RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRNIP (Homo sapiens)

Ensembl gene IDs: ENSG00000161010

Ensembl transcript IDs: ENST00000292586.11, ENST00000376931.6, ENST00000517338.1, ENST00000518219.5, ENST00000518235.5, ENST00000519208.5, ENST00000519213.1, ENST00000519318.5, ENST00000519398.1, ENST00000520150.5, ENST00000520698.5, ENST00000520995.5, ENST00000521299.5, ENST00000521675.1, ENST00000522157.5, ENST00000522663.5, ENST00000523084.5, ENST00000523267.1, ENST00000523737.5, ENST00000523835.5, ENST00000524068.5, ENST00000610475.4, ENST00000638169.1, ENST00000638399.1, ENST00000638405.1, ENST00000638829.1, ENST00000639025.1, ENST00000639215.1, ENST00000639381.1, ENST00000639532.1, ENST00000639632.2, ENST00000639686.1, ENST00000639837.1, ENST00000639865.1, ENST00000639933.1, ENST00000640189.1, ENST00000640320.1, ENST00000640611.1, ENST00000640658.1, ENST00000640690.1, ENST00000640706.1, ENST00000640767.1, ENST00000640912.1, ENST00000640942.1

Found 1437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCAC +
Preference number: 1 (lower is better)
Translates to: CPFWGPQATSEPPES*TPRLHGGWTVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
3UTR GCA 90 bp CTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCAC +
Preference number: 1 (lower is better)
Translates to: LTFWGPQATSEPPES*TPRLHGGWTVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR GCA 90 bp CTGGCTCCTTGCAGCAGGGCTGGGCCTGCGAGACCCAAGGCTCACTaGAGCGCGCTCCTGACCCCTCCCTGCAGGGGCTACGTTAGCAGC +
Preference number: 1 (lower is better)
Translates to: LAPCSRAGPARPKAH*SALLTPPCRGYVSS
Trigger: GCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTGCTGCAAGGAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR TCA 90 bp GCAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCT +
Preference number: 1 (lower is better)
Translates to: AGLGLRDPRLTAARS*PLPAGATLAAQHIA
Trigger: AGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR CCA 90 bp CCCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTaGGAGGCTAAGGCAGGCAGCTGGGAGGTGGAGGTTGTAGCGAGC +
Preference number: 1 (lower is better)
Translates to: PRRGGGRAEAAISAL*EAKAGSWEVEVVAS
Trigger: GCTCGCTACAACCTCCACCTCCCAGCTGCCTGCCTTAGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR TCA 90 bp CCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTTaGGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTGCTGGACC +
Preference number: 1 (lower is better)
Translates to: PRKLDSGSGPAEAFS*GLCSGGPLLSLCWT
Trigger: GGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
3UTR TCA 90 bp TTGCGTCCCATGAGGTCTTCCCGCAAGGCCTCTCAGACCCAGATGTaGCGGGGTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCC +
Preference number: 1 (lower is better)
Translates to: LRPMRSSRKASQTQM*RGVWPEEAGQRQWA
Trigger: GGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCACACACCCCGTCACATCTGGGTCTGAGAGGCCTTGCGGGAAGACCTCATGGGACGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR TCA 90 bp TGCGAGTGTGGAGGGAAGCATCTCCCAGGATTCAGGGCGGCCCGCTaGCGACTCCTGCCCGGACAAAGGTCCCCGTGCTCCACGCAGAAT +
Preference number: 1 (lower is better)
Translates to: CECGGKHLPGFRAAR*RLLPGQRSPCSTQN
Trigger: ATTCTGCGTGGAGCACGGGGACCTTTGTCCGGGCAGGAGTCGTCAGCGGGCCGCCCTGAATCCTGGGAGATGCTTCCCTCCACACTCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR TCA 90 bp TCAGTCGTGGCGGCGCGCACCTGCAATCGCAGGCACTCGGCAGGCTaGGGCAAGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGG +
Preference number: 1 (lower is better)
Translates to: SVVAARTCNRRHSAG*GKRIRQGGCSEPRW
Trigger: CCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCTTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGTGCGCGCCGCCACGACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR GCA 90 bp GAGGGAAGCATCTCCCAGGATTCAGGGCGGCCCGCTGACGACTCCTaGCCGGACAAAGGTCCCCGTGCTCCACGCAGAATGAGACGATGG +
Preference number: 1 (lower is better)
Translates to: EGSISQDSGRPADDS*PDKGPRAPRRMRRW
Trigger: CCATCGTCTCATTCTGCGTGGAGCACGGGGACCTTTGTCCGGGCAGGAGTCGTCAGCGGGCCGCCCTGAATCCTGGGAGATGCTTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 90 bp GGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTGCTGGACCAGCTaGCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCAC +
Preference number: 1 (lower is better)
Translates to: GLCSGGPLLSLCWTS*PGVPLKRPWLLTVH
Trigger: GTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGCCAGCTGGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGCACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
3UTR CCA 90 bp GGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTTCCTGGGTGCCCTaGCTCCTTGCAGCAGGGCTGGGCCTGCGAGACCCAAGGCTCACT +
Preference number: 1 (lower is better)
Translates to: GRVPVCVCADVSWVP*LLAAGLGLRDPRLT
Trigger: AGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTGCTGCAAGGAGCCAGGGCACCCAGGAAACATCAGCACACACACACACAGGGACCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR CCA 90 bp GAGAGCTCTGGGCAGGCTCGGACACTGGCAGACCCTGGTCCTGGCTaGCCAAGGCAGCAGGGTATGTGTTTCGGGTCACTCACAGGGCTC +
Preference number: 1 (lower is better)
Translates to: ESSGQARTLADPGPG*PRQQGMCFGSLTGL
Trigger: GAGCCCTGTGAGTGACCCGAAACACATACCCTGCTGCCTTGGCCAGCCAGGACCAGGGTCTGCCAGTGTCCGAGCCTGCCCAGAGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CCA 90 bp GGACGAGAGCTCTGGGCAGGCTCGGACACTGGCAGACCCTGGTCCTaGCTGGCCAAGGCAGCAGGGTATGTGTTTCGGGTCACTCACAGG +
Preference number: 1 (lower is better)
Translates to: GRELWAGSDTGRPWS*LAKAAGYVFRVTHR
Trigger: CCTGTGAGTGACCCGAAACACATACCCTGCTGCCTTGGCCAGCCAGGACCAGGGTCTGCCAGTGTCCGAGCCTGCCCAGAGCTCTCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CCA 90 bp CCACTGTGGCCTGTGAGGACGAGAGCTCTGGGCAGGCTCGGACACTaGCAGACCCTGGTCCTGGCTGGCCAAGGCAGCAGGGTATGTGTT +
Preference number: 1 (lower is better)
Translates to: PLWPVRTRALGRLGH*QTLVLAGQGSRVCV
Trigger: AACACATACCCTGCTGCCTTGGCCAGCCAGGACCAGGGTCTGCCAGTGTCCGAGCCTGCCCAGAGCTCTCGTCCTCACAGGCCACAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CCA 90 bp TCAGACGATGGGTGGCCGGGCAGAGACGCTCCTCACTTTCCAGACTaGGCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATGGGCG +
Preference number: 1 (lower is better)
Translates to: SDDGWPGRDAPHFPD*AARQRGSSHSRRWA
Trigger: CGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCACCCATCGTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR GCA 90 bp CCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATGTCAGGCCAGCCTGTCCCTTCTGGG +
Preference number: 1 (lower is better)
Translates to: PRHCSLQSSPGGRGC*LVSPSMSGQPVPSG
Trigger: CCCAGAAGGGACAGGCTGGCCTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
3UTR TCA 90 bp AGACTGCTTGGCCCTTTACAGGGAAAGCAGGTCCACTGTGGCCTGTaGGGACGAGAGCTCTGGGCAGGCTCGGACACTGGCAGACCCTGG +
Preference number: 1 (lower is better)
Translates to: RLLGPLQGKQVHCGL*GRELWAGSDTGRPW
Trigger: CCAGGGTCTGCCAGTGTCCGAGCCTGCCCAGAGCTCTCGTCCTCACAGGCCACAGTGGACCTGCTTTCCCTGTAAAGGGCCAAGCAGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR GCA 90 bp TCCATGTGTAAGAACAATGCCAGGGCCCAGGAGGACCGCCTGCCCTaGCTGGGCCTTGGCTGGGCCTCTGGTTCTGACACTTTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: SMCKNNARAQEDRLP*LGLGWASGSDTFCW
Trigger: CCAGCAGAAAGTGTCAGAACCAGAGGCCCAGCCAAGGCCCAGGCAGGGCAGGCGGTCCTCCTGGGCCCTGGCATTGTTCTTACACATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 90 bp GCAGAGGCTGCAATCTCGGCACTTTGGGAGGCTAAGGCAGGCAGCTaGGAGGTGGAGGTTGTAGCGAGCCGAGATCACGCCACTGCACTC +
Preference number: 1 (lower is better)
Translates to: AEAAISALWEAKAGS*EVEVVASRDHATAL
Trigger: GAGTGCAGTGGCGTGATCTCGGCTCGCTACAACCTCCACCTCCCAGCTGCCTGCCTTAGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR GCA 90 bp CCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATGTCAGGCCAGCCTGTCCCTGAAAGA +
Preference number: 1 (lower is better)
Translates to: PRHCSLQSSPGGRGC*LVSPSMSGQPVPER
Trigger: TCTTTCAGGGACAGGCTGGCCTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 90 bp CAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTaGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCA +
Preference number: 1 (lower is better)
Translates to: QWSLGPERNCLSLTF*GPQATSEPPESCTP
Trigger: TGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR TCA 90 bp CCGGACAAAGGTCCCCGTGCTCCACGCAGAATGAGACGATGGCCCTaGCCCATCGTCAGGTTGACCTGCTGGCCAACCTCAGTTTCTCCA +
Preference number: 1 (lower is better)
Translates to: PDKGPRAPRRMRRWP*PIVRLTCWPTSVSP
Trigger: TGGAGAAACTGAGGTTGGCCAGCAGGTCAACCTGACGATGGGTCAGGGCCATCGTCTCATTCTGCGTGGAGCACGGGGACCTTTGTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR TCA 90 bp CACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTaGCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCT +
Preference number: 1 (lower is better)
Translates to: HTLSGHWDQRETVCH*PSGVPRRPQSHPSP
Trigger: AGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR GCA 90 bp AGTTTGAATTCTGCTTCTTGGCATGAGCCAGTGCTCTGTGCGTGGTaGAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGTGGGGG +
Preference number: 1 (lower is better)
Translates to: SLNSASWHEPVLCAW*KASGDRPWLMWGWG
Trigger: CCCCCACCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACTGGCTCATGCCAAGAAGCAGAATTCAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 90 bp ACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTGGACTaGAAGCTTCAAGAACAAGACAAATGGGCCAGGCGCAGTGGCCCA +
Preference number: 1 (lower is better)
Translates to: TLHSAALDMRWGLLD*KLQEQDKWARRSGP
Trigger: TGGGCCACTGCGCCTGGCCCATTTGTCTTGTTCTTGAAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 90 bp AGAGTGCCTCACATACAAGAGTCCACAGCAGGGCAAATGCGAGTGTaGAGGGAAGCATCTCCCAGGATTCAGGGCGGCCCGCTGACGACT +
Preference number: 1 (lower is better)
Translates to: RVPHIQESTAGQMRV*REASPRIQGGPLTT
Trigger: AGTCGTCAGCGGGCCGCCCTGAATCCTGGGAGATGCTTCCCTCCACACTCGCATTTGCCCTGCTGTGGACTCTTGTATGTGAGGCACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 90 bp GTGAAAAAGACTGCTTGGCCCTTTACAGGGAAAGCAGGTCCACTGTaGCCTGTGAGGACGAGAGCTCTGGGCAGGCTCGGACACTGGCAG +
Preference number: 1 (lower is better)
Translates to: VKKTAWPFTGKAGPL*PVRTRALGRLGHWQ
Trigger: CTGCCAGTGTCCGAGCCTGCCCAGAGCTCTCGTCCTCACAGGCCACAGTGGACCTGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR GCA 90 bp CAGAGCAAACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTaGTGGACTGGAAGCTTCAAGAACAAGACAAATGGGCCAGGCGCA +
Preference number: 1 (lower is better)
Translates to: QSKPCTLQHWICGGA*WTGSFKNKTNGPGA
Trigger: TGCGCCTGGCCCATTTGTCTTGTTCTTGAAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGTTTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 90 bp AGCAAACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTaGACTGGAAGCTTCAAGAACAAGACAAATGGGCCAGGCGCAGTG +
Preference number: 1 (lower is better)
Translates to: SKPCTLQHWICGGAC*TGSFKNKTNGPGAV
Trigger: CACTGCGCCTGGCCCATTTGTCTTGTTCTTGAAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 90 bp CAAAGTTTGAATTCTGCTTCTTGGCATGAGCCAGTGCTCTGTGCGTaGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGTGG +
Preference number: 1 (lower is better)
Translates to: QSLNSASWHEPVLCA*CKASGDRPWLMWGW
Trigger: CCACCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACTGGCTCATGCCAAGAAGCAGAATTCAAACTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR GCA 90 bp GCTGCCTGGTGTCGCAGTGGCAGAGTTGAGCAGTGTGAAAAAGACTaGTTGGCCCTTTACAGGGAAAGCAGGTCCACTGTGGCCTGTGAG +
Preference number: 1 (lower is better)
Translates to: AAWCRSGRVEQCEKD*LALYRESRSTVACE
Trigger: CTCACAGGCCACAGTGGACCTGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTGCTCAACTCTGCCACTGCGACACCAGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CCA 90 bp CCTGGTGTCGCAGTGGCAGAGTTGAGCAGTGTGAAAAAGACTGCTTaGCCCTTTACAGGGAAAGCAGGTCCACTGTGGCCTGTGAGGACG +
Preference number: 1 (lower is better)
Translates to: PGVAVAELSSVKKTA*PFTGKAGPLWPVRT
Trigger: CGTCCTCACAGGCCACAGTGGACCTGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTGCTCAACTCTGCCACTGCGACACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR TCA 90 bp CTGGCCAACCTCAGTTTCTCCAAGGGTCACAATGCTCTTTGGTCCTaGGTTACCCTCATGGGAGACGAGAGGCATGGGAGGGAAAAGGGG +
Preference number: 1 (lower is better)
Translates to: LANLSFSKGHNALWS*VTLMGDERHGREKG
Trigger: CCCCTTTTCCCTCCCATGCCTCTCGTCTCCCATGAGGGTAACTCAGGACCAAAGAGCATTGTGACCCTTGGAGAAACTGAGGTTGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR GCA 90 bp TTACAAAGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTaGAGCACTGCCACCCAGGCAGTACAGAAGAGGCTCTGCGGCCCT +
Preference number: 1 (lower is better)
Translates to: LQREKQCESSDRVGP*STATQAVQKRLCGP
Trigger: AGGGCCGCAGAGCCTCTTCTGTACTGCCTGGGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCTTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 90 bp TGTGCTGCTTACAAAGGGAAAAGCAATGTGAAAGCAGCGATAGAGTaGGTCCCTGCAGCACTGCCACCCAGGCAGTACAGAAGAGGCTCT +
Preference number: 1 (lower is better)
Translates to: CAAYKGKSNVKAAIE*VPAALPPRQYRRGS
Trigger: AGAGCCTCTTCTGTACTGCCTGGGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCTTTGTAAGCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR TCA 90 bp CCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTaGACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGA +
Preference number: 1 (lower is better)
Translates to: PGVPLKRPWLLTVHM*TFSRWQDKLRPFRG
Trigger: TCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
3UTR TCA 90 bp GGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTaGGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTT +
Preference number: 1 (lower is better)
Translates to: GTEKAHEGHPQCWFH*ELPPGLFTTVVLSF
Trigger: AAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR CCA 90 bp CACAAAACTAGTTGGCGGCAACATCAAAGTTTGAATTCTGCTTCTTaGCATGAGCCAGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGAC +
Preference number: 1 (lower is better)
Translates to: HKTSWRQHQSLNSAS*HEPVLCAWCKASGD
Trigger: GTCTCCGCTGGCCTTGCACCACGCACAGAGCACTGGCTCATGCCAAGAAGCAGAATTCAAACTTTGATGTTGCCGCCAACTAGTTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 90 bp TCTGAGGGCTGCGATTTTTCCTGCTGCTTCACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCT +
Preference number: 1 (lower is better)
Translates to: SEGCDFSCCFTFPAC*CPTFSSSLALTVSS
Trigger: AGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCCCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000524068.5
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR CCA 90 bp TTTCAGTGTCCATTGATGGTTCTGCTTACACACCACCTGGCTGCCTaGTGTCGCAGTGGCAGAGTTGAGCAGTGTGAAAAAGACTGCTTG +
Preference number: 1 (lower is better)
Translates to: FQCPLMVLLTHHLAA*CRSGRVEQCEKDCL
Trigger: CAAGCAGTCTTTTTCACACTGCTCAACTCTGCCACTGCGACACCAGGCAGCCAGGTGGTGTGTAAGCAGAACCATCAATGGACACTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR TCA 90 bp GAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTCGTCAACTGTaGCAAAAGACAGAATTATCACACACACGCTCAGTGGTCACTGGG +
Preference number: 1 (lower is better)
Translates to: EDGLSAGRNRTLRQL*QKTELSHTRSVVTG
Trigger: CCCAGTGACCACTGAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
3UTR GCA 90 bp TGCTCACTGTCCACATGTGAACTTTTTCTAGGTGGCAGGACAAATTaGGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTC +
Preference number: 1 (lower is better)
Translates to: CSLSTCELFLGGRTN*AHLEDVAVTCWMGL
Trigger: GAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
3UTR CCA 90 bp TCACGAAGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCT +
Preference number: 1 (lower is better)
Translates to: SRRASAMLVSLRAAS*SLHHCSSLISKPSA
Trigger: AGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCTTCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR TCA 90 bp CTCAGTTCCTCACCTTTAAAACAAAGCAACAGGCTTGAGGGAGCATaGAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCC +
Preference number: 1 (lower is better)
Translates to: LSSSPLKQSNRLEGA*NTMIPLQHAAQGLA
Trigger: GGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCATGCTCCCTCAAGCCTGTTGCTTTGTTTTAAAGGTGAGGAACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR GCA 90 bp AGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTaGCAGTCCCAGATCACACATCATCATCGAAGTCTTCCCCAGTTA +
Preference number: 1 (lower is better)
Translates to: RGTLSLLTSVSRLIT*QSQITHHHRSLPQL
Trigger: TAACTGGGGAAGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR TCA 90 bp AACTGCAAGCCTCAGTTCCTCACCTTTAAAACAAAGCAACAGGCTTaGGGGAGCATGAAACACAATGATACCATTACAACATGCAGCCCA +
Preference number: 1 (lower is better)
Translates to: NCKPQFLTFKTKQQA*GSMKHNDTITTCSP
Trigger: TGGGCTGCATGTTGTAATGGTATCATTGTGTTTCATGCTCCCTCAAGCCTGTTGCTTTGTTTTAAAGGTGAGGAACTGAGGCTTGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp CTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCAGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 2 (lower is better)
Translates to: LGSPGDLRATRVLHATAAEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...TGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp CTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: LGSPGDLRATRVLHATAARLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...TGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp CGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: RVLHATAARRLDGAPAPLRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...AAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp CCAGACGGGGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTGGGAGGCTAGGCAGACCCTGGTCCTaGCTGGCCAAGGCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: PDGVAAGQRLQSRHFGRLGRPWS*LAKAAG
Trigger: CCCTGCTGCCTTGGCCAGCCAGGACCAGGGTCTGCC...TAGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACCCCGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR TCA 90 bp CCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: PFWGPQATSEPPESCTPRASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...CCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR TCA 90 bp CCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: PPESCTPRLHGGWTVLLLASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...GAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
3UTR-3UTR GCA 90 bp CTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCAACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: LGSPGDLRATRVLHATAATEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...TGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR GCA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR CAA 90 bp TCTGTGCCTCCAGGACCAGGGGCCCACCCTCTGCCCAGGGAGTCCTaGCGTCCCATGAGGTCTTCCCGCAAGGCCTCTCAGACCCAGATG +
Preference number: 2 (lower is better)
Translates to: SVPPGPGAHPLPRES*RPMRSSRKASQTQM
Trigger: CATCTGGGTCTGAGAGGCCTTGCGGGAAGACCTCATGGGACGCAAGGACTCCCTGGGCAGAGGGTGGGCCCCTGGTCCTGGAGGCACAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp GACCCTGGTCCTGGCTGGCCAAGGCAGCAGGGTATGTGTTTCGGGTCACTCACAACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: DPGPGWPRQQGMCFGSLTTAARS*PLPAGA
Trigger: AGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGT...TGTGAGTGACCCGAAACACATACCCTGCTGCCTTGGCCAGCCAGGACCAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp CCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACGACAAGAAACCCGGGTaGGAAGATGGGCTTTCTGCG +
Preference number: 2 (lower is better)
Translates to: PESCTPRLHGGWTVLLLHDKKPG*EDGLSA
Trigger: CGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC...GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
3UTR-3UTR CCA 90 bp GGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGACAAGAAACCCGGGTaGGAAGATGGGCTTTCTGCG +
Preference number: 2 (lower is better)
Translates to: GPQATSEPPESCTPRLHGDKKPG*EDGLSA
Trigger: CGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC...TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
3UTR-3UTR TCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTGACCCATCGTCAGGTTaGCCTGCTGGCCAACCTCAG +
Preference number: 2 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPDPSSG*PAGQPQ
Trigger: CTGAGGTTGGCCAGCAGGTCAACCTGACGATGGGTC...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp GCACTGAGTGAACCAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCCATCCCCCGCCGTTGTaGCCACTTTTGCCCACCTCT +
Preference number: 2 (lower is better)
Translates to: ALSEPDSVCNPGTSGGRGHPPPL*PLLPTS
Trigger: AGAGGTGGGCAAAAGTGGTCACAACGGCGGGGGATG...GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTGGTTCACTCAGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR GCA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 2 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGTGCACTCTGCAGCACTaGATATGCGGTGGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGCTLQH*ICGGAC
Trigger: GCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCA...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR GCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
3UTR-3UTR GCA 90 bp CTGCAATCTCGGCACTTTGGGAGGCTAAGGCAGGCAGCTGGGAGGTGGAGGTTGCAGCAGGGCTGGGCCTaGGAGACCCAAGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LQSRHFGRLRQAAGRWRLQQGWA*ETQGSL
Trigger: CAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTGCTG...CAACCTCCACCTCCCAGCTGCCTGCCTTAGCCTCCCAAAGTGCCGAGATTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR GCA 90 bp TCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SEPPESCTPRLHGGWTVLGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
3UTR-3UTR GCA 90 bp GACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: DLLGSPGDLRATRVLHATRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...CGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
3UTR-3UTR TCA 90 bp TCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: SVRASFSAFFQDQGLGCKTAARS*PLPAGA
Trigger: AGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGT...CTTGCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR GCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGCCAGTGTGGTGGTGTaGATCTGTGGTCCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: SALCVVQGQRRPTLADVGASVVV*ICGPSY
Trigger: GTAGCTGGGACCACAGATGCACACCACCACACTGGC...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp CTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LRATRVLHATAARRLDGAFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...AGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
3UTR-3UTR GCA 90 bp TCCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: SLLGSPGDLRATRVLHATCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...CGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGACAAGAAACCCGGGTaGGAAGATGGGCTTTCTGCG +
Preference number: 2 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLDKKPG*EDGLSA
Trigger: CGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp GGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCACGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GPERNCLSLTFWGPQATSRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp TGGGCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATGGGCGGCCAGGCAGCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 2 (lower is better)
Translates to: WAARQRGSSHSRRWAARQLRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...CTGCCTGGCCGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp TCCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SLLGSPGDLRATRVLHATTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...CGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR TCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGTTCAGGGCGGCCCGCTaGCGACTCCTGCCCGGACAA +
Preference number: 2 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSFRAAR*RLLPGQ
Trigger: TTGTCCGGGCAGGAGTCGTCAGCGGGCCGCCCTGAA...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp CCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: PESCTPRLHGGWTVLLLHLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR TCA 90 bp CTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: LGSPGDLRATRVLHATAALLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...TGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR TCA 90 bp CTGCAATCTCGGCACTTTGGGAGGCTAAGGCAGGCAGCTGGGAGGTGGAGGTTGAGGCACTCGGCAGGCTaGGGCAAGAGAATCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LQSRHFGRLRQAAGRWRLRHSAG*GKRIRQ
Trigger: CTGCCTGATTCTCTTGCCTCAGCCTGCCGAGTGCCT...CAACCTCCACCTCCCAGCTGCCTGCCTTAGCCTCCCAAAGTGCCGAGATTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR GCA 90 bp CGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: RLHGGWTVLLLHFLFLGRTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp CAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: QGWACETQGSLQRAPDPSSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GGAGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp CCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: PPESCTPRLHGGWTVLLLSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp GGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGTCCTTGCAGCAGGGCTaGGCCTGCGAGACCCAAGGC +
Preference number: 2 (lower is better)
Translates to: GLCTGQFLCLLPGSGVRVSLQQG*ACETQG
Trigger: GCCTTGGGTCTCGCAGGCCCAGCCCTGCTGCAAGGA...CACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR TCA 90 bp CGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: RRIAGLCTGQFLCLLPGSTAARS*PLPAGA
Trigger: AGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGT...TGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR GCA 90 bp GTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTATCGTCAGGTTGACCTaGTGGCCAACCTCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: VCGPRKLDSGSGPAEAFSIVRLT*WPTSVS
Trigger: AGAAACTGAGGTTGGCCAGCAGGTCAACCTGACGAT...AGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp ACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTGGACTGGAAGCTTGGACAAAGGTCCCCGTaGTCCACGCAGAATGAGACG +
Preference number: 2 (lower is better)
Translates to: TLHSAALDMRWGLLDWKLGQRSP*STQNET
Trigger: CGTCTCATTCTGCGTGGAGCACGGGGACCTTTGTCC...AAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 2 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp TCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SCTPRLHGGWTVLLLHFLTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...AAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
3UTR-3UTR TCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGAATGCTCTTTGGTCCTaGGTTACCCTCATGGGAGAC +
Preference number: 2 (lower is better)
Translates to: SALCVVQGQRRPTLADVGNALWS*VTLMGD
Trigger: GTCTCCCATGAGGGTAACTCAGGACCAAAGAGCATT...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp CTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: LPAGATLAAQHIACLMAFASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...GAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR TCA 90 bp ACTGGGCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATGGGCGGCCAGGCTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 2 (lower is better)
Translates to: TGQPGRGAPHIPDDGRPGFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...GCCTGGCCGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR TCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000640942.1
3UTR-3UTR TCA 90 bp ACTCGGCAGGCTGAGGCAAGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: TRQAEARESGREVAVSRDQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...ATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCTTGCCTCAGCCTGCCGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR TCA 90 bp GAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: EKLFVTDLLGSPGDLRATQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...GGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
3UTR-3UTR GCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGCAGCACTTTGGGAAGTaGGAAGATTGCTTGAGCTCA +
Preference number: 2 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGQHFGK*EDCLSS
Trigger: TGAGCTCAAGCAATCTTCCCACTTCCCAAAGTGCTG...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp ACTGGGCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATGGGCGGCCAGGCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: TGQPGRGAPHIPDDGRPGSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GCCTGGCCGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp TCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGGTTTCCTGGGTGCCCTaGCTCCTTGCAGCAGGGCTG +
Preference number: 2 (lower is better)
Translates to: SVRASFSAFFQDQGLGCKVSWVP*LLAAGL
Trigger: CAGCCCTGCTGCAAGGAGCCAGGGCACCCAGGAAAC...CTTGCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR CAA 90 bp TATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTaGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCC +
Preference number: 2 (lower is better)
Translates to: YHTHAQWSLGPERNC*SLTFWGPQATSEPP
Trigger: GGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR TCA 90 bp TCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGACACTTCGTCAACTGTaGCAAAAGACAGAATTATCA +
Preference number: 2 (lower is better)
Translates to: SPGDLRATRVLHATAARRTLRQL*QKTELS
Trigger: TGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGT...CCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
3UTR-3UTR TCA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTGTGCTCCACGCAGAATaGGACGATGGCCCTGACCCA +
Preference number: 2 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLVLHAE*DDGPDP
Trigger: TGGGTCAGGGCCATCGTCTCATTCTGCGTGGAGCAC...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTAGACAACACCCTAAGTaGAGAGTGCCTCACATACAA +
Preference number: 2 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALRQHPK*RVPHIQ
Trigger: TTGTATGTGAGGCACTCTTCACTTAGGGTGTTGTCT...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGTGGGGGTGGGGGCAGTaGCTGACGCCCAGTGGACTC +
Preference number: 2 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSWGWGQ*LTPSGL
Trigger: GAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCA...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp GTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTACCCTAAGTGAAGAGTaGCTCACATACAAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: VCGPRKLDSGSGPAEAFSTLSEE*LTYKSP
Trigger: TGGACTCTTGTATGTGAGGCACTCTTCACTTAGGGT...AGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGAGCGGAGACCGACCTTaGCTGATGTGGGGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQSGDRP*LMWGWG
Trigger: CCCCCACCCCCACATCAGCCAAGGTCGGTCTCCGCT...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCCCAGGGACTGGCCCGTaGCAGACTCTCTGGTCATTC +
Preference number: 2 (lower is better)
Translates to: REKQCESSDRVGPCSTATPGTGP*QTLWSF
Trigger: GAATGACCAGAGAGTCTGCCACGGGCCAGTCCCTGG...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp CGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCACCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 2 (lower is better)
Translates to: RRIAGLCTGQFLCLLPGSPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...TGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp TACAGGGAAAGCAGGTCCACTGTGGCCTGTGAGGACGAGAGCTCTGGGCAGGCTCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 2 (lower is better)
Translates to: YRESRSTVACEDESSGQALRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...AGCCTGCCCAGAGCTCTCGTCCTCACAGGCCACAGTGGACCTGCTTTCCCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp CGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCATCCTTGCAGCAGGGCTaGGCCTGCGAGACCCAAGGC +
Preference number: 2 (lower is better)
Translates to: RRIAGLCTGQFLCLLPGSSLQQG*ACETQG
Trigger: GCCTTGGGTCTCGCAGGCCCAGCCCTGCTGCAAGGA...TGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR CAA 90 bp GCCTGGTGTCGCAGTGGCAGAGTTGAGCAGTGTGAAAAAGACTGCTaGGCCCTTTACAGGGAAAGCAGGTCCACTGTGGCCTGTGAGGAC +
Preference number: 2 (lower is better)
Translates to: AWCRSGRVEQCEKDC*ALYRESRSTVACED
Trigger: GTCCTCACAGGCCACAGTGGACCTGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTGCTCAACTCTGCCACTGCGACACCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR TCA 90 bp GCTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACCCAGCCCCTCTCTTCTaGGACCCAATCCCAGTTGAC +
Preference number: 2 (lower is better)
Translates to: AASHSQPAGVPRFLLHWHPAPLF*DPIPVD
Trigger: GTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGG...GTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
3UTR-3UTR TCA 90 bp GCTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: AASHSQPAGVPRFLLHWHQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...GTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000524068.5
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR TCA 90 bp ACTGGGCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATGGGCGGCCAGGCAAAAGATGTGACAGGTaGAATGCCTATTTCAGTGTC +
Preference number: 2 (lower is better)
Translates to: TGQPGRGAPHIPDDGRPGKRCDR*NAYFSV
Trigger: GACACTGAAATAGGCATTTCACCTGTCACATCTTTT...GCCTGGCCGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR GCA 90 bp CAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: QWSLGPERNCLSLTFWGPTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...GGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR GCA 90 bp CGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAAGACCCAAGGCTCACTaGAGCGCGCTCCTGACCCCT +
Preference number: 2 (lower is better)
Translates to: RRIAGLCTGQFLCLLPGSRPKAH*SALLTP
Trigger: AGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCT...TGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR GCA 90 bp GCACTGAGTGAACCAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCCAGCTCCGTCCAAGTTaGTGCAAAAGGTATTATTTC +
Preference number: 2 (lower is better)
Translates to: ALSEPDSVCNPGTSGGRGQLRPS*CKRYYF
Trigger: GAAATAATACCTTTTGCAGCAACTTGGACGGAGCTG...GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTGGTTCACTCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp CTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 2 (lower is better)
Translates to: LFLGGRTNCAHLEDVAVTRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...GGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
3UTR-3UTR CCA 90 bp GTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCCCTCTCGCATCCGAGTCAGCCTaGGCCAACCAGGTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: VYNQHQSLHHKPGKPAPLASESA*ANQVAS
Trigger: AGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGC...GAGAGGGGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
3UTR-3UTR CCA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp CAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGTGCTGATGTTTCCTaGGTGCCCTGGCTCCTTGCA +
Preference number: 2 (lower is better)
Translates to: QVSVRASFSAFFQDQGLGCADVS*VPWLLA
Trigger: TGCAAGGAGCCAGGGCACCCAGGAAACATCAGCACA...CCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR TCA 90 bp GCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTATGAGACGATGGCCCTaGCCCATCGTCAGGTTGACC +
Preference number: 2 (lower is better)
Translates to: ASDRKDKKPGWEDGLSAGMRRWP*PIVRLT
Trigger: GGTCAACCTGACGATGGGTCAGGGCCATCGTCTCAT...ACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGGTGCCCTGGCTCCTCTaGCAGGCAGAGCAAACCCTG +
Preference number: 2 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSVPWLL*QAEQTL
Trigger: CAGGGTTTGCTCTGCCTGTCAGAGGAGCCAGGGCAC...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp CGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: RLHGGWTVLLLHFLFLGRLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...CCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR TCA 90 bp CTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: LILDKVSLGVVSRQAGEAASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...GGCCTCCCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR TCA 90 bp GGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGGCAAAACAAGTGACATaGAGGGAGGGTCCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: GLCTGQFLCLLPGSGVRVAKQVT*REGPCV
