Pregenerated sensors for MRPL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000112651Ensembl transcript IDs: ENST00000388752.8, ENST00000468957.1, ENST00000470667.5, ENST00000487429.1, ENST00000491898.5
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTAGAAGCATAGACCAATTACCTATTGCTTTGTATTCTACTCTCTaGCTCCTGTACACATACTACATGCAAAAGGAGCCAAATAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: FRSIDQLPIALYSTL*LLYTYYMQKEPNKC Trigger: GCACTTATTTGGCTCCTTTTGCATGTAGTATGTGTACAGGAGTCAGAGAGTAGAATACAAAGCAATAGGTAATTGGTCTATGCTTCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| 3UTR-3UTR CCA 90 bp | GGTATGAAGGAAAATGTCATGGCACTTCCTGTGTATGGCCCATTTTCTTCAATTTTGTTCCCACCTGTGTaGTCTCGGCCCCCAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: GMKENVMALPVYGPFSSILFPPV*SRPPDF Trigger: GAAGTCTGGGGGCCGAGACCACACAGGTGGGAACAA...AATTGAAGAAAATGGGCCATACACAGGAAGTGCCATGACATTTTCCTTCATACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCTTACAAGGTACAAGTGTGTCAATATACAAGTCTAGGGTCTTAACATGTTGTACACATACTACATaGAAAAGGAGCCAAATAAGT | + |
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Preference number: 2 (lower is better) Translates to: SALQGTSVSIYKSRVLTCCTHTT*KRSQIS Trigger: ACTTATTTGGCTCCTTTTGCATGTAGTATGTGTACA...ACATGTTAAGACCCTAGACTTGTATATTGACACACTTGTACCTTGTAAGGCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| 3UTR-3UTR GCA 90 bp | AATTACCTATTGCTTTGTATTCTACTCTCTGACTCCTGTACACATACTACATGCTTAATTACATTCCTCTaGCTTACAAGGTACAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: NYLLLCILLSDSCTHTTCLITFL*LTRYKC Trigger: ACACTTGTACCTTGTAAGGCAGAGGAATGTAATTAA...GCATGTAGTATGTGTACAGGAGTCAGAGAGTAGAATACAAAGCAATAGGTAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| 3UTR-3UTR CAA 90 bp | GAAGGAAAATGTCATGGCACTTCCTGTGTATGGCCCATTTTCTTCAATTACCCAGGTGTAATGGTGTACTaGGTACGACTCTTCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: EGKCHGTSCVWPIFFNYPGVMVY*VRLFQD Trigger: GTCCTGGAAGAGTCGTACCAAGTACACCATTACACC...TGGGTAATTGAAGAAAATGGGCCATACACAGGAAGTGCCATGACATTTTCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS-3UTR GCA 90 bp | GGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTCTCTTCCACACTTTTCCCCCGCCAATACCATaGACCCGGATTCGGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GNWGGDRPSVLYFLFHTFPPPIP*TRIRPV Trigger: CACAGGCCGAATCCGGGTGCATGGTATTGGCGGGGG...AAAAGTGTGGAAGAGAAAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR GCA 90 bp | GCTCCATTACTTGTAAGGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTCCAGCGGTTGCGACCTaGCTTGCCAATGACCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: APLLVRELGWGQTQCPVLPAVAT*LANDPF Trigger: AAACGGGTCATTGGCAAGGCAGGTCGCAACCGCTGG...AAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCCTTACAAGTAATGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR GCA 90 bp | GGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTCTCTTCCACACTTTTCACGTTTCCAGCACCTaGATCTGCCTCTTAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GNWGGDRPSVLYFLFHTFHVSST*ICLLEG Trigger: GCCCTCTAAGAGGCAGATGCAGGTGCTGGAAACGTG...AAAAGTGTGGAAGAGAAAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CCA 90 bp | GGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTCTCTTCCACACTTTTCCATTGTTCATCATCTaGGCGGCGGGGAACAGACTC | + |
