Pregenerated sensors for MRPL15 (Homo sapiens)
Ensembl gene IDs: ENSG00000137547Ensembl transcript IDs: ENST00000260102.9, ENST00000519831.5, ENST00000522521.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGAGTTGAGGGTTTACCATCTTGGCATTGGGTAGCCGTGTTTCCCTaGGGCTACAGATTAAGAGGGGTCACCAACTCATTCCATCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RVEGLPSWHWVAVFP*GYRLRGVTNSFHLL Trigger: GAGCAGATGGAATGAGTTGGTGACCCCTCTTAATCTGTAGCCTCAGGGAAACACGGCTACCCAATGCCAAGATGGTAAACCCTCAACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR TCA 90 bp | TATAACACTGACCACATGGCCCAAGGTTCCATTCTTTGGAATCCGTaGGGCCAAGAACCCCAGGTCAGAGAACAAAAGGCTTGCTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: YNTDHMAQGSILWNP*GQEPQVREQKACCH Trigger: ATGGCAGCAAGCCTTTTGTTCTCTGACCTGGGGTTCTTGGCCTCACGGATTCCAAAGAATGGAACCTTGGGCCATGTGGTCAGTGTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR GCA 90 bp | TGTAATTTTTGTTTCTCTCACCTTCAATGTCACTGGCAAACATACTaGCTACCAGCTACTCCTCAGCCTTACACCTTAAGCATACGTCCT | + |
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Preference number: 1 (lower is better) Translates to: CNFCFSHLQCHWQTY*LPATPQPYTLSIRP Trigger: AGGACGTATGCTTAAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAACAAAAATTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR CAA 90 bp | GAGGCCAAGAACCCCAGGTCAGAGAACAAAAGGCTTGCTGCCATCTaGGGAGTGGCCACCACCATCTTGGGAGCTCTAAGAACAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: EAKNPRSENKRLAAI*GVATTILGALRTKA Trigger: GGCCTTTGTTCTTAGAGCTCCCAAGATGGTGGTGGCCACTCCCAAGATGGCAGCAAGCCTTTTGTTCTCTGACCTGGGGTTCTTGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR-3UTR TCA 90 bp | ACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTAAGCATACGTCCTGATGGGAGTTTGTATCTTTaGGACAGAACCCACACAGAC | + |
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Preference number: 2 (lower is better) Translates to: TYCLPATPQPYTLSIRPDGSLYL*DRTHTD Trigger: GTCTGTGTGGGTTCTGTCTCAAAGATACAAACTCCC...ATCAGGACGTATGCTTAAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR-3UTR CCA 90 bp | ACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTAAGCATACGTCCTGATGAGGGTTTACCATCTTaGCATTGGGTAGCCGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: TYCLPATPQPYTLSIRPDEGLPS*HWVAVF Trigger: AAACACGGCTACCCAATGCCAAGATGGTAAACCCTC...ATCAGGACGTATGCTTAAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR-3UTR TCA 90 bp | TCAATGTCACTGGCAAACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTTCTTACTCTTCGAGTTaGGGGTTTACCATCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SMSLANILPTSYSSALHLSYSSS*GFTILA Trigger: TGCCAAGATGGTAAACCCTCAACTCGAAGAGTAAGA...AAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTACTCCTCGACTCAGTTTCTCTATaGAGTCCTTGTTTCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VSLTFNVTGKHTAYQLLLDSVSL*SPCFLP Trigger: TGGCAGGAAACAAGGACTGCATAGAGAAACTGAGTC...GAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR-3UTR CCA 90 bp | ATCTGCTCTCATCTCGGCAGAGCAGGCCTACAGGTCAATCCCATTCCACTTGTGAACAGTAACAAGGCCTaGATGAAAAGATCACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: ICSHLGRAGLQVNPIPLVNSNKA*MKRSLK Trigger: TTTCAGTGATCTTTTCATCCAGGCCTTGTTACTGTT...CACAAGTGGAATGGGATTGACCTGTAGGCCTGCTCTGCCGAGATGAGAGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR-3UTR TCA 90 bp | TTTACCATCTTGGCATTGGGTAGCCGTGTTTCCCTGAGGCTACAGATTAAGAGGTTGTGCATTTCATTCTaGTCTGTAACAGTAACAAGG | + |