Trigger: CACACAGGGACCCTCCCTTCATGTCACTTGTTTTGC...CACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR GCA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCATATGCGGTGGGGCCTaGTGGACTGGAAGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: REKQCESSDRVGPCSTATICGGA*WTGSFK
Trigger: CTTGAAGCTTCCAGTCCAGCAGGCCCCACCGCATAT...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCGATACCATTACAACATaGAGCCCAGGGACTGGCCCG +
Preference number: 2 (lower is better)
Translates to: REKQCESSDRVGPCSTATDTITT*SPGTGP
Trigger: CGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATC...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp GCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: ACVELQVSVRASFSAFFQTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR GCA 90 bp TACAGGGAAAGCAGGTCCACTGTGGCCTGTGAGGACGAGAGCTCTGGGCAGGCTGCCCAGCACATAGCTTaGCTAATGGCTTTCACTTTC +
Preference number: 2 (lower is better)
Translates to: YRESRSTVACEDESSGQAAQHIA*LMAFTF
Trigger: GAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGC...AGCCTGCCCAGAGCTCTCGTCCTCACAGGCCACAGTGGACCTGCTTTCCCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR GCA 90 bp GTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTCCTGACCCCTCCCTaGAGGGGCTACGTTAGCAGC +
Preference number: 2 (lower is better)
Translates to: VLSLRRIAGLCTGQFLCLLLTPP*RGYVSS
Trigger: GCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG...AAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGCTTAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR GCA 90 bp CTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: LHGGWTVLLLHFLFLGRSCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...AGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
3UTR-3UTR GCA 90 bp GTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: VSVRASFSAFFQDQGLGCRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...GCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR GCA 90 bp GACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: DGAPAPLPFSRQVLTEAGRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...CCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAAAGCGGAGACCGACCTTaGCTGATGTGGGGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: EAVRLGQALILRVSKTKQSGDRP*LMWGWG
Trigger: CCCCCACCCCCACATCAGCCAAGGTCGGTCTCCGCT...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp GTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 2 (lower is better)
Translates to: VVGFLLGLRRLTKGIRNVLRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...AACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGCCCACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR CCA 90 bp CCCCTCTCTTCTGAGACCCAATCCCAGTTGACTGGACCAGAGGTGGGCATCCGAACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: PLSSETQSQLTGPEVGIRTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...TCGGATGCCCACCTCTGGTCCAGTCAACTGGGATTGGGTCTCAGAAGAGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
3UTR-3UTR TCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGGTGCTCCACGCAGAATaGGACGATGGCCCTGACCCA +
Preference number: 2 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSVLHAE*DDGPDP
Trigger: TGGGTCAGGGCCATCGTCTCATTCTGCGTGGAGCAC...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp CTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: LLRPSLEACALGVPCLACLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...ACAGGCTAAGCAAGGGACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
3UTR-3UTR TCA 90 bp GTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: VLSLRRIAGLCTGQFLCLASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...AAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGCTTAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR GCA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAAGCAGTGCCCTTGCTGTaGCCTGGCTCCTCTGACAGG +
Preference number: 2 (lower is better)
Translates to: EAVRLGQALILRVSKTKQAVPLL*PGSSDR
Trigger: CCTGTCAGAGGAGCCAGGGCACAGCAAGGGCACTGC...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp GGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCATTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 2 (lower is better)
Translates to: GPERNCLSLTFWGPQATSFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
3UTR-3UTR GCA 90 bp GCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCCCTCTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: ASTISTRAFTISLVSQPLCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...GAGGGGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
3UTR-3UTR GCA 90 bp CATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: HGVYNQHQSLHHKPGKPAGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
3UTR-3UTR GCA 90 bp GCTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: AASHSQPAGVPRFLLHWHGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR GCA 90 bp GCTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: AASHSQPAGVPRFLLHWHRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...GTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000524068.5
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR CCA 90 bp AAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACGTCAGGTTGACCTGCTaGCCAACCTCAGTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: KTRNPGGKMGFLRVGIAHVRLTC*PTSVSP
Trigger: TGGAGAAACTGAGGTTGGCCAGCAGGTCAACCTGAC...GTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp GCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: AARRLDGAPAPLPFSRQVSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp ATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCGCATCCGAGTCAGCCTaGGCCAACCAGGTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: IPSLLVSHVFFFTGTDSFASESA*ANQVAS
Trigger: AGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGC...GAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
3UTR-3UTR CCA 90 bp TCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SLGPERNCLSLTFWGPQATFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...CGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
3UTR-3UTR CCA 90 bp GCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGTGTGCTGATGTTTCCTaGGTGCCCTGGCTCCTTGCA +
Preference number: 2 (lower is better)
Translates to: ACVELQVSVRASFSAFFQCADVS*VPWLLA
Trigger: TGCAAGGAGCCAGGGCACCCAGGAAACATCAGCACA...CTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR CAA 90 bp TTCTGCTTACACACCACCTGGCTGCCTGGTGTCGCAGTGGCAGAGTaGAGCAGTGTGAAAAAGACTGCTTGGCCCTTTACAGGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: FCLHTTWLPGVAVAE*SSVKKTAWPFTGKA
Trigger: TGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTGCTCAACTCTGCCACTGCGACACCAGGCAGCCAGGTGGTGTGTAAGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR TCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTTGGGGGTGGGGGCAGTaGCTGACGCCCAGTGGACTC +
Preference number: 2 (lower is better)
Translates to: CISINNLPVPDHTSSSKSWGWGQ*LTPSGL
Trigger: GAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCA...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp GGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: GTREKLFVTDLLGSPGDLLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...GAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR GCA 90 bp GGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGATCGTCAGGTTGACCTaGTGGCCAACCTCAGTTTCT +
Preference number: 2 (lower is better)
Translates to: GFRQKRQETRVGRWAFCGIVRLT*WPTSVS
Trigger: AGAAACTGAGGTTGGCCAGCAGGTCAACCTGACGAT...CCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp AGATTCAAAGCCACTTACTTACCCAGGATCACAAAACTAGTTGGCGGCAACATCCCCGCTGACGACTCCTaGCCGGACAAAGGTCCCCGT +
Preference number: 2 (lower is better)
Translates to: RFKATYLPRITKLVGGNIPADDS*PDKGPR
Trigger: ACGGGGACCTTTGTCCGGGCAGGAGTCGTCAGCGGG...GATGTTGCCGCCAACTAGTTTTGTGATCCTGGGTAAGTAAGTGGCTTTGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAACTGCAGCACTGGATATaGGGTGGGGCCTGCTGGACT +
Preference number: 2 (lower is better)
Translates to: EAVRLGQALILRVSKTKQLQHWI*GGACWT
Trigger: AGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAG...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp GGGTTGTGCTGCTTACAAAGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCAACTGCAGTGCCCTTaGTGTGCCCTGGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: GLCCLQREKQCESSDRVGQLQCP*CALAPL
Trigger: CAGAGGAGCCAGGGCACAGCAAGGGCACTGCAGTTG...ACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCTTTGTAAGCAGCACAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 2 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
3UTR-3UTR GCA 90 bp TTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: FLLGLRRLTKGIRNVGFTGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...AGTGAAACCAACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGTGCGGTGGGGCCTGCTaGACTGGAAGCTTCAAGAAC +
Preference number: 2 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSCGGAC*TGSFKN
Trigger: GTTCTTGAAGCTTCCAGTCCAGCAGGCCCCACCGCA...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp CCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCGCATCCGAGTCAGCCTaGGCCAACCAGGTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: PTFSSSLALTVSSRDLSGASESA*ANQVAS
Trigger: AGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGC...GCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
3UTR-3UTR TCA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAAGAGGCTCTGCGGCCCTaGAACTTGACGTTGGCTTTG +
Preference number: 2 (lower is better)
Translates to: EAVRLGQALILRVSKTKQEALRP*NLTLAL
Trigger: CAAAGCCAACGTCAAGTTTCAGGGCCGCAGAGCCTC...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGAGGCAGAGGTTGCAGTaGGCCGAAATCACGCCATTC +
Preference number: 2 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSRQRLQ*AEITPF
Trigger: GAATGGCGTGATTTCGGCTCACTGCAACCTCTGCCT...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp GACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: DGAPAPLPFSRQVLTEAGLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...CCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR TCA 90 bp CTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 2 (lower is better)
Translates to: LPAGATLAAQHIACLMAFFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...GAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR TCA 90 bp ATTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: IITHTLSGHWDQRETVCHQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...GTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
3UTR-3UTR GCA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTAGGCAGAGCAAACCCTaGACTCTGCAGCACTGGATA +
Preference number: 2 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTRQSKP*TLQHWI
Trigger: TATCCAGTGCTGCAGAGTGCAGGGTTTGCTCTGCCT...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp CTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LHIPSLLVSHVFFFTGTDFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...GTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR GCA 90 bp GCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 2 (lower is better)
Translates to: ACVELQVSVRASFSAFFQFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...CTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR GCA 90 bp CACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 2 (lower is better)
Translates to: HIPSLLVSHVFFFTGTDSFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...ACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR GCA 90 bp TCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SHTRSVVTGTREKLFVTDGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
3UTR-3UTR GCA 90 bp ATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: IPSLLVSHVFFFTGTDSFGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR CCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGCCTGAGTTACCCTCATaGGAGACGAGAGGCATGGGA +
Preference number: 2 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSPELPS*ETRGMG
Trigger: TCCCATGCCTCTCGTCTCCCATGAGGGTAACTCAGG...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp GGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCATCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: GPERNCLSLTFWGPQATSSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp CTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 2 (lower is better)
Translates to: LILDKVSLGVVSRQAGEALRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...GGCCTCCCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR CCA 90 bp CTCCTGACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTTTTCTGCTACAGACCTaGTACACTCTGATTTTAGAT +
Preference number: 2 (lower is better)
Translates to: LLTPPCRGYVSSPAHSLPFLLQT*YTLILD
Trigger: ATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAA...AGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR CCA 90 bp CTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: LLHIPSLLVSHVFFFTGTTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...AGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR CCA 90 bp CTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: LHIPSLLVSHVFFFTGTDTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...GTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR TCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGAGACAACACCCTAAGTaGAGAGTGCCTCACATACAA +
Preference number: 2 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSRQHPK*RVPHIQ
Trigger: TTGTATGTGAGGCACTCTTCACTTAGGGTGTTGTCT...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp CTGGTCATTCTTCTAGGATTTGGAGATTCAAAGCCACTTACTTACCCAGGATCAGTGCCCTGGCTCCTCTaGCAGGCAGAGCAAACCCTG +
Preference number: 2 (lower is better)
Translates to: LVILLGFGDSKPLTYPGSVPWLL*QAEQTL
Trigger: CAGGGTTTGCTCTGCCTGTCAGAGGAGCCAGGGCAC...TGATCCTGGGTAAGTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAAGAACCAAAGATGCTCTaGAAGTTGGGTGTCGGCCGG +
Preference number: 2 (lower is better)
Translates to: EAVRLGQALILRVSKTKQEPKML*KLGVGR
Trigger: CCGGCCGACACCCAACTTTCAGAGCATCTTTGGTTC...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp ACTCGGCAGGCTGAGGCAAGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATAAAAGATGTGACAGGTaGAATGCCTATTTCAGTGTC +
Preference number: 2 (lower is better)
Translates to: TRQAEARESGREVAVSRDKRCDR*NAYFSV
Trigger: GACACTGAAATAGGCATTTCACCTGTCACATCTTTT...ATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCTTGCCTCAGCCTGCCGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR GCA 90 bp GCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTCTCCAAGGGTCACAATaGTCTTTGGTCCTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: ASDRKDKKPGWEDGLSAGLQGSQ*SLVLSY
Trigger: GTAACTCAGGACCAAAGAGCATTGTGACCCTTGGAG...ACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTGACTCCCAACTGCAGTaGCCTTGCTGTGCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: LRVSKTKQINAFHLTANLDSQLQ*PCCALA
Trigger: AGCCAGGGCACAGCAAGGGCACTGCAGTTGGGAGTC...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp TCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 2 (lower is better)
Translates to: SSSWESFSRYFSQRLSEGFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...GCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
ENST00000640942.1
3UTR-3UTR GCA 90 bp CCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 2 (lower is better)
Translates to: PACWCPTFSSSLALTVSSFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...AGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR GCA 90 bp GGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 2 (lower is better)
Translates to: GPGSSILDEGCLLKHTPVFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
ENST00000640942.1
3UTR-3UTR GCA 90 bp TTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: FPACWCPTFSSSLALTVSCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...AGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR GCA 90 bp TTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACATGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: FTFPACWCPTFSSSLALTCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...TGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR GCA 90 bp CCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: PTFSSSLALTVSSRDLSGGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR CCA 90 bp CTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCCCTGAGTTACCCTCATaGGAGACGAGAGGCATGGGA +
Preference number: 2 (lower is better)
Translates to: LFLGGRTNCAHLEDVAVTPELPS*ETRGMG
Trigger: TCCCATGCCTCTCGTCTCCCATGAGGGTAACTCAGG...GGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp GAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCACACTTCGTCAACTGTaGCAAAAGACAGAATTATCA +
Preference number: 2 (lower is better)
Translates to: EKLFVTDLLGSPGDLRATTLRQL*QKTELS
Trigger: TGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGT...GGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
3UTR-3UTR TCA 90 bp AGATTCAAAGCCACTTACTTACCCAGGATCACAAAACTAGTTGGCGGCAACATCATGAGACGATGGCCCTaGCCCATCGTCAGGTTGACC +
Preference number: 2 (lower is better)
Translates to: RFKATYLPRITKLVGGNIMRRWP*PIVRLT
Trigger: GGTCAACCTGACGATGGGTCAGGGCCATCGTCTCAT...GATGTTGCCGCCAACTAGTTTTGTGATCCTGGGTAAGTAAGTGGCTTTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp AGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCACCAGCCCCTCTCTTCTaGGACCCAATCCCAGTTGAC +
Preference number: 2 (lower is better)
Translates to: SRFNFWTWRLQSAPEPSPPAPLF*DPIPVD
Trigger: GTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGG...TGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
3UTR-3UTR TCA 90 bp GTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: VSSRDLSGSSETCPCSRFQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...AAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
3UTR-3UTR GCA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAAAGGCAGAGCAAACCCTaGACTCTGCAGCACTGGATA +
Preference number: 2 (lower is better)
Translates to: EAVRLGQALILRVSKTKQRQSKP*TLQHWI
Trigger: TATCCAGTGCTGCAGAGTGCAGGGTTTGCTCTGCCT...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTCTGGGAGGCAGAGGTTaGAGTGAGCCGAAATCACGC +
Preference number: 2 (lower is better)
Translates to: LRVSKTKQINAFHLTANLLGGRG*SEPKSR
Trigger: GCGTGATTTCGGCTCACTGCAACCTCTGCCTCCCAG...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp TGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: CWCPTFSSSLALTVSSRDGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR GCA 90 bp TCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SSLALTVSSRDLSGSSETGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...AGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR CCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTGTGACTGACGCCCAGTaGACTCCCAACTGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: CISINNLPVPDHTSSSKSVTDAQ*TPNCSA
Trigger: GGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCAC...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTACTGGTGCTGGGGTCTaGCTTCTCTCACCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: LRVSKTKQINAFHLTANLTGAGV*LLSPQE
Trigger: TTCCTGGGGTGAGAGAAGCCAGACCCCAGCACCAGT...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp CTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCTCCTCCATTTTTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: LPFSRQVLTEAGAWLLHFSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...AAAATGGAGGAGCCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp GTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATGCATCCGAGTCAGCCTaGGCCAACCAGGTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: VDLTFGHGVYNQHQSLHHASESA*ANQVAS
Trigger: AGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGC...ATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
3UTR-3UTR TCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTGCACTCCAGCCTAGGTaGCAGAGTGACACCCCATCT +
Preference number: 2 (lower is better)
Translates to: CISINNLPVPDHTSSSKSALQPR*QSDTPS
Trigger: AGATGGGGTGTCACTCTGTCACCTAGGCTGGAGTGC...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp TCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTCCAGCCCCTCTCTTCTaGGACCCAATCCCAGTTGAC +
Preference number: 2 (lower is better)
Translates to: SRDLSGSSETCPCSRFNFPAPLF*DPIPVD
Trigger: GTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGG...AAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
3UTR-3UTR TCA 90 bp ACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 2 (lower is better)
Translates to: TFPACWCPTFSSSLALTVFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...AACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR TCA 90 bp TCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 2 (lower is better)
Translates to: SRDLSGSSETCPCSRFNFQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...AAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
3UTR-3UTR GCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTGATACCATTACAACATaGAGCCCAGGGACTGGCCCG +
Preference number: 2 (lower is better)
Translates to: LRVSKTKQINAFHLTANLDTITT*SPGTGP
Trigger: CGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATC...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp GTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTGCCCAGCACATAGCTTaGCTAATGGCTTTCACTTTC +
Preference number: 2 (lower is better)
Translates to: VLSLRRIAGLCTGQFLCLAQHIA*LMAFTF
Trigger: GAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGC...AAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGCTTAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR CCA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTCAGGTTGACCTGCTaGCCAACCTCAGTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: CELFLGGRTNCAHLEDVAVRLTC*PTSVSP
Trigger: TGGAGAAACTGAGGTTGGCCAGCAGGTCAACCTGAC...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTGGGCAAATGCGAGTGTaGAGGGAAGCATCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: CISINNLPVPDHTSSSKSGQMRV*REASPR
Trigger: CCTGGGAGATGCTTCCCTCCACACTCGCATTTGCCC...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTACTGGTGCTGGGGTCTaGCTTCTCTCACCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: CISINNLPVPDHTSSSKSTGAGV*LLSPQE
Trigger: TTCCTGGGGTGAGAGAAGCCAGACCCCAGCACCAGT...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp TCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: SSSWESFSRYFSQRLSEGSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000640706.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp TACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 2 (lower is better)
Translates to: YTLILDKVSLGVVSRQAGLRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...CCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR CCA 90 bp CAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTTTCTGCTACAGACCTaGTACACTCTGATTTTAGAT +
Preference number: 2 (lower is better)
Translates to: QVSVRASFSAFFQDQGLGFLLQT*YTLILD
Trigger: ATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAA...CCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR CCA 90 bp CTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCTTTCTGCTACAGACCTaGTACACTCTGATTTTAGAT +
Preference number: 2 (lower is better)
Translates to: LPAGATLAAQHIACLMAFFLLQT*YTLILD
Trigger: ATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAA...GAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR CCA 90 bp TCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SSLALTVSSRDLSGSSETTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...AGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR TCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGACAAAGCAACAGGCTTaGGGGAGCATGAAACACAAT +
Preference number: 2 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSTKQQA*GSMKHN
Trigger: ATTGTGTTTCATGCTCCCTCAAGCCTGTTGCTTTGT...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR GCA 90 bp GTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: VAALKLVPVVDLTFGHGVCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...GACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
3UTR-3UTR GCA 90 bp AGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCAGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SRFNFWTWRLQSAPEPSPGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...TGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
3UTR-3UTR CCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGATAGTCCCAGCACTTTaGGAAGTGGGAAGATTGCTT +
Preference number: 2 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSIVPAL*EVGRLL
Trigger: AAGCAATCTTCCCACTTCCCAAAGTGCTGGGACTAT...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR TCA 90 bp ATTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: IITHTLSGHWDQRETVCHLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...GTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR TCA 90 bp TCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAACTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: SSSLALTVSSRDLSGSSELLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...TTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR GCA 90 bp CTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 2 (lower is better)
Translates to: LSGSSETCPCSRFNFWTWFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...CCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
3UTR-3UTR CCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTGGTCACATAGTCGTGTaGGTCGAGGATTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: CISINNLPVPDHTSSSKSGHIVV*VEDSVP
Trigger: AGGCACAGAATCCTCGACCCACACGACTATGTGACC...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp ATTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: IITHTLSGHWDQRETVCHSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR CCA 90 bp ACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTTTAACTTTTGGACATaGCGTCTACAATCAGCACCA +
Preference number: 2 (lower is better)
Translates to: TFPACWCPTFSSSLALTVFNFWT*RLQSAP
Trigger: TGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAA...AACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
3UTR-3UTR CCA 90 bp GGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTAACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: GSSETCPCSRFNFWTWRLTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...TAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
3UTR-3UTR TCA 90 bp CTGGTCATTCTTCTAGGATTTGGAGATTCAAAGCCACTTACTTACCCAGGATCATTGAGCTCAGGAGTTTaGGACAAGCCTGGGCAACAT +
Preference number: 2 (lower is better)
Translates to: LVILLGFGDSKPLTYPGSLSSGV*DKPGQH
Trigger: ATGTTGCCCAGGCTTGTCTCAAACTCCTGAGCTCAA...TGATCCTGGGTAAGTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR TCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTCCTACAAAAGAATTTTaGGCAGAAGGGCCTCGAGAC +
Preference number: 2 (lower is better)
Translates to: LRVSKTKQINAFHLTANLPTKEF*AEGPRD
Trigger: GTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGG...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR GCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACACTCCAAGGGTCACAATaGTCTTTGGTCCTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTLQGSQ*SLVLSY
Trigger: GTAACTCAGGACCAAAGAGCATTGTGACCCTTGGAG...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp GAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACACACGCTCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 2 (lower is better)
Translates to: ESHTSSTVTKDRIITHTLSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
3UTR-3UTR TCA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTACACTTCGTCAACTGTaGCAAAAGACAGAATTATCA +
Preference number: 2 (lower is better)
Translates to: CELFLGGRTNCAHLEDVATLRQL*QKTELS
Trigger: TGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGT...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CCA 90 bp GTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 2 (lower is better)
Translates to: VDYFLLQTWYTLILDKVSLRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...GCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAAATAATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR GCA 90 bp GTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: VDYFLLQTWYTLILDKVSCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...GCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAAATAATCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR GCA 72 bp TGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGAGGCTGGACGGTGCTC +
Preference number: 3 (lower is better)
Translates to: WGPQATSEPPES*TPRLHGGWTVL
Trigger: GAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp CAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCCTGGGGAGGCCAGTGTaGTGGGCTTCCTGCTGGGAC +
Preference number: 3 (lower is better)
Translates to: QGWACETQGSLQRAPDPSLGRPV*WASCWD
Trigger: GTCCCAGCAGGAAGCCCACAACACTGGCCTCCCCAG...GGAGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR TCA 72 bp GGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: GLRDPRLTAARS*PLPAGATLAAQ
Trigger: CTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCTCGCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR TCA 72 bp TGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTaGGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCC +
Preference number: 3 (lower is better)
Translates to: WPEEAGQRQWAC*GLLLRPVLWGS
Trigger: GGACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
3UTR CCA 72 bp GGTGGCGGCCGGGCAGAGGCTGCAATCTCGGCACTTTaGGAGGCTAAGGCAGGCAGCTGGGAGGTGGAGGTT +
Preference number: 3 (lower is better)
Translates to: GGGRAEAAISAL*EAKAGSWEVEV
Trigger: AACCTCCACCTCCCAGCTGCCTGCCTTAGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGCCCGGCCGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CCA 72 bp CGGGGCAGAGGCGCTCCCCACATCTCAGACGATGGGTaGCCGGGCAGAGACGCTCCTCACTTTCCAGACTGG +
Preference number: 3 (lower is better)
Translates to: RGRGAPHISDDG*PGRDAPHFPDW
Trigger: CCAGTCTGGAAAGTGAGGAGCGTCTCTGCCCGGCCACCCATCGTCTGAGATGTGGGGAGCGCCTCTGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CAA 90 bp ACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCATTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: TRVLHATAARRLDGAPAPFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...TGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp TCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: SEPPESCTPRLHGGWTVLFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...GAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR TCA 72 bp GCGGCGCGCACCTGCAATCGCAGGCACTCGGCAGGCTaGGGCAAGAGAATCAGGCAGGGAGGTTGCAGTGAG +
Preference number: 3 (lower is better)
Translates to: AARTCNRRHSAG*GKRIRQGGCSE
Trigger: CTCACTGCAACCTCCCTGCCTGATTCTCTTGCCTCAGCCTGCCGAGTGCCTGCGATTGCAGGTGCGCGCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR GCA 72 bp ATCTCCCAGGATTCAGGGCGGCCCGCTGACGACTCCTaGCCGGACAAAGGTCCCCGTGCTCCACGCAGAATG +
Preference number: 3 (lower is better)
Translates to: ISQDSGRPADDS*PDKGPRAPRRM
Trigger: CATTCTGCGTGGAGCACGGGGACCTTTGTCCGGGCAGGAGTCGTCAGCGGGCCGCCCTGAATCCTGGGAGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 72 bp CTCTCCAGAGCCTGCCGGGTTCTGCAGCTGCAGAGGTaGCAGCACCGAGCTCCCTGTGGGATAGGACTGGTG +
Preference number: 3 (lower is better)
Translates to: LSRACRVLQLQR*QHRAPCGIGLV
Trigger: CACCAGTCCTATCCCACAGGGAGCTCGGTGCTGCCACCTCTGCAGCTGCAGAACCCGGCAGGCTCTGGAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 72 bp CCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGC +
Preference number: 3 (lower is better)
Translates to: PPESCTPRLHGG*TVLLLHFLFLG
Trigger: GCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR CCA 72 bp GGGCAGGCTCGGACACTGGCAGACCCTGGTCCTGGCTaGCCAAGGCAGCAGGGTATGTGTTTCGGGTCACTC +
Preference number: 3 (lower is better)
Translates to: GQARTLADPGPG*PRQQGMCFGSL
Trigger: GAGTGACCCGAAACACATACCCTGCTGCCTTGGCCAGCCAGGACCAGGGTCTGCCAGTGTCCGAGCCTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CCA 72 bp CTCTGGGCAGGCTCGGACACTGGCAGACCCTGGTCCTaGCTGGCCAAGGCAGCAGGGTATGTGTTTCGGGTC +
Preference number: 3 (lower is better)
Translates to: LWAGSDTGRPWS*LAKAAGYVFRV
Trigger: GACCCGAAACACATACCCTGCTGCCTTGGCCAGCCAGGACCAGGGTCTGCCAGTGTCCGAGCCTGCCCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CCA 72 bp GCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATaGGCGGCCAGGCAGAGACGCTCCTCACTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: AARQRGSSHSRR*AARQRRSSLPR
Trigger: TCTGGGAAGTGAGGAGCGTCTCTGCCTGGCCGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CAA 90 bp TCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: SPGDLRATRVLHATAARRPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...CCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR TCA 72 bp ATGAGGTCTTCCCGCAAGGCCTCTCAGACCCAGATGTaGCGGGGTGTGTGGCCCGAGGAAGCTGGACAGCGG +
Preference number: 3 (lower is better)
Translates to: MRSSRKASQTQM*RGVWPEEAGQR
Trigger: CCGCTGTCCAGCTTCCTCGGGCCACACACCCCGTCACATCTGGGTCTGAGAGGCCTTGCGGGAAGACCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR GCA 72 bp CTGTGCCCTGGCTCCTCTGACAGGCAGAGCAAACCCTaGACTCTGCAGCACTGGATATGCGGTGGGGCCTGC +
Preference number: 3 (lower is better)
Translates to: LCPGSSDRQSKP*TLQHWICGGAC
Trigger: GCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGTTTGCTCTGCCTGTCAGAGGAGCCAGGGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp CGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: RVLHATAARRLDGAPAPLPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...AAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR TCA 72 bp GGTCCCCGTGCTCCACGCAGAATGAGACGATGGCCCTaGCCCATCGTCAGGTTGACCTGCTGGCCAACCTCA +
Preference number: 3 (lower is better)
Translates to: GPRAPRRMRRWP*PIVRLTCWPTS
Trigger: TGAGGTTGGCCAGCAGGTCAACCTGACGATGGGTCAGGGCCATCGTCTCATTCTGCGTGGAGCACGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR TCA 72 bp CACTGCACTCCAGCCTGGGCACCATTGAGCACTGAGTaGACCAGACTCCGTCTGCAATCCCGGCACCTCGGG +
Preference number: 3 (lower is better)
Translates to: HCTPAWAPLSTE*TRLRLQSRHLG
Trigger: CCCGAGGTGCCGGGATTGCAGACGGAGTCTGGTTCACTCAGTGCTCAATGGTGCCCAGGCTGGAGTGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR GCA 72 bp CTGGCTCCTCTGACAGGCAGAGCAAACCCTGCACTCTaGAGCACTGGATATGCGGTGGGGCCTGCTGGACTG +
Preference number: 3 (lower is better)
Translates to: LAPLTGRANPAL*STGYAVGPAGL
Trigger: CAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGTTTGCTCTGCCTGTCAGAGGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp GGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGATTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: GPQATSEPPESCTPRLHGLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR CCA 72 bp CTCAGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTaGAGGCAGGGGCTGCTGCCTTGTTTCACCTTCCAT +
Preference number: 3 (lower is better)
Translates to: LSSPALQSAEFS*RQGLLPCFTFH
Trigger: ATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
ENST00000640320.1
3UTR CCA 72 bp CTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTaGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCC +
Preference number: 3 (lower is better)
Translates to: LGPERNCLSLTF*GPQATSEPPES
Trigger: GGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp CGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTCTGGGGAGGCCAGTGTaGTGGGCTTCCTGCTGGGAC +
Preference number: 3 (lower is better)
Translates to: RGPGSSILDEGCLLKHTPLGRPV*WASCWD