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Preference number: 4 (lower is better) Translates to: GNWGGDRPSVLYFLFHTFPLFII*AAGNRL Trigger: GAGTCTGTTCCCCGCCGCCCAGATGATGAACAATGG...AAAAGTGTGGAAGAGAAAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CCA 90 bp | GCTCCATTACTTGTAAGGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTGTAAGGGAATTGGGGTaGGGACAGACCCAGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: APLLVRELGWGQTQCPVLVRELG*GQTQCP Trigger: AGGACACTGGGTCTGTCCCCACCCCAATTCCCTTAC...AAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCCTTACAAGTAATGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR TCA 90 bp | GGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTCTCTTCCACACTTTTCAGAGCTATGTCTGCTaGCCTACAGGGATCATAGCG | + |
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Preference number: 4 (lower is better) Translates to: GNWGGDRPSVLYFLFHTFQSYVC*PTGIIA Trigger: CGCTATGATCCCTGTAGGTCAGCAGACATAGCTCTG...AAAAGTGTGGAAGAGAAAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR GCA 90 bp | GCTCCATTACTTGTAAGGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTTCCCGAGCAGCAACTaGCATTCGGCCTATGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: APLLVRELGWGQTQCPVLFPSSN*HSAYVV Trigger: AACCACATAGGCCGAATGGCAGTTGCTGCTCGGGAA...AAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCCTTACAAGTAATGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CCA 90 bp | AAGGGTATGAAGGAAAATGTCATGGCACTTCCTGTGTATGGCCCATTTTCTTCATCTTCCCGGGTAAGATaGATTACCTGGGCGGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: KGMKENVMALPVYGPFSSSSRVR*ITWAAG Trigger: CCCCGCCGCCCAGGTAATCCATCTTACCCGGGAAGA...TGAAGAAAATGGGCCATACACAGGAAGTGCCATGACATTTTCCTTCATACCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS-3UTR CCA 90 bp | GAAGGAAAATGTCATGGCACTTCCTGTGTATGGCCCATTTTCTTCAATTACCCATTGTTCCCACCTGTGTaGTCTCGGCCCCCAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: EGKCHGTSCVWPIFFNYPLFPPV*SRPPDF Trigger: GAAGTCTGGGGGCCGAGACCACACAGGTGGGAACAA...TGGGTAATTGAAGAAAATGGGCCATACACAGGAAGTGCCATGACATTTTCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| CDS-3UTR CCA 90 bp | GGGTATGAAGGAAAATGTCATGGCACTTCCTGTGTATGGCCCATTTTCTTCAATCCATTGTTCATCATCTaGGCGGCGGGGAACAGACTC | + |
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Preference number: 4 (lower is better) Translates to: GYEGKCHGTSCVWPIFFNPLFII*AAGNRL Trigger: GAGTCTGTTCCCCGCCGCCCAGATGATGAACAATGG...ATTGAAGAAAATGGGCCATACACAGGAAGTGCCATGACATTTTCCTTCATACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000468957.1 |
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| CDS-3UTR CCA 90 bp | GGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTCTCTTCCACACTTTTGCCATTCGGCCTATGTaGTTAGAGTTCAAGATTGTA | + |
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Preference number: 4 (lower is better) Translates to: GNWGGDRPSVLYFLFHTFAIRPM*LEFKIV Trigger: TACAATCTTGAACTCTAACCACATAGGCCGAATGGC...AAAAGTGTGGAAGAGAAAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CCA 90 bp | GCCTTACAAGGTACAAGTGTGTCAATATACAAGTCTAGGGTCTTAACATGTTTTCTCCGGCAGCCCGAATaGAAGCAGCCTTCTTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ALQGTSVSIYKSRVLTCFLRQPE*KQPSSR Trigger: CCGGGAAGAAGGCTGCTTCCATTCGGGCTGCCGGAG...AAAACATGTTAAGACCCTAGACTTGTATATTGACACACTTGTACCTTGTAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS-3UTR TCA 90 bp | TTTGTATTCTACTCTCTGACTCCTGTACACATACTACATGCAAAAGGAGCCAAACATCTGCATGACTCCTaGCCAGACTCGCAACTCCCG | + |
