGGAACCAAAGCTGGACTCCAGTCCTaGTGTCGGCCCGGGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: WNLQGGWTPVLMSARGTKAGLQS*CRPGEP Trigger: TGGTTCCCCGGGCCGACATCAGGACTGGAGTCCAGC...TTTGGTTCCCCGGGCCGACATCAGGACTGGAGTCCAGCCTCCCTGCAGATTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGCGAAGACCATGGCGCCTaGAGGCCGGCGTCCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LSHPAQPWLSLFCQTGSCEDHGA*RPASRT Trigger: TGTTCGGGACGCCGGCCTGCAGGCGCCATGGTCTTC...GCAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR TCA 90 bp | CACTCCGGCTCCGCGTGGTTGCGGCGCTGGCTCAGGAAGAACCCAGCTGCACACTTCCAGGCAGGATGCTaGAGGATAAATGTGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: HSGSAWLRRWLRKNPAAHFQAGC*RINVDT Trigger: CGTGTCCACATTTATCCTTCAGCATCCTGCCTGGAA...GTGTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGCGGAGCCGGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR GCA 90 bp | ATCTCATCACTCATCAACATGGGAATTGTGACCTGCTCCGTTTCCAGCCTGGGCCACGCGCAGCGCCGCTaGCATCTTGCCCGGGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISSLINMGIVTCSVSSLGHAQRR*HLARVG Trigger: TCCGACCCGGGCAAGATGGCAGCGGCGCTGCGCGTG...GCCCAGGCTGGAAACGGAGCAGGTCACAATTCCCATGTTGATGAGTGATGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR GCA 90 bp | CCTGAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGTTCCTTCCCCGGAAGTaGCTGGCGTGCTTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PEPPCPAMAFFILSDGVLFLPRK*LACFST Trigger: GGTGCTGAAGCACGCCAGGCACTTCCGGGGAAGGAA...CAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR TCA 90 bp | ATCACTCATCAACATGGGAATTGTGACCTGCTCCGTTTCCAGCCTGGGCTGGTTGCCAGAGCTGCGCGGTaGGGAAGACCATGGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITHQHGNCDLLRFQPGLVARAAR*GRPWRL Trigger: CAGGCGCCATGGTCTTCCTCACCGCGCAGCTCTGGC...AACCAGCCCAGGCTGGAAACGGAGCAGGTCACAATTCCCATGTTGATGAGTGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR GCA 90 bp | CCTGAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGAGGCCTGAGCCACCCTaGCCAGCCATGGCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PEPPCPAMAFFILSDGVLRPEPP*PAMAFF Trigger: AAAGAAAGCCATGGCTGGGCAGGGTGGCTCAGGCCT...CAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGAAGGCCTAGGAGAATCCTATCTGGGTGGCACAGCAGAGGACTTCCAGAGCACCTGTGGAATCTaGAGGGAGGCTGGACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GREGLGESYLGGTAEDFQSTCGI*REAGLQ Trigger: CTGGAGTCCAGCCTCCCTGCAGATTCCACAGGTGCT...CTGGAAGTCCTCTGCTGTGCCACCCAGATAGGATTCTCCTAGGCCTTCCCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR TCA 90 bp | TCCGCGTGGTTGCGGCGCTGGCTCAGGAAGAACCCAGCTGCACACTCGCCTGGGAGCTCCACCTGGCACTaGAAAAAGAATGAATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAWLRRWLRKNPAAHSPGSSTWH*KKNESE Trigger: TTCTGATTCATTCTTTTTTCAGTGCCAGGTGGAGCT...CCCAGGCGAGTGTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGCCTAGTCTCCATCTCCTaGCCACCTCAGCCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHPAQPWLSLFCQTGSCLVSIS*PPQPPK