Trigger: GTCCCAGCAGGAAGCCCACAACACTGGCCTCCCCAG...AGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CCA 72 bp GCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTTaGCTCGGCATCAGAGGGAGACCGTGGAGAAAGAGG +
Preference number: 3 (lower is better)
Translates to: AVSRDGSSTVQL*LGIRGRPWRKR
Trigger: CCTCTTTCTCCACGGTCTCCCTCTGATGCCGAGCCAAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CAA 90 bp TCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTGGGTCACAATGCTCTTaGGTCCTGAGTTACCCTCAT +
Preference number: 3 (lower is better)
Translates to: SPALQSAEFSWRQGLLPCGSQCS*VLSYPH
Trigger: ATGAGGGTAACTCAGGACCAAAGAGCATTGTGACCC...ACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR TCA 72 bp AGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTaGCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCAC +
Preference number: 3 (lower is better)
Translates to: SGHWDQRETVCH*PSGVPRRPQSH
Trigger: GTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR TCA 72 bp AGGCTGAGGCAAGAGAATCAGGCAGGGAGGTTGCAGTaGGCCGAGATGGCAGCAGTACAGTCCAGCTTTGGC +
Preference number: 3 (lower is better)
Translates to: RLRQENQAGRLQ*AEMAAVQSSFG
Trigger: GCCAAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCTTGCCTCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CCA 72 bp TTGGTCCTGAGTTACCCTCATGGGAGACGAGAGGCATaGGAGGGAAAAGGGGGTACAGACCCGAGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: LVLSYPHGRREA*EGKGGTDPRKE
Trigger: CTCCTTCCTCGGGTCTGTACCCCCTTTTCCCTCCCATGCCTCTCGTCTCCCATGAGGGTAACTCAGGACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 72 bp AATTCTGCTTCTTGGCATGAGCCAGTGCTCTGTGCGTaGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATG +
Preference number: 3 (lower is better)
Translates to: NSASWHEPVLCA*CKASGDRPWLM
Trigger: CATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACTGGCTCATGCCAAGAAGCAGAATT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGTGTGGTCCCAGCTACTaGGCGGCTGAGGCAGGAGGA +
Preference number: 3 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQCGPSY*AAEAGG
Trigger: TCCTCCTGCCTCAGCCGCCAAGTAGCTGGGACCACA...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp CGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: RGPGSSILDEGCLLKHTPFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...AGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 12 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640706.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp CAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: QWSLGPERNCLSLTFWGPFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...GGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACAGGGCATCCGCAATGTaGGTTTCACTGAGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: PCRGYVSSPAHSLPNGFHRASAM*VSLRAA
Trigger: GGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT...GTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR TCA 72 bp TGCCACCCAGGCAGTACAGAAGAGGCTCTGCGGCCCTaGAACTTGACGTTGGCTTTGCCACTGAACTTGCCA +
Preference number: 3 (lower is better)
Translates to: CHPGSTEEALRP*NLTLALPLNLP
Trigger: TGGCAAGTTCAGTGGCAAAGCCAACGTCAAGTTTCAGGGCCGCAGAGCCTCTTCTGTACTGCCTGGGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR GCA 72 bp CCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTaGTGGACTGGAAGCTTCAAGAACAAGACAAATGGG +
Preference number: 3 (lower is better)
Translates to: PCTLQHWICGGA*WTGSFKNKTNG
Trigger: CCCATTTGTCTTGTTCTTGAAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 72 bp CAGATGCTGTCCATGGGCTTCTCTGATGAAGGCGGCTaGCTCACCAGGCTCCTGCAGACCAAGAACTATGAC +
Preference number: 3 (lower is better)
Translates to: QMLSMGFSDEGG*LTRLLQTKNYD
Trigger: GTCATAGTTCTTGGTCTGCAGGAGCCTGGTGAGCCAGCCGCCTTCATCAGAGAAGCCCATGGACAGCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CAA 90 bp CGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: RLHGGWTVLLLHFLFLGRLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp CTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCTCCTCCATTTTTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: LPFSRQVLTEAGAWLLHFFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...AAAATGGAGGAGCCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAG
56% GC, longest homopolymer 8 nt, total homopolymer stretches 23 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp AGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTTCCTGGGTGCAGGGCATCCGCAATGTaGGTTTCACTGAGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: SDMKGGSLCVCVLMFPGCRASAM*VSLRAA
Trigger: GGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT...GCACCCAGGAAACATCAGCACACACACACACAGGGACCCTCCCTTCATGTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR-3UTR CAA 90 bp TGGGCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATGGGCGGCCAGGCAGTTATTTCGTTCCTTTTaGTGGCTGAGTAGTATTCCA +
Preference number: 3 (lower is better)
Translates to: WAARQRGSSHSRRWAARQLFRSF*WLSSIP
Trigger: TGGAATACTACTCAGCCACAAAAAGGAACGAAATAA...CTGCCTGGCCGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR TCA 72 bp GCGGCAACATCAAAGTTTGAATTCTGCTTCTTGGCATaGGCCAGTGCTCTGTGCGTGGTGCAAGGCCAGCGG +
Preference number: 3 (lower is better)
Translates to: AATSKFEFCFLA*ASALCVVQGQR
Trigger: CCGCTGGCCTTGCACCACGCACAGAGCACTGGCTCATGCCAAGAAGCAGAATTCAAACTTTGATGTTGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR GCA 72 bp GAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTaGAGCACTGCCACCCAGGCAGTACAGAAGAGGCTC +
Preference number: 3 (lower is better)
Translates to: EKQCESSDRVGP*STATQAVQKRL
Trigger: GAGCCTCTTCTGTACTGCCTGGGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 72 bp AGGGTCACAATGCTCTTTGGTCCTGAGTTACCCTCATaGGAGACGAGAGGCATGGGAGGGAAAAGGGGGTAC +
Preference number: 3 (lower is better)
Translates to: RVTMLFGPELPS*ETRGMGGKRGY
Trigger: GTACCCCCTTTTCCCTCCCATGCCTCTCGTCTCCCATGAGGGTAACTCAGGACCAAAGAGCATTGTGACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 72 bp AATTGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTaGATGGGACTCCATAGCTCCTTCCCAGGACCCCTC +
Preference number: 3 (lower is better)
Translates to: NCAHLEDVAVTC*MGLHSSFPGPL
Trigger: GAGGGGTCCTGGGAAGGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
3UTR-3UTR CAA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp CGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: RGPGSSILDEGCLLKHTPPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...AGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640706.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
3UTR-3UTR CAA 90 bp TGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: WSLGPERNCLSLTFWGPQPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...CTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp ACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: TFPACWCPTFSSSLALTVFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...AACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
3UTR TCA 72 bp CTCAGTTTCTCCAAGGGTCACAATGCTCTTTGGTCCTaGGTTACCCTCATGGGAGACGAGAGGCATGGGAGG +
Preference number: 3 (lower is better)
Translates to: LSFSKGHNALWS*VTLMGDERHGR
Trigger: CCTCCCATGCCTCTCGTCTCCCATGAGGGTAACTCAGGACCAAAGAGCATTGTGACCCTTGGAGAAACTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR GCA 72 bp ACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCTaGTGGATGGGACTCCATAGCTCCTTCCCAGGACCC +
Preference number: 3 (lower is better)
Translates to: TNCAHLEDVAVT*WMGLHSSFPGP
Trigger: GGGTCCTGGGAAGGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCAATTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
3UTR GCA 72 bp GGCTGCGATTTTTCCTGCTGCTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCTTCTTCACTGGCACTG +
Preference number: 3 (lower is better)
Translates to: GCDFSCCFTFPA*WCPTFSSSLAL
Trigger: CAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR CCA 72 bp GCAGTGGCAGAGTTGAGCAGTGTGAAAAAGACTGCTTaGCCCTTTACAGGGAAAGCAGGTCCACTGTGGCCT +
Preference number: 3 (lower is better)
Translates to: AVAELSSVKKTA*PFTGKAGPLWP
Trigger: AGGCCACAGTGGACCTGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTGCTCAACTCTGCCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CAA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCGGGTCACAATGCTCTTaGGTCCTGAGTTACCCTCAT +
Preference number: 3 (lower is better)
Translates to: REKQCESSDRVGPCSTATGSQCS*VLSYPH
Trigger: ATGAGGGTAACTCAGGACCAAAGAGCATTGTGACCC...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp CTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: LHGGWTVLLLHFLFLGRSLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...AGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp TATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: YHTHAQWSLGPERNCLSLFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...CAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp TTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTAGGGCATCCGCAATGTaGGTTTCACTGAGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: FPACWCPTFSSSLALTVSRASAM*VSLRAA
Trigger: GGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT...AGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR-3UTR CAA 90 bp CTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCAGGGCATCCGCAATGTaGGTTTCACTGAGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: LILDKVSLGVVSRQAGEARASAM*VSLRAA
Trigger: GGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT...GGCCTCCCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
3UTR TCA 72 bp TTGACTGAAGCGGGGGCCTGGCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACACACTCCTGTTCCTTC +
Preference number: 3 (lower is better)
Translates to: LTEAGAWLLHFG*RLFAETHSCSF
Trigger: GAAGGAACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCGCTTCAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640706.1
ENST00000640942.1
3UTR CCA 72 bp AGTTGGCGGCAACATCAAAGTTTGAATTCTGCTTCTTaGCATGAGCCAGTGCTCTGTGCGTGGTGCAAGGCC +
Preference number: 3 (lower is better)
Translates to: SWRQHQSLNSAS*HEPVLCAWCKA
Trigger: GGCCTTGCACCACGCACAGAGCACTGGCTCATGCCAAGAAGCAGAATTCAAACTTTGATGTTGCCGCCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp TCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: SLGPERNCLSLTFWGPQALDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp TCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: SSLALTVSSRDLSGSSETFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...AGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
3UTR TCA 72 bp CCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTaGACTTTTTCTAGGTGGCAGGACAAATTGCGCCCA +
Preference number: 3 (lower is better)
Translates to: PLKRPWLLTVHM*TFSRWQDKLRP
Trigger: TGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
3UTR CCA 72 bp TGCGATTTTTCCTGCTGCTTCACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCTTCACTGGCACTGACA +
Preference number: 3 (lower is better)
Translates to: CDFSCCFTFPAC*CPTFSSSLALT
Trigger: TGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR CAA 90 bp CTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCTCCTCCATTTTTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: LPFSRQVLTEAGAWLLHFLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...AAAATGGAGGAGCCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp CACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: HAQWSLGPERNCLSLTFWLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR TCA 72 bp AACAAAGCAACAGGCTTGAGGGAGCATGAAACACAATaGTACCATTACAACATGCAGCCCAGGGACTGGCCC +
Preference number: 3 (lower is better)
Translates to: NKATGLREHETQ*YHYNMQPRDWP
Trigger: GGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCATGCTCCCTCAAGCCTGTTGCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp TCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: SHTRSVVTGTREKLFVTDLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...GTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp AATTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: NYHTHAQWSLGPERNCLSPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...TGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
3UTR-3UTR CAA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: CELFLGGRTNCAHLEDVAPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
3UTR-3UTR CAA 90 bp GTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTAGCCCAGCACATAGCTaGCCTAATGGCTTTCACTTT +
Preference number: 3 (lower is better)
Translates to: VLSLRRIAGLCTGQFLCLSPAHS*PNGFHF
Trigger: AAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCT...AAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGCTTAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
3UTR GCA 72 bp TCCACATGTGAACTTTTTCTAGGTGGCAGGACAAATTaGGCCCATTTAGAGGATGTGGCTGTAACCTGCTGG +
Preference number: 3 (lower is better)
Translates to: STCELFLGGRTN*AHLEDVAVTCW
Trigger: CCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACATGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
3UTR-3UTR CAA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAATATAGTCCCAGCACTTaGGGAAGTGGGAAGATTGCT +
Preference number: 3 (lower is better)
Translates to: EAVRLGQALILRVSKTKQYSPST*GSGKIA
Trigger: AGCAATCTTCCCACTTCCCAAAGTGCTGGGACTATA...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp CCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: PTFSSSLALTVSSRDLSGLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...GCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
3UTR-3UTR CAA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTGAGTTTGACACCAGTTaGGGCAACATGGTGAAACCC +
Preference number: 3 (lower is better)
Translates to: LRVSKTKQINAFHLTANLEFDTS*GNMVKP
Trigger: GGGTTTCACCATGTTGCCCAAACTGGTGTCAAACTC...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp TCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: SSLALTVSSRDLSGSSETLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...AGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
3UTR TCA 72 bp CTTTCTGCGGGTAGGAATCGCACACTTCGTCAACTGTaGCAAAAGACAGAATTATCACACACACGCTCAGTG +
Preference number: 3 (lower is better)
Translates to: LSAGRNRTLRQL*QKTELSHTRSV
Trigger: CACTGAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCGCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
3UTR-3UTR CAA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAACGGCAACATCAAAGTTaGAATTCTGCTTCTTGGCAT +
Preference number: 3 (lower is better)
Translates to: EAVRLGQALILRVSKTKQRQHQS*NSASWH
Trigger: ATGCCAAGAAGCAGAATTCAAACTTTGATGTTGCCG...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR-3UTR CAA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 3 (lower is better)
Translates to: CELFLGGRTNCAHLEDVALDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
3UTR TCA 72 bp AGGATCACAAAACTAGTTGGCGGCAACATCAAAGTTTaGATTCTGCTTCTTGGCATGAGCCAGTGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: RITKLVGGNIKV*ILLLGMSQCSV
Trigger: CACAGAGCACTGGCTCATGCCAAGAAGCAGAATTCAAACTTTGATGTTGCCGCCAACTAGTTTTGTGATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR GCA 72 bp CTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTaGCAGTCCCAGATCACACATCATCATCGAAGTCTT +
Preference number: 3 (lower is better)
Translates to: LSLLTSVSRLIT*QSQITHHHRSL
Trigger: AAGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 72 bp AGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTaGACATGGCGTCTACAATCAGCACCAGAGCCTTCA +
Preference number: 3 (lower is better)
Translates to: SSETCPCSRFNF*TWRLQSAPEPS
Trigger: TGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
3UTR TCA 72 bp TCACCTTTAAAACAAAGCAACAGGCTTGAGGGAGCATaGAACACAATGATACCATTACAACATGCAGCCCAG +
Preference number: 3 (lower is better)
Translates to: SPLKQSNRLEGA*NTMIPLQHAAQ
Trigger: CTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCATGCTCCCTCAAGCCTGTTGCTTTGTTTTAAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 72 bp CAAAGCCACTTACTTACCCAGGATCACAAAACTAGTTaGCGGCAACATCAAAGTTTGAATTCTGCTTCTTGG +
Preference number: 3 (lower is better)
Translates to: QSHLLTQDHKTS*RQHQSLNSASW
Trigger: CCAAGAAGCAGAATTCAAACTTTGATGTTGCCGCCAACTAGTTTTGTGATCCTGGGTAAGTAAGTGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
3UTR CCA 72 bp TTCTTTATCCACTCATTGCTTGATGGGCAGTTAGGTTaGTTCCACATCTTTGCAATTGTGAGTTGTGCTGCT +
Preference number: 3 (lower is better)
Translates to: FFIHSLLDGQLG*FHIFAIVSCAA
Trigger: AGCAGCACAACTCACAATTGCAAAGATGTGGAACCAACCTAACTGCCCATCAAGCAATGAGTGGATAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR GCA 72 bp ATCCATTCATCTCTCTCCATCTTCAATCTATTTCAATaGCCCATCATCTCTTGCATGGAGGAGTGTAATAAT +
Preference number: 3 (lower is better)
Translates to: IHSSLSIFNLFQ*PIISCMEECNN
Trigger: ATTATTACACTCCTCCATGCAAGAGATGATGGGGCATTGAAATAGATTGAAGATGGAGAGAGATGAATGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR TCA 72 bp TGCTGCAAAAGGTATTATTTCGTTCCTTTTTGTGGCTaGGTAGTATTCCATGGTGTATATATACCACATTTT +
Preference number: 3 (lower is better)
Translates to: CCKRYYFVPFCG*VVFHGVYIPHF
Trigger: AAAATGTGGTATATATACACCATGGAATACTACTCAGCCACAAAAAGGAACGAAATAATACCTTTTGCAGCA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp CAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QGWACETQGSLQRAPDPSTAARS*PLPAGA
Trigger: AGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGT...GGAGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CCA 90 bp CCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PESCTPRLHGGWTVLLLHRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CCA 90 bp AGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCGTGGCCCGAGGAAGCTaGACAGCGGCAGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SHPSPARHGCTEAGRCSCVARGS*TAAVGL
Trigger: CAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCAC...GCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CCA 90 bp CCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACGTGGCCCGAGGAAGCTaGACAGCGGCAGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PESCTPRLHGGWTVLLLHVARGS*TAAVGL
Trigger: CAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCAC...GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR TCA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCGGCCTGGGGTCCCTCTaGAGAGACCTTGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCGLGSL*RDLGCS
Trigger: TGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGCC...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR TCA 90 bp TCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCGGCAGTGGGCCTGCTaGGGCCTTCTCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SEPPESCTPRLHGGWTVLRQWAC*GLLLRP
Trigger: AGGCCTCAAGAGAAGGCCTCAGCAGGCCCACTGCCG...GAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR GCA 90 bp CGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: RVLHATAARRLDGAPAPLEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...AAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGAGGACCGCCTGCCCTaGCTGGGCCTTGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SALCVVQGQRRPTLADVGEDRLP*LGLGWA
Trigger: GGCCCAGCCAAGGCCCAGGCAGGGCAGGCGGTCCTC...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTCCCAGGAGGACCGCCTaGCCTGCCTGGGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPPRRTA*PAWALA
Trigger: AGCCAAGGCCCAGGCAGGGCAGGCGGTCCTCCTGGG...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CCA 90 bp CTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: LRATRVLHATAARRLDGAPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...AGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR CCA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCCTGGACCAGCTGGCCTaGGGTCCCTCTGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCLDQLA*GPSEET
Trigger: GGTCTCTTCAGAGGGACCCCAGGCCAGCTGGTCCAG...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CCA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCCTGTGCTGGACCAGCTaGCCTGGGGTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCLCWTS*PGVPLK
Trigger: CTTCAGAGGGACCCCAGGCCAGCTGGTCCAGCACAG...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR TCA 90 bp TCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCGCTGAGGCCTTCTCTTaGGGCCTGTGCTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SEPPESCTPRLHGGWTVLAEAFS*GLCSGG
Trigger: ACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGC...GAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR TCA 90 bp ACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCATCTCAGACCCAGATGTaGCGGGGTGTGTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: TRVLHATAARRLDGAPAPSQTQM*RGVWPE
Trigger: CTCGGGCCACACACCCCGTCACATCTGGGTCTGAGA...TGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR TCA 90 bp CTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCAGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LGSPGDLRATRVLHATAAASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...TGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp GGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GPQATSEPPESCTPRLHGASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGTGGGGGTGGGGGCAGTaGCTGACGCCCAGTGGACTC +
Preference number: 4 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGWGWGQ*LTPSGL
Trigger: GAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCA...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCAGGCTGACCCGCGGCTaGTTGAGTCCCTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SEPPESCTPRLHGGWTVLRLTRG*LSPSPR
Trigger: TCTGGGAGAGGGACTCAATCAGCCGCGGGTCAGCCT...GAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp GGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAAGGCACTCGGCAGGCTaGGGCAAGAGAATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GPQATSEPPESCTPRLHGRHSAG*GKRIRQ
Trigger: CTGCCTGATTCTCTTGCCTCAGCCTGCCGAGTGCCT...TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
ENST00000640320.1
CDS-3UTR GCA 90 bp TCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: SLTFWGPQATSEPPESCTEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...CGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGACCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GPQATSEPPESCTPRLHGPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR GCA 90 bp CAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: QGWACETQGSLQRAPDPSPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...GGAGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PESCTPRLHGGWTVLLLHPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR GCA 90 bp GTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTCAGGGGCCCACCCTCTaGCCAGGGAGTCCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: VCGPRKLDSGSGPAEAFSQGPTL*PGSPCV
Trigger: GACGCAAGGACTCCCTGGGCAGAGGGTGGGCCCCTG...AGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCACACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RATRVLHATAARRLDGAPRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...AGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp CTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: LRATRVLHATAARRLDGARHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...AGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GPQATSEPPESCTPRLHGKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp ACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTCCTGACCCCTCCCTaGAGGGGCTACGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TRVLHATAARRLDGAPAPLLTPP*RGYVSS
Trigger: GCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG...TGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTACACACCACCTGGCTaGCTGGTGTCGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PQSHPSPARHGCTEAGRCYTPPG*LVSQWQ
Trigger: CTGCCACTGCGACACCAGGCAGCCAGGTGGTGTGTA...GCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp GTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: VCGPRKLDSGSGPAEAFSRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...AGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCACACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CCA 90 bp CCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCTGATGAAGGCGGCTaGCTCACCAGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PQSHPSPARHGCTEAGRCSDEGG*LTRLLQ
Trigger: CTGCAGGAGCCTGGTGAGCCAGCCGCCTTCATCAGA...GCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CAA 72 bp CCAGGACCAGGGGCCCACCCTCTGCCCAGGGAGTCCTaGCGTCCCATGAGGTCTTCCCGCAAGGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PGPGAHPLPRES*RPMRSSRKASQ
Trigger: CTGAGAGGCCTTGCGGGAAGACCTCATGGGACGCAAGGACTCCCTGGGCAGAGGGTGGGCCCCTGGTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PFWGPQATSEPPESCTPRQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...CCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR TCA 90 bp TCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCATCCCCCGCCGTTGTaGCCACTTTTGCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: SEPPESCTPRLHGGWTVLHPPPL*PLLPTS
Trigger: AGAGGTGGGCAAAAGTGGTCACAACGGCGGGGGATG...GAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PESCTPRLHGGWTVLLLHTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp TCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SPGDLRATRVLHATAARRTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp TCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: SPGDLRATRVLHATAARRGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...CCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR GCA 90 bp GGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGATCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GPQATSEPPESCTPRLHGSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR GCA 90 bp CGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCCTTGCTTAGCCTGTaGTGGACCAGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RVLHATAARRLDGAPAPLPLLSL*WTSWPG
Trigger: CCCAGGCCAGCTGGTCCAGCACAGGCTAAGCAAGGG...AAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR GCA 90 bp AGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCTGGGGGTCCCTTaGTTAGCCTGTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: RATRVLHATAARRLDGAPALGVP*LACAGP
Trigger: TGGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGC...AGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR GCA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTGGGTCGAGGATTCTGTaGCTCCAGGACCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALGSRIL*LQDQGP
Trigger: GGGCCCCTGGTCCTGGAGGCACAGAATCCTCGACCC...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RATRVLHATAARRLDGAPKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...AGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp CCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCTGATGTTTCCTGGGTaGCCTGGCTCCTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PPESCTPRLHGGWTVLLLLMFPG*PGSLQQ
Trigger: CTGCTGCAAGGAGCCAGGGCACCCAGGAAACATCAG...GAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGCCCGCTGACGACTCCTaGCCGGACAAAGGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGPADDS*PDKGPR
Trigger: ACGGGGACCTTTGTCCGGGCAGGAGTCGTCAGCGGG...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTGAGCCTGCCGGGTTCTaGAGCTGCAGAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALEPAGF*SCRGGS
Trigger: GCTGCCACCTCTGCAGCTGCAGAACCCGGCAGGCTC...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTCAAGCGCGTGCGCTCTaGATTTGTCCCGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: SPALQSAEFSWRQGLLPCQARAL*ICPAAA
Trigger: GGCCGCGGCGGGACAAATGCAGAGCGCACGCGCTTG...ACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SALCVVQGQRRPTLADVGRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCTTGTCACTGACCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCLSLTF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAA...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp CCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTTGTCACTGACCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: PQSHPSPARHGCTEAGRCLSLTF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAA...GCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp CGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTGTTTCCTGGGTGCCCTaGCTCCTTGCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RVLHATAARRLDGAPAPLVSWVP*LLAAGL
Trigger: CAGCCCTGCTGCAAGGAGCCAGGGCACCCAGGAAAC...AAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp TCCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLLGSPGDLRATRVLHATQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...CGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR TCA 90 bp TCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTGGTGGGGGCAGTGACTaGCGCCCAGTGGACTCCCAA +
Preference number: 4 (lower is better)
Translates to: SPALQSAEFSWRQGLLPCGGGSD*RPVDSQ
Trigger: TTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACC...ACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGCAGACCAAGAACTATaGCATCGGAGCGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GPQATSEPPESCTPRLHGADQEL*HRSGSG
Trigger: TCCAGAGCCGCTCCGATGTCATAGTTCTTGGTCTGC...TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp TGGGCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATGGGCGGCCAGGCAGAGGCACTCGGCAGGCTaGGGCAAGAGAATCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WAARQRGSSHSRRWAARQRHSAG*GKRIRQ
Trigger: CTGCCTGATTCTCTTGCCTCAGCCTGCCGAGTGCCT...CTGCCTGGCCGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp ACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TFWGPQATSEPPESCTPRTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR GCA 90 bp CGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: RLHGGWTVLLLHFLFLGREPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...CCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp TCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SLTFWGPQATSEPPESCTRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...CGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR GCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGCCCGCTGACGACTCCTaGCCGGACAAAGGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: SALCVVQGQRRPTLADVGPADDS*PDKGPR
Trigger: ACGGGGACCTTTGTCCGGGCAGGAGTCGTCAGCGGG...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGCAGTGCCCTTGCTGTaGCCTGGCTCCTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLAVPLL*PGSSDR
Trigger: CCTGTCAGAGGAGCCAGGGCACAGCAAGGGCACTGC...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTCTGGACCAGCTGGCCTaGGGTCCCTCTGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPLDQLA*GPSEET
Trigger: GGTCTCTTCAGAGGGACCCCAGGCCAGCTGGTCCAG...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CCA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGCTGGACCAGCTGGCCTaGGGTCCCTCTGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGLDQLA*GPSEET
Trigger: GGTCTCTTCAGAGGGACCCCAGGCCAGCTGGTCCAG...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTCTGTGCTGGACCAGCTaGCCTGGGGTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPLCWTS*PGVPLK
Trigger: CTTCAGAGGGACCCCAGGCCAGCTGGTCCAGCACAG...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTGACCCTGGTCCTGGCTaGCCAAGGCAGCAGGGTATG +
Preference number: 4 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPDPGPG*PRQQGM
Trigger: CATACCCTGCTGCCTTGGCCAGCCAGGACCAGGGTC...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp TGGGCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATGGGCGGCCAGGCAGATCTCAGACGATGGGTaGCCGGGCAGAGACGCTCCT +
Preference number: 4 (lower is better)
Translates to: WAARQRGSSHSRRWAARQISDDG*PGRDAP
Trigger: AGGAGCGTCTCTGCCCGGCCACCCATCGTCTGAGAT...CTGCCTGGCCGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp CTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LTFWGPQATSEPPESCTPQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...TGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR TCA 90 bp CGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RVLHATAARRLDGAPAPLQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...AAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR TCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGGCCTGGGGTCCCTCTaGAGAGACCTTGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SALCVVQGQRRPTLADVGGLGSL*RDLGCS
Trigger: TGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGCC...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTTGGGGGTGGGGGCAGTaGCTGACGCCCAGTGGACTC +
Preference number: 4 (lower is better)
Translates to: LLRPSLEACALGVPCLACWGWGQ*LTPSGL
Trigger: GAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCA...ACAGGCTAAGCAAGGGACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PPESCTPRLHGGWTVLLLRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...GAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
ENST00000640320.1
CDS-3UTR GCA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACGATGTGGCTGTAACCTaGTGGATGGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: PESCTPRLHGGWTVLLLHDVAVT*WMGLHS
Trigger: GCTATGGAGTCCCATCCAGCAGGTTACAGCCACATC...GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR GCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGCTCTGGGGGTCCCTTaGTTAGCCTGTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLALGVP*LACAGP
Trigger: TGGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGC...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR GCA 90 bp CCTGGTCCTGGCTGGCCAAGGCAGCAGGGTATGTGTTTCGGGTCACTCACAGGGCAGCAGGGCTGGGCCTaGGAGACCCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PGPGWPRQQGMCFGSLTGQQGWA*ETQGSL
Trigger: CAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTGCTG...CCCTGTGAGTGACCCGAAACACATACCCTGCTGCCTTGGCCAGCCAGGACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTGACTCCCAACTGCAGTaGCCTTGCTGTGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPDSQLQ*PCCALA
Trigger: AGCCAGGGCACAGCAAGGGCACTGCAGTTGGGAGTC...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGTGCTCTGTGCGTGGTaGAAGGCCAGCGGAGACCGA +
Preference number: 4 (lower is better)
Translates to: SALCVVQGQRRPTLADVGVLCAW*KASGDR
Trigger: TCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp ACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TPPCRGYVSSPAHSLPNGRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...GCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GCCTGTCCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGGTGGCTGTAACCTGCTaGATGGGACTCCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: ACPFWGPQATSEPPESCTVAVTC*MGLHSS
Trigger: GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCAC...CGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTGGGAAAGGGGTGCGCTaGCTCCATTCTGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALGKGVR*LHSATS
Trigger: GGAGGTAGCAGAATGGAGCCAGCGCACCCCTTTCCC...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTGGCGGATCACTCGTGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAATCCTTGCAGCAGGGCTaGGCCTGCGAGACCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LADHSWLGAGDQPGQHSESLQQG*ACETQG
Trigger: GCCTTGGGTCTCGCAGGCCCAGCCCTGCTGCAAGGA...TTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCACGAGTGATCCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGGTGGTCCCAGCTACTTaGCGGCTGAGGCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGVVPAT*RLRQED
Trigger: ATCCTCCTGCCTCAGCCGCCAAGTAGCTGGGACCAC...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: VSVRASFSAFFQDQGLGCTAARS*PLPAGA
Trigger: AGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGT...GCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTATGAGACGATGGCCCTaGCCCATCGTCAGGTTGACC +
Preference number: 4 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLMRRWP*PIVRLT
Trigger: GGTCAACCTGACGATGGGTCAGGGCCATCGTCTCAT...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTGAGGCTCTGCGGCCCTaGAACTTGACGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALEALRP*NLTLAL