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Preference number: 4 (lower is better) Translates to: FVFYSLTPVHILHAKGAKHLHDS*PDSQLP Trigger: CGGGAGTTGCGAGTCTGGTCAGGAGTCATGCAGATG...TTTGGCTCCTTTTGCATGTAGTATGTGTACAGGAGTCAGAGAGTAGAATACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS-3UTR CCA 90 bp | TATTGCTTTGTATTCTACTCTCTGACTCCTGTACACATACTACATGCAAAAGGAGTAAGATGGATTACCTaGGCGGCGGGGAACAGACTC | + |
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Preference number: 4 (lower is better) Translates to: YCFVFYSLTPVHILHAKGVRWIT*AAGNRL Trigger: GAGTCTGTTCCCCGCCGCCCAGGTAATCCATCTTAC...TCCTTTTGCATGTAGTATGTGTACAGGAGTCAGAGAGTAGAATACAAAGCAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS-3UTR TCA 90 bp | ACCTATTGCTTTGTATTCTACTCTCTGACTCCTGTACACATACTACATGCAAAATGTTCATCATCTGCATaGCTCCTGACCAGACTCGCA | + |
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Preference number: 4 (lower is better) Translates to: TYCFVFYSLTPVHILHAKCSSSA*LLTRLA Trigger: TGCGAGTCTGGTCAGGAGTCATGCAGATGATGAACA...TTTTGCATGTAGTATGTGTACAGGAGTCAGAGAGTAGAATACAAAGCAATAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS-3UTR GCA 90 bp | TGTATTCTACTCTCTGACTCCTGTACACATACTACATGCAAAAGGAGCCAAATACCATTGTTCATCATCTaGATGACTCCTGACCAGACT | + |
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Preference number: 4 (lower is better) Translates to: CILLSDSCTHTTCKRSQIPLFII*MTPDQT Trigger: AGTCTGGTCAGGAGTCATGCAGATGATGAACAATGG...TATTTGGCTCCTTTTGCATGTAGTATGTGTACAGGAGTCAGAGAGTAGAATACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS-3UTR GCA 90 bp | CATTCCTCTGCCTTACAAGGTACAAGTGTGTCAATATACAAGTCTAGGGTCTTATGTACACATACTACATaGAAAAGGAGCCAAATAAGT | + |
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Preference number: 4 (lower is better) Translates to: HSSALQGTSVSIYKSRVLCTHTT*KRSQIS Trigger: ACTTATTTGGCTCCTTTTGCATGTAGTATGTGTACA...TAAGACCCTAGACTTGTATATTGACACACTTGTACCTTGTAAGGCAGAGGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| CDS-3UTR GCA 90 bp | TGTATTCTACTCTCTGACTCCTGTACACATACTACATGCAAAAGGAGCCAAATATGTACACATACTACATaGAAAAGGAGCCAAATAAGT | + |
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Preference number: 4 (lower is better) Translates to: CILLSDSCTHTTCKRSQICTHTT*KRSQIS Trigger: ACTTATTTGGCTCCTTTTGCATGTAGTATGTGTACA...TATTTGGCTCCTTTTGCATGTAGTATGTGTACAGGAGTCAGAGAGTAGAATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| CDS-3UTR GCA 90 bp | ACCTATTGCTTTGTATTCTACTCTCTGACTCCTGTACACATACTACATGCAAAATTAATTACATTCCTCTaGCTTACAAGGTACAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: TYCFVFYSLTPVHILHAKLITFL*LTRYKC Trigger: ACACTTGTACCTTGTAAGGCAGAGGAATGTAATTAA...TTTTGCATGTAGTATGTGTACAGGAGTCAGAGAGTAGAATACAAAGCAATAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| CDS CCA 90 bp | ACTCCCGCCTCGCATGCCCGCAGACCCCATCTCCGGCAGCCCGAATaGAAGCAGCCTTCTTCCCGGGTAAGATGGATTACCTGGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: TPASHARRPHLRQPE*KQPSSRVRWITWAA Trigger: CGCCGCCCAGGTAATCCATCTTACCCGGGAAGAAGGCTGCTTCCATTCGGGCTGCCGGAGATGGGGTCTGCGGGCATGCGAGGCGGGAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS GCA 90 bp | ATCATCTGCATGACTCCTGACCAGACTCGCAACTCCCGCCTCGCATaGCCGCAGACCCCATCTCCGGCAGCCCGAATGGAAGCAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: IICMTPDQTRNSRLA*PQTPSPAARMEAAF Trigger: GAAGGCTGCTTCCATTCGGGCTGCCGGAGATGGGGTCTGCGGGCATGCGAGGCGGGAGTTGCGAGTCTGGTCAGGAGTCATGCAGATGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS-3UTR CAA 90 bp | GCTCCATTACTTGTAAGGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTCCACTGTTAGGCCTCTaGCCCAGCCAGCGGTTGCGA | + |
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Preference number: 5 (lower is better) Translates to: APLLVRELGWGQTQCPVLPLLGL*PSQRLR Trigger: TCGCAACCGCTGGCTGGGCAAGAGGCCTAACAGTGG...AAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCCTTACAAGTAATGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CAA 90 bp | GCTCCATTACTTGTAAGGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTGTTGGAGGAGGCCATaGTTCATCATCTGGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: APLLVRELGWGQTQCPVLCWRRP*FIIWAA Trigger: CGCCGCCCAGATGATGAACAATGGCCTCCTCCAACA...AAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCCTTACAAGTAATGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CAA 90 bp | GGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTCTCTTCCACACTTTTTCACTTTCCACGTTGTaGATGAGGGTCCCCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: GNWGGDRPSVLYFLFHTFSLSTL*MRVPTG Trigger: GCCTGTGGGGACCCTCATCAACAACGTGGAAAGTGA...AAAAGTGTGGAAGAGAAAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CAA 90 bp | GGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTCTCTTCCACACTTTTCGGTTGCGACCTGCCTaGCCAATGACCCGTTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: GNWGGDRPSVLYFLFHTFRLRPA*PMTRLL Trigger: TAACAAACGGGTCATTGGCAAGGCAGGTCGCAACCG...AAAAGTGTGGAAGAGAAAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CAA 90 bp | GGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTCTCTTCCACACTTTTATACTCGGCCTACTGTaGCTACGCACGTTTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GNWGGDRPSVLYFLFHTFILGLL*LRTFPA Trigger: TGCTGGAAACGTGCGTAGCAACAGTAGGCCGAGTAT...AAAAGTGTGGAAGAGAAAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CAA 90 bp | GGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTCTCTTCCACACTTTTTTACTTGTAAGGGAATaGGGGTGGGGACAGACCCAG | + |
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Preference number: 5 (lower is better) Translates to: GNWGGDRPSVLYFLFHTFLLVRE*GWGQTQ Trigger: CTGGGTCTGTCCCCACCCCAATTCCCTTACAAGTAA...AAAAGTGTGGAAGAGAAAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CAA 90 bp | GCTCCATTACTTGTAAGGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTGGTGTAATGGTGTACTaGGTACGACTCTTCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: APLLVRELGWGQTQCPVLGVMVY*VRLFQD Trigger: GTCCTGGAAGAGTCGTACCAAGTACACCATTACACC...AAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCCTTACAAGTAATGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS-3UTR CAA 90 bp | GGGAATTGGGGTGGGGACAGACCCAGTGTCCTGTACTTTCTCTTCCACACTTTTTTCCAGGACACAAAGTaGGCATTAAGGGCCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: GNWGGDRPSVLYFLFHTFFQDTK*ALRATE Trigger: TTCTGTGGCCCTTAATGCCAACTTTGTGTCCTGGAA...AAAAGTGTGGAAGAGAAAGTACAGGACACTGGGTCTGTCCCCACCCCAATTCCC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000388752.8 |