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Preference number: 2 (lower is better) Translates to: FTILALGSRVSLRLQIKRLCISF*SVTVTR Trigger: CCTTGTTACTGTTACAGATCAGAATGAAATGCACAA...CCTCTTAATCTGTAGCCTCAGGGAAACACGGCTACCCAATGCCAAGATGGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR TCA 72 bp | GGTTTACCATCTTGGCATTGGGTAGCCGTGTTTCCCTaGGGCTACAGATTAAGAGGGGTCACCAACTCATTC | + |
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Preference number: 3 (lower is better) Translates to: GLPSWHWVAVFP*GYRLRGVTNSF Trigger: GAATGAGTTGGTGACCCCTCTTAATCTGTAGCCTCAGGGAAACACGGCTACCCAATGCCAAGATGGTAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR CCA 72 bp | CCCATGACTTCTACTAGAGCTATAACACTGACCACATaGCCCAAGGTTCCATTCTTTGGAATCCGTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: PMTSTRAITLTT*PKVPFFGIREA Trigger: GGCCTCACGGATTCCAAAGAATGGAACCTTGGGCCATGTGGTCAGTGTTATAGCTCTAGTAGAAGTCATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR-3UTR CAA 90 bp | TCAATGTCACTGGCAAACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTAGGGAGTTTGTATCTTaGAGACAGAACCCACACAGA | + |
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Preference number: 3 (lower is better) Translates to: SMSLANILPTSYSSALHLREFVS*RQNPHR Trigger: TCTGTGTGGGTTCTGTCTCAAAGATACAAACTCCCT...AAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR GCA 72 bp | TGTTTCTCTCACCTTCAATGTCACTGGCAAACATACTaGCTACCAGCTACTCCTCAGCCTTACACCTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: CFSHLQCHWQTY*LPATPQPYTLS Trigger: GCTTAAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR GCA 90 bp | ATCTGCTCTCATCTCGGCAGAGCAGGCCTACAGGTCAATCCCATTCCACTTGTGCGGGCCCCACCGCCCTaGAAGGGACCGGCCATAACC | + |
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Preference number: 4 (lower is better) Translates to: ICSHLGRAGLQVNPIPLVRAPPP*KGPAIT Trigger: GGTTATGGCCGGTCCCTTGCAGGGCGGTGGGGCCCG...CACAAGTGGAATGGGATTGACCTGTAGGCCTGCTCTGCCGAGATGAGAGCAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR CAA 72 bp | GTGAGGCCAAGAACCCCAGGTCAGAGAACAAAAGGCTaGCTGCCATCTTGGGAGTGGCCACCACCATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VRPRTPGQRTKG*LPSWEWPPPSW Trigger: CCAAGATGGTGGTGGCCACTCCCAAGATGGCAGCAAGCCTTTTGTTCTCTGACCTGGGGTTCTTGGCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | GCATTGGGTAGCCGTGTTTCCCTGAGGCTACAGATTAAGAGGGGTCACCAACTCGATTCGGCTTTAAGTTaGCCAGGCTCACACGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: ALGSRVSLRLQIKRGHQLDSALS*PGSHAA Trigger: TGCCGCGTGTGAGCCTGGCCAACTTAAAGCCGAATC...GAGTTGGTGACCCCTCTTAATCTGTAGCCTCAGGGAAACACGGCTACCCAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| 3UTR CAA 72 bp | AACCCCAGGTCAGAGAACAAAAGGCTTGCTGCCATCTaGGGAGTGGCCACCACCATCTTGGGAGCTCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: NPRSENKRLAAI*GVATTILGALR Trigger: TCTTAGAGCTCCCAAGATGGTGGTGGCCACTCCCAAGATGGCAGCAAGCCTTTTGTTCTCTGACCTGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR TCA 90 bp | ATCTGCTCTCATCTCGGCAGAGCAGGCCTACAGGTCAATCCCATTCCACTTGTGGTAGCCGTGTTTCCCTaGGGCTACAGATTAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ICSHLGRAGLQVNPIPLVVAVFP*GYRLRG Trigger: CCCTCTTAATCTGTAGCCTCAGGGAAACACGGCTAC...CACAAGTGGAATGGGATTGACCTGTAGGCCTGCTCTGCCGAGATGAGAGCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR GCA 90 bp | ATCTGCTCTCATCTCGGCAGAGCAGGCCTACAGGTCAATCCCATTCCACTTGTGGAACAAAAGGCTTGCTaGCATCTTGGGAGTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ICSHLGRAGLQVNPIPLVEQKAC*HLGSGH Trigger: GTGGCCACTCCCAAGATGGCAGCAAGCCTTTTGTTC...CACAAGTGGAATGGGATTGACCTGTAGGCCTGCTCTGCCGAGATGAGAGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | GCATACGTCCTGATCTTACTCTTCGAGTTGAGGGTTTACCATCTTGGCATTGGGGGCTTGCTGCCATCTTaGGAGTGGCCACCACCATCT | + |
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Preference number: 4 (lower is better) Translates to: AYVLILLFELRVYHLGIGGLLPS*EWPPPS Trigger: AGATGGTGGTGGCCACTCCCAAGATGGCAGCAAGCC...CCCAATGCCAAGATGGTAAACCCTCAACTCGAAGAGTAAGATCAGGACGTATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR TCA 90 bp | GCATTGGGTAGCCGTGTTTCCCTGAGGCTACAGATTAAGAGGGGTCACCAACTCGGGAGTTTGTATCTTTaGGACAGAACCCACACAGAC | + |
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Preference number: 4 (lower is better) Translates to: ALGSRVSLRLQIKRGHQLGSLYL*DRTHTD Trigger: GTCTGTGTGGGTTCTGTCTCAAAGATACAAACTCCC...GAGTTGGTGACCCCTCTTAATCTGTAGCCTCAGGGAAACACGGCTACCCAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | ATCTGCTCTCATCTCGGCAGAGCAGGCCTACAGGTCAATCCCATTCCACTTGTGGAGGGTTTACCATCTTaGCATTGGGTAGCCGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: ICSHLGRAGLQVNPIPLVEGLPS*HWVAVF Trigger: AAACACGGCTACCCAATGCCAAGATGGTAAACCCTC...CACAAGTGGAATGGGATTGACCTGTAGGCCTGCTCTGCCGAGATGAGAGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR GCA 90 bp | ACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTAAGCATACGTCCTGATCCAACTCATTCCATCTaGTCTCATCTCGGCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: TYCLPATPQPYTLSIRPDPTHSI*SHLGRA Trigger: TGCTCTGCCGAGATGAGAGCAGATGGAATGAGTTGG...ATCAGGACGTATGCTTAAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR GCA 90 bp | TCAATGTCACTGGCAAACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTCACTGGCAAACATACTaGCTACCAGCTACTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: SMSLANILPTSYSSALHLHWQTY*LPATPQ Trigger: CTGAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTG...AAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR GCA 90 bp | TCAATGTCACTGGCAAACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTAGAGAACAAAAGGCTTaGTGCCATCTTGGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SMSLANILPTSYSSALHLREQKA*CHLGSG Trigger: GCCACTCCCAAGATGGCAGCAAGCCTTTTGTTCTCT...AAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | GCATACGTCCTGATCTTACTCTTCGAGTTGAGGGTTTACCATCTTGGCATTGGGTTCTCTCCGGTTTCTTaGAGCCGGGATTCGGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: AYVLILLFELRVYHLGIGFSPVS*SRDSAL Trigger: TAAAGCCGAATCCCGGCTCCAAGAAACCGGAGAGAA...CCCAATGCCAAGATGGTAAACCCTCAACTCGAAGAGTAAGATCAGGACGTATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR TCA 90 bp | ACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTAAGCATACGTCCTGATTCTTACTCTTCGAGTTaGGGGTTTACCATCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: TYCLPATPQPYTLSIRPDSYSSS*GFTILA Trigger: TGCCAAGATGGTAAACCCTCAACTCGAAGAGTAAGA...ATCAGGACGTATGCTTAAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR GCA 90 bp | ACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTAAGCATACGTCCTGATGACTCAGTTTCTCTATaGAGTCCTTGTTTCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TYCLPATPQPYTLSIRPDDSVSL*SPCFLP Trigger: TGGCAGGAAACAAGGACTGCATAGAGAAACTGAGTC...ATCAGGACGTATGCTTAAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | TTCTTTGGAATCCGTGAGGCCAAGAACCCCAGGTCAGAGAACAAAAGGCTTGCTTATAACCATACTTCCTaGCGAGTTCAAGTCGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: FFGIREAKNPRSENKRLAYNHTS*RVQVVL Trigger: AAGCACGACTTGAACTCGCCAGGAAGTATGGTTATA...AGCAAGCCTTTTGTTCTCTGACCTGGGGTTCTTGGCCTCACGGATTCCAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | GCATTGGGTAGCCGTGTTTCCCTGAGGCTACAGATTAAGAGGGGTCACCAACTCAACAGTAACAAGGCCTaGATGAAAAGATCACTGAAA | + |
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Preference number: 4 (lower is better) Translates to: ALGSRVSLRLQIKRGHQLNSNKA*MKRSLK Trigger: TTTCAGTGATCTTTTCATCCAGGCCTTGTTACTGTT...GAGTTGGTGACCCCTCTTAATCTGTAGCCTCAGGGAAACACGGCTACCCAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR TCA 90 bp | CCTGATCTTACTCTTCGAGTTGAGGGTTTACCATCTTGGCATTGGGTAGCCGTGTTGGACGGGAATTCATaGGGTATAATACTTAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PDLTLRVEGLPSWHWVAVLDGNS*GIILKE Trigger: CTCCTTAAGTATTATACCTCATGAATTCCCGTCCAA...CACGGCTACCCAATGCCAAGATGGTAAACCCTCAACTCGAAGAGTAAGATCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR GCA 90 bp | CACTGGCAAACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTAAGCATAGTACCCACGGTTCTTTaGATCAGTGTAATATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: HWQTYCLPATPQPYTLSIVPTVL*ISVIWY Trigger: GTACCATATTACACTGATGCAAAGAACCGTGGGTAC...TATGCTTAAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | GCATACGTCCTGATCTTACTCTTCGAGTTGAGGGTTTACCATCTTGGCATTGGGCTCAAAGGCTTATACTaGCGTCTGAAACTATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: AYVLILLFELRVYHLGIGLKGLY*RLKLCP Trigger: AGGACATAGTTTCAGACGCCAGTATAAGCCTTTGAG...CCCAATGCCAAGATGGTAAACCCTCAACTCGAAGAGTAAGATCAGGACGTATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | TCAATGTCACTGGCAAACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTATTCACCACCCATCCTaGAGCAAGACCAAAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: SMSLANILPTSYSSALHLIHHPS*SKTKEN Trigger: ATTTTCTTTGGTCTTGCTCCAGGATGGGTGGTGAAT...AAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | GTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTACTCCTCGCATTCTTTTTGGAATaGGTTGTCCACGAAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: VSLTFNVTGKHTAYQLLLAFFLE*VVHEER Trigger: TCTTTCTTCGTGGACAACCCATTCCAAAAAGAATGC...GAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR TCA 90 bp | GCATACGTCCTGATCTTACTCTTCGAGTTGAGGGTTTACCATCTTGGCATTGGGTTGTGCATTTCATTCTaGTCTGTAACAGTAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: AYVLILLFELRVYHLGIGLCISF*SVTVTR Trigger: CCTTGTTACTGTTACAGATCAGAATGAAATGCACAA...CCCAATGCCAAGATGGTAAACCCTCAACTCGAAGAGTAAGATCAGGACGTATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | ATTTTTGTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTACACCTTCAATGTCACTaGCAAACATACTGCCTACCA | + |