Trigger: CAAAGCCAACGTCAAGTTTCAGGGCCGCAGAGCCTC...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRATRVLHATAARRLDGAGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...AGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp ACTCGGCAGGCTGAGGCAAGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: TRQAEARESGREVAVSRDEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...ATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCTTGCCTCAGCCTGCCGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: LGPERNCLSLTFWGPQATEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...GGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GGCAGCAGGGTATGTGTTTCGGGTCACTCACAGGGCTCAGCACCACTCCTCATGGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: GSRVCVSGHSQGSAPLLMEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...CATGAGGAGTGGTGCTGAGCCCTGTGAGTGACCCGAAACACATACCCTGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: LHGGWTVLLLHFLFLGRSEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...AGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SALCVVQGQRRPTLADVGPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTCTGGGAGGCAGAGGTTaGAGTGAGCCGAAATCACGC +
Preference number: 4 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLLGGRG*SEPKSR
Trigger: GCGTGATTTCGGCTCACTGCAACCTCTGCCTCCCAG...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTTACACACCACCTGGCTaGCTGGTGTCGCAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SPALQSAEFSWRQGLLPCYTPPG*LVSQWQ
Trigger: CTGCCACTGCGACACCAGGCAGCCAGGTGGTGTGTA...ACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp AGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SHPSPARHGCTEAGRCSCTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...GCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
CDS-3UTR CCA 90 bp GCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCTCCTCCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: APLPFSRQVLTEAGAWLLRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...GAGGAGCCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CCA 90 bp GCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCCCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: AARRLDGAPAPLPFSRQVPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...GACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR CCA 90 bp GCCTGTCCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCTCTGAAGAGACCTTaGCTGCTCACTGTCCACATG +
Preference number: 4 (lower is better)
Translates to: ACPFWGPQATSEPPESCTPLKRP*LLTVHM
Trigger: CATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGG...CGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGGACAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGCACTGGATATGCGGTaGGGCCTGCTGGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: SALCVVQGQRRPTLADVGALDMR*GLLDWK
Trigger: CTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGC...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp ACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACAGCACCACTCCTCATaGCTTCCTTACTGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: TRVLHATAARRLDGAPAPQHHSS*LPYCFG
Trigger: GCCGAAACAGTAAGGAAGCCATGAGGAGTGGTGCTG...TGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp ACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTGGACTGGAAGCTTTCTCAGACCCAGATGTaGCGGGGTGTGTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: TLHSAALDMRWGLLDWKLSQTQM*RGVWPE
Trigger: CTCGGGCCACACACCCCGTCACATCTGGGTCTGAGA...AAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTGAAACTGTTTGTCACTaGCCTTCTGGGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALETVCH*PSGVPR
Trigger: CCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTC...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GCACTGAGTGAACCAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTGTGTGTGTGTGTGCTaGTGTTTCCTGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: ALSEPDSVCNPGTSGGRGCVCVC*CFLGAL
Trigger: CAGGGCACCCAGGAAACATCAGCACACACACACACA...GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTGGTTCACTCAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp TCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTGCACTCCAGCCTAGGTaGCAGAGTGACACCCCATCT +
Preference number: 4 (lower is better)
Translates to: SPALQSAEFSWRQGLLPCALQPR*QSDTPS
Trigger: AGATGGGGTGTCACTCTGTCACCTAGGCTGGAGTGC...ACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTGAACCAAAGATGCTCTaGAAGTTGGGTGTCGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPEPKML*KLGVGR
Trigger: CCGGCCGACACCCAACTTTCAGAGCATCTTTGGTTC...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp ACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCATTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TRVLHATAARRLDGAPAPFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...TGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
CDS-3UTR GCA 90 bp CTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCAGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LTFWGPQATSEPPESCTPGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...TGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
CDS-3UTR GCA 90 bp GACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: DGAPAPLPFSRQVLTEAGEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...CCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp ACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCAGGTGGCAGGACAAATTaGGCCCATTTAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: TRVLHATAARRLDGAPAPGGRTN*AHLEDV
Trigger: CACATCCTCTAAATGGGCGCAATTTGTCCTGCCACC...TGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR GCA 90 bp CAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCCGACTCTCTGAGGGCTaGGATTTTTCCTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: QGWACETQGSLQRAPDPSRLSEG*DFSCKK
Trigger: CTTTTTGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...GGAGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520698.5
ENST00000638829.1
CDS-3UTR GCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTACATCGGGAAAGGGGTaGGCTGGCTCCATTCTGCTA +
Preference number: 4 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLTSGKG*AGSILL
Trigger: TAGCAGAATGGAGCCAGCGCACCCCTTTCCCGATGT...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCCAGGCCCAGGAGGACCGCCTaGCCTGCCTGGGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KSNVKAAIEWVPAALPPRPRRTA*PAWALA
Trigger: AGCCAAGGCCCAGGCAGGGCAGGCGGTCCTCCTGGG...CCTGGGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp ACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCAGACCCAAGGCTCACTaGAGCGCGCTCCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: TPPCRGYVSSPAHSLPNGRPKAH*SALLTP
Trigger: AGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCT...GCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTGCAAACCCTGCACTCTaGAGCACTGGATATGCGGTG +
Preference number: 4 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALANPAL*STGYAV
Trigger: CACCGCATATCCAGTGCTGCAGAGTGCAGGGTTTGC...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGATACCATTACAACATaGAGCCCAGGGACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLDTITT*SPGTGP
Trigger: CGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATC...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCGTGTCTGGGGAACTCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PPESCTPRLHGGWTVLLLVSGEL*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGAGTTCCCCAGACAC...GAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QVSVRASFSAFFQDQGLGRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...CCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTGTGGCTGTAACCTGCTaGATGGGACTCCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALVAVTC*MGLHSS
Trigger: GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCAC...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGCTGTGCTGGACCAGCTaGCCTGGGGTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQLCWTS*PGVPLK
Trigger: CTTCAGAGGGACCCCAGGCCAGCTGGTCCAGCACAG...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CCA 90 bp TCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCACGCTCAGTGGTCACTaGGACCAGAGAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: SEPPESCTPRLHGGWTVLTLSGH*DQRETV
Trigger: AACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGT...GAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTAAAGCAGCGATAGAGTaGGTCCCTGCAGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPKAAIE*VPAALP
Trigger: TGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTT...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: DLLGSPGDLRATRVLHATLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...CGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
CDS-3UTR TCA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR TCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGGCTGAGGCCTTCTCTTaGGGCCTGTGCTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWAEAFS*GLCSGG
Trigger: ACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGC...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR TCA 90 bp GTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTTCTCATGTCATCAGGTaGTCCATCTCCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: VCGPRKLDSGSGPAEAFSSHVIR*SISWGP
Trigger: AGGTCCCCAGGAGATGGATCACCTGATGACATGAGA...AGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LHIPSLLVSHVFFFTGTDTAARS*PLPAGA
Trigger: AGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGT...GTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCTTCAGGGCGGCCCGCTaGCGACTCCTGCCCGGACAA +
Preference number: 4 (lower is better)
Translates to: REKQCESSDRVGPCSTATFRAAR*RLLPGQ
Trigger: TTGTCCGGGCAGGAGTCGTCAGCGGGCCGCCCTGAA...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CTCCTGACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLTPPCRGYVSSPAHSLPTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...AGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GACCCTGGTCCTGGCTGGCCAAGGCAGCAGGGTATGTGTTTCGGGTCACTCACACCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: DPGPGWPRQQGMCFGSLTPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...TGTGAGTGACCCGAAACACATACCCTGCTGCCTTGGCCAGCCAGGACCAGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp GTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTGATGTGGCTGTAACCTaGTGGATGGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: VCGPRKLDSGSGPAEAFSDVAVT*WMGLHS
Trigger: GCTATGGAGTCCCATCCAGCAGGTTACAGCCACATC...AGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR GCA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGCTCTGGGGGTCCCTTaGTTAGCCTGTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQALGVP*LACAGP
Trigger: TGGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGC...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR GCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACCAGCAGGGCTGGGCCTaGGAGACCCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PCRGYVSSPAHSLPNGFHQQGWA*ETQGSL
Trigger: CAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTGCTG...GTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGATCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: GPQATSEPPESCTPRLHGSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CCA 90 bp GTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTCCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: VVGFLLGLRRLTKGIRNVPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...AACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGCCCACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCCCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: VSVRASFSAFFQDQGLGCPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...GCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp CTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTGGGAAAGGGGTGCGCTaGCTCCATTCTGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: LLRPSLEACALGVPCLACGKGVR*LHSATS
Trigger: GGAGGTAGCAGAATGGAGCCAGCGCACCCCTTTCCC...ACAGGCTAAGCAAGGGACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTTGTCACTGACCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: RLHGGWTVLLLHFLFLGRLSLTF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAA...CCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp CTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCTCCTTGCAGCAGGGCTaGGCCTGCGAGACCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPAGATLAAQHIACLMAFSLQQG*ACETQG
Trigger: GCCTTGGGTCTCGCAGGCCCAGCCCTGCTGCAAGGA...GAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTTCCTTGCAGCAGGGCTaGGCCTGCGAGACCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VVGFLLGLRRLTKGIRNVSLQQG*ACETQG
Trigger: GCCTTGGGTCTCGCAGGCCCAGCCCTGCTGCAAGGA...AACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGCCCACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp ACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTGGACTGGAAGCTTGTGGTCCCAGCTACTTaGCGGCTGAGGCAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TLHSAALDMRWGLLDWKLVVPAT*RLRQED
Trigger: ATCCTCCTGCCTCAGCCGCCAAGTAGCTGGGACCAC...AAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CCAATCCCAGTTGACTGGACCAGAGGTGGGCATCCGAGTCAGCCTGGGCCAACCGCATCCGAGTCAGCCTaGGCCAACCAGGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PIPVDWTRGGHPSQPGPTASESA*ANQVAS
Trigger: AGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGC...GGTTGGCCCAGGCTGACTCGGATGCCCACCTCTGGTCCAGTCAACTGGGATTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp CGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGGCAGACCCTGGTCCTaGCTGGCCAAGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RGPGSSILDEGCLLKHTPGRPWS*LAKAAG
Trigger: CCCTGCTGCCTTGGCCAGCCAGGACCAGGGTCTGCC...AGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp CAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGAGCACCCGAGAACGCTaGAGCGACGCCATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QVSVRASFSAFFQDQGLGSTRER*SDAIPA
Trigger: AGCAGGGATGGCGTCGCTTCAGCGTTCTCGGGTGCT...CCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AARRLDGAPAPLPFSRQVQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...GACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR TCA 90 bp GGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGCGGCAGTGGGCCTGCTaGGGCCTTCTCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GFRQKRQETRVGRWAFCGRQWAC*GLLLRP
Trigger: AGGCCTCAAGAGAAGGCCTCAGCAGGCCCACTGCCG...CCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCGAAACTGTTTGTCACTaGCCTTCTGGGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: CLSLTFWGPQATSEPPESETVCH*PSGVPR
Trigger: CCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTC...GGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR TCA 90 bp CGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGGAAACTGTTTGTCACTaGCCTTCTGGGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RLHGGWTVLLLHFLFLGRETVCH*PSGVPR
Trigger: CCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTC...CCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR TCA 90 bp AGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGYVSSPAHSLPNGFHFLTAARS*PLPAGA
Trigger: AGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGT...GAGAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTTTGAGCTCAGGAGTTTaGGACAAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: VCGPRKLDSGSGPAEAFSLSSGV*DKPGQH
Trigger: ATGTTGCCCAGGCTTGTCTCAAACTCCTGAGCTCAA...AGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGCGTTGGCTTTGCCACTaGACTTGCCATGACTGCACA +
Preference number: 4 (lower is better)
Translates to: SALCVVQGQRRPTLADVGRWLCH*TCHDCT
Trigger: TGTGCAGTCATGGCAAGTTCAGTGGCAAAGCCAACG...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGGGAAGAGGCGGCAGCTaGAGCAGCGTAGCACCCGAG +
Preference number: 4 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSGRGGS*SSVAPE
Trigger: CTCGGGTGCTACGCTGCTGCAGCTGCCGCCTCTTCC...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: AARRLDGAPAPLPFSRQVGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...GACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR GCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTGGTGGCAGGACAAATTaGGCCCATTTAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPGGRTN*AHLEDV
Trigger: CACATCCTCTAAATGGGCGCAATTTGTCCTGCCACC...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR GCA 90 bp TCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTGGTTCTGACACTTTCTaGTGGAAGCTGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPALQSAEFSWRQGLLPCGSDTF*WKLSGW
Trigger: CCAGCCTGACAGCTTCCAGCAGAAAGTGTCAGAACC...ACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: DGAPAPLPFSRQVLTEAGRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...CCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp CTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCCTCCTGACCCCTCCCTaGAGGGGCTACGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPAGATLAAQHIACLMAFLLTPP*RGYVSS
Trigger: GCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG...GAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCCTCCTGACCCCTCCCTaGAGGGGCTACGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSVRASFSAFFQDQGLGCLLTPP*RGYVSS
Trigger: GCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG...GCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACAGACCCAAGGCTCACTaGAGCGCGCTCCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: PCRGYVSSPAHSLPNGFHRPKAH*SALLTP
Trigger: AGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCT...GTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGCAGCAGGGCTGGGCCTaGGAGACCCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GIRNVGFTESCLLVSSPLQQGWA*ETQGSL
Trigger: CAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTGCTG...CAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTTCCTGGGTGCCAGCAGGGCTGGGCCTaGGAGACCCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SDMKGGSLCVCVLMFPGCQQGWA*ETQGSL
Trigger: CAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTGCTG...GCACCCAGGAAACATCAGCACACACACACACAGGGACCCTCCCTTCATGTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGGCCGGGTTCTGCAGCTaGAGAGGTGGCAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSAGFCS*RGGSTE
Trigger: CTCGGTGCTGCCACCTCTGCAGCTGCAGAACCCGGC...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTGCCCCATCATCTCTTaGATGGAGGAGTGTAATAAT +
Preference number: 4 (lower is better)
Translates to: PQSHPSPARHGCTEAGRCCPIIS*MEECNN
Trigger: ATTATTACACTCCTCCATGCAAGAGATGATGGGGCA...GCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCCAGCTCCGTCCAAGTTaGTGCAAAAGGTATTATTTC +
Preference number: 4 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCQLRPS*CKRYYF
Trigger: GAAATAATACCTTTTGCAGCAACTTGGACGGAGCTG...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: RATRVLHATAARRLDGAPSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...AGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CCA 90 bp AGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACCCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: RASAMLVSLRAASWSLHHPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...GTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp CGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGGTGGCTGTAACCTGCTaGATGGGACTCCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: RLHGGWTVLLLHFLFLGRVAVTC*MGLHSS
Trigger: GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCAC...CCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CCA 90 bp TCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGTCCTTGCAGCAGGGCTaGGCCTGCGAGACCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SVRASFSAFFQDQGLGCKSLQQG*ACETQG
Trigger: GCCTTGGGTCTCGCAGGCCCAGCCCTGCTGCAAGGA...CTTGCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGTCAGGTTGACCTGCTaGCCAACCTCAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SALCVVQGQRRPTLADVGVRLTC*PTSVSP
Trigger: TGGAGAAACTGAGGTTGGCCAGCAGGTCAACCTGAC...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGAGCGGAGACCGACCTTaGCTGATGTGGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSSGDRP*LMWGWG
Trigger: CCCCCACCCCCACATCAGCCAAGGTCGGTCTCCGCT...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp ACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTGGACTGGAAGCTTAGATGCTCTGAAAGTTaGGTGTCGGCCGGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: TLHSAALDMRWGLLDWKLRCSES*VSAGRS
Trigger: ACTGCGCCCGGCCGACACCCAACTTTCAGAGCATCT...AAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGAAAGCAGGTCCACTGTaGCCTGTGAGGACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RLHGGWTVLLLHFLFLGRKAGPL*PVRTRA
Trigger: AGCTCTCGTCCTCACAGGCCACAGTGGACCTGCTTT...CCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTATCTCAGACGATGGGTaGCCGGGCAGAGACGCTCCT +
Preference number: 4 (lower is better)
Translates to: LHGGWTVLLLHFLFLGRSISDDG*PGRDAP
Trigger: AGGAGCGTCTCTGCCCGGCCACCCATCGTCTGAGAT...AGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CAA 72 bp GTAAGCCAGCCCCTCTCTTCTGAGACCCAATCCCAGTaGACTGGACCAGAGGTGGGCATCCGAGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VSQPLSSETQSQ*TGPEVGIRVSL
Trigger: CAGGCTGACTCGGATGCCCACCTCTGGTCCAGTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGGCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR TCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCAGCACCCGAGAACGCTaGAGCGACGCCATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSSTRER*SDAIPA
Trigger: AGCAGGGATGGCGTCGCTTCAGCGTTCTCGGGTGCT...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR TCA 90 bp GCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCTCCTCCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: APLPFSRQVLTEAGAWLLQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...GAGGAGCCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR TCA 90 bp GGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GAPAPLPFSRQVLTEAGAQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...GGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR TCA 90 bp CTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LHGGWTVLLLHFLFLGRSQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...AGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR TCA 90 bp CGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGGCCTGGGGTCCCTCTaGAGAGACCTTGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGPGSSILDEGCLLKHTPGLGSL*RDLGCS
Trigger: TGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGCC...AGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR TCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCGCTGAGGCCTTCTCTTaGGGCCTGTGCTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSAEAFS*GLCSGG
Trigger: ACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGC...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR TCA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCTCTCAGACCCAGATGTaGCGGGGTGTGTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: REKQCESSDRVGPCSTATSQTQM*RGVWPE
Trigger: CTCGGGCCACACACCCCGTCACATCTGGGTCTGAGA...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTCCTACAAAAGAATTTTaGGCAGAAGGGCCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPPTKEF*AEGPRD
Trigger: GTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGG...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp ACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTGGACTGGAAGCTTGAAACTGTTTGTCACTaGCCTTCTGGGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TLHSAALDMRWGLLDWKLETVCH*PSGVPR
Trigger: CCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTC...AAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLCTGQFLCLLPGSGVRVASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...CACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PCRGYVSSPAHSLPNGFHASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...GTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ASWSLHHCSSLISKPSAATAARS*PLPAGA
Trigger: AGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGT...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCGTGCCCTGGCTCCTCTaGCAGGCAGAGCAAACCCTG +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSVPWLL*QAEQTL
Trigger: CAGGGTTTGCTCTGCCTGTCAGAGGAGCCAGGGCAC...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GAPAPLPFSRQVLTEAGATEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...GGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp AGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: RGYVSSPAHSLPNGFHFLEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...GAGAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: RRIAGLCTGQFLCLLPGSEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...TGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PCRGYVSSPAHSLPNGFHPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...GTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GLCTGQFLCLLPGSGVRVPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...CACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTCCCTTGCTTAGCCTGTaGTGGACCAGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLPLLSL*WTSWPG
Trigger: CCCAGGCCAGCTGGTCCAGCACAGGCTAAGCAAGGG...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTCAGGGGCCCACCCTCTaGCCAGGGAGTCCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTQGPTL*PGSPCV
Trigger: GACGCAAGGACTCCCTGGGCAGAGGGTGGGCCCCTG...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GPERNCLSLTFWGPQATSKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: DGAPAPLPFSRQVLTEAGKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...CCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp ACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TGTREKLFVTDLLGSPGDKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...GTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GCACTGAGTGAACCAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCGCCCAGCACATAGCTTaGCTAATGGCTTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: ALSEPDSVCNPGTSGGRGAQHIA*LMAFTF
Trigger: GAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGC...GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTGGTTCACTCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp AGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACCTCCTGACCCCTCCCTaGAGGGGCTACGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RASAMLVSLRAASWSLHHLLTPP*RGYVSS
Trigger: GCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG...GTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGCTCCTGACCCCTCCCTaGAGGGGCTACGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GIRNVGFTESCLLVSSPLLLTPP*RGYVSS
Trigger: GCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG...CAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCGTGCTCTGTGCGTGGTaGAAGGCCAGCGGAGACCGA +
Preference number: 4 (lower is better)
Translates to: REKQCESSDRVGPCSTATVLCAW*KASGDR
Trigger: TCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTCAGCTCTCCAGAGCCTaGCGGGTTCTGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLQLSRA*RVLQLQ
Trigger: CTGCAGCTGCAGAACCCGGCAGGCTCTGGAGAGCTG...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCTTTAACTTTTGGACATaGCGTCTACAATCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PPESCTPRLHGGWTVLLLFNFWT*RLQSAP
Trigger: TGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAA...GAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
CDS-3UTR CCA 90 bp AGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RGYVSSPAHSLPNGFHFLRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...GAGAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp TCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSSWESFSRYFSQRLSEGRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...GCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000640942.1
CDS-3UTR CCA 90 bp TTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACACGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: FTFPACWCPTFSSSLALTRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...TGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGCCTCTGAAGAGACCTTaGCTGCTCACTGTCCACATG +
Preference number: 4 (lower is better)
Translates to: RLHGGWTVLLLHFLFLGRPLKRP*LLTVHM
Trigger: CATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGG...CCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CCA 90 bp GCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTGTGCTGATGTTTCCTaGGTGCCCTGGCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: AARRLDGAPAPLPFSRQVCADVS*VPWLLA
Trigger: TGCAAGGAGCCAGGGCACCCAGGAAACATCAGCACA...GACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTCATGCTGGGACTCCCTaGAAGGGCTCGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLHIPSLLVSHVFFFTGTHAGTP*KGSLQA
Trigger: GGCCTGCAGCGAGCCCTTCCAGGGAGTCCCAGCATG...AGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR CCA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTCCAGTGCTCTGTGCGTaGTGCAAGGCCAGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLPVLCA*CKASGD
Trigger: GTCTCCGCTGGCCTTGCACCACGCACAGAGCACTGG...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTAGTTCAAGACCAGCCTaGCCAACATGGGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LLRPSLEACALGVPCLACSSRPA*PTWGSP
Trigger: AGGGCTTCCCCATGTTGGCCAGGCTGGTCTTGAACT...ACAGGCTAAGCAAGGGACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCCAGGCTGCAGCTGCAGAGGTaGCAGCACCGAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KSNVKAAIEWVPAALPPRLQLQR*QHRAPC
Trigger: ACAGGGAGCTCGGTGCTGCCACCTCTGCAGCTGCAG...CCTGGGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CCCCTCTCTTCTGAGACCCAATCCCAGTTGACTGGACCAGAGGTGGGCATCCGAGCATCCGAGTCAGCCTaGGCCAACCAGGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLSSETQSQLTGPEVGIRASESA*ANQVAS
Trigger: AGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGC...TCGGATGCCCACCTCTGGTCCAGTCAACTGGGATTGGGTCTCAGAAGAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp CCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTGGCAGACCCTGGTCCTaGCTGGCCAAGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PVLGSPFLDTSASDSLRAGRPWS*LAKAAG
Trigger: CCCTGCTGCCTTGGCCAGCCAGGACCAGGGTCTGCC...AGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: SALCVVQGQRRPTLADVGLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VVGFLLGLRRLTKGIRNVQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...AACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGCCCACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp CCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PERNCLSLTFWGPQATSEQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...CTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR TCA 90 bp CAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QVSVRASFSAFFQDQGLGQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...CCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp TCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: SCTPRLHGGWTVLLLHFLLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...AAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR TCA 90 bp GGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCGAAACTGTTTGTCACTaGCCTTCTGGGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GAPAPLPFSRQVLTEAGAETVCH*PSGVPR
Trigger: CCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTC...GGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR TCA 90 bp CTGCAATCTCGGCACTTTGGGAGGCTAAGGCAGGCAGCTGGGAGGTGGAGGTTGGCAAAACAAGTGACATaGAGGGAGGGTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LQSRHFGRLRQAAGRWRLAKQVT*REGPCV
Trigger: CACACAGGGACCCTCCCTTCATGTCACTTGTTTTGC...CAACCTCCACCTCCCAGCTGCCTGCCTTAGCCTCCCAAAGTGCCGAGATTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp AAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCCAGGGTGCTCCACGCAGAATaGGACGATGGCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: KSNVKAAIEWVPAALPPRVLHAE*DDGPDP
Trigger: TGGGTCAGGGCCATCGTCTCATTCTGCGTGGAGCAC...CCTGGGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTTCCTGGGTGCCATCCCCCGCCGTTGTaGCCACTTTTGCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: SDMKGGSLCVCVLMFPGCHPPPL*PLLPTS
Trigger: AGAGGTGGGCAAAAGTGGTCACAACGGCGGGGGATG...GCACCCAGGAAACATCAGCACACACACACACAGGGACCCTCCCTTCATGTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp CTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGTCCACTGTGGCCTGTaGGGACGAGAGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLHIPSLLVSHVFFFTGTVHCGL*GRELWA
Trigger: TGCCCAGAGCTCTCGTCCTCACAGGCCACAGTGGAC...AGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: PCRGYVSSPAHSLPNGFHGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...GTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp TCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SVRASFSAFFQDQGLGCKPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...CTTGCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: RASAMLVSLRAASWSLHHPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...GTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RASAMLVSLRAASWSLHHPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...GTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PCRGYVSSPAHSLPNGFHSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...GTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACAGGGGCCCACCCTCTaGCCAGGGAGTCCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPQGPTL*PGSPCV
Trigger: GACGCAAGGACTCCCTGGGCAGAGGGTGGGCCCCTG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCAGGGGCCCACCCTCTaGCCAGGGAGTCCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQQGPTL*PGSPCV
Trigger: GACGCAAGGACTCCCTGGGCAGAGGGTGGGCCCCTG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGAGGACCGCCTGCCCTaGCTGGGCCTTGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CELFLGGRTNCAHLEDVAEDRLP*LGLGWA
Trigger: GGCCCAGCCAAGGCCCAGGCAGGGCAGGCGGTCCTC...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CAGTGTGAAAAAGACTGCTTGGCCCTTTACAGGGAAAGCAGGTCCACTGTGGCCCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: QCEKDCLALYRESRSTVARHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...GGCCACAGTGGACCTGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RGPGSSILDEGCLLKHTPKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...AGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GCTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: AASHSQPAGVPRFLLHWHKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...GTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTCAGCAGGGCTGGGCCTaGGAGACCCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PACWCPTFSSSLALTVSSQQGWA*ETQGSL
Trigger: CAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTGCTG...AGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTCAACTGCAGTGCCCTTaGTGTGCCCTGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLQLQCP*CALAPL
Trigger: CAGAGGAGCCAGGGCACAGCAAGGGCACTGCAGTTG...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTGACTCCCAACTGCAGTaGCCTTGCTGTGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AWGPSEETLAAHCPHVNFDSQLQ*PCCALA
Trigger: AGCCAGGGCACAGCAAGGGCACTGCAGTTGGGAGTC...AAAGTTCACATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTGATAGAGTGGGTCCCTaGAGCACTGCCACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLDRVGP*STATQA
Trigger: TGCCTGGGTGGCAGTGCTGCAGGGACCCACTCTATC...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTCCTTCCCAAGCGCGTGCGCTCTaGATTTGTCCCGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: GSSILDEGCLLKHTPVPSQARAL*ICPAAA