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| CDS GCA 90 bp | AGAGGGACTTACACAGGGGACATACCCCACATGCTGCCCTTGCTTTaGTCTTTAGGAGCAGATACACAAAGAAGGACGCATGCTATGTTT | + |
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Preference number: 5 (lower is better) Translates to: RGTYTGDIPHMLPLL*SLGADTQRRTHAMF Trigger: AAACATAGCATGCGTCCTTCTTTGTGTATCTGCTCCTAAAGAGCAAAGCAAGGGCAGCATGTGGGGTATGTCCCCTGTGTAAGTCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491898.5 |
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| CDS-3UTR CAA 90 bp | TTTGTATTCTACTCTCTGACTCCTGTACACATACTACATGCAAAAGGAGCCAAATGTTGGAGGAGGCCATaGTTCATCATCTGGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: FVFYSLTPVHILHAKGAKCWRRP*FIIWAA Trigger: CGCCGCCCAGATGATGAACAATGGCCTCCTCCAACA...TTTGGCTCCTTTTGCATGTAGTATGTGTACAGGAGTCAGAGAGTAGAATACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468957.1 |
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| CDS-3UTR CAA 90 bp | AAGGGTATGAAGGAAAATGTCATGGCACTTCCTGTGTATGGCCCATTTTCTTCATGTTGGAGGAGGCCATaGTTCATCATCTGCATGACT | + |
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Preference number: 5 (lower is better) Translates to: KGMKENVMALPVYGPFSSCWRRP*FIICMT Trigger: AGTCATGCAGATGATGAACAATGGCCTCCTCCAACA...TGAAGAAAATGGGCCATACACAGGAAGTGCCATGACATTTTCCTTCATACCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS-3UTR CAA 90 bp | CATTCCTCTGCCTTACAAGGTACAAGTGTGTCAATATACAAGTCTAGGGTCTTATTCCAGGACACAAAGTaGGCATTAAGGGCCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: HSSALQGTSVSIYKSRVLFQDTK*ALRATE Trigger: TTCTGTGGCCCTTAATGCCAACTTTGTGTCCTGGAA...TAAGACCCTAGACTTGTATATTGACACACTTGTACCTTGTAAGGCAGAGGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| CDS-3UTR CAA 90 bp | TTTGTATTCTACTCTCTGACTCCTGTACACATACTACATGCAAAAGGAGCCAAAGGTGTAATGGTGTACTaGGTACGACTCTTCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: FVFYSLTPVHILHAKGAKGVMVY*VRLFQD Trigger: GTCCTGGAAGAGTCGTACCAAGTACACCATTACACC...TTTGGCTCCTTTTGCATGTAGTATGTGTACAGGAGTCAGAGAGTAGAATACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTACAAGGTACAAGTGTGTCAATATACAAGTCTAGGGTCTTAACATGTGGTGTAATGGTGTACTaGGTACGACTCTTCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SALQGTSVSIYKSRVLTCGVMVY*VRLFQD Trigger: GTCCTGGAAGAGTCGTACCAAGTACACCATTACACC...ACATGTTAAGACCCTAGACTTGTATATTGACACACTTGTACCTTGTAAGGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| CDS-3UTR CAA 90 bp | GCCTTACAAGGTACAAGTGTGTCAATATACAAGTCTAGGGTCTTAACATGTTTTTTCCAGGACACAAAGTaGGCATTAAGGGCCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: ALQGTSVSIYKSRVLTCFFQDTK*ALRATE Trigger: TTCTGTGGCCCTTAATGCCAACTTTGTGTCCTGGAA...AAAACATGTTAAGACCCTAGACTTGTATATTGACACACTTGTACCTTGTAAGGC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000468957.1 ENST00000487429.1 |