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Preference number: 4 (lower is better) Translates to: IFVSLTFNVTGKHTAYQLHLQCH*QTYCLP Trigger: TGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTG...TAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAACAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | ATTTTTGTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTATGCATCAGTGTAATATaGTACCAGTTCTTCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IFVSLTFNVTGKHTAYQLCISVI*YQFFWW Trigger: CCACCAGAAGAACTGGTACCATATTACACTGATGCA...TAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAACAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | ATTTTTGTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTAATAACACTGACCACATaGCCCAAGGTTCCATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: IFVSLTFNVTGKHTAYQLITLTT*PKVPFF Trigger: AAAGAATGGAACCTTGGGCCATGTGGTCAGTGTTAT...TAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAACAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CCA 90 bp | TTTTGTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTACTGTTAAACCCGTATTTTaGGATTCGGATGTAAAATGG | + |
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Preference number: 4 (lower is better) Translates to: FCFSHLQCHWQTYCLPATVKPVF*DSDVKW Trigger: CCATTTTACATCCGAATCCCAAAATACGGGTTTAAC...AGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS GCA 90 bp | CGCGGCAGGCCCCGGAGTAGGTCCAGGGCCCGGGCCCCACCGCCCTaGAAGGGACCGGCCATAACCCGCAGATCCAAGAACTTTCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: RGRPRSRSRARAPPP*KGPAITRRSKNFQG Trigger: CCCTTGAAAGTTCTTGGATCTGCGGGTTATGGCCGGTCCCTTGCAGGGCGGTGGGGCCCGGGCCCTGGACCTACTCCGGGGCCTGCCGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS CCA 90 bp | TTGGTCTTCTCTCCGGTTTCTTGGAGCCGGGATTCGGCTTTAAGTTaGCCAGGCTCACACGCGGCAGGCCCCGGAGTAGGTCCAGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LVFSPVSWSRDSALS*PGSHAAGPGVGPGP Trigger: GGGCCCTGGACCTACTCCGGGGCCTGCCGCGTGTGAGCCTGGCCAACTTAAAGCCGAATCCCGGCTCCAAGAAACCGGAGAGAAGACCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260102.9 ENST00000519831.5 |
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| CDS-3UTR CAA 90 bp | GGCCAAGAACCCCAGGTCAGAGAACAAAAGGCTTGCTGCCATCTTGGGAGTGGCAGGCTTGCTGCCATCTaGGGAGTGGCCACCACCATC | + |
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Preference number: 5 (lower is better) Translates to: GQEPQVREQKACCHLGSGRLAAI*GVATTI Trigger: GATGGTGGTGGCCACTCCCAAGATGGCAGCAAGCCT...GCCACTCCCAAGATGGCAGCAAGCCTTTTGTTCTCTGACCTGGGGTTCTTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CAA 90 bp | ACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTAAGCATACGTCCTGATGGGCCGGGTTCCTCTTaGCCTTTCTCCTTTATGGCC | + |