Trigger: TTTGGGAGGCTGAGGTGGGCAGGAGATGGAGACTAG...GCAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR CCA 90 bp | ATCAGAACCTGCTGTCAGTGTGAGACACACACTCCGGCTCCGCGTGGTTGCGGCTCTTTGGCTCGTAGATaGCCAGATCCGCTAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: IRTCCQCETHTPAPRGCGSLARR*PDPLGL Trigger: AAGTCCTAGCGGATCTGGCCATCTACGAGCCAAAGA...GCCGCAACCACGCGGAGCCGGAGTGTGTGTCTCACACTGACAGCAGGTTCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR CCA 90 bp | GAATCTGCAGGGAGGCTGGACTCCAGTCCTGATGTCGGCCCGGGGAACCAAACAAGAATCCTATCTGGGTaGCACAGCAGAGGACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESAGRLDSSPDVGPGNQTRILSG*HSRGLP Trigger: TGGAAGTCCTCTGCTGTGCCACCCAGATAGGATTCT...TGTTTGGTTCCCCGGGCCGACATCAGGACTGGAGTCCAGCCTCCCTGCAGATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR TCA 90 bp | ATCACTCATCAACATGGGAATTGTGACCTGCTCCGTTTCCAGCCTGGGCTGGTTGAAAGTAGCGGTCGGTaGCGCGATTCCGCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITHQHGNCDLLRFQPGLVESSGR*RDSAAR Trigger: TCTGGCTGCGGAATCGCGTCACCGACCGCTACTTTC...AACCAGCCCAGGCTGGAAACGGAGCAGGTCACAATTCCCATGTTGATGAGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR TCA 90 bp | GCTTCAGACTCCTCAGTAGCTGACATTACATGTCTCTGTACCACCACACCCAGCCCACCACGCCCCGCATaGTGGTTTCTGCAGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASDSSVADITCLCTTTPSPPRPA*WFLQMS Trigger: GGACATCTGCAGAAACCATCATGCGGGGCGTGGTGG...GCTGGGTGTGGTGGTACAGAGACATGTAATGTCAGCTACTGAGGAGTCTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR TCA 90 bp | GCTTCAGACTCCTCAGTAGCTGACATTACATGTCTCTGTACCACCACACCCAGCCCTGGGGGCTCAAAGTaGTCCCCCTGCTTCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ASDSSVADITCLCTTTPSPGGSK*SPCFRL Trigger: GAGTCTGAAGCAGGGGGATCACTTTGAGCCCCCAGG...GCTGGGTGTGGTGGTACAGAGACATGTAATGTCAGCTACTGAGGAGTCTGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR GCA 90 bp | GAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGCTCACCATCATAGCTCACTaGAGCTTCAAACTCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EPPCPAMAFFILSDGVLLTIIAH*SFKLLG Trigger: CCCCAGGAGTTTGAAGCTGCAGTGAGCTATGATGGT...GAGCAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR CCA 90 bp | GCTTCAGACTCCTCAGTAGCTGACATTACATGTCTCTGTACCACCACACCCAGCTTCCCCGGAAGTGCCTaGCGTGCTTCAGCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASDSSVADITCLCTTTPSFPGSA*RASAPP Trigger: AGGAGGTGCTGAAGCACGCCAGGCACTTCCGGGGAA...GCTGGGTGTGGTGGTACAGAGACATGTAATGTCAGCTACTGAGGAGTCTGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR GCA 90 bp | GAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGCTCTCACCTAGGCTAGAGTaGAGTGGTACCATCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPPCPAMAFFILSDGVLLSPRLE*SGTIIA Trigger: AGCTATGATGGTACCACTGCACTCTAGCCTAGGTGA...GAGCAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGTGTCCAGAATTTCAGTaGGACCCACATACTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEPPCPAMAFFILSDGVLCPEFQ*DPHTHP Trigger: TGGGTGAGTATGTGGGTCCCACTGAAATTCTGGACA...CAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR CCA 90 bp | AGAATCCTATCTGGGTGGCACAGCAGAGGACTTCCAGGCAGGATGCTGAAGGATAATCTGCAGGGAGGCTaGACTCCAGTCCTGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RILSGWHSRGLPGRMLKDNLQGG*TPVLMS Trigger: CGACATCAGGACTGGAGTCCAGCCTCCCTGCAGATT...ATCCTTCAGCATCCTGCCTGGAAGTCCTCTGCTGTGCCACCCAGATAGGATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGATTCCCAATGAGCGCTaGATACTTCAGTCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PEPPCPAMAFFILSDGVLIPNER*ILQSMF Trigger: GAACATGGACTGAAGTATCCAGCGCTCATTGGGAAT...CAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR CCA 90 bp | GAGGGAAGGCCTAGGAGAATCCTATCTGGGTGGCACAGCAGAGGACTTCCAGGCATTCCCAATGAGCGCTaGATACTTCAGTCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGRPRRILSGWHSRGLPGIPNER*ILQSMF Trigger: GAACATGGACTGAAGTATCCAGCGCTCATTGGGAAT...GCCTGGAAGTCCTCTGCTGTGCCACCCAGATAGGATTCTCCTAGGCCTTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR TCA 90 bp | CACAATCTCATCACTCATCAACATGGGAATTGTGACCTGCTCCGTTTCCAGCCTCTGGCCTCAGCCTCCTaGTTAGCTGGGACTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HNLITHQHGNCDLLRFQPLASAS*LAGTTG Trigger: TCCTGTAGTCCCAGCTAATCAGGAGGCTGAGGCCAG...AGGCTGGAAACGGAGCAGGTCACAATTCCCATGTTGATGAGTGATGAGATTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR TCA 90 bp | ATCACTCATCAACATGGGAATTGTGACCTGCTCCGTTTCCAGCCTGGGCTGGTTTCAACATGGGAATTGTaGCCTGCTCCGTTTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ITHQHGNCDLLRFQPGLVSTWEL*PAPFPA Trigger: GGCTGGAAACGGAGCAGGTCACAATTCCCATGTTGA...AACCAGCCCAGGCTGGAAACGGAGCAGGTCACAATTCCCATGTTGATGAGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR GCA 90 bp | AATCTCATCACTCATCAACATGGGAATTGTGACCTGCTCCGTTTCCAGCCTGGGATGGGAATTGTGACCTaGTCCGTTTCCAGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLITHQHGNCDLLRFQPGMGIVT*SVSSLG Trigger: GCCCAGGCTGGAAACGGAGCAGGTCACAATTCCCAT...CCCAGGCTGGAAACGGAGCAGGTCACAATTCCCATGTTGATGAGTGATGAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR CCA 90 bp | ATCACTCATCAACATGGGAATTGTGACCTGCTCCGTTTCCAGCCTGGGCTGGTTAGCCTCCTGATTAGCTaGGACTACAGGAAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITHQHGNCDLLRFQPGLVSLLIS*DYRKHH Trigger: GTGGTGCTTCCTGTAGTCCCAGCTAATCAGGAGGCT...AACCAGCCCAGGCTGGAAACGGAGCAGGTCACAATTCCCATGTTGATGAGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR GCA 90 bp | AGGGCCATCCCTCATGTCTGTTATTGGGTTGTAGATAAACAAAAGTATAAATCACACGCGCAGCGCCGCTaGCATCTTGCCCGGGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAIPHVCYWVVDKQKYKSHAQRR*HLARVG Trigger: TCCGACCCGGGCAAGATGGCAGCGGCGCTGCGCGTG...TGATTTATACTTTTGTTTATCTACAACCCAATAACAGACATGAGGGATGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344843.12 |