Trigger: GGCCGCGGCGGGACAAATGCAGAGCGCACGCGCTTG...GGAAGGAACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCAGGCAGCCAAGCGCGTaGGCTCTGCATTTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: PSLLVSHVFFFTGTDSFFRQPSA*ALHLSR
Trigger: GCGGGACAAATGCAGAGCGCACGCGCTTGGCTGCCT...GAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp ACTCGGCAGGCTGAGGCAAGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATTTTGCCCACCTCTTCTaGGTGCCCCTCTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TRQAEARESGREVAVSRDFAHLF*VPLFCL
Trigger: GAGACAGAAGAGGGGCACGCAGAAGAGGTGGGCAAA...ATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCTTGCCTCAGCCTGCCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp TGGGCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATGGGCGGCCAGGCAGCAGCTCCGTCCAAGTTaGTGCAAAAGGTATTATTTC +
Preference number: 4 (lower is better)
Translates to: WAARQRGSSHSRRWAARQQLRPS*CKRYYF
Trigger: GAAATAATACCTTTTGCAGCAACTTGGACGGAGCTG...CTGCCTGGCCGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp TCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: SCTPRLHGGWTVLLLHFLSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...AAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ASWSLHHCSSLISKPSAARLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTGGCCCGAGGAAGCTaGACAGCGGCAGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPVARGS*TAAVGL
Trigger: CAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCAC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp ACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTGGACTGGAAGCTTGGTCACATAGTCGTGTaGGTCGAGGATTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TLHSAALDMRWGLLDWKLGHIVV*VEDSVP
Trigger: AGGCACAGAATCCTCGACCCACACGACTATGTGACC...AAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp ACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: TPPCRGYVSSPAHSLPNGLRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...GCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp AGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTTTCTGCTACAGACCTaGTACACTCTGATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SHPSPARHGCTEAGRCSCFLLQT*YTLILD
Trigger: ATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAA...GCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCGCACTGGATATGCGGTaGGGCCTGCTGGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSALDMR*GLLDWK
Trigger: CTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGC...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTGCACTCTGCAGCACTaGATATGCGGTGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KTRNPGGKMGFLRVGIAHCTLQH*ICGGAC
Trigger: GCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCA...GTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACGTGACTGACGCCCAGTaGACTCCCAACTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KTRNPGGKMGFLRVGIAHVTDAQ*TPNCSA
Trigger: GGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCAC...GTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTTTGAATTCTGCTTCTTaGCATGAGCCAGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLLNSAS*HEPVLC
Trigger: ACAGAGCACTGGCTCATGCCAAGAAGCAGAATTCAA...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGCCAGGGACTGGCCCGTaGCAGACTCTCTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSPGTGP*QTLWSF
Trigger: GAATGACCAGAGAGTCTGCCACGGGCCAGTCCCTGG...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCCAGGAGCTCCGTGTCTaGGGAACTCTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: AARRLDGAPAPLPFSRQVQELRV*GTLQKG
Trigger: TCCTTTTTGCAGAGTTCCCCAGACACGGAGCTCCTG...GACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000639215.1
ENST00000639837.1
CDS-3UTR CCA 90 bp GGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCCCTGCATCCGAGTCAGCCTaGGCCAACCAGGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GVYNQHQSLHHKPGKPAPASESA*ANQVAS
Trigger: AGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGC...AGGGGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp ATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCGGCAGGCTCGGACACTaGCAGACCCTGGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: IPSLLVSHVFFFTGTDSFGRLGH*QTLVLA
Trigger: AGCCAGGACCAGGGTCTGCCAGTGTCCGAGCCTGCC...GAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CAA 72 bp TGCAGTGAGCCGAGATGGCAGCAGTACAGTCCAGCTTaGGCTCGGCATCAGAGGGAGACCGTGGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: CSEPRWQQYSPA*ARHQRETVEKE
Trigger: CTCTTTCTCCACGGTCTCCCTCTGATGCCGAGCCAAAGCTGGACTGTACTGCTGCCATCTCGGCTCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp TCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACAGCACCCGAGAACGCTaGAGCGACGCCATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SHTRSVVTGTREKLFVTDSTRER*SDAIPA
Trigger: AGCAGGGATGGCGTCGCTTCAGCGTTCTCGGGTGCT...GTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR TCA 90 bp CTGGCGGATCACTCGTGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAACTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: LADHSWLGAGDQPGQHSELLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...TTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCACGAGTGATCCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp AGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RASAMLVSLRAASWSLHHQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...GTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACGGCAGTGGGCCTGCTaGGGCCTTCTCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPRQWAC*GLLLRP
Trigger: AGGCCTCAAGAGAAGGCCTCAGCAGGCCCACTGCCG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCGGCAGTGGGCCTGCTaGGGCCTTCTCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQRQWAC*GLLLRP
Trigger: AGGCCTCAAGAGAAGGCCTCAGCAGGCCCACTGCCG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTTCTCAGACCCAGATGTaGCGGGGTGTGTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GPGSSILDEGCLLKHTPVSQTQM*RGVWPE
Trigger: CTCGGGCCACACACCCCGTCACATCTGGGTCTGAGA...AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR TCA 90 bp TTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: FLLGLRRLTKGIRNVGFTASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...AGTGAAACCAACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp AATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTGCTTCCTGCTGGGACTaGGAAGGCTCACGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: NCRSLYGPVSLPSSRIRGASCWD*EGSRRA
Trigger: TGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGC...ACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCTGTGTGTGTGTGTGCTaGTGTTTCCTGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VSVRASFSAFFQDQGLGCCVCVC*CFLGAL
Trigger: CAGGGCACCCAGGAAACATCAGCACACACACACACA...GCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp CTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTGCAAAACAAGTGACATaGAGGGAGGGTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LHGGWTVLLLHFLFLGRSAKQVT*REGPCV
Trigger: CACACAGGGACCCTCCCTTCATGTCACTTGTTTTGC...AGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp GCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTGACCCATCGTCAGGTTaGCCTGCTGGCCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: ASDRKDKKPGWEDGLSAGDPSSG*PAGQPQ
Trigger: CTGAGGTTGGCCAGCAGGTCAACCTGACGATGGGTC...ACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCATGAGACGATGGCCCTaGCCCATCGTCAGGTTGACC +
Preference number: 4 (lower is better)
Translates to: REKQCESSDRVGPCSTATMRRWP*PIVRLT
Trigger: GGTCAACCTGACGATGGGTCAGGGCCATCGTCTCAT...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGGGTGGGGGCAGTGACTaGCGCCCAGTGGACTCCCAA +
Preference number: 4 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSGGGSD*RPVDSQ
Trigger: TTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACC...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTGAGGCTCTGCGGCCCTaGAACTTGACGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLEALRP*NLTLAL
Trigger: CAAAGCCAACGTCAAGTTTCAGGGCCGCAGAGCCTC...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTGGCAGGCAGATTGCTTaGGCCCAGGAGTTTGACACC +
Preference number: 4 (lower is better)
Translates to: AWGPSEETLAAHCPHVNFGRQIA*AQEFDT
Trigger: GGTGTCAAACTCCTGGGCTCAAGCAATCTGCCTGCC...AAAGTTCACATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACGGCAGGCAGATTGCTTaGGCCCAGGAGTTTGACACC +
Preference number: 4 (lower is better)
Translates to: KTRNPGGKMGFLRVGIAHGRQIA*AQEFDT
Trigger: GGTGTCAAACTCCTGGGCTCAAGCAATCTGCCTGCC...GTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGGAAGAGGCGGCAGCTaGAGCAGCGTAGCACCCGAG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQGRGGS*SSVAPE
Trigger: CTCGGGTGCTACGCTGCTGCAGCTGCCGCCTCTTCC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGAAGAGGCGGCAGCTaGAGCAGCGTAGCACCCGAG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPGRGGS*SSVAPE
Trigger: CTCGGGTGCTACGCTGCTGCAGCTGCCGCCTCTTCC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp ACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTGGACTGGAAGCTTTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TLHSAALDMRWGLLDWKLFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...AAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp ACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TPPCRGYVSSPAHSLPNGCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...GCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
CDS-3UTR GCA 90 bp CGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RGPGSSILDEGCLLKHTPTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...AGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GIRNVGFTESCLLVSSPLGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...CAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR GCA 90 bp CAGTGTGAAAAAGACTGCTTGGCCCTTTACAGGGAAAGCAGGTCCACTGTGGCCCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: QCEKDCLALYRESRSTVAPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...GGCCACAGTGGACCTGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTTCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGPGSSILDEGCLLKHTPSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...AGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR GCA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGGTGGCAGGACAAATTaGGCCCATTTAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQGGRTN*AHLEDV
Trigger: CACATCCTCTAAATGGGCGCAATTTGTCCTGCCACC...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR GCA 90 bp GGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTCCCTTGCTTAGCCTGTaGTGGACCAGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPGSSILDEGCLLKHTPVPLLSL*WTSWPG
Trigger: CCCAGGCCAGCTGGTCCAGCACAGGCTAAGCAAGGG...AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCAGGGGCCCACCCTCTaGCCAGGGAGTCCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQQGPTL*PGSPCV
Trigger: GACGCAAGGACTCCCTGGGCAGAGGGTGGGCCCCTG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGGTCGAGGATTCTGTaGCTCCAGGACCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPGSRIL*LQDQGP
Trigger: GGGCCCCTGGTCCTGGAGGCACAGAATCCTCGACCC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGGGTCGAGGATTCTGTaGCTCCAGGACCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQGSRIL*LQDQGP
Trigger: GGGCCCCTGGTCCTGGAGGCACAGAATCCTCGACCC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp TTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: FPACWCPTFSSSLALTVSRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...AGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCTCCTCCATTTTAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LPFSRQVLTEAGAWLLHFKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...AAAATGGAGGAGCCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: DMASTISTRAFTISLVSQKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...CTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR GCA 90 bp CAGTGTGAAAAAGACTGCTTGGCCCTTTACAGGGAAAGCAGGTCCACTGTGGCCAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QCEKDCLALYRESRSTVAKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...GGCCACAGTGGACCTGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCACTCCTGACCCCTCCCTaGAGGGGCTACGTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRIAGLCTGQFLCLLPGSLLTPP*RGYVSS
Trigger: GCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG...TGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AGTGACATGAAGGGAGGGTCCCTGTGTGTGTGTGTGCTGATGTTTCCTGGGTGCCTGATGTTTCCTGGGTaGCCTGGCTCCTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SDMKGGSLCVCVLMFPGCLMFPG*PGSLQQ
Trigger: CTGCTGCAAGGAGCCAGGGCACCCAGGAAACATCAG...GCACCCAGGAAACATCAGCACACACACACACAGGGACCCTCCCTTCATGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTACAGTTGGGTTGTGCTaGTTACAAAGGGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: VCGPRKLDSGSGPAEAFSTVGLC*LQREKQ
Trigger: TTGCTTTTCCCTTTGTAAGCAGCACAACCCAACTGT...AGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp TCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLRAASWSLHHCSSLISKRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...TTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640658.1
CDS-3UTR CCA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTCTGGACCAGCTGGCCTaGGGTCCCTCTGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTLDQLA*GPSEET
Trigger: GGTCTCTTCAGAGGGACCCCAGGCCAGCTGGTCCAG...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGTGGCCCGAGGAAGCTaGACAGCGGCAGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQVARGS*TAAVGL
Trigger: CAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCAC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp ACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCACACACACGCTCAGTaGTCACTGGGACCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: TGTREKLFVTDLLGSPGDHTHAQ*SLGPER
Trigger: TCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTG...GTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp GACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGCACACACACGCTCAGTaGTCACTGGGACCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: DGAPAPLPFSRQVLTEAGHTHAQ*SLGPER
Trigger: TCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTG...CCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp AGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCGTTTCCTGGGTGCCCTaGCTCCTTGCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGYVSSPAHSLPNGFHFLVSWVP*LLAAGL
Trigger: CAGCCCTGCTGCAAGGAGCCAGGGCACCCAGGAAAC...GAGAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCTGTGCTGATGTTTCCTaGGTGCCCTGGCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: VSVRASFSAFFQDQGLGCCADVS*VPWLLA
Trigger: TGCAAGGAGCCAGGGCACCCAGGAAACATCAGCACA...GCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGGGGCAAATGCGAGTGTaGAGGGAAGCATCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSGQMRV*REASPR
Trigger: CCTGGGAGATGCTTCCCTCCACACTCGCATTTGCCC...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGAGCGGAGACCGACCTTaGCTGATGTGGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQSGDRP*LMWGWG
Trigger: CCCCCACCCCCACATCAGCCAAGGTCGGTCTCCGCT...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTTTGAATTCTGCTTCTTaGCATGAGCCAGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SPALQSAEFSWRQGLLPCLNSAS*HEPVLC
Trigger: ACAGAGCACTGGCTCATGCCAAGAAGCAGAATTCAA...ACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTAAAATTAACCTGGCGTaGTGGCACGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LLRPSLEACALGVPCLACKINLA*WHAPVI
Trigger: GATTACAGGCGCGTGCCACCACGCCAGGTTAATTTT...ACAGGCTAAGCAAGGGACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCACTGGTGCTGGGGTCTaGCTTCTCTCACCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: REKQCESSDRVGPCSTATTGAGV*LLSPQE
Trigger: TTCCTGGGGTGAGAGAAGCCAGACCCCAGCACCAGT...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCAGCACCACTCCTCATaGCTTCCTTACTGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWQHHSS*LPYCFG
Trigger: GCCGAAACAGTAAGGAAGCCATGAGGAGTGGTGCTG...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTGACCCTGGTCCTGGCTaGCCAAGGCAGCAGGGTATG +
Preference number: 4 (lower is better)
Translates to: PVLGSPFLDTSASDSLRADPGPG*PRQQGM
Trigger: CATACCCTGCTGCCTTGGCCAGCCAGGACCAGGGTC...AGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAAGCACCCGAGAACGCTaGAGCGACGCCATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPSTRER*SDAIPA
Trigger: AGCAGGGATGGCGTCGCTTCAGCGTTCTCGGGTGCT...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGAGCACCCGAGAACGCTaGAGCGACGCCATCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQSTRER*SDAIPA
Trigger: AGCAGGGATGGCGTCGCTTCAGCGTTCTCGGGTGCT...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GCAGAGGCTGCAATCTCGGCACTTTGGGAGGCTAAGGCAGGCAGCTGGGAGGTGTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: AEAAISALWEAKAGSWEVFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...CACCTCCCAGCTGCCTGCCTTAGCCTCCCAAAGTGCCGAGATTGCAGCCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp CTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCTCCTCCATTTTCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPFSRQVLTEAGAWLLHFQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...AAAATGGAGGAGCCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR TCA 90 bp CTGCTGAGGCCTTCTCTTGAGGCCTGTGCTCTGGGGGTCCCTTGCTTAGCCTGTCTCACTGTCCACATGTaGACTTTTTCTAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLRPSLEACALGVPCLACLTVHM*TFSRWQ
Trigger: CTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAG...ACAGGCTAAGCAAGGGACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR TCA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGCTCACTGTCCACATGTaGACTTTTTCTAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQLTVHM*TFSRWQ
Trigger: CTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAG...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGCCTGGGGTCCCTCTaGAGAGACCTTGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPGLGSL*RDLGCS
Trigger: TGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGCC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGGCCTGGGGTCCCTCTaGAGAGACCTTGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQGLGSL*RDLGCS
Trigger: TGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGCC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCTGAGGCCTTCTCTTaGGGCCTGTGCTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPAEAFS*GLCSGG
Trigger: ACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCGGCAGTGGGCCTGCTaGGGCCTTCTCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQRQWAC*GLLLRP
Trigger: AGGCCTCAAGAGAAGGCCTCAGCAGGCCCACTGCCG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGGTTGTGCTGCTTACAAAGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCGGCAGTGGGCCTGCTaGGGCCTTCTCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLCCLQREKQCESSDRVGRQWAC*GLLLRP
Trigger: AGGCCTCAAGAGAAGGCCTCAGCAGGCCCACTGCCG...ACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCTTTGTAAGCAGCACAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTCTCAGACCCAGATGTaGCGGGGTGTGTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQSQTQM*RGVWPE
Trigger: CTCGGGCCACACACCCCGTCACATCTGGGTCTGAGA...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATCTCAGACCCAGATGTaGCGGGGTGTGTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPSQTQM*RGVWPE
Trigger: CTCGGGCCACACACCCCGTCACATCTGGGTCTGAGA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp CAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGGCAAAACAAGTGACATaGAGGGAGGGTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QVSVRASFSAFFQDQGLGAKQVT*REGPCV
Trigger: CACACAGGGACCCTCCCTTCATGTCACTTGTTTTGC...CCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTTCAGGGCGGCCCGCTaGCGACTCCTGCCCGGACAA +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITFRAAR*RLLPGQ
Trigger: TTGTCCGGGCAGGAGTCGTCAGCGGGCCGCCCTGAA...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCGGCTTCAGTAGGCTATaGCTGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSGFSRL*LCHCTP
Trigger: TGGAGTGCAGTGGCACAGTCATAGCCTACTGAAGCC...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGGTGCCCTGGCTCCTCTaGCAGGCAGAGCAAACCCTG +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLVPWLL*QAEQTL
Trigger: CAGGGTTTGCTCTGCCTGTCAGAGGAGCCAGGGCAC...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCAGGCAGAGGTTGCAGTaGGCCGAAATCACGCCATTC +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSRQRLQ*AEITPF
Trigger: GAATGGCGTGATTTCGGCTCACTGCAACCTCTGCCT...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCAGCCCCTCTCTTCTaGGACCCAATCCCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: DMASTISTRAFTISLVSQPAPLF*DPIPVD
Trigger: GTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGG...CTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR GCA 90 bp CAGAGGTGGGCATCCGAGTCAGCCTGGGCCAACCAGGTTGCTTCTCCTAGGAATTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: QRWASESAWANQVASPRNFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...ATTCCTAGGAGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGCCCACCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
CDS-3UTR GCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VVGFLLGLRRLTKGIRNVGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...AACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGCCCACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QVSVRASFSAFFQDQGLGRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...CCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp TTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: FLLGLRRLTKGIRNVGFTGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...AGTGAAACCAACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: RGYVSSPAHSLPNGFHFLPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...GAGAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GPGSSILDEGCLLKHTPVPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCCCTTGCTTAGCCTGTaGTGGACCAGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQPLLSL*WTSWPG
Trigger: CCCAGGCCAGCTGGTCCAGCACAGGCTAAGCAAGGG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACCCTTGCTTAGCCTGTaGTGGACCAGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPPLLSL*WTSWPG
Trigger: CCCAGGCCAGCTGGTCCAGCACAGGCTAAGCAAGGG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGCCCTTGCTTAGCCTGTaGTGGACCAGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSPLLSL*WTSWPG
Trigger: CCCAGGCCAGCTGGTCCAGCACAGGCTAAGCAAGGG...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCAGGGGCCCACCCTCTaGCCAGGGAGTCCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITQGPTL*PGSPCV
Trigger: GACGCAAGGACTCCCTGGGCAGAGGGTGGGCCCCTG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGGGTCGAGGATTCTGTaGCTCCAGGACCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQGSRIL*LQDQGP
Trigger: GGGCCCCTGGTCCTGGAGGCACAGAATCCTCGACCC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523084.5
ENST00000639933.1
CDS-3UTR GCA 90 bp GGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GPGSSILDEGCLLKHTPVKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp TCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACAGCAGGGCTGGGCCTaGGAGACCCAAGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SLRAASWSLHHCSSLISKQQGWA*ETQGSL
Trigger: CAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTGCTG...TTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTCCTGGAAGGGCTCGCTaGAGGCCTGCGCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSPGRAR*RPAPHL
Trigger: CAAGTGGGGCGCAGGCCTGCAGCGAGCCCTTCCAGG...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp ACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTATCCCAGCTGTGGCATaGTGGGACTCCCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TFPACWCPTFSSSLALTVIPAVA*WDSLEG
Trigger: CCCTTCCAGGGAGTCCCAGCATGCCACAGCTGGGAT...AACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTATATGCGGTGGGGCCTaGTGGACTGGAAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLICGGA*WTGSFK
Trigger: CTTGAAGCTTCCAGTCCAGCAGGCCCCACCGCATAT...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTCTGCAGCACTGGATATaGGGTGGGGCCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTLQHWI*GGACWT
Trigger: AGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAG...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGGCAGTGCCCTTGCTGTaGCCTGGCTCCTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLAVPLL*PGSSDR
Trigger: CCTGTCAGAGGAGCCAGGGCACAGCAAGGGCACTGC...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGGCCTGTGATCCCAGCTaGTCGGGAGGATCACTTAAG +
Preference number: 4 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSACDPS*SGGSLK
Trigger: CTTAAGTGATCCTCCCGAGCAGCTGGGATCACAGGC...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAAGAGCCTGCCGGGTTCTaGAGCTGCAGAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: EAVRLGQALILRVSKTKQEPAGF*SCRGGS
Trigger: GCTGCCACCTCTGCAGCTGCAGAACCCGGCAGGCTC...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: SEPPESCTPRLHGGWTVLSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...GAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
CDS-3UTR CCA 90 bp ACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCAAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: TRVLHATAARRLDGAPAPSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...TGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGGTGGCTGTAACCTGCTaGATGGGACTCCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: GFRQKRQETRVGRWAFCGVAVTC*MGLHSS
Trigger: GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCAC...CCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACTGGACCAGCTGGCCTaGGGTCCCTCTGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPLDQLA*GPSEET
Trigger: GGTCTCTTCAGAGGGACCCCAGGCCAGCTGGTCCAG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCTGGACCAGCTGGCCTaGGGTCCCTCTGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQLDQLA*GPSEET
Trigger: GGTCTCTTCAGAGGGACCCCAGGCCAGCTGGTCCAG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACTGTGCTGGACCAGCTaGCCTGGGGTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPLCWTS*PGVPLK
Trigger: CTTCAGAGGGACCCCAGGCCAGCTGGTCCAGCACAG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCTGTGCTGGACCAGCTaGCCTGGGGTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQLCWTS*PGVPLK
Trigger: CTTCAGAGGGACCCCAGGCCAGCTGGTCCAGCACAG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGTGGCCCGAGGAAGCTaGACAGCGGCAGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITVARGS*TAAVGL
Trigger: CAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCAC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTGACAAGAAACCCGGGTaGGAAGATGGGCTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: AWGPSEETLAAHCPHVNFDKKPG*EDGLSA
Trigger: CGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC...AAAGTTCACATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: LPAGATLAAQHIACLMAFLRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...GAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp AGAGTGCCTCACATACAAGAGTCCACAGCAGGGCAAATGCGAGTGTGGAGGGAAGGGCAAATGCGAGTGTaGAGGGAAGCATCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVPHIQESTAGQMRVWREGQMRV*REASPR
Trigger: CCTGGGAGATGCTTCCCTCCACACTCGCATTTGCCC...TTCCCTCCACACTCGCATTTGCCCTGCTGTGGACTCTTGTATGTGAGGCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCCAGTGCTCTGTGCGTaGTGCAAGGCCAGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQPVLCA*CKASGD
Trigger: GTCTCCGCTGGCCTTGCACCACGCACAGAGCACTGG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTCTCTTCTGAGACCCAATCCCAGTTGACTGGACCAGAGGTGGGCATCCGAGTCCAGGAGCTCCGTGTCTaGGGAACTCTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LSSETQSQLTGPEVGIRVQELRV*GTLQKG
Trigger: TCCTTTTTGCAGAGTTCCCCAGACACGGAGCTCCTG...GACTCGGATGCCCACCTCTGGTCCAGTCAACTGGGATTGGGTCTCAGAAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR CCA 90 bp TACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCCCTCTCTTCGCATCCGAGTCAGCCTaGGCCAACCAGGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: YNQHQSLHHKPGKPAPLFASESA*ANQVAS
Trigger: AGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGC...GAAGAGAGGGGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp CTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCCACCACCTGGCTGCCTaGTGTCGCAGTGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LILDKVSLGVVSRQAGEAHHLAA*CRSGRV
Trigger: AACTCTGCCACTGCGACACCAGGCAGCCAGGTGGTG...GGCCTCCCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp AATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTGCTTACACACCACCTaGCTGCCTGGTGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: NCRSLYGPVSLPSSRIRGCLHTT*LPGVAV
Trigger: CACTGCGACACCAGGCAGCCAGGTGGTGTGTAAGCA...ACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCGCAATCTCGGCACTTTaGGAGGCTAAGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLLVSHVFFFTGTDSFFAISAL*EAKAGS
Trigger: GCTGCCTGCCTTAGCCTCCCAAAGTGCCGAGATTGC...GAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CAA 72 bp CACACCACCTGGCTGCCTGGTGTCGCAGTGGCAGAGTaGAGCAGTGTGAAAAAGACTGCTTGGCCCTTTACA +
Preference number: 4 (lower is better)
Translates to: HTTWLPGVAVAE*SSVKKTAWPFT
Trigger: TGTAAAGGGCCAAGCAGTCTTTTTCACACTGCTCAACTCTGCCACTGCGACACCAGGCAGCCAGGTGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp TTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FPACWCPTFSSSLALTVSQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...AGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000524068.5
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR TCA 90 bp GGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCCTCACTGTCCACATGTaGACTTTTTCTAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GAPAPLPFSRQVLTEAGALTVHM*TFSRWQ
Trigger: CTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAG...GGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR TCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGGCCTGGGGTCCCTCTaGAGAGACCTTGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQGLGSL*RDLGCS
Trigger: TGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGCC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGCTGAGGCCTTCTCTTaGGGCCTGTGCTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQAEAFS*GLCSGG
Trigger: ACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCGGCAGTGGGCCTGCTaGGGCCTTCTCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITRQWAC*GLLLRP
Trigger: AGGCCTCAAGAGAAGGCCTCAGCAGGCCCACTGCCG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTCGGCAGTGGGCCTGCTaGGGCCTTCTCTTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: CELFLGGRTNCAHLEDVARQWAC*GLLLRP
Trigger: AGGCCTCAAGAGAAGGCCTCAGCAGGCCCACTGCCG...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR TCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCTCAGACCCAGATGTaGCGGGGTGTGTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQSQTQM*RGVWPE
Trigger: CTCGGGCCACACACCCCGTCACATCTGGGTCTGAGA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAAGTCCTTGCGTCCCATaGGGTCTTCCCGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPSPCVP*GLPARP
Trigger: AGGCCTTGCGGGAAGACCTCATGGGACGCAAGGACT...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGAGTCCTTGCGTCCCATaGGGTCTTCCCGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQSPCVP*GLPARP
Trigger: AGGCCTTGCGGGAAGACCTCATGGGACGCAAGGACT...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGTCTCATGTCATCAGGTaGTCCATCTCCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSSHVIR*SISWGP
Trigger: AGGTCCCCAGGAGATGGATCACCTGATGACATGAGA...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGAGGCCAGCCTGTCCCTaGAAGAGAAGATGGCCATGC +
Preference number: 4 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQRPACP*KRRWPC
Trigger: GCATGGCCATCTTCTCTTTCAGGGACAGGCTGGCCT...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACCGTTGGCTTTGCCACTaGACTTGCCATGACTGCACA +
Preference number: 4 (lower is better)
Translates to: KTRNPGGKMGFLRVGIAHRWLCH*TCHDCT
Trigger: TGTGCAGTCATGGCAAGTTCAGTGGCAAAGCCAACG...GTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACACCAGCCCCTCTCTTCTaGGACCCAATCCCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: FTFPACWCPTFSSSLALTPAPLF*DPIPVD
Trigger: GTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGG...TGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000640706.1
CDS-3UTR TCA 90 bp TTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTCCAGCCCCTCTCTTCTaGGACCCAATCCCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: FPACWCPTFSSSLALTVSPAPLF*DPIPVD
Trigger: GTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGG...AGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000640706.1
CDS-3UTR TCA 90 bp AATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTGCAGACCAAGAACTATaGCATCGGAGCGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: NCRSLYGPVSLPSSRIRGADQEL*HRSGSG
Trigger: TCCAGAGCCGCTCCGATGTCATAGTTCTTGGTCTGC...ACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp AATTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCAGGAAGAGGCGGCAGCTaGAGCAGCGTAGCACCCGAG +
Preference number: 4 (lower is better)
Translates to: NYHTHAQWSLGPERNCLSGRGGS*SSVAPE
Trigger: CTCGGGTGCTACGCTGCTGCAGCTGCCGCCTCTTCC...TGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: DGAPAPLPFSRQVLTEAGFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...CCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLCTGQFLCLLPGSGVRVCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...CACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AWGPSEETLAAHCPHVNFGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...AAAGTTCACATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AWGPSEETLAAHCPHVNFRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...AAAGTTCACATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GPGSSILDEGCLLKHTPVTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR GCA 90 bp GCTCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: APVLGSPFLDTSASDSLRTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000640942.1
CDS-3UTR GCA 90 bp TTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FTFPACWCPTFSSSLALTTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...TGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ASWSLHHCSSLISKPSAAPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCTCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LILDKVSLGVVSRQAGEASAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...GGCCTCCCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCCCTTGCTTAGCCTGTaGTGGACCAGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQPLLSL*WTSWPG
Trigger: CCCAGGCCAGCTGGTCCAGCACAGGCTAAGCAAGGG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGCTCTGGGGGTCCCTTaGTTAGCCTGTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQALGVP*LACAGP
Trigger: TGGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGGGTCGAGGATTCTGTaGCTCCAGGACCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITGSRIL*LQDQGP
Trigger: GGGCCCCTGGTCCTGGAGGCACAGAATCCTCGACCC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGGGTTCTGACACTTTCTaGTGGAAGCTGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSGSDTF*WKLSGW
Trigger: CCAGCCTGACAGCTTCCAGCAGAAAGTGTCAGAACC...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: WCPTFSSSLALTVSSRDLRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...CAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000522663.5
ENST00000639381.1
ENST00000639837.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523084.5