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| CDS CCA 72 bp | TCGCATGCCCGCAGACCCCATCTCCGGCAGCCCGAATaGAAGCAGCCTTCTTCCCGGGTAAGATGGATTACC | + |
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Preference number: 6 (lower is better) Translates to: SHARRPHLRQPE*KQPSSRVRWIT Trigger: GGTAATCCATCTTACCCGGGAAGAAGGCTGCTTCCATTCGGGCTGCCGGAGATGGGGTCTGCGGGCATGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487429.1 |
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| CDS CAA 90 bp | CCCGAGCAGCAACTAAAAGACAGGATTTCATTAGCTCTAGAACTTTaGCTGCCTCCAGCCCACACATCTGGTAGCCATCTCTCACCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PEQQLKDRISLALEL*LPPAHTSGSHLSPA Trigger: GGCAGGTGAGAGATGGCTACCAGATGTGTGGGCTGGAGGCAGCAAAAGTTCTAGAGCTAATGAAATCCTGTCTTTTAGTTGCTGCTCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000470667.5 ENST00000491898.5 |
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| CDS CAA 90 bp | TTTCTCTGCCAGTACCAGATGTGGAACCATGGGTTCAGACTCTCCTaGCCTTTCCAAACTATAGGACCCAGGCAACTCCTTTCCCCATAC | + |
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Preference number: 6 (lower is better) Translates to: FLCQYQMWNHGFRLS*PFQTIGPRQLLSPY Trigger: GTATGGGGAAAGGAGTTGCCTGGGTCCTATAGTTTGGAAAGGCAAGGAGAGTCTGAACCCATGGTTCCACATCTGGTACTGGCAGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491898.5 |
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| CDS CAA 90 bp | CAGAGGGACTTACACAGGGGACATACCCCACATGCTGCCCTTGCTTaGCTCTTTAGGAGCAGATACACAAAGAAGGACGCATGCTATGTT | + |
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Preference number: 6 (lower is better) Translates to: QRDLHRGHTPHAALA*LFRSRYTKKDACYV Trigger: AACATAGCATGCGTCCTTCTTTGTGTATCTGCTCCTAAAGAGCAAAGCAAGGGCAGCATGTGGGGTATGTCCCCTGTGTAAGTCCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491898.5 |
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| CDS GCA 72 bp | TACACAGGGGACATACCCCACATGCTGCCCTTGCTTTaGTCTTTAGGAGCAGATACACAAAGAAGGACGCAT | + |
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Preference number: 6 (lower is better) Translates to: YTGDIPHMLPLL*SLGADTQRRTH Trigger: ATGCGTCCTTCTTTGTGTATCTGCTCCTAAAGAGCAAAGCAAGGGCAGCATGTGGGGTATGTCCCCTGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491898.5 |
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| CDS CAA 72 bp | CAGTACCAGATGTGGAACCATGGGTTCAGACTCTCCTaGCCTTTCCAAACTATAGGACCCAGGCAACTCCTT | + |
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Preference number: 6 (lower is better) Translates to: QYQMWNHGFRLS*PFQTIGPRQLL Trigger: AAGGAGTTGCCTGGGTCCTATAGTTTGGAAAGGCAAGGAGAGTCTGAACCCATGGTTCCACATCTGGTACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491898.5 |
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| CDS CAA 72 bp | TTACACAGGGGACATACCCCACATGCTGCCCTTGCTTaGCTCTTTAGGAGCAGATACACAAAGAAGGACGCA | + |
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Preference number: 6 (lower is better) Translates to: LHRGHTPHAALA*LFRSRYTKKDA Trigger: TGCGTCCTTCTTTGTGTATCTGCTCCTAAAGAGCAAAGCAAGGGCAGCATGTGGGGTATGTCCCCTGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491898.5 |
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