||
| CDS-3UTR TCA 90 bp | GCCATCCCTCATGTCTGTTATTGGGTTGTAGATAAACAAAAGTATAAATCAAACGCCAGAGCTGCGCGGTaGGGAAGACCATGGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIPHVCYWVVDKQKYKSNARAAR*GRPWRL Trigger: CAGGCGCCATGGTCTTCCTCACCGCGCAGCTCTGGC...GTTTGATTTATACTTTTGTTTATCTACAACCCAATAACAGACATGAGGGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344843.12 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGGGCCATCCCTCATGTCTGTTATTGGGTTGTAGATAAACAAAAGTATGAAAGTAGCGGTCGGTaGCGCGATTCCGCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDRAIPHVCYWVVDKQKYESSGR*RDSAAR Trigger: TCTGGCTGCGGAATCGCGTCACCGACCGCTACTTTC...ATACTTTTGTTTATCTACAACCCAATAACAGACATGAGGGATGGCCCTGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344843.12 |
||
| CDS-3UTR GCA 90 bp | AGGGCCATCCCTCATGTCTGTTATTGGGTTGTAGATAAACAAAAGTATAAATCAGAAGACCATGGCGCCTaGAGGCCGGCGTCCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RAIPHVCYWVVDKQKYKSEDHGA*RPASRT Trigger: TGTTCGGGACGCCGGCCTGCAGGCGCCATGGTCTTC...TGATTTATACTTTTGTTTATCTACAACCCAATAACAGACATGAGGGATGGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344843.12 |
||
| CDS-3UTR CCA 90 bp | CACAATCTCATCACTCATCAACATGGGAATTGTGACCTGCTCCGTTTCCAGCCTCACCCTGCCCAGCCATaGCTTTCTTTATTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HNLITHQHGNCDLLRFQPHPAQP*LSLFCQ Trigger: CTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTG...AGGCTGGAAACGGAGCAGGTCACAATTCCCATGTTGATGAGTGATGAGATTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR TCA 90 bp | CACTATGTTGCCCAGGCTGTTGCTGGCACTATTCCTAGGCACAATCTCATCACTAGACTCCTCAGTAGCTaGCATTACATGTCTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HYVAQAVAGTIPRHNLITRLLSS*HYMSLY Trigger: GTACAGAGACATGTAATGTCAGCTACTGAGGAGTCT...AGTGATGAGATTGTGCCTAGGAATAGTGCCAGCAACAGCCTGGGCAACATAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR GCA 90 bp | AGGGCCATCCCTCATGTCTGTTATTGGGTTGTAGATAAACAAAAGTATAAATCATTCCGCAGCCAGAGCTaGGCGGTGAGGAAGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: RAIPHVCYWVVDKQKYKSFRSQS*AVRKTM Trigger: CATGGTCTTCCTCACCGCGCAGCTCTGGCTGCGGAA...TGATTTATACTTTTGTTTATCTACAACCCAATAACAGACATGAGGGATGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344843.12 |
||
| CDS-3UTR GCA 90 bp | AGGGCCATCCCTCATGTCTGTTATTGGGTTGTAGATAAACAAAAGTATAAATCATTCCTTCCCCGGAAGTaGCTGGCGTGCTTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RAIPHVCYWVVDKQKYKSFLPRK*LACFST Trigger: GGTGCTGAAGCACGCCAGGCACTTCCGGGGAAGGAA...TGATTTATACTTTTGTTTATCTACAACCCAATAACAGACATGAGGGATGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344843.12 |
||