ENST00000639933.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523084.5
ENST00000639933.1
CDS-3UTR GCA 90 bp TCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAAAGACCCAAGGCTCACTaGAGCGCGCTCCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: SLRAASWSLHHCSSLISKRPKAH*SALLTP
Trigger: AGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCT...TTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCAACTGCAGTGCCCTTaGTGTGCCCTGGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLQLQCP*CALAPL
Trigger: CAGAGGAGCCAGGGCACAGCAAGGGCACTGCAGTTG...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGAGTGAGCCAAGATCGTaGCATTACACTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GFRQKRQETRVGRWAFCGSEPRS*HYTPAR
Trigger: CCTGGCTGGAGTGTAATGGCACGATCTTGGCTCACT...CCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGCCGGGTTCTGCAGCTaGAGAGGTGGCAGCACCGAG +
Preference number: 4 (lower is better)
Translates to: CELFLGGRTNCAHLEDVAAGFCS*RGGSTE
Trigger: CTCGGTGCTGCCACCTCTGCAGCTGCAGAACCCGGC...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGGTTGTGCTGCTTACAAAGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCAGCTCTCCAGAGCCTaGCGGGTTCTGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLCCLQREKQCESSDRVGQLSRA*RVLQLQ
Trigger: CTGCAGCTGCAGAACCCGGCAGGCTCTGGAGAGCTG...ACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCTTTGTAAGCAGCACAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCTCCTCGTGTCTGGGGAACTCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: APLPFSRQVLTEAGAWLLVSGEL*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGAGTTCCCCAGACAC...GAGGAGCCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000639215.1
ENST00000639837.1
CDS-3UTR GCA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGAGCCTTTCCAGATTCTaGTCCATCCATTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQSLSRF*SIHFTS
Trigger: GGAAGTGAAATGGATGGAGCAGAATCTGGAAAGGCT...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp AATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTTTGCCCACCTCTTCTaGGTGCCCCTCTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: NCRSLYGPVSLPSSRIRGFAHLF*VPLFCL
Trigger: GAGACAGAAGAGGGGCACGCAGAAGAGGTGGGCAAA...ACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCCTGGAGGCAGGGGCTaGTGCCTGTTTCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQPGGRG*CLFHLP
Trigger: TGGAAGGTGAAACAGGCAGCAGCCCCTGCCTCCAGG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610475.4
ENST00000638399.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACCTGGAGGCAGGGGCTaGTGCCTGTTTCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPPGGRG*CLFHLP
Trigger: TGGAAGGTGAAACAGGCAGCAGCCCCTGCCTCCAGG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610475.4
ENST00000638399.1
CDS-3UTR CCA 90 bp TGGGCAGCCAGGCAGAGGGGCTCCTCACATTCCAGACGATGGGCGGCCAGGCAGAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: WAARQRGSSHSRRWAARQSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...CTGCCTGGCCGCCCATCGTCTGGAATGTGAGGAGCCCCTCTGCCTGGCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp ACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: TPPCRGYVSSPAHSLPNGSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACACGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000519208.5
ENST00000639865.1
ENST00000640320.1
CDS-3UTR CCA 90 bp TTCGTCAACTGTGACAAAAGACAGAATTATCACACACACGCTCAGTGGTCACTGCGGCTGCACGGAGGCTaGACGGTGCTCCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: FVNCDKRQNYHTHAQWSLRLHGG*TVLLLH
Trigger: GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCG...CAGTGACCACTGAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR CCA 90 bp TACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGCCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: YTLILDKVSLGVVSRQAGPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...CCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCCAGCCTGTCCCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITPACPF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGGACAGGCTGG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGCCTCTGAAGAGACCTTaGCTGCTCACTGTCCACATG +
Preference number: 4 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSPLKRP*LLTVHM
Trigger: CATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGG...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCTGGACCAGCTGGCCTaGGGTCCCTCTGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQLDQLA*GPSEET
Trigger: GGTCTCTTCAGAGGGACCCCAGGCCAGCTGGTCCAG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCTGTGCTGGACCAGCTaGCCTGGGGTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQLCWTS*PGVPLK
Trigger: CTTCAGAGGGACCCCAGGCCAGCTGGTCCAGCACAG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp CTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCCTGTGCTGGACCAGCTaGCCTGGGGTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LFLGGRTNCAHLEDVAVTLCWTS*PGVPLK
Trigger: CTTCAGAGGGACCCCAGGCCAGCTGGTCCAGCACAG...GGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CCA 90 bp AGATTCAAAGCCACTTACTTACCCAGGATCACAAAACTAGTTGGCGGCAACATCGTGGCCCGAGGAAGCTaGACAGCGGCAGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RFKATYLPRITKLVGGNIVARGS*TAAVGL
Trigger: CAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCAC...GATGTTGCCGCCAACTAGTTTTGTGATCCTGGGTAAGTAAGTGGCTTTGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACGGTCACATAGTCGTGTaGGTCGAGGATTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: KTRNPGGKMGFLRVGIAHGHIVV*VEDSVP
Trigger: AGGCACAGAATCCTCGACCCACACGACTATGTGACC...GTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTCTGACACTTTCTGCTaGAAGCTGTCAGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KTRNPGGKMGFLRVGIAHSDTFC*KLSGWD
Trigger: GTCCCAGCCTGACAGCTTCCAGCAGAAAGTGTCAGA...GTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAACGCTCAGTGGTCACTaGGACCAGAGAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: GPERNCLSLTFWGPQATSTLSGH*DQRETV
Trigger: AACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGT...TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp AGAGTGCCTCACATACAAGAGTCCACAGCAGGGCAAATGCGAGTGTGGAGGGAACACACACACGCTCAGTaGTCACTGGGACCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RVPHIQESTAGQMRVWREHTHAQ*SLGPER
Trigger: TCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTG...TTCCCTCCACACTCGCATTTGCCCTGCTGTGGACTCTTGTATGTGAGGCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAGTTTCCTGGGTGCCCTaGCTCCTTGCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSLALTVSSRDLSGSSEVSWVP*LLAAGL
Trigger: CAGCCCTGCTGCAAGGAGCCAGGGCACCCAGGAAAC...TTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp TCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAAGTTTCCTGGGTGCCCTaGCTCCTTGCAGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLRAASWSLHHCSSLISKVSWVP*LLAAGL
Trigger: CAGCCCTGCTGCAAGGAGCCAGGGCACCCAGGAAAC...TTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp ACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGACATGCTGGGACTCCCTaGAAGGGCTCGCTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TVSSRDLSGSSETCPCSRHAGTP*KGSLQA
Trigger: GGCCTGCAGCGAGCCCTTCCAGGGAGTCCCAGCATG...TCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR CCA 90 bp AAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCCAGGGTCAGGTTGACCTGCTaGCCAACCTCAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KSNVKAAIEWVPAALPPRVRLTC*PTSVSP
Trigger: TGGAGAAACTGAGGTTGGCCAGCAGGTCAACCTGAC...CCTGGGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp ACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTGGACTGGAAGCTTATAGTCCCAGCACTTTaGGAAGTGGGAAGATTGCTT +
Preference number: 4 (lower is better)
Translates to: TLHSAALDMRWGLLDWKLIVPAL*EVGRLL
Trigger: AAGCAATCTTCCCACTTCCCAAAGTGCTGGGACTAT...AAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTGACTGACGCCCAGTaGACTCCCAACTGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPVTDAQ*TPNCSA
Trigger: GGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCAC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCCAGGGACTGGCCCGTaGCAGACTCTCTGGTCATTC +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLPGTGP*QTLWSF
Trigger: GAATGACCAGAGAGTCTGCCACGGGCCAGTCCCTGG...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCATGCAGCCCAGGGACTaGCCCGTGGCAGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: LFLGGRTNCAHLEDVAVTMQPRD*PVADSL
Trigger: CAGAGAGTCTGCCACGGGCCAGTCCCTGGGCTGCAT...GGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGTTCAAGACCAGCCTaGCCAACATGGGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ASDRKDKKPGWEDGLSAGSSRPA*PTWGSP
Trigger: AGGGCTTCCCCATGTTGGCCAGGCTGGTCTTGAACT...ACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTGAAGCGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACCAGGAGCTCCGTGTCTaGGGAACTCTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LKRGPGSSILDEGCLLKHQELRV*GTLQKG
Trigger: TCCTTTTTGCAGAGTTCCCCAGACACGGAGCTCCTG...GTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCGCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000639215.1
ENST00000639837.1
CDS-3UTR CCA 90 bp AGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTGCGCATCCGAGTCAGCCTaGGCCAACCAGGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSWESFSRYFSQRLSEGCASESA*ANQVAS
Trigger: AGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGC...GCAGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524068.5
ENST00000640706.1
CDS-3UTR CCA 90 bp CCCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTGGCAGGCTCGGACACTaGCAGACCCTGGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PLFCLIVVLSLRRIAGLCGRLGH*QTLVLA
Trigger: AGCCAGGACCAGGGTCTGCCAGTGTCCGAGCCTGCC...ACAGAGACCTGCAATTCTACGCAAGCTTAACACAACTATGAGACAGAAGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTGCAATCTCGGCACTTTaGGAGGCTAAGGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PVLGSPFLDTSASDSLRAAISAL*EAKAGS
Trigger: GCTGCCTGCCTTAGCCTCCCAAAGTGCCGAGATTGC...AGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CAA 72 bp GGCCAACCTCAGTTTCTCCAAGGGTCACAATGCTCTTaGGTCCTGAGTTACCCTCATGGGAGACGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GQPQFLQGSQCS*VLSYPHGRREA
Trigger: TGCCTCTCGTCTCCCATGAGGGTAACTCAGGACCAAAGAGCATTGTGACCCTTGGAGAAACTGAGGTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp ACTCGGCAGGCTGAGGCAAGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: TRQAEARESGREVAVSRDFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...ATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCTTGCCTCAGCCTGCCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp GTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: VVGFLLGLRRLTKGIRNVLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...AACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGCCCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: PCRGYVSSPAHSLPNGFHLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...GTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000519208.5
ENST00000639865.1
ENST00000640320.1
CDS-3UTR TCA 90 bp GTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VLSLRRIAGLCTGQFLCLQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...AAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGCTTAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGACAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ACWCPTFSSSLALTVSSRQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...TCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000524068.5
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR TCA 90 bp CTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: LHGGWTVLLLHFLFLGRSLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...AGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGGCCTGGGGTCCCTCTaGAGAGACCTTGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITGLGSL*RDLGCS
Trigger: TGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGCC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGCTGAGGCCTTCTCTTaGGGCCTGTGCTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITAEAFS*GLCSGG
Trigger: ACCCCCAGAGCACAGGCCTCAAGAGAAGGCCTCAGC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTCTCAGACCCAGATGTaGCGGGGTGTGTGGCCCGAG +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITSQTQM*RGVWPE
Trigger: CTCGGGCCACACACCCCGTCACATCTGGGTCTGAGA...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp CTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCAGTCCTTGCGTCCCATaGGGTCTTCCCGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LFLGGRTNCAHLEDVAVTSPCVP*GLPARP
Trigger: AGGCCTTGCGGGAAGACCTCATGGGACGCAAGGACT...GGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGCTGGGCCTCTGGTTCTaGCACTTTCTGCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQLGLWF*HFLLEA
Trigger: AGCTTCCAGCAGAAAGTGTCAGAACCAGAGGCCCAG...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTGCGAAACTGTTTGTCACTaGCCTTCTGGGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSWESFSRYFSQRLSEGCETVCH*PSGVPR
Trigger: CCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTC...GCAGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
CDS-3UTR TCA 90 bp AGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCTGTGTGTGTGTGTGCTaGTGTTTCCTGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGYVSSPAHSLPNGFHFLCVCVC*CFLGAL
Trigger: CAGGGCACCCAGGAAACATCAGCACACACACACACA...GAGAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTAATGCTCTTTGGTCCTaGGTTACCCTCATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLNALWS*VTLMGD
Trigger: GTCTCCCATGAGGGTAACTCAGGACCAAAGAGCATT...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGGCACTCCAGCCTAGGTaGCAGAGTGACACCCCATCT +
Preference number: 4 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSALQPR*QSDTPS
Trigger: AGATGGGGTGTCACTCTGTCACCTAGGCTGGAGTGC...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp ACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGAAGGCTGACCCGCGGCTaGTTGAGTCCCTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TVSSRDLSGSSETCPCSRRLTRG*LSPSPR
Trigger: TCTGGGAGAGGGACTCAATCAGCCGCGGGTCAGCCT...TCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGTCCACTGTGGCCTGTaGGGACGAGAGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSVHCGL*GRELWA
Trigger: TGCCCAGAGCTCTCGTCCTCACAGGCCACAGTGGAC...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp ACTCGGCAGGCTGAGGCAAGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATTATCCACTCATTGCTTaGTGGGCAGTTAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: TRQAEARESGREVAVSRDYPLIA*WAVRLV
Trigger: AACCAACCTAACTGCCCATCAAGCAATGAGTGGATA...ATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCTTGCCTCAGCCTGCCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVRASFSAFFQDQGLGCKFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...CTTGCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GCTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: AASHSQPAGVPRFLLHWHFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...GTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp CGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RGPGSSILDEGCLLKHTPCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...AGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR GCA 90 bp CTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LHIPSLLVSHVFFFTGTDGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp CCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PSLLVSHVFFFTGTDSFFGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp GCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ACVELQVSVRASFSAFFQRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...CTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HAQWSLGPERNCLSLTFWRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...CCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
CDS-3UTR GCA 90 bp CAGTGTGAAAAAGACTGCTTGGCCCTTTACAGGGAAAGCAGGTCCACTGTGGCCCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QCEKDCLALYRESRSTVARLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...GGCCACAGTGGACCTGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: ASWSLHHCSSLISKPSAATEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: LLQTWYTLILDKVSLGVVEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...GACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: ASWSLHHCSSLISKPSAAGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: LTVSSRDLSGSSETCPCSPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...ACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTTCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ASWSLHHCSSLISKPSAASAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCTCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PTFSSSLALTVSSRDLSGSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...GCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGTCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCGGTGGCAGGACAAATTaGGCCCATTTAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSGGRTN*AHLEDV
Trigger: CACATCCTCTAAATGGGCGCAATTTGTCCTGCCACC...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGCTCTGGGGGTCCCTTaGTTAGCCTGTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQALGVP*LACAGP
Trigger: TGGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACAGGGTCGAGGATTCTGTaGCTCCAGGACCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTGSRIL*LQDQGP
Trigger: GGGCCCCTGGTCCTGGAGGCACAGAATCCTCGACCC...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523084.5
ENST00000639933.1
CDS-3UTR GCA 90 bp TCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTCCTGGAAGGGCTCGCTaGAGGCCTGCGCCCCACTTG +
Preference number: 4 (lower is better)
Translates to: SRDLSGSSETCPCSRFNFPGRAR*RPAPHL
Trigger: CAAGTGGGGCGCAGGCCTGCAGCGAGCCCTTCCAGG...AAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp GCCTGGGGTCCCTCTGAAGAGACCTTGGCTGCTCACTGTCCACATGTGAACTTTATCGTCAGGTTGACCTaGTGGCCAACCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: AWGPSEETLAAHCPHVNFIVRLT*WPTSVS
Trigger: AGAAACTGAGGTTGGCCAGCAGGTCAACCTGACGAT...AAAGTTCACATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGGACCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGGGACAAAGGTCCCCGTaGTCCACGCAGAATGAGACG +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLGQRSP*STQNET
Trigger: CGTCTCATTCTGCGTGGAGCACGGGGACCTTTGTCC...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGGCCAGTGTGGTGGTGTaGATCTGTGGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLASVVV*ICGPSY
Trigger: GTAGCTGGGACCACAGATGCACACCACCACACTGGC...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAAGATAGAGTGGGTCCCTaGAGCACTGCCACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: EAVRLGQALILRVSKTKQDRVGP*STATQA
Trigger: TGCCTGGGTGGCAGTGCTGCAGGGACCCACTCTATC...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTTTCTTCTAGAGACCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CLSLTFWGPQATSEPPESFLLET*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGGTCTCTAGAAGAAA...GGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
CDS-3UTR GCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGAGCCTTTCCAGATTCTaGTCCATCCATTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWSLSRF*SIHFTS
Trigger: GGAAGTGAAATGGATGGAGCAGAATCTGGAAAGGCT...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000639215.1
ENST00000639837.1
CDS-3UTR GCA 90 bp CTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTAGCCTTTCCAGATTCTaGTCCATCCATTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: LHGGWTVLLLHFLFLGRSSLSRF*SIHFTS
Trigger: GGAAGTGAAATGGATGGAGCAGAATCTGGAAAGGCT...AGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000639215.1
ENST00000639837.1
CDS-3UTR GCA 90 bp ACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGAAGGCAGCCAAGCGCGTaGGCTCTGCATTTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: TVSSRDLSGSSETCPCSRRQPSA*ALHLSR
Trigger: GCGGGACAAATGCAGAGCGCACGCGCTTGGCTGCCT...TCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGTGCCCCATCATCTCTTaGATGGAGGAGTGTAATAAT +
Preference number: 4 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQCPIIS*MEECNN
Trigger: ATTATTACACTCCTCCATGCAAGAGATGATGGGGCA...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTCTGGGCCAACCAGGTTaGTTCTCCTGCAAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: HIPSLLVSHVFFFTGTDSLGQPG*FSCKKD
Trigger: GTCCTTTTTGCAGGAGAAGCAACCTGGTTGGCCCAG...ACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524068.5
ENST00000640706.1
CDS-3UTR CCA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCTGGACCAGCTGGCCTaGGGTCCCTCTGAAGAGACC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITLDQLA*GPSEET
Trigger: GGTCTCTTCAGAGGGACCCCAGGCCAGCTGGTCCAG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCTGTGCTGGACCAGCTaGCCTGGGGTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITLCWTS*PGVPLK
Trigger: CTTCAGAGGGACCCCAGGCCAGCTGGTCCAGCACAG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGTTGTCACTGACCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLLSLTF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAA...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000519208.5
ENST00000639865.1
ENST00000640320.1
CDS-3UTR CCA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCACGCTCAGTGGTCACTaGGACCAGAGAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: REKQCESSDRVGPCSTATTLSGH*DQRETV
Trigger: AACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGT...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCACGCTCAGTGGTCACTaGGACCAGAGAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: QWSLGPERNCLSLTFWGPTLSGH*DQRETV
Trigger: AACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGT...GGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp CCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: PSLLVSHVFFFTGTDSFFLRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...GAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCATGTGCTGATGTTTCCTaGGTGCCCTGGCTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: RRIAGLCTGQFLCLLPGSCADVS*VPWLLA
Trigger: TGCAAGGAGCCAGGGCACCCAGGAAACATCAGCACA...TGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTCCTGAGTTACCCTCATaGGAGACGAGAGGCATGGGA +
Preference number: 4 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTPELPS*ETRGMG
Trigger: TCCCATGCCTCTCGTCTCCCATGAGGGTAACTCAGG...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGCCTCTCGAGTGGCTaGGATTATAGGCGTGCACAA +
Preference number: 4 (lower is better)
Translates to: ASDRKDKKPGWEDGLSAGSLSSG*DYRRAQ
Trigger: TTGTGCACGCCTATAATCCCAGCCACTCGAGAGGCT...ACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTAAAGCAGCGATAGAGTaGGTCCCTGCAGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTKAAIE*VPAALP
Trigger: TGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTT...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGGTAATCCCAGTACTTTaGGAGGCCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSVIPVL*EAEAGG
Trigger: TCCACCCGCCTCGGCCTCCCAAAGTACTGGGATTAC...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGACTGGTGCTGGGGTCTaGCTTCTCTCACCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSTGAGV*LLSPQE
Trigger: TTCCTGGGGTGAGAGAAGCCAGACCCCAGCACCAGT...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCTGCAGCTGCAGAGGTaGCAGCACCGAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITLQLQR*QHRAPC
Trigger: ACAGGGAGCTCGGTGCTGCCACCTCTGCAGCTGCAG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GGCAGCAGGGTATGTGTTTCGGGTCACTCACAGGGCTCAGCACCACTCCTCATGGTGAAAAAGACTGCTTaGCCCTTTACAGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GSRVCVSGHSQGSAPLLMVKKTA*PFTGKA
Trigger: TGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCAC...CATGAGGAGTGGTGCTGAGCCCTGTGAGTGACCCGAAACACATACCCTGCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCCAGGAGCTCCGTGTCTaGGGAACTCTGTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: PSLLVSHVFFFTGTDSFFQELRV*GTLFER
Trigger: TCTCTCAAACAGAGTTCCCCAGACACGGAGCTCCTG...GAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR TCA 90 bp GGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: GLCTGQFLCLLPGSGVRVFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...CACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp CAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: QWSLGPERNCLSLTFWGPLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...GGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
CDS-3UTR TCA 90 bp TGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: WCPTFSSSLALTVSSRDLQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...CAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000524068.5
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR TCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCAGTCCTTGCGTCCCATaGGGTCTTCCCGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITSPCVP*GLPARP
Trigger: AGGCCTTGCGGGAAGACCTCATGGGACGCAAGGACT...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCTGGGCCTCTGGTTCTaGCACTTTCTGCTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQLGLWF*HFLLEA
Trigger: AGCTTCCAGCAGAAAGTGTCAGAACCAGAGGCCCAG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGTGCTCCACGCAGAATaGGACGATGGCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITVLHAE*DDGPDP
Trigger: TGGGTCAGGGCCATCGTCTCATTCTGCGTGGAGCAC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTGTTTGGGCAACATGGTaGAACCCCCTCTTCTACAAA +
Preference number: 4 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLVWATW*NPLFYK
Trigger: TTTGTAGAAGAGGGGGTTTCACCATGTTGCCCAAAC...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTCTGTTTGAGAGAGGATaGTCCCAGCTGTGGCATGCT +
Preference number: 4 (lower is better)
Translates to: FPACWCPTFSSSLALTVSLFERG*SQLWHA
Trigger: AGCATGCCACAGCTGGGATCATCCTCTCTCAAACAG...AGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR TCA 90 bp ATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCCTGGGGAACTCTGTTTaGGAGAGGATGATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: IPSLLVSHVFFFTGTDSFLGNSV*ERMIPA
Trigger: AGCTGGGATCATCCTCTCTCAAACAGAGTTCCCCAG...GAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp CTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCGGAAGAGGCGGCAGCTaGAGCAGCGTAGCACCCGAG +
Preference number: 4 (lower is better)
Translates to: LLQTWYTLILDKVSLGVVGRGGS*SSVAPE
Trigger: CTCGGGTGCTACGCTGCTGCAGCTGCCGCCTCTTCC...GACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: NCRSLYGPVSLPSSRIRGFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...ACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: DMASTISTRAFTISLVSQCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...CTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
CDS-3UTR GCA 90 bp CCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PACWCPTFSSSLALTVSSRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...AGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000524068.5
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp CCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PVLGSPFLDTSASDSLRARLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...AGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp TGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: WCPTFSSSLALTVSSRDLTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...CAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LTVSSRDLSGSSETCPCSGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...ACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCCCGGCACTGCAGTCTaGAGAGTTCTCCTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITPGTAV*RVLLEA
Trigger: TGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp TCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAATCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLRAASWSLHHCSSLISKSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...TTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGCTCTGGGGGTCCCTTaGTTAGCCTGTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITALGVP*LACAGP
Trigger: TGGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp ACTTCGTCAACTGTGACAAAAGACAGAATTATCACACACACGCTCAGTGGTCACCGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TSSTVTKDRIITHTLSGHRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...GTGACCACTGAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR GCA 90 bp AGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCACGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SRFNFWTWRLQSAPEPSPRHPCL*SRQAAK
Trigger: CTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCG...TGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR GCA 90 bp AGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACGCCCAGCACATAGCTTaGCTAATGGCTTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: RASAMLVSLRAASWSLHHAQHIA*LMAFTF
Trigger: GAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGC...GTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGGTTGTGCTGCTTACAAAGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTGGACAAAGGTCCCCGTaGTCCACGCAGAATGAGACG +
Preference number: 4 (lower is better)
Translates to: GLCCLQREKQCESSDRVGGQRSP*STQNET
Trigger: CGTCTCATTCTGCGTGGAGCACGGGGACCTTTGTCC...ACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCTTTGTAAGCAGCACAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGCCTGTGATCCCAGCTaGTCGGGAGGATCACTTAAG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQACDPS*SGGSLK
Trigger: CTTAAGTGATCCTCCCGAGCAGCTGGGATCACAGGC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCCCTCTCGTGTCTGGGGAACTCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VYNQHQSLHHKPGKPAPLVSGEL*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGAGTTCCCCAGACAC...GAGAGGGGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR GCA 90 bp GGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGGTGTCTGGGGAACTCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GIRNVGFTESCLLVSSPLVSGEL*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGAGTTCCCCAGACAC...CAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CTGAAGCGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACCCAGGTTGCTTCTCCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKRGPGSSILDEGCLLKHPGCFS*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGGAGAAGCAACCTGG...GTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000524068.5
ENST00000640706.1
CDS-3UTR GCA 90 bp TTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTCTGGGCCAACCAGGTTaGTTCTCCTGCAAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: FPACWCPTFSSSLALTVSLGQPG*FSCKKD
Trigger: GTCCTTTTTGCAGGAGAAGCAACCTGGTTGGCCCAG...AGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524068.5
ENST00000640706.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGGAGGCAGGGGCTGCTaGCTGTTTCACCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQGGRGC*LFHLPC
Trigger: ACATGGAAGGTGAAACAGGCAGCAGCCCCTGCCTCC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610475.4
ENST00000638399.1
CDS-3UTR CCA 90 bp CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: PCRGYVSSPAHSLPNGFHSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTGGCTGTAACCTGCTaGATGGGACTCCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPVAVTC*MGLHSS
Trigger: GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCAC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGTGGCTGTAACCTGCTaGATGGGACTCCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQVAVTC*MGLHSS
Trigger: GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCAC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp TATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGGACAAGAAACCCGGGTaGGAAGATGGGCTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: YHTHAQWSLGPERNCLSLDKKPG*EDGLSA
Trigger: CGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC...CAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR CCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGGACAAGAAACCCGGGTaGGAAGATGGGCTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSDKKPG*EDGLSA
Trigger: CGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCCAGCTGTGGCATGCTaGGACTCCCTGGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGSSETCPCSRFNFWTWRPAVAC*DSLEGL
Trigger: GAGCCCTTCCAGGGAGTCCCAGCATGCCACAGCTGG...ACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR CCA 90 bp AGATTCAAAGCCACTTACTTACCCAGGATCACAAAACTAGTTGGCGGCAACATCATGCAGCCCAGGGACTaGCCCGTGGCAGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: RFKATYLPRITKLVGGNIMQPRD*PVADSL
Trigger: CAGAGAGTCTGCCACGGGCCAGTCCCTGGGCTGCAT...GATGTTGCCGCCAACTAGTTTTGTGATCCTGGGTAAGTAAGTGGCTTTGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GGGTTGTGCTGCTTACAAAGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTGTAATCCCAGTACTTTaGGAGGCCGAGGCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLCCLQREKQCESSDRVGVIPVL*EAEAGG
Trigger: TCCACCCGCCTCGGCCTCCCAAAGTACTGGGATTAC...ACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCTTTGTAAGCAGCACAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GCTCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGCAGGAGCTCCGTGTCTaGGGAACTCTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: APVLGSPFLDTSASDSLRQELRV*GTLQKG
Trigger: TCCTTTTTGCAGAGTTCCCCAGACACGGAGCTCCTG...CCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000639215.1
ENST00000639837.1
CDS-3UTR CCA 90 bp CCCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTTCTGATGAAGGCGGCTaGCTCACCAGGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLFCLIVVLSLRRIAGLCSDEGG*LTRLLQ
Trigger: CTGCAGGAGCCTGGTGAGCCAGCCGCCTTCATCAGA...ACAGAGACCTGCAATTCTACGCAAGCTTAACACAACTATGAGACAGAAGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTCACCACCTGGCTGCCTaGTGTCGCAGTGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSHHLAA*CRSGRV
Trigger: AACTCTGCCACTGCGACACCAGGCAGCCAGGTGGTG...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp ACTCGGCAGGCTGAGGCAAGAGAATCAGGCAGGGAGGTTGCAGTGAGCCGAGATCCATCATCTCTTGCATaGAGGAGTGTAATAATTGGC +
Preference number: 4 (lower is better)
Translates to: TRQAEARESGREVAVSRDPSSLA*RSVIIG
Trigger: GCCAATTATTACACTCCTCCATGCAAGAGATGATGG...ATCTCGGCTCACTGCAACCTCCCTGCCTGATTCTCTTGCCTCAGCCTGCCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp GGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: GIRNVGFTESCLLVSSPLFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...CAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp TTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: FLLGLRRLTKGIRNVGFTLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...AGTGAAACCAACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: GFRQKRQETRVGRWAFCGLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...CCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000519208.5
ENST00000639865.1
ENST00000640320.1
CDS-3UTR TCA 90 bp CGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: RGPGSSILDEGCLLKHTPLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...AGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR TCA 90 bp CAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: QWSLGPERNCLSLTFWGPLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...GGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR TCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR TCA 90 bp CTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTTGTGTGTGTGTGTGCTaGTGTTTCCTGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LTVSSRDLSGSSETCPCSCVCVC*CFLGAL