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Preference number: 5 (lower is better) Translates to: TYCLPATPQPYTLSIRPDGPGSS*PFSFMA Trigger: GGCCATAAAGGAGAAAGGCAAAGAGGAACCCGGCCC...ATCAGGACGTATGCTTAAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CAA 90 bp | GTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTACTCCTCCTTCTCTCCGGTTTCTaGGAGCCGGGATTCGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: VSLTFNVTGKHTAYQLLLLLSGF*EPGFGF Trigger: AAAGCCGAATCCCGGCTCCAAGAAACCGGAGAGAAG...GAGGAGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CAA 90 bp | ACATACTGCCTACCAGCTACTCCTCAGCCTTACACCTTAAGCATACGTCCTGATCAGAGAACAAAAGGCTaGCTGCCATCTTGGGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: TYCLPATPQPYTLSIRPDQRTKG*LPSWEW Trigger: CCACTCCCAAGATGGCAGCAAGCCTTTTGTTCTCTG...ATCAGGACGTATGCTTAAGGTGTAAGGCTGAGGAGTAGCTGGTAGGCAGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CAA 90 bp | ATTTTTGTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTAGGATTCGGCTTTAAGTaGGCCAGGCTCACACGCGGC | + |
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Preference number: 5 (lower is better) Translates to: IFVSLTFNVTGKHTAYQLGFGFK*ARLTRG Trigger: GCCGCGTGTGAGCCTGGCCAACTTAAAGCCGAATCC...TAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAACAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CAA 90 bp | GGCAGAGCAGGCCTACAGGTCAATCCCATTCCACTTGTGCATTTCATTCTGATCAGGGAGTTTGTATCTTaGAGACAGAACCCACACAGA | + |
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Preference number: 5 (lower is better) Translates to: GRAGLQVNPIPLVHFILIREFVS*RQNPHR Trigger: TCTGTGTGGGTTCTGTCTCAAAGATACAAACTCCCT...GATCAGAATGAAATGCACAAGTGGAATGGGATTGACCTGTAGGCCTGCTCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CAA 90 bp | CCTGATCTTACTCTTCGAGTTGAGGGTTTACCATCTTGGCATTGGGTAGCCGTGATCTTACTCTTCGAGTaGAGGGTTTACCATCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: PDLTLRVEGLPSWHWVAVILLFE*RVYHLG Trigger: GCCAAGATGGTAAACCCTCAACTCGAAGAGTAAGAT...CACGGCTACCCAATGCCAAGATGGTAAACCCTCAACTCGAAGAGTAAGATCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS CCA 90 bp | CTTATACTGGCGTCTGAAACTATGTCCTTCGTTAAACCCGTATTTTaGGATTCGGATGTAAAATGGAGTCTGGCCTCCCTCAAAGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LILASETMSFVKPVF*DSDVKWSLASLKAQ Trigger: TTGGGCTTTGAGGGAGGCCAGACTCCATTTTACATCCGAATCCCAAAATACGGGTTTAACGAAGGACATAGTTTCAGACGCCAGTATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000260102.9 ENST00000519831.5 |
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| CDS CCA 90 bp | CTTATACTGGCGTCTGAAACTATGTCCTTCGTTAAACCCGTATTTTaGGATTCGGATGTAAAATGGAGTCTGGCCTCTTCTCCGACCTCT | + |
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Preference number: 5 (lower is better) Translates to: LILASETMSFVKPVF*DSDVKWSLASSPTS Trigger: AGAGGTCGGAGAAGAGGCCAGACTCCATTTTACATCCGAATCCCAAAATACGGGTTTAACGAAGGACATAGTTTCAGACGCCAGTATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522521.2 |
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| CDS-3UTR CAA 90 bp | ATTTTTGTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTAGTGGCCACCACCATCTaGGGAGCTCTAAGAACAAAG | + |
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Preference number: 5 (lower is better) Translates to: IFVSLTFNVTGKHTAYQLVATTI*GALRTK Trigger: CTTTGTTCTTAGAGCTCCCAAGATGGTGGTGGCCAC...TAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAACAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CAA 90 bp | TTTTGTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTACTGGTACCCACGGTTCTTaGCATCAGTGTAATATGGTA | + |