| CDS-3UTR CCA 90 bp | AGGGCCATCCCTCATGTCTGTTATTGGGTTGTAGATAAACAAAAGTATAAATCATTCCCCGGAAGTGCCTaGCGTGCTTCAGCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAIPHVCYWVVDKQKYKSFPGSA*RASAPP Trigger: AGGAGGTGCTGAAGCACGCCAGGCACTTCCGGGGAA...TGATTTATACTTTTGTTTATCTACAACCCAATAACAGACATGAGGGATGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344843.12 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGGGCCATCCCTCATGTCTGTTATTGGGTTGTAGATAAACAAAAGTATCTGTTGAGCTCCACCTaGCACTTAACTAAATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RDRAIPHVCYWVVDKQKYLLSST*HLTKFP Trigger: TGGGAATTTAGTTAAGTGCCAGGTGGAGCTCAACAG...ATACTTTTGTTTATCTACAACCCAATAACAGACATGAGGGATGGCCCTGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344843.12 |
||
| CDS-3UTR CCA 90 bp | GCCATCCCTCATGTCTGTTATTGGGTTGTAGATAAACAAAAGTATAAATCAAACTCTTTGGCTCGTAGATaGCCAGATCCGCTAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: AIPHVCYWVVDKQKYKSNSLARR*PDPLGL Trigger: AAGTCCTAGCGGATCTGGCCATCTACGAGCCAAAGA...GTTTGATTTATACTTTTGTTTATCTACAACCCAATAACAGACATGAGGGATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344843.12 |
||
| CDS-3UTR CCA 90 bp | GCCATCCCTCATGTCTGTTATTGGGTTGTAGATAAACAAAAGTATAAATCAAACATTCCCAATGAGCGCTaGATACTTCAGTCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIPHVCYWVVDKQKYKSNIPNER*ILQSMF Trigger: GAACATGGACTGAAGTATCCAGCGCTCATTGGGAAT...GTTTGATTTATACTTTTGTTTATCTACAACCCAATAACAGACATGAGGGATGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344843.12 |
||
| CDS GCA 90 bp | CTGCACACTAGCTGGGTCGCGGCGCAGAAACGCAGGGGCCGCGAGTaGGCTGGCCGGCGGGTGTCCCGGGTCCACGCTTACGGTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LHTSWVAAQKRRGRE*AGRRVSRVHAYGPH Trigger: ATGAGGACCGTAAGCGTGGACCCGGGACACCCGCCGGCCAGCGCACTCGCGGCCCCTGCGTTTCTGCGCCGCGACCCAGCTAGTGTGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS CCA 90 bp | TATGAAAGGAAGGGGCTGAGGGTGGCCGGGCGGCTGCACACTAGCTaGGTCGCGGCGCAGAAACGCAGGGGCCGCGAGTGCGCTGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: YERKGLRVAGRLHTS*VAAQKRRGRECAGR Trigger: CCGGCCAGCGCACTCGCGGCCCCTGCGTTTCTGCGCCGCGACCCAGCTAGTGTGCAGCCGCCCGGCCACCCTCAGCCCCTTCCTTTCATA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS GCA 90 bp | GCGATTCCGCAGCCAGAGCTGCGCGGTGAGGAAGACCATGGCGCCTaGAGGCCGGCGTCCCGAACACTCAACAACGCACGCGCAGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AIPQPELRGEEDHGA*RPASRTLNNARAAP Trigger: CGGCGCTGCGCGTGCGTTGTTGAGTGTTCGGGACGCCGGCCTGCAGGCGCCATGGTCTTCCTCACCGCGCAGCTCTGGCTGCGGAATCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344843.12 ENST00000482352.1 ENST00000487659.1 |
||
| CDS-3UTR CAA 90 bp | CACACTCCGGCTCCGCGTGGTTGCGGCGCTGGCTCAGGAAGAACCCAGCTGCACTCCGGCTCCGCGTGGTaGCGGCGCTGGCTCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTPAPRGCGAGSGRTQLHSGSAW*RRWLRK Trigger: CTTCCTGAGCCAGCGCCGCAACCACGCGGAGCCGGA...GTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGCGGAGCCGGAGTGTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS TCA 90 bp | TGGGTTGACTTCAGCTGCCAAAGGGAAGGGAAGCCACCGGAGGGATaGGAGCAGCAGCGACTAGGGCGGTGGCTGGCGACGCAGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: WVDFSCQREGKPPEG*EQQRLGRWLATQGE Trigger: CTCTCCCTGCGTCGCCAGCCACCGCCCTAGTCGCTGCTGCTCTCATCCCTCCGGTGGCTTCCCTTCCCTTTGGCAGCTGAAGTCAACCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS-3UTR CAA 90 bp | CACACTCCGGCTCCGCGTGGTTGCGGCGCTGGCTCAGGAAGAACCCAGCTGCACCCTTGTTCAGGGTCCTaGGTCACCACCCTGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HTPAPRGCGAGSGRTQLHPCSGS*VTTLTE Trigger: CTCAGTCAGGGTGGTGACCAAGGACCCTGAACAAGG...GTGCAGCTGGGTTCTTCCTGAGCCAGCGCCGCAACCACGCGGAGCCGGAGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS CCA 90 bp | AGCACCACGGCAGCAGATAGTAGCCCTGGAGGGTTGGCAAGGGGCTaGGTTGACTTCAGCTGCCAAAGGGAAGGGAAGCCACCGGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: STTAADSSPGGLARG*VDFSCQREGKPPEG Trigger: TCCCTCCGGTGGCTTCCCTTCCCTTTGGCAGCTGAAGTCAACCCAGCCCCTTGCCAACCCTCCAGGGCTACTATCTGCTGCCGTGGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS TCA 90 bp | CGGGGTACGTTAGATGCTAGGTTCATGAGGCTGAGACGGGAGTGGTaGGGCGCAGTAATGAGGCGGCACGTGGACAGAGTGGAGGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGTLDARFMRLRREW*GAVMRRHVDRVEAP Trigger: TGGCGCCTCCACTCTGTCCACGTGCCGCCTCATTACTGCGCCTCACCACTCCCGTCTCAGCCTCATGAACCTAGCATCTAACGTACCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS CCA 90 bp | TCTCTTCGAGGAGCACCACGGCAGCAGATAGTAGCCCTGGAGGGTTaGCAAGGGGCTGGGTTGACTTCAGCTGCCAAAGGGAAGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRGAPRQQIVALEG*QGAGLTSAAKGKGS Trigger: GCTTCCCTTCCCTTTGGCAGCTGAAGTCAACCCAGCCCCTTGCCAACCCTCCAGGGCTACTATCTGCTGCCGTGGTGCTCCTCGAAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS-3UTR CAA 90 bp | CAACATGGGAATTGTGACCTGCTCCGTTTCCAGCCTGGGCTGGTTCACCCCTCCCAGGGTTTCACCACGTaGGCCAGGCTAGTCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QHGNCDLLRFQPGLVHPSQGFTT*ARLVSI Trigger: GATGGAGACTAGCCTGGCCAACGTGGTGAAACCCTG...GGAGGGGTGAACCAGCCCAGGCTGGAAACGGAGCAGGTCACAATTCCCATGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR CAA 90 bp | CCTGATGTCGGCCCGGGGAACCAAACACCTTGTTCAGGGTCCTTGGTCACCACCGGGGAACCAAACACCTaGTTCAGGGTCCTTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PDVGPGNQTPCSGSLVTTGEPNT*FRVLGH Trigger: GTGACCAAGGACCCTGAACAAGGTGTTTGGTTCCCC...GGTGGTGACCAAGGACCCTGAACAAGGTGTTTGGTTCCCCGGGCCGACATCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS-3UTR CAA 90 bp | CTGAGCCACCCTGCCCAGCCATGGCTTTCTTTATTCTGTCAGACGGGGTCCTGCAGTGGTCTCACTATGTaGCCCAGGCTGTTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSHPAQPWLSLFCQTGSCSGLTM*PRLLLA Trigger: TGCCAGCAACAGCCTGGGCAACATAGTGAGACCACT...GCAGGACCCCGTCTGACAGAATAAAGAAAGCCATGGCTGGGCAGGGTGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS-3UTR CAA 90 bp | CACAATCTCATCACTCATCAACATGGGAATTGTGACCTGCTCCGTTTCCAGCCTCAAGAGGTCACCATATaGATACCACACTTAACATGG | + |
|