Trigger: CAGGGCACCCAGGAAACATCAGCACACACACACACA...ACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp GTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTGCAAAACAAGTGACATaGAGGGAGGGTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VLSLRRIAGLCTGQFLCLAKQVT*REGPCV
Trigger: CACACAGGGACCCTCCCTTCATGTCACTTGTTTTGC...AAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGCTTAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTGACCCATCGTCAGGTTaGCCTGCTGGCCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: LRVSKTKQINAFHLTANLDPSSG*PAGQPQ
Trigger: CTGAGGTTGGCCAGCAGGTCAACCTGACGATGGGTC...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GGGTTGTGCTGCTTACAAAGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTGGCTTCAGTAGGCTATaGCTGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GLCCLQREKQCESSDRVGGFSRL*LCHCTP
Trigger: TGGAGTGCAGTGGCACAGTCATAGCCTACTGAAGCC...ACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCTTTGTAAGCAGCACAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCCAGGACAAAGCAACAGGCTTaGGGGAGCATGAAACACAAT +
Preference number: 4 (lower is better)
Translates to: KSNVKAAIEWVPAALPPRTKQQA*GSMKHN
Trigger: ATTGTGTTTCATGCTCCCTCAAGCCTGTTGCTTTGT...CCTGGGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTGTTTGGGCAACATGGTaGAACCCCCTCTTCTACAAA +
Preference number: 4 (lower is better)
Translates to: ASDRKDKKPGWEDGLSAGVWATW*NPLFYK
Trigger: TTTGTAGAAGAGGGGGTTTCACCATGTTGCCCAAAC...ACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGAACCAAAGATGCTCTaGAAGTTGGGTGTCGGCCGG +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQEPKML*KLGVGR
Trigger: CCGGCCGACACCCAACTTTCAGAGCATCTTTGGTTC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCTTGGAGCAGAGAATCTaGCTGAACAGTCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HGVYNQHQSLHHKPGKPALEQRI*LNSLSR
Trigger: TCTGGAAAGACTGTTCAGTCAGATTCTCTGCTCCAA...GGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR TCA 90 bp ACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGACCAGCCCCTCTCTTCTaGGACCCAATCCCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: TVSSRDLSGSSETCPCSRPAPLF*DPIPVD
Trigger: GTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGG...TCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639381.1
ENST00000640706.1
CDS-3UTR TCA 90 bp GGTATGTGTTTCGGGTCACTCACAGGGCTCAGCACCACTCCTCATGGCTTCCTTTATCCACTCATTGCTTaGTGGGCAGTTAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: GMCFGSLTGLSTTPHGFLYPLIA*WAVRLV
Trigger: AACCAACCTAACTGCCCATCAAGCAATGAGTGGATA...AAGGAAGCCATGAGGAGTGGTGCTGAGCCCTGTGAGTGACCCGAAACACATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp TTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACATTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FTFPACWCPTFSSSLALTFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...TGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp TTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FPACWCPTFSSSLALTVSFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...AGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp CTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LILDKVSLGVVSRQAGEAFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...GGCCTCCCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTGCTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSWESFSRYFSQRLSEGCFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...GCAGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR GCA 90 bp ACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TFPACWCPTFSSSLALTVCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...AACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp GTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VLSLRRIAGLCTGQFLCLGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...AAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGCTTAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp ACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TVSSRDLSGSSETCPCSRSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...TCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGATGTGGCTGTAACCTaGTGGATGGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQDVAVT*WMGLHS
Trigger: GCTATGGAGTCCCATCCAGCAGGTTACAGCCACATC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGATGTGGCTGTAACCTaGTGGATGGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPDVAVT*WMGLHS
Trigger: GCTATGGAGTCCCATCCAGCAGGTTACAGCCACATC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp TACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGCTGATGTTTCCTGGGTaGCCTGGCTCCTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: YTLILDKVSLGVVSRQAGLMFPG*PGSLQQ
Trigger: CTGCTGCAAGGAGCCAGGGCACCCAGGAAACATCAG...CCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGACCCTAAGTGAAGAGTaGCTCACATACAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GFRQKRQETRVGRWAFCGTLSEE*LTYKSP
Trigger: TGGACTCTTGTATGTGAGGCACTCTTCACTTAGGGT...CCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTCTGCAGCACTGGATATaGGGTGGGGCCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: LRVSKTKQINAFHLTANLLQHWI*GGACWT
Trigger: AGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAG...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACAGGGTCCCTGCAGCACTaGCACCCAGGCAGTACAGAA +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTGSLQH*HPGSTE
Trigger: TTCTGTACTGCCTGGGTGGCAGTGCTGCAGGGACCC...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGAGTGAGCCAAGATCGTaGCATTACACTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLSEPRS*HYTPAR
Trigger: CCTGGCTGGAGTGTAATGGCACGATCTTGGCTCACT...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGTTTCTTCTAGAGACCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWFLLET*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGGTCTCTAGAAGAAA...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGGAGGCAGGGGCTGCTaGCTGTTTCACCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITGGRGC*LFHLPC
Trigger: ACATGGAAGGTGAAACAGGCAGCAGCCCCTGCCTCC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610475.4
ENST00000638399.1
CDS-3UTR CCA 90 bp AGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGYVSSPAHSLPNGFHFLTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...GAGAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp TCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSSWESFSRYFSQRLSEGTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...GCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR CCA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: SVRASFSAFFQDQGLGCKSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...CTTGCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp CTGAAGCGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: LKRGPGSSILDEGCLLKHSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCGCTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR CCA 90 bp GGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: GIRNVGFTESCLLVSSPLSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...CAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGTGGCTGTAACCTGCTaGATGGGACTCCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQVAVTC*MGLHSS
Trigger: GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCAC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACCTCTGAAGAGACCTTaGCTGCTCACTGTCCACATG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPPLKRP*LLTVHM
Trigger: CATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCCTCTGAAGAGACCTTaGCTGCTCACTGTCCACATG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQPLKRP*LLTVHM
Trigger: CATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGTCACATAGTCGTGTaGGTCGAGGATTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPGHIVV*VEDSVP
Trigger: AGGCACAGAATCCTCGACCCACACGACTATGTGACC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTTTGTCACTGACCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: CELFLGGRTNCAHLEDVALSLTF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAA...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp AATTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCATTGTCACTGACCTTCTaGGGTCCCCAGGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: NYHTHAQWSLGPERNCLSLSLTF*GPQATS
Trigger: TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAA...TGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp GCTCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGACGCTCAGTGGTCACTaGGACCAGAGAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: APVLGSPFLDTSASDSLRTLSGH*DQRETV
Trigger: AACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGT...CCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
CDS-3UTR CCA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAACACACACACGCTCAGTaGTCACTGGGACCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: EAVRLGQALILRVSKTKQHTHAQ*SLGPER
Trigger: TCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTG...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTCACACACACGCTCAGTaGTCACTGGGACCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSHTRSVVTGTREKLFVTHTHAQ*SLGPER
Trigger: TCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTG...AGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp CAGAATTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGCACACACACGCTCAGTaGTCACTGGGACCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: QNYHTHAQWSLGPERNCLHTHAQ*SLGPER
Trigger: TCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTG...CAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CCA 90 bp GTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: VLSLRRIAGLCTGQFLCLLRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...AAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGCTTAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp ACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCTGCTACAGACCTaGTACACTCTGATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: TPPCRGYVSSPAHSLPNGFLLQT*YTLILD
Trigger: ATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAA...GCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGAGCCTCTCGAGTGGCTaGGATTATAGGCGTGCACAA +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLSLSSG*DYRRAQ
Trigger: TTGTGCACGCCTATAATCCCAGCCACTCGAGAGGCT...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCATAGTCCCAGCACTTTaGGAAGTGGGAAGATTGCTT +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSIVPAL*EVGRLL
Trigger: AAGCAATCTTCCCACTTCCCAAAGTGCTGGGACTAT...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGCATCCGAGTCAGCCTaGGCCAACCAGGTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSASESA*ANQVAS
Trigger: AGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGC...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639381.1
ENST00000640706.1
CDS-3UTR CCA 90 bp CTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAAAGCAGGTCCACTGTaGCCTGTGAGGACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LTVSSRDLSGSSETCPCSKAGPL*PVRTRA
Trigger: AGCTCTCGTCCTCACAGGCCACAGTGGACCTGCTTT...ACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CCCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTTGCTTACACACCACCTaGCTGCCTGGTGTCGCAGTG +
Preference number: 4 (lower is better)
Translates to: PLFCLIVVLSLRRIAGLCCLHTT*LPGVAV
Trigger: CACTGCGACACCAGGCAGCCAGGTGGTGTGTAAGCA...ACAGAGACCTGCAATTCTACGCAAGCTTAACACAACTATGAGACAGAAGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp GGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCATTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: GHGVYNQHQSLHHKPGKPFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...TGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR TCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LRVSKTKQINAFHLTANLQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GCTTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: ACVELQVSVRASFSAFFQLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...CTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp TTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: FLLGLRRLTKGIRNVGFTLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...AGTGAAACCAACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCACTGCAGCGCGCTCCTaGCCCCTCCCTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: VDYFLLQTWYTLILDKVSTAARS*PLPAGA
Trigger: AGCCCCTGCAGGGAGGGGTCAGGAGCGCGCTGCAGT...GCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAAATAATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATTGAGCTCAGGAGTTTaGGACAAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPLSSGV*DKPGQH
Trigger: ATGTTGCCCAGGCTTGTCTCAAACTCCTGAGCTCAA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACGGCAACATCAAAGTTTaGATTCTGCTTCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: KTRNPGGKMGFLRVGIAHGNIKV*ILLLGM
Trigger: CATGCCAAGAAGCAGAATTCAAACTTTGATGTTGCC...GTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TGCGCCCATTTAGAGGATGTGGCTGTAACCTGCTGGATGGGACTCCATAGCTCCGGCAACATCAAAGTTTaGATTCTGCTTCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: CAHLEDVAVTCWMGLHSSGNIKV*ILLLGM
Trigger: CATGCCAAGAAGCAGAATTCAAACTTTGATGTTGCC...GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCACATCCTCTAAATGGGCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCTTGGAGCAGAGAATCTaGCTGAACAGTCTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: HGVYNQHQSLHHKPGKPALEQRI*LNSLQK
Trigger: TTTTTGCAGACTGTTCAGTCAGATTCTCTGCTCCAA...GGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
CDS-3UTR TCA 90 bp GTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTAAAAGATGTGACAGGTaGAATGCCTATTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: VVGFLLGLRRLTKGIRNVKRCDR*NAYFSV
Trigger: GACACTGAAATAGGCATTTCACCTGTCACATCTTTT...AACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGCCCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp CCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PTFSSSLALTVSSRDLSGCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...GCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp ACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TFSSSLALTVSSRDLSGSGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...GCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: CISINNLPVPDHTSSSKSPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCCCTGGAGGCAGGGGCTaGTGCCTTGTTTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: LLQTWYTLILDKVSLGVVPGGRG*CLVSPS
Trigger: GGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGG...GACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACATCAGCTCCCCGGCACTaGAGTCTGCAGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTSAPRH*SLQSSP
Trigger: AGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGA...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGGTTGTGCTGCTTACAAAGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTGATGTGGCTGTAACCTaGTGGATGGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: GLCCLQREKQCESSDRVGDVAVT*WMGLHS
Trigger: GCTATGGAGTCCCATCCAGCAGGTTACAGCCACATC...ACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCTTTGTAAGCAGCACAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCGATGTGGCTGTAACCTaGTGGATGGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: LFLGGRTNCAHLEDVAVTDVAVT*WMGLHS
Trigger: GCTATGGAGTCCCATCCAGCAGGTTACAGCCACATC...GGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGATGTGGCTGTAACCTaGTGGATGGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQDVAVT*WMGLHS
Trigger: GCTATGGAGTCCCATCCAGCAGGTTACAGCCACATC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGTGGCAGGACAAATTaGGCCCATTTAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPGGRTN*AHLEDV
Trigger: CACATCCTCTAAATGGGCGCAATTTGTCCTGCCACC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGGTGGCAGGACAAATTaGGCCCATTTAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQGGRTN*AHLEDV
Trigger: CACATCCTCTAAATGGGCGCAATTTGTCCTGCCACC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp AAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCCAGGTCTCGATTAATAACCTaGCAGTCCCAGATCACACAT +
Preference number: 4 (lower is better)
Translates to: KSNVKAAIEWVPAALPPRSRLIT*QSQITH
Trigger: ATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGA...CCTGGGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTACATCGGGAAAGGGGTaGGCTGGCTCCATTCTGCTA +
Preference number: 4 (lower is better)
Translates to: CELFLGGRTNCAHLEDVATSGKG*AGSILL
Trigger: TAGCAGAATGGAGCCAGCGCACCCCTTTCCCGATGT...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACGACAAAGCAAATAAATaGCTTCCACCTCACCGCAAA +
Preference number: 4 (lower is better)
Translates to: KTRNPGGKMGFLRVGIAHDKANK*LPPHRK
Trigger: TTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTC...GTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCGCCCAGCACATAGCTTaGCTAATGGCTTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: RGYVSSPAHSLPNGFHFLAQHIA*LMAFTF
Trigger: GAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGC...GAGAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp ATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCGCCCAGCACATAGCTTaGCTAATGGCTTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: IPSLLVSHVFFFTGTDSFAQHIA*LMAFTF
Trigger: GAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGC...GAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp TCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTGGCCTGCGCCCCACTTaGTTTCTGTTTTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: SSLALTVSSRDLSGSSETGLRPT*FLFCRT
Trigger: AGTCCTACAAAACAGAAAGCAAGTGGGGCGCAGGCC...AGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTCTCCAAGGGTCACAATaGTCTTTGGTCCTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTLQGSQ*SLVLSY
Trigger: GTAACTCAGGACCAAAGAGCATTGTGACCCTTGGAG...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCATATGCGGTGGGGCCTaGTGGACTGGAAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITICGGA*WTGSFK
Trigger: CTTGAAGCTTCCAGTCCAGCAGGCCCCACCGCATAT...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGGTTGTGCTGCTTACAAAGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTAGGCAGAGCAAACCCTaGACTCTGCAGCACTGGATA +
Preference number: 4 (lower is better)
Translates to: GLCCLQREKQCESSDRVGRQSKP*TLQHWI
Trigger: TATCCAGTGCTGCAGAGTGCAGGGTTTGCTCTGCCT...ACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCTTTGTAAGCAGCACAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTGGGTCCCTGCAGCACTaGCACCCAGGCAGTACAGAA +
Preference number: 4 (lower is better)
Translates to: CISINNLPVPDHTSSSKSGSLQH*HPGSTE
Trigger: TTCTGTACTGCCTGGGTGGCAGTGCTGCAGGGACCC...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTGTGTCTGGGGAACTCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PVLGSPFLDTSASDSLRAVSGEL*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGAGTTCCCCAGACAC...AGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000639215.1
ENST00000639837.1
CDS-3UTR GCA 90 bp CTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACCAGTGTGAAAAAGACTaGTTGGCCCTTTACAGGGAA +
Preference number: 4 (lower is better)
Translates to: LHIPSLLVSHVFFFTGTDQCEKD*LALYRE
Trigger: TTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTG...GTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp ATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCCCAGGTTGCTTCTCCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IPSLLVSHVFFFTGTDSFPGCFS*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGGAGAAGCAACCTGG...GAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524068.5
ENST00000640706.1
CDS-3UTR CCA 90 bp CTGCAATCTCGGCACTTTGGGAGGCTAAGGCAGGCAGCTGGGAGGTGGAGGTTGAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: LQSRHFGRLRQAAGRWRLSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...CAACCTCCACCTCCCAGCTGCCTGCCTTAGCCTCCCAAAGTGCCGAGATTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR CCA 90 bp GCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: ASDRKDKKPGWEDGLSAGSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...ACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000519208.5
ENST00000639865.1
ENST00000640320.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGTGGCTGTAACCTGCTaGATGGGACTCCATAGCTCC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITVAVTC*MGLHSS
Trigger: GGAGCTATGGAGTCCCATCCAGCAGGTTACAGCCAC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGGTCACATAGTCGTGTaGGTCGAGGATTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQGHIVV*VEDSVP
Trigger: AGGCACAGAATCCTCGACCCACACGACTATGTGACC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp TCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: SLRAASWSLHHCSSLISKLRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...TTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp CTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCCAGCTGTGGCATGCTaGGACTCCCTGGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LKLVPVVDLTFGHGVYNQPAVAC*DSLEGL
Trigger: GAGCCCTTCCAGGGAGTCCCAGCATGCCACAGCTGG...CTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR CCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACATGCGGTGGGGCCTGCTaGACTGGAAGCTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTCGGAC*TGSFKN
Trigger: GTTCTTGAAGCTTCCAGTCCAGCAGGCCCCACCGCA...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTCAGGAGCTCCGTGTCTaGGGAACTCTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LTVSSRDLSGSSETCPCSQELRV*GTLQKG
Trigger: TCCTTTTTGCAGAGTTCCCCAGACACGGAGCTCCTG...ACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000522663.5
ENST00000639381.1
ENST00000639837.1
CDS-3UTR CCA 90 bp GGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCCCTTGGAATGAGATTCTATaGACTTGGAGCAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: GVYNQHQSLHHKPGKPAPWNEIL*TWSRES
Trigger: AGATTCTCTGCTCCAAGTCCATAGAATCTCATTCCA...AGGGGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR TCA 90 bp GCTCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: APVLGSPFLDTSASDSLRFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...CCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR TCA 90 bp CCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: PTFSSSLALTVSSRDLSGLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...GCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR TCA 90 bp TTTGGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTTTCCAGCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: FGHGVYNQHQSLHHKPFQLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...CTGGAAAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR TCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: LILDKVSLGVVSRQAGEALLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...GGCCTCCCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp AGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTGCCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: SSWESFSRYFSQRLSEGCLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...GCAGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACTCACTGTCCACATGTaGACTTTTTCTAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPLTVHM*TFSRWQ
Trigger: CTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCTCACTGTCCACATGTaGACTTTTTCTAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQLTVHM*TFSRWQ
Trigger: CTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTAGGCCAGCCTGTCCCTaGAAGAGAAGATGGCCATGC +
Preference number: 4 (lower is better)
Translates to: CISINNLPVPDHTSSSKSRPACP*KRRWPC
Trigger: GCATGGCCATCTTCTCTTTCAGGGACAGGCTGGCCT...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCGGCTGCTATGAGGTGTaGTTGTACCATTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LFLGGRTNCAHLEDVAVTGCYEV*LYHCTP
Trigger: TGGAGTGCAATGGTACAATCACACCTCATAGCAGCC...GGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GAAGCTGTCAGGCTGGGACAGGCTTTGATTTTGAGGGTTAGCAAGACAAAGCAAGGCTGCTATGAGGTGTaGTTGTACCATTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: EAVRLGQALILRVSKTKQGCYEV*LYHCTP
Trigger: TGGAGTGCAATGGTACAATCACACCTCATAGCAGCC...TTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCCCTCTCTTCAGCAGAGAATCTGACTaGACAGTCTTTCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: YNQHQSLHHKPGKPAPLFSRESD*TVFPDS
Trigger: AGAATCTGGAAAGACTGTTCAGTCAGATTCTCTGCT...GAAGAGAGGGGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp TTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LSHTRSVVTGTREKLFVTFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...AGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
CDS-3UTR GCA 90 bp TGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: WCPTFSSSLALTVSSRDLCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...CAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp CTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLQTWYTLILDKVSLGVVTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...GACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp GTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCGAGCCACCCGAGTCCTaGACGCCACGGCTGCACGGA +
Preference number: 4 (lower is better)
Translates to: VDYFLLQTWYTLILDKVSEPPES*TPRLHG
Trigger: TCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTC...GCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAAATAATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LLQTWYTLILDKVSLGVVGGRGC*LVSPSM
Trigger: CATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCC...GACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGATGTGGCTGTAACCTaGTGGATGGGACTCCATAGC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITDVAVT*WMGLHS
Trigger: GCTATGGAGTCCCATCCAGCAGGTTACAGCCACATC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGGTGGCAGGACAAATTaGGCCCATTTAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQGGRTN*AHLEDV
Trigger: CACATCCTCTAAATGGGCGCAATTTGTCCTGCCACC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTCGACTCTCTGAGGGCTaGGATTTTTCCTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: ASWSLHHCSSLISKPSAARLSEG*DFSCKK
Trigger: CTTTTTGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520698.5
ENST00000638829.1
CDS-3UTR GCA 90 bp GCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTGACAAAGCAAATAAATaGCTTCCACCTCACCGCAAA +
Preference number: 4 (lower is better)
Translates to: ASDRKDKKPGWEDGLSAGDKANK*LPPHRK
Trigger: TTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTC...ACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATAAGCGACGCCATCCCTaGTTGTGCAGTCGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ALKLVPVVDLTFGHGVYNKRRHP*LCSRQA
Trigger: TGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTT...ATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR GCA 90 bp CTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCCTGATGTTTCCTGGGTaGCCTGGCTCCTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LLQTWYTLILDKVSLGVVLMFPG*PGSLQQ
Trigger: CTGCTGCAAGGAGCCAGGGCACCCAGGAAACATCAG...GACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACAGATACCATTACAACATaGAGCCCAGGGACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTDTITT*SPGTGP
Trigger: CGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATC...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GCTCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGAGCCTTTCCAGATTCTaGTCCATCCATTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: APVLGSPFLDTSASDSLRSLSRF*SIHFTS
Trigger: GGAAGTGAAATGGATGGAGCAGAATCTGGAAAGGCT...CCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000639215.1
ENST00000639837.1
CDS-3UTR GCA 90 bp GGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTCAGTGTGAAAAAGACTaGTTGGCCCTTTACAGGGAA +
Preference number: 4 (lower is better)
Translates to: GPGSSILDEGCLLKHTPVQCEKD*LALYRE
Trigger: TTCCCTGTAAAGGGCCAAGCAGTCTTTTTCACACTG...AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCTTTAACTTTTGGACATaGCGTCTACAATCAGCACCA +
Preference number: 4 (lower is better)
Translates to: REKQCESSDRVGPCSTATFNFWT*RLQSAP
Trigger: TGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAA...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
CDS-3UTR CCA 90 bp ATTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IITHTLSGHWDQRETVCHTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...GTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523737.5
ENST00000640942.1
CDS-3UTR CCA 90 bp TGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CWCPTFSSSLALTVSSRDTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...GTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CCA 90 bp GGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: GPGSSILDEGCLLKHTPVSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR CCA 90 bp CCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: PVLGSPFLDTSASDSLRASSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...AGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGGTCACATAGTCGTGTaGGTCGAGGATTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITGHIVV*VEDSVP
Trigger: AGGCACAGAATCCTCGACCCACACGACTATGTGACC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp ACTTCGTCAACTGTGACAAAAGACAGAATTATCACACACACGCTCAGTGGTCACGACAAGAAACCCGGGTaGGAAGATGGGCTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: TSSTVTKDRIITHTLSGHDKKPG*EDGLSA
Trigger: CGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC...GTGACCACTGAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACAGCACTTTGGGAAGTaGGAAGATTGCTTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPQHFGK*EDCLSS
Trigger: TGAGCTCAAGCAATCTTCCCACTTCCCAAAGTGCTG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTGGTCATTCTTCTAGGATTTGGAGATTCAAAGCCACTTACTTACCCAGGATCAAGATGCTCTGAAAGTTaGGTGTCGGCCGGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: LVILLGFGDSKPLTYPGSRCSES*VSAGRS
Trigger: ACTGCGCCCGGCCGACACCCAACTTTCAGAGCATCT...TGATCCTGGGTAAGTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGCCCCTCTCTTCCTCTTCCAGTTGGCTTaGAATGAGATTCTATGGACT +
Preference number: 4 (lower is better)
Translates to: YNQHQSLHHKPGKPAPLFLFQLA*NEILWT
Trigger: AGTCCATAGAATCTCATTCCAAGCCAACTGGAAGAG...GAAGAGAGGGGCTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp CCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCCTCAGCTCTTCCAGTTaGCTTGGAATGAGATTCTAT +
Preference number: 4 (lower is better)
Translates to: PSLLVSHVFFFTGTDSFFLSSSS*LGMRFY
Trigger: ATAGAATCTCATTCCAAGCCAACTGGAAGAGCTGAG...GAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
CDS-3UTR CCA 90 bp CACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTCCATCATCTCTTGCATaGAGGAGTGTAATAATTGGC +
Preference number: 4 (lower is better)
Translates to: HIPSLLVSHVFFFTGTDSPSSLA*RSVIIG
Trigger: GCCAATTATTACACTCCTCCATGCAAGAGATGATGG...ACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000639632.2
ENST00000640320.1
CDS-3UTR TCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000639632.2
ENST00000640320.1
CDS-3UTR TCA 90 bp TCAGGTTACCGGTGCCTACAAAAGAATTTTGAGCAGAAGGGCCTCGAGACATCGTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: SGYRCLQKNFEQKGLETSFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...CGATGTCTCGAGGCCCTTCTGCTCAAAATTCTTTTGTAGGCACCGGTAACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR TCA 90 bp TGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: WCPTFSSSLALTVSSRDLLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...CAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR TCA 90 bp GCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCCAGCGACTCTCTaGGGGCTGCGATTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: ALKLVPVVDLTFGHGVYNQPATL*GLRFFL
Trigger: CAGGAAAAATCGCAGCCCTCAGAGAGTCGCTGGCTG...ATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR TCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp TATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: YHTHAQWSLGPERNCLSLLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...CAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR TCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCTCACTGTCCACATGTaGACTTTTTCTAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQLTVHM*TFSRWQ
Trigger: CTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCAATGCTCTTTGGTCCTaGGTTACCCTCATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITNALWS*VTLMGD
Trigger: GTCTCCCATGAGGGTAACTCAGGACCAAAGAGCATT...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCAGATGGAGGCTGCTATaGGGTGTGATTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: LFLGGRTNCAHLEDVAVTRWRLL*GVIVPL
Trigger: CAATGGTACAATCACACCTCATAGCAGCCTCCATCT...GGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCCAGCCCCTCTCTTCTaGGACCCAATCCCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: LKLVPVVDLTFGHGVYNQPAPLF*DPIPVD
Trigger: GTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGG...CTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR TCA 90 bp CACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTAAAAGATGTGACAGGTaGAATGCCTATTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: HIPSLLVSHVFFFTGTDSKRCDR*NAYFSV
Trigger: GACACTGAAATAGGCATTTCACCTGTCACATCTTTT...ACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp TCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCACATCTTTGCAATTGTaGGTTGTGCTGCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: SSSWESFSRYFSQRLSEGTSLQL*VVLLQI
Trigger: TATCTGGAGCAGCACAACTCACAATTGCAAAGATGT...GCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp CTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCTGTTTGAGAGAGGATaGTCCCAGCTGTGGCATGCT +
Preference number: 4 (lower is better)
Translates to: LSGSSETCPCSRFNFWTWLFERG*SQLWHA
Trigger: AGCATGCCACAGCTGGGATCATCCTCTCTCAAACAG...CCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTTTCACATTCCCAGCCTaGTGGTGTCCCACGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSFTFPA*WCPTFS
Trigger: AGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR GCA 90 bp AGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTGGCTGCGATTTTTCCTaGTGCTTCACATTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SGSSETCPCSRFNFWTWRGCDFS*CFTFPA
Trigger: GGCTGGGAATGTGAAGCAGCAGGAAAAATCGCAGCC...ACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
CDS-3UTR GCA 90 bp AGATTCAAAGCCACTTACTTACCCAGGATCACAAAACTAGTTGGCGGCAACATCCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RFKATYLPRITKLVGGNIRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...GATGTTGCCGCCAACTAGTTTTGTGATCCTGGGTAAGTAAGTGGCTTTGAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSSRDLSGSSETCPCSRFRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...AAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGGTGGCAGGACAAATTaGGCCCATTTAGAGGATGTG +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITGGRTN*AHLEDV
Trigger: CACATCCTCTAAATGGGCGCAATTTGTCCTGCCACC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCGACTCTCTGAGGGCTaGGATTTTTCCTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQRLSEG*DFSCKK
Trigger: CTTTTTGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376931.6
ENST00000640658.1
CDS-3UTR GCA 90 bp GCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAACCTTCTGCTAAATTaGATGACCAGGCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: ASDRKDKKPGWEDGLSAGNLLLN*MTRLSK
Trigger: TTTGGAAAGCCTGGTCATGCAATTTAGCAGAAGGTT...ACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATGGCCTGCGCCCCACTTaGTTTCTGTTTTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: VDLTFGHGVYNQHQSLHHGLRPT*FLFCRT
Trigger: AGTCCTACAAAACAGAAAGCAAGTGGGGCGCAGGCC...ATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp TCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAATCCCAGCTGTGGCATaGTGGGACTCCCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SETCPCSRFNFWTWRLQSIPAVA*WDSLEG