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Preference number: 5 (lower is better) Translates to: FCFSHLQCHWQTYCLPATGTHGS*HQCNMV Trigger: TACCATATTACACTGATGCAAAGAACCGTGGGTACC...AGTAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS-3UTR CAA 90 bp | ATTTTTGTTTCTCTCACCTTCAATGTCACTGGCAAACATACTGCCTACCAGCTACTAGTACAGAGCATTTaGAAGAGTTCATCTTTAGTG | + |
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Preference number: 5 (lower is better) Translates to: IFVSLTFNVTGKHTAYQLLVQSI*KSSSLV Trigger: CACTAAAGATGAACTCTTCAAAATGCTCTGTACTAG...TAGCTGGTAGGCAGTATGTTTGCCAGTGACATTGAAGGTGAGAGAAACAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS GCA 72 bp | CCCCGGAGTAGGTCCAGGGCCCGGGCCCCACCGCCCTaGAAGGGACCGGCCATAACCCGCAGATCCAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: PRSRSRARAPPP*KGPAITRRSKN Trigger: GTTCTTGGATCTGCGGGTTATGGCCGGTCCCTTGCAGGGCGGTGGGGCCCGGGCCCTGGACCTACTCCGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260102.9 |
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| CDS CAA 72 bp | CTCTCCGGTTTCTTGGAGCCGGGATTCGGCTTTAAGTaGGCCAGGCTCACACGCGGCAGGCCCCGGAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: LSGFLEPGFGFK*ARLTRGRPRSR Trigger: CCTACTCCGGGGCCTGCCGCGTGTGAGCCTGGCCAACTTAAAGCCGAATCCCGGCTCCAAGAAACCGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260102.9 ENST00000519831.5 |
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| CDS CAA 90 bp | CTTGGTCTTCTCTCCGGTTTCTTGGAGCCGGGATTCGGCTTTAAGTaGGCCAGGCTCACACGCGGCAGGCCCCGGAGTAGGTCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LGLLSGFLEPGFGFK*ARLTRGRPRSRSRA Trigger: GGCCCTGGACCTACTCCGGGGCCTGCCGCGTGTGAGCCTGGCCAACTTAAAGCCGAATCCCGGCTCCAAGAAACCGGAGAGAAGACCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260102.9 ENST00000519831.5 |
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| CDS CCA 72 bp | TCTCCGGTTTCTTGGAGCCGGGATTCGGCTTTAAGTTaGCCAGGCTCACACGCGGCAGGCCCCGGAGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: SPVSWSRDSALS*PGSHAAGPGVG Trigger: ACCTACTCCGGGGCCTGCCGCGTGTGAGCCTGGCCAACTTAAAGCCGAATCCCGGCTCCAAGAAACCGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000260102.9 ENST00000519831.5 |
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| CDS CCA 72 bp | GCGTCTGAAACTATGTCCTTCGTTAAACCCGTATTTTaGGATTCGGATGTAAAATGGAGTCTGGCCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: ASETMSFVKPVF*DSDVKWSLASL Trigger: GAGGGAGGCCAGACTCCATTTTACATCCGAATCCCAAAATACGGGTTTAACGAAGGACATAGTTTCAGACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000260102.9 ENST00000519831.5 |
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| CDS CCA 72 bp | GCGTCTGAAACTATGTCCTTCGTTAAACCCGTATTTTaGGATTCGGATGTAAAATGGAGTCTGGCCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ASETMSFVKPVF*DSDVKWSLASS Trigger: AGAAGAGGCCAGACTCCATTTTACATCCGAATCCCAAAATACGGGTTTAACGAAGGACATAGTTTCAGACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000522521.2 |
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