Preference number: 5 (lower is better) Translates to: HNLITHQHGNCDLLRFQPQEVTI*IPHLTW Trigger: CCATGTTAAGTGTGGTATCAATATGGTGACCTCTTG...AGGCTGGAAACGGAGCAGGTCACAATTCCCATGTTGATGAGTGATGAGATTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS CCA 72 bp | GGTCGCGGCGCAGAAACGCAGGGGCCGCGAGTGCGCTaGCCGGCGGGTGTCCCGGGTCCACGCTTACGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRGAETQGPRVR*PAGVPGPRLRS Trigger: GGACCGTAAGCGTGGACCCGGGACACCCGCCGGCCAGCGCACTCGCGGCCCCTGCGTTTCTGCGCCGCGACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS GCA 72 bp | AGCTGGGTCGCGGCGCAGAAACGCAGGGGCCGCGAGTaGGCTGGCCGGCGGGTGTCCCGGGTCCACGCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SWVAAQKRRGRE*AGRRVSRVHAY Trigger: GTAAGCGTGGACCCGGGACACCCGCCGGCCAGCGCACTCGCGGCCCCTGCGTTTCTGCGCCGCGACCCAGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS CCA 72 bp | AAGGGGCTGAGGGTGGCCGGGCGGCTGCACACTAGCTaGGTCGCGGCGCAGAAACGCAGGGGCCGCGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KGLRVAGRLHTS*VAAQKRRGREC Trigger: GCACTCGCGGCCCCTGCGTTTCTGCGCCGCGACCCAGCTAGTGTGCAGCCGCCCGGCCACCCTCAGCCCCTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS GCA 72 bp | CAGCCAGAGCTGCGCGGTGAGGAAGACCATGGCGCCTaGAGGCCGGCGTCCCGAACACTCAACAACGCACGC | + |
|
Preference number: 6 (lower is better) Translates to: QPELRGEEDHGA*RPASRTLNNAR Trigger: GCGTGCGTTGTTGAGTGTTCGGGACGCCGGCCTGCAGGCGCCATGGTCTTCCTCACCGCGCAGCTCTGGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344843.12 ENST00000482352.1 ENST00000487659.1 |
||
| CDS TCA 72 bp | TTCAGCTGCCAAAGGGAAGGGAAGCCACCGGAGGGATaGGAGCAGCAGCGACTAGGGCGGTGGCTGGCGACG | + |
|
Preference number: 6 (lower is better) Translates to: FSCQREGKPPEG*EQQRLGRWLAT Trigger: CGTCGCCAGCCACCGCCCTAGTCGCTGCTGCTCTCATCCCTCCGGTGGCTTCCCTTCCCTTTGGCAGCTGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS CAA 90 bp | CCACGGCAGCAGATAGTAGCCCTGGAGGGTTGGCAAGGGGCTGGGTaGACTTCAGCTGCCAAAGGGAAGGGAAGCCACCGGAGGGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: PRQQIVALEGWQGAG*TSAAKGKGSHRRDE Trigger: CTCATCCCTCCGGTGGCTTCCCTTCCCTTTGGCAGCTGAAGTCAACCCAGCCCCTTGCCAACCCTCCAGGGCTACTATCTGCTGCCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS CCA 72 bp | GGAGCACCACGGCAGCAGATAGTAGCCCTGGAGGGTTaGCAAGGGGCTGGGTTGACTTCAGCTGCCAAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAPRQQIVALEG*QGAGLTSAAKG Trigger: CCCTTTGGCAGCTGAAGTCAACCCAGCCCCTTGCCAACCCTCCAGGGCTACTATCTGCTGCCGTGGTGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS CAA 72 bp | GGTGGCGGCGGGGCGGGAGAACGGATGTCCCACAGTTaGCCTGCGGGGCGACATAATTTGTCGGAGTTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GGGGAGERMSHS*PAGRHNLSEFR Trigger: TCGAAACTCCGACAAATTATGTCGCCCCGCAGGCAAACTGTGGGACATCCGTTCTCCCGCCCCGCCGCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS GCA 72 bp | GTGGCGGCGGGGCGGGAGAACGGATGTCCCACAGTTTaGCTGCGGGGCGACATAATTTGTCGGAGTTTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: VAAGRENGCPTV*LRGDIICRSFE Trigger: TTCGAAACTCCGACAAATTATGTCGCCCCGCAGGCAAACTGTGGGACATCCGTTCTCCCGCCCCGCCGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS CAA 72 bp | GTCGGCCCGGGGAACCAAACACCTTGTTCAGGGTCCTaGGTCACCACCCTGACTGAGCTGACTGCTGGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: VGPGNQTPCSGS*VTTLTELTAGL Trigger: TAGGCCAGCAGTCAGCTCAGTCAGGGTGGTGACCAAGGACCCTGAACAAGGTGTTTGGTTCCCCGGGCCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492508.1 |
||
| CDS CAA 90 bp | GTCTCTTCGAGGAGCACCACGGCAGCAGATAGTAGCCCTGGAGGGTaGGCAAGGGGCTGGGTTGACTTCAGCTGCCAAAGGGAAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSSRSTTAADSSPGG*ARGWVDFSCQREGK Trigger: CTTCCCTTCCCTTTGGCAGCTGAAGTCAACCCAGCCCCTTGCCAACCCTCCAGGGCTACTATCTGCTGCCGTGGTGCTCCTCGAAGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS CAA 90 bp | CACCTGCAGTCACAGTTACTCGGGAGACTGGGGCGGGAAAATCGCTaGAACCCGGGAGACGAGGTTGCATTAAGCCTAGATCGCGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: HLQSQLLGRLGRENR*NPGDEVALSLDRAI Trigger: AATGGCGCGATCTAGGCTTAATGCAACCTCGTCTCCCGGGTTCAAGCGATTTTCCCGCCCCAGTCTCCCGAGTAACTGTGACTGCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS TCA 72 bp | TTAGATGCTAGGTTCATGAGGCTGAGACGGGAGTGGTaGGGCGCAGTAATGAGGCGGCACGTGGACAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LDARFMRLRREW*GAVMRRHVDRV Trigger: CACTCTGTCCACGTGCCGCCTCATTACTGCGCCTCACCACTCCCGTCTCAGCCTCATGAACCTAGCATCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487659.1 |
||
| CDS CAA 90 bp | CCAGCCTGGGCTGGTTCACCCCTCCTTAGGCAACGTGGTGGTCCCTaGCTCCCAAGAGGTCACCATATTGATACCACACTTAACATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PAWAGSPLLRQRGGP*LPRGHHIDTTLNMD Trigger: GTCCATGTTAAGTGTGGTATCAATATGGTGACCTCTTGGGAGCAAGGGACCACCACGTTGCCTAAGGAGGGGTGAACCAGCCCAGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS CAA 72 bp | GCTGGTTCACCCCTCCTTAGGCAACGTGGTGGTCCCTaGCTCCCAAGAGGTCACCATATTGATACCACACTT | + |
|
Preference number: 6 (lower is better) Translates to: AGSPLLRQRGGP*LPRGHHIDTTL Trigger: AAGTGTGGTATCAATATGGTGACCTCTTGGGAGCAAGGGACCACCACGTTGCCTAAGGAGGGGTGAACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||
| CDS CAA 72 bp | TCACAGTTACTCGGGAGACTGGGGCGGGAAAATCGCTaGAACCCGGGAGACGAGGTTGCATTAAGCCTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SQLLGRLGRENR*NPGDEVALSLD Trigger: ATCTAGGCTTAATGCAACCTCGTCTCCCGGGTTCAAGCGATTTTCCCGCCCCAGTCTCCCGAGTAACTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000487659.1 ENST00000493287.5 |
||
| CDS CAA 72 bp | AACGTGGTGGTCCCTTGCTCCCAAGAGGTCACCATATaGATACCACACTTAACATGGACACCCCATCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: NVVVPCSQEVTI*IPHLTWTPHQH Trigger: ATGCTGATGGGGTGTCCATGTTAAGTGTGGTATCAATATGGTGACCTCTTGGGAGCAAGGGACCACCACGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482352.1 |
||