Trigger: CCCTTCCAGGGAGTCCCAGCATGCCACAGCTGGGAT...TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGACCCTAAGTGAAGAGTaGCTCACATACAAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQTLSEE*LTYKSP
Trigger: TGGACTCTTGTATGTGAGGCACTCTTCACTTAGGGT...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CTGGTCATTCTTCTAGGATTTGGAGATTCAAAGCCACTTACTTACCCAGGATCAGCAAACCCTGCACTCTaGAGCACTGGATATGCGGTG +
Preference number: 4 (lower is better)
Translates to: LVILLGFGDSKPLTYPGSANPAL*STGYAV
Trigger: CACCGCATATCCAGTGCTGCAGAGTGCAGGGTTTGC...TGATCCTGGGTAAGTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTTCAATCTATTTCAATaGCCCATCATCTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: RASAMLVSLRAASWSLHHFNLFQ*PIISCM
Trigger: CATGCAAGAGATGATGGGGCATTGAAATAGATTGAA...GTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp TTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACATTGGTTCCACATCTTTaGAATTGTGAGTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FTFPACWCPTFSSSLALTLVPHL*NCELCC
Trigger: GCAGCACAACTCACAATTGCAAAGATGTGGAACCAA...TGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGAGGCCTTGGTTCCACATCTTTaGAATTGTGAGTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LILDKVSLGVVSRQAGEALVPHL*NCELCC
Trigger: GCAGCACAACTCACAATTGCAAAGATGTGGAACCAA...GGCCTCCCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp AATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTTTAACTTTTGGACATaGCGTCTACAATCAGCACCA +
Preference number: 4 (lower is better)
Translates to: NCRSLYGPVSLPSSRIRGFNFWT*RLQSAP
Trigger: TGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAA...ACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAGTTTAACTTTTGGACATaGCGTCTACAATCAGCACCA +
Preference number: 4 (lower is better)
Translates to: DMASTISTRAFTISLVSQFNFWT*RLQSAP
Trigger: TGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAA...CTGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp GTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: VSVRASFSAFFQDQGLGCSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...GCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: DGAPAPLPFSRQVLTEAGSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...CCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp GGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTCCTTCCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: GSSILDEGCLLKHTPVPSSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GGAAGGAACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR CCA 90 bp AGATTCAAAGCCACTTACTTACCCAGGATCACAAAACTAGTTGGCGGCAACATCCCTCTGAAGAGACCTTaGCTGCTCACTGTCCACATG +
Preference number: 4 (lower is better)
Translates to: RFKATYLPRITKLVGGNIPLKRP*LLTVHM
Trigger: CATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGG...GATGTTGCCGCCAACTAGTTTTGTGATCCTGGGTAAGTAAGTGGCTTTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp GTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCTCCTTGCAGCAGGGCTaGGCCTGCGAGACCCAAGGC +
Preference number: 4 (lower is better)
Translates to: VDYFLLQTWYTLILDKVSSLQQG*ACETQG
Trigger: GCCTTGGGTCTCGCAGGCCCAGCCCTGCTGCAAGGA...GCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAAATAATCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp GTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATCAGGAGCTCCGTGTCTaGGGAACTCTGCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: VDLTFGHGVYNQHQSLHHQELRV*GTLQKG
Trigger: TCCTTTTTGCAGAGTTCCCCAGACACGGAGCTCCTG...ATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR CCA 90 bp CCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTCTCTTCCAGTTGGCTTaGAATGAGATTCTATGGACT +
Preference number: 4 (lower is better)
Translates to: PACWCPTFSSSLALTVSSLFQLA*NEILWT
Trigger: AGTCCATAGAATCTCATTCCAAGCCAACTGGAAGAG...AGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
CDS-3UTR CCA 90 bp AGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCACAGGAGCTCCGTGTCTaGGGAACTCTGTTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SRFNFWTWRLQSAPEPSPQELRV*GTLFER
Trigger: TCTCTCAAACAGAGTTCCCCAGACACGGAGCTCCTG...TGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR TCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000639632.2
ENST00000640320.1
CDS-3UTR TCA 90 bp TCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: SSLALTVSSRDLSGSSETFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...AGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR TCA 90 bp GTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGCCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: VPVVDLTFGHGVYNQHQSLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...GCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
CDS-3UTR TCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR TCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp TCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: SLRAASWSLHHCSSLISKLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...TTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR TCA 90 bp CTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: LTVSSRDLSGSSETCPCSLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...ACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCTCACTGTCCACATGTaGACTTTTTCTAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITLTVHM*TFSRWQ
Trigger: CTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGGAGCATGAAACACAATaGTACCATTACAACATGCAG +
Preference number: 4 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQEHETQ*YHYNMQ
Trigger: CTGCATGTTGTAATGGTATCATTGTGTTTCATGCTC...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTCCAGTTGGCTTGGAATaGGATTCTATGGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSPVGLE*DSMDLE
Trigger: CTCCAAGTCCATAGAATCTCATTCCAAGCCAACTGG...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR TCA 90 bp ACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGACCAGTTGGCTTGGAATaGGATTCTATGGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: TVSSRDLSGSSETCPCSRPVGLE*DSMDLE
Trigger: CTCCAAGTCCATAGAATCTCATTCCAAGCCAACTGG...TCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR TCA 90 bp CTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGCAGAGAATCTGACTaGACAGTCTGCAAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: LTVSSRDLSGSSETCPCSSRESD*TVCKKD
Trigger: GTCCTTTTTGCAGACTGTTCAGTCAGATTCTCTGCT...ACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
CDS-3UTR GCA 90 bp GCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACTGCGATTTTTCCTGCTaGTTCACATTCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: AALKLVPVVDLTFGHGVYCDFSC*FTFPAC
Trigger: GCAGGCTGGGAATGTGAAGCAGCAGGAAAAATCGCA...GTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATCTCGATTAATAACCTaGCAGTCCCAGATCACACAT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPSRLIT*QSQITH
Trigger: ATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTCTCGATTAATAACCTaGCAGTCCCAGATCACACAT +
Preference number: 4 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQSRLIT*QSQITH
Trigger: ATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGA...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGGAATCAGGTTACCGGTaGCTACAAAAGAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQESGYR*LQKNFE
Trigger: CTCAAAATTCTTTTGTAGGCACCGGTAACCTGATTC...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGAACCTTCTGCTAAATTaGATGACCAGGCTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQNLLLN*MTRLSK
Trigger: TTTGGAAAGCCTGGTCATGCAATTTAGCAGAAGGTT...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp AGATTCAAAGCCACTTACTTACCCAGGATCACAAAACTAGTTGGCGGCAACATCATCGTCAGGTTGACCTaGTGGCCAACCTCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: RFKATYLPRITKLVGGNIIVRLT*WPTSVS
Trigger: AGAAACTGAGGTTGGCCAGCAGGTCAACCTGACGAT...GATGTTGCCGCCAACTAGTTTTGTGATCCTGGGTAAGTAAGTGGCTTTGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGTGTCTGGGGAACTCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSVSGEL*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGAGTTCCCCAGACAC...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000522663.5
ENST00000639381.1
ENST00000639837.1
CDS-3UTR GCA 90 bp TTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACATGCAATTGTGAGTTGTaGTGCTCCAGATATCATCTT +
Preference number: 4 (lower is better)
Translates to: FTFPACWCPTFSSSLALTCNCEL*CSRYHL
Trigger: AAGATGATATCTGGAGCAGCACAACTCACAATTGCA...TGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp CCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTTGCAATTGTGAGTTGTaGTGCTCCAGATATCATCTT +
Preference number: 4 (lower is better)
Translates to: PACWCPTFSSSLALTVSSCNCEL*CSRYHL
Trigger: AAGATGATATCTGGAGCAGCACAACTCACAATTGCA...AGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp CAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: QWSLGPERNCLSLTFWGPSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...GGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR CCA 90 bp GTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VSSRDLSGSSETCPCSRFTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...AAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
CDS-3UTR CCA 90 bp TGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CPCSRFNFWTWRLQSAPETFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...CTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
CDS-3UTR CCA 90 bp AGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGSSETCPCSRFNFWTWRTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...ACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
CDS-3UTR CCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp TGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: WCPTFSSSLALTVSSRDLSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...CAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTTCTGACACTTTCTGCTaGAAGCTGTCAGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: CISINNLPVPDHTSSSKSSDTFC*KLSGWD
Trigger: GTCCCAGCCTGACAGCTTCCAGCAGAAAGTGTCAGA...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACAACGCTCAGTGGTCACTaGGACCAGAGAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTTLSGH*DQRETV
Trigger: AACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGT...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000519208.5
ENST00000639865.1
ENST00000640320.1
CDS-3UTR CCA 90 bp CTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCCTGAGAGCTGCCTCCTaGTCTCTTCACCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: LLQTWYTLILDKVSLGVVLRAAS*SLHHCS
Trigger: ACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAG...GACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp TTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTTTTCTGCTACAGACCTaGTACACTCTGATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: FLLGLRRLTKGIRNVGFTFLLQT*YTLILD
Trigger: ATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAA...AGTGAAACCAACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp CCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCCTCAGCTCTTCCAGTTaGCTTGGAATGAGATTCTAT +
Preference number: 4 (lower is better)
Translates to: PTFSSSLALTVSSRDLSGLSSSS*LGMRFY
Trigger: ATAGAATCTCATTCCAAGCCAACTGGAAGAGCTGAG...GCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp TGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGGTGAAAAAGACTGCTTaGCCCTTTACAGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: WCPTFSSSLALTVSSRDLVKKTA*PFTGKA
Trigger: TGCTTTCCCTGTAAAGGGCCAAGCAGTCTTTTTCAC...CAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
3UTR CAA 72 bp CTGCTGGAAGCTGTCAGGCTGGGACAGGCTTTGATTTaGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLEAVRLGQALI*RVSKTKQINAF
Trigger: GAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCTGACAGCTTCCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGCTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: VPVVDLTFGHGVYNQHQSFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...GCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
CDS-3UTR TCA 90 bp GCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: AALKLVPVVDLTFGHGVYLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...GTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR TCA 90 bp ACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGACTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: TVSSRDLSGSSETCPCSRLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...TCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
CDS-3UTR TCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACACTCACTGTCCACATGTaGACTTTTTCTAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTLTVHM*TFSRWQ
Trigger: CTGCCACCTAGAAAAAGTTCACATGTGGACAGTGAG...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCAGACAACACCCTAAGTaGAGAGTGCCTCACATACAA +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITRQHPK*RVPHIQ
Trigger: TTGTATGTGAGGCACTCTTCACTTAGGGTGTTGTCT...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTAGATGGAGGCTGCTATaGGGTGTGATTGTACCATTG +
Preference number: 4 (lower is better)
Translates to: LRVSKTKQINAFHLTANLRWRLL*GVIVPL
Trigger: CAATGGTACAATCACACCTCATAGCAGCCTCCATCT...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACCCAGTTGGCTTGGAATaGGATTCTATGGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSRDLSGSSETCPCSRFNPVGLE*DSMDLE
Trigger: CTCCAAGTCCATAGAATCTCATTCCAAGCCAACTGG...GTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR TCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTAGCAGAGAATCTGACTaGACAGTCTGCAAAAAGGAC +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSSRESD*TVCKKD
Trigger: GTCCTTTTTGCAGACTGTTCAGTCAGATTCTCTGCT...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
CDS-3UTR TCA 90 bp TGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGTTGGAGCAGAGAATCTaGCTGAACAGTCTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: WCPTFSSSLALTVSSRDLLEQRI*LNSLQK
Trigger: TTTTTGCAGACTGTTCAGTCAGATTCTCTGCTCCAA...CAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523835.5
ENST00000638405.1
CDS-3UTR TCA 90 bp TGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACGTTCCTTTTTGTGGCTaGGTAGTATTCCATGGTGTA +
Preference number: 4 (lower is better)
Translates to: CWCPTFSSSLALTVSSRDVPFCG*VVFHGV
Trigger: TACACCATGGAATACTACTCAGCCACAAAAAGGAAC...GTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp CTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCTGGGGAACTCTGTTTaGGAGAGGATGATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LKLVPVVDLTFGHGVYNQLGNSV*ERMIPA
Trigger: AGCTGGGATCATCCTCTCTCAAACAGAGTTCCCCAG...CTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp AAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCGACTCTCTGAGGGCTaGGATTTTTCCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KLVPVVDLTFGHGVYNQHRLSEG*DFSCCF
Trigger: GAAGCAGCAGGAAAAATCGCAGCCCTCAGAGAGTCG...GTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCTCGATTAATAACCTaGCAGTCCCAGATCACACAT +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQSRLIT*QSQITH
Trigger: ATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp AGTTGGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGGAATCAGGTTACCGGTaGCTACAAAAGAATTTTGAG +
Preference number: 4 (lower is better)
Translates to: SWLQTEKTRNPGGKMGFLESGYR*LQKNFE
Trigger: CTCAAAATTCTTTTGTAGGCACCGGTAACCTGATTC...CAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTCTCCAAGGGTCACAATaGTCTTTGGTCCTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: LRVSKTKQINAFHLTANLLQGSQ*SLVLSY
Trigger: GTAACTCAGGACCAAAGAGCATTGTGACCCTTGGAG...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATTTCTTCTAGAGACCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPFLLET*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGGTCTCTAGAAGAAA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523084.5
ENST00000639933.1
CDS-3UTR GCA 90 bp GGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTTTCAATCTATTTCAATaGCCCATCATCTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: GPGSSILDEGCLLKHTPVFNLFQ*PIISCM
Trigger: CATGCAAGAGATGATGGGGCATTGAAATAGATTGAA...AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp GGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTGGTAAGCCAAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: GHGVYNQHQSLHHKPGKPSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...TGGCTTACCAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp CTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: LLHIPSLLVSHVFFFTGTSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...AGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CCA 90 bp AACTGTGACAAAAGACAGAATTATCACACACACGCTCAGTGGTCACTGGGACCATCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: NCDKRQNYHTHAQWSLGPSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...TGGTCCCAGTGACCACTGAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CCA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: CELFLGGRTNCAHLEDVASSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CCA 90 bp AGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGGCTGCTTTCTGCTACAGACCTaGTACACTCTGATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: SSWESFSRYFSQRLSEGCFLLQT*YTLILD
Trigger: ATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAA...GCAGCCCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTAAAATTAACCTGGCGTaGTGGCACGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: CISINNLPVPDHTSSSKSKINLA*WHAPVI
Trigger: GATTACAGGCGCGTGCCACCACGCCAGGTTAATTTT...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTATTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: GSSETCPCSRFNFWTWRLFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...TAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
CDS-3UTR TCA 90 bp AGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTTTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: SGSSETCPCSRFNFWTWRFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...ACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
CDS-3UTR TCA 90 bp TCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: SRDLSGSSETCPCSRFNFLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...AAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
CDS-3UTR TCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACACTCCTCCATTTTGGATaGAGGCTGTTTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTLLHFG*RLFAET
Trigger: TGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAG...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000519208.5
ENST00000639865.1
ENST00000640320.1
CDS-3UTR TCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACAACAAAGCAACAGGCTTaGGGGAGCATGAAACACAAT +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTTKQQA*GSMKHN
Trigger: ATTGTGTTTCATGCTCCCTCAAGCCTGTTGCTTTGT...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGTTGGAGCAGAGAATCTaGCTGAACAGTCTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CPCSRFNFWTWRLQSAPELEQRI*LNSLSR
Trigger: TCTGGAAAGACTGTTCAGTCAGATTCTCTGCTCCAA...CTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR TCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTACATCTTTGCAATTGTaGGTTGTGCTGCTCCAGATA +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSTSLQL*VVLLQI
Trigger: TATCTGGAGCAGCACAACTCACAATTGCAAAGATGT...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR TCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGTTCCTTTTTGTGGCTaGGTAGTATTCCATGGTGTA +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSVPFCG*VVFHGV
Trigger: TACACCATGGAATACTACTCAGCCACAAAAAGGAAC...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR GCA 90 bp GTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCACGGAGGCTGGACGGTaGTCCTGCTCCACTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VDYFLLQTWYTLILDKVSTEAGR*SCSTSF
Trigger: AAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGT...GCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAAATAATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTCTCGATTAATAACCTaGCAGTCCCAGATCACACAT +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITSRLIT*QSQITH
Trigger: ATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGA...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR GCA 90 bp CTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCGCCCAGCACATAGCTTaGCTAATGGCTTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: LLQTWYTLILDKVSLGVVAQHIA*LMAFTF
Trigger: GAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGC...GACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp CTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGAGCCTTTCCAGATTCTaGTCCATCCATTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: LSGSSETCPCSRFNFWTWSLSRF*SIHFTS
Trigger: GGAAGTGAAATGGATGGAGCAGAATCTGGAAAGGCT...CCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp GACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACAAGCCTTTCCAGATTCTaGTCCATCCATTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: DLSGSSETCPCSRFNFWTSLSRF*SIHFTS
Trigger: GGAAGTGAAATGGATGGAGCAGAATCTGGAAAGGCT...TGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR CCA 90 bp CTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LKLVPVVDLTFGHGVYNQTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...CTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639532.1
CDS-3UTR CCA 90 bp ACTTCGTCAACTGTGACAAAAGACAGAATTATCACACACACGCTCAGTGGTCACTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: TSSTVTKDRIITHTLSGHSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GTGACCACTGAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR TCA 90 bp AAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCTTCTTCACTGGCACTaGCAGTTTCTTCTAGAGACC +
Preference number: 4 (lower is better)
Translates to: KLVPVVDLTFGHGVYNQHLLHWH*QFLLET
Trigger: GGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAG...GTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
CDS-3UTR TCA 90 bp CTGGTCATTCTTCTAGGATTTGGAGATTCAAAGCCACTTACTTACCCAGGATCAAGACAACACCCTAAGTaGAGAGTGCCTCACATACAA +
Preference number: 4 (lower is better)
Translates to: LVILLGFGDSKPLTYPGSRQHPK*RVPHIQ
Trigger: TTGTATGTGAGGCACTCTTCACTTAGGGTGTTGTCT...TGATCCTGGGTAAGTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATGACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACAAGGCTTGAGGGAGCATaGAACACAATGATACCATTA +
Preference number: 4 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTRLEGA*NTMIPL
Trigger: TAATGGTATCATTGTGTTTCATGCTCCCTCAAGCCT...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTAGGCTTGAGGGAGCATaGAACACAATGATACCATTA +
Preference number: 4 (lower is better)
Translates to: LRVSKTKQINAFHLTANLRLEGA*NTMIPL
Trigger: TAATGGTATCATTGTGTTTCATGCTCCCTCAAGCCT...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp GGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTAAGCAGAGAATCTGACTaGACAGTCTTTCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: GSSETCPCSRFNFWTWRLSRESD*TVFPDS
Trigger: AGAATCTGGAAAGACTGTTCAGTCAGATTCTCTGCT...TAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR TCA 90 bp GCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCCAGTTGGCTTGGAATaGGATTCTATGGACTTGGAG +
Preference number: 4 (lower is better)
Translates to: ALKLVPVVDLTFGHGVYNPVGLE*DSMDLE
Trigger: CTCCAAGTCCATAGAATCTCATTCCAAGCCAACTGG...ATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR GCA 90 bp CTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGTTTGTAGGACTCACCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSGSSETCPCSRFNFWTWFVGLT*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGGTGAGTCCTACAAA...CCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR CCA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTTTAACTTTTGGACATaGCGTCTACAATCAGCACCA +
Preference number: 4 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITFNFWT*RLQSAP
Trigger: TGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAA...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000639632.2
ENST00000640320.1
CDS-3UTR CCA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: GNPVPPNKCISINNLPVPSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000639632.2
ENST00000640320.1
CDS-3UTR CCA 90 bp GACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAAGCCTTTCCAGATTCAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: DMASTISTRAFTISLSRFSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...GAATCTGGAAAGGCTTATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR CCA 90 bp GCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: ACWCPTFSSSLALTVSSRSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...TCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CCA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: ASWSLHHCSSLISKPSAASRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp CCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: PTFSSSLALTVSSRDLSGSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...GCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CCA 90 bp CTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCTCCAGCTCCAGTTCTTaGGAGTCCTTTTCTAGATAC +
Preference number: 4 (lower is better)
Translates to: LLQTWYTLILDKVSLGVVSSSSS*ESFSRY
Trigger: GTATCTAGAAAAGGACTCCCAAGAACTGGAGCTGGA...GACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp TCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACCTCTTCCAGTTGGCTTaGAATGAGATTCTATGGACT +
Preference number: 4 (lower is better)
Translates to: SSRDLSGSSETCPCSRFNLFQLA*NEILWT
Trigger: AGTCCATAGAATCTCATTCCAAGCCAACTGGAAGAG...GTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR TCA 90 bp AGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATTTCTTCTAGAGACCTaGGTGGCAGCTCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: SSETCPCSRFNFWTWRLQFLLET*VAALKL
Trigger: AAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAA...TTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
CDS-3UTR TCA 90 bp AACTGTGACAAAAGACAGAATTATCACACACACGCTCAGTGGTCACTGGGACCAACACTTCGTCAACTGTaGCAAAAGACAGAATTATCA +
Preference number: 4 (lower is better)
Translates to: NCDKRQNYHTHAQWSLGPTLRQL*QKTELS
Trigger: TGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGT...TGGTCCCAGTGACCACTGAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR TCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTGAGCATGAAACACAATaGTACCATTACAACATGCAG +
Preference number: 4 (lower is better)
Translates to: LRVSKTKQINAFHLTANLEHETQ*YHYNMQ
Trigger: CTGCATGTTGTAATGGTATCATTGTGTTTCATGCTC...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTTCTCGATTAATAACCTaGCAGTCCCAGATCACACAT +
Preference number: 4 (lower is better)
Translates to: CISINNLPVPDHTSSSKSSRLIT*QSQITH
Trigger: ATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGA...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp CTGGTCATTCTTCTAGGATTTGGAGATTCAAAGCCACTTACTTACCCAGGATCAACAGTTGGGTTGTGCTaGTTACAAAGGGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LVILLGFGDSKPLTYPGSTVGLC*LQREKQ
Trigger: TTGCTTTTCCCTTTGTAAGCAGCACAACCCAACTGT...TGATCCTGGGTAAGTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000292586.11
ENST00000518219.5
ENST00000639632.2
ENST00000640320.1
CDS-3UTR CCA 90 bp TGTGAACTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTCATTCTTCTAGGATTTaGAGATTCAAAGCCACTTAC +
Preference number: 4 (lower is better)
Translates to: CELFLGGRTNCAHLEDVAHSSRI*RFKATY
Trigger: GTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATG...AGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAGTTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTGGAATGAGATTCTATaGACTTGGAGCAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: SSRDLSGSSETCPCSRFNWNEIL*TWSRES
Trigger: AGATTCTCTGCTCCAAGTCCATAGAATCTCATTCCA...GTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp GACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGAATGAGATTCTATaGACTTGGAGCAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: DLSGSSETCPCSRFNFWTWNEIL*TWSRES
Trigger: AGATTCTCTGCTCCAAGTCCATAGAATCTCATTCCA...TGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR GCA 90 bp GCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATTTTGTAGGACTCACCTaGAAAAAGGACTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ALKLVPVVDLTFGHGVYNFVGLT*KKDCFS
Trigger: AGAGAAGCAGTCCTTTTTGCAGGTGAGTCCTACAAA...ATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR GCA 90 bp AAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACAGTCTTTCCAGATTCTaGTCCATCCATTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: KLVPVVDLTFGHGVYNQHSLSRF*SIHFTS
Trigger: GGAAGTGAAATGGATGGAGCAGAATCTGGAAAGACT...GTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR CCA 90 bp TTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: FSSSLALTVSSRDLSGSSSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...AGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000522663.5
ENST00000523835.5
ENST00000524068.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CCA 90 bp GTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCACATTCCCAGCCTGCTaGTGTCCCACGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VDYFLLQTWYTLILDKVSTFPAC*CPTFSS
Trigger: AGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGT...GCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAAATAATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTCATTCTTCTAGGATTTaGAGATTCAAAGCCACTTAC +
Preference number: 4 (lower is better)
Translates to: LRVSKTKQINAFHLTANLHSSRI*RFKATY
Trigger: GTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATG...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp CTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCTCTTCCAGTTGGCTTaGAATGAGATTCTATGGACT +
Preference number: 4 (lower is better)
Translates to: LKLVPVVDLTFGHGVYNQLFQLA*NEILWT
Trigger: AGTCCATAGAATCTCATTCCAAGCCAACTGGAAGAG...CTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp AAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCTCAGCTCTTCCAGTTaGCTTGGAATGAGATTCTAT +
Preference number: 4 (lower is better)
Translates to: KLVPVVDLTFGHGVYNQHLSSSS*LGMRFY
Trigger: ATAGAATCTCATTCCAAGCCAACTGGAAGAGCTGAG...GTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CCA 90 bp GCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCTCAGCTCTTCCAGTTaGCTTGGAATGAGATTCTAT +
Preference number: 4 (lower is better)
Translates to: ALKLVPVVDLTFGHGVYNLSSSS*LGMRFY
Trigger: ATAGAATCTCATTCCAAGCCAACTGGAAGAGCTGAG...ATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR TCA 90 bp CTGGTCATTCTTCTAGGATTTGGAGATTCAAAGCCACTTACTTACCCAGGATCAACACTTCGTCAACTGTaGCAAAAGACAGAATTATCA +
Preference number: 4 (lower is better)
Translates to: LVILLGFGDSKPLTYPGSTLRQL*QKTELS
Trigger: TGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGT...TGATCCTGGGTAAGTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR TCA 90 bp TGTATCTCGATTAATAACCTGCCAGTCCCAGATCACACATCATCATCGAAGTCTACACTTCGTCAACTGTaGCAAAAGACAGAATTATCA +
Preference number: 4 (lower is better)
Translates to: CISINNLPVPDHTSSSKSTLRQL*QKTELS
Trigger: TGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGT...AGACTTCGATGATGATGTGTGATCTGGGACTGGCAGGTTATTAATCGAGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR GCA 90 bp GTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCGCCCAGCACATAGCTTaGCTAATGGCTTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: VDYFLLQTWYTLILDKVSAQHIA*LMAFTF
Trigger: GAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGC...GCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAAATAATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR GCA 90 bp TCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAAGTCTTTCCAGATTCTaGTCCATCCATTTCACTTCC +
Preference number: 4 (lower is better)
Translates to: SETCPCSRFNFWTWRLQSSLSRF*SIHFTS
Trigger: GGAAGTGAAATGGATGGAGCAGAATCTGGAAAGACT...TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR CCA 90 bp GTAGATTTAACTTTTGGACATGGCGTCTACAATCAGCACCAGAGCCTTCACCATAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: VDLTFGHGVYNQHQSLHHSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...ATGGTGAAGGCTCTGGTGCTGATTGTAGACGCCATGTCCAAAAGTTAAATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
CDS-3UTR CCA 90 bp TTGAGGGTTAGCAAGACAAAGCAAATAAATGCCTTCCACCTCACCGCAAACCTTAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: LRVSKTKQINAFHLTANLSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...AAGGTTTGCGGTGAGGTGGAAGGCATTTATTTGCTTTGTCTTGCTAACCCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CCA 90 bp TCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTAGTAGATTTAACTTTTaGACATGGCGTCTACAATCA +
Preference number: 4 (lower is better)
Translates to: SRDLSGSSETCPCSRFNFSRFNF*TWRLQS
Trigger: TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACT...AAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000519213.1
ENST00000522157.5
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
ENST00000639532.1
CDS-3UTR CCA 90 bp TCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCATGGAATGAGATTCTATaGACTTGGAGCAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: SETCPCSRFNFWTWRLQSWNEIL*TWSRES
Trigger: AGATTCTCTGCTCCAAGTCCATAGAATCTCATTCCA...TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CAA 90 bp CCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PFWGPQATSEPPESCTPRRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...CCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR CAA 90 bp AGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RATRVLHATAARRLDGAPRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...AGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp AGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTCTGGGGAGGCCAGTGTaGTGGGCTTCCTGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: RATRVLHATAARRLDGAPLGRPV*WASCWD
Trigger: GTCCCAGCAGGAAGCCCACAACACTGGCCTCCCCAG...AGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS TCA 90 bp GCCTGGAAGAGGCGGCAGCTGCAGCAGCGTAGCACCCGAGAACGCTaGAGCGACGCCATCCCTGCTTGTGCAGTCGCCAGGCAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: AWKRRQLQQRSTRER*SDAIPACAVARQPS
Trigger: GCTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTTCAGCGTTCTCGGGTGCTACGCTGCTGCAGCTGCCGCCTCTTCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000519208.5
ENST00000519213.1
ENST00000520150.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523084.5
ENST00000523737.5
ENST00000639215.1
ENST00000639381.1
ENST00000639837.1
ENST00000639865.1
ENST00000639933.1
ENST00000640189.1
ENST00000640912.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PFWGPQATSEPPESCTPRFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...CCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR CAA 90 bp CCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PQSHPSPARHGCTEAGRCFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...GCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: PQSHPSPARHGCTEAGRCAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...GCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS GCA 90 bp GGCCAGCAGTGGCAGCAGCTGCCCGATTTCCCACCTGCTGGCACTTaGCACCTAGGCTTCCCGCGCTTGGCTGACGCTCACAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GQQWQQLPDFPPAGT*HLGFPRLADAHSGS
Trigger: TGAGCCACTGTGAGCGTCAGCCAAGCGCGGGAAGCCTAGGTGGCAAGTGCCAGCAGGTGGGAAATCGGGCAGCTGCTGCCACTGCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521675.1
ENST00000639025.1
CDS-3UTR CAA 90 bp TCCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLLGSPGDLRATRVLHATFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...CGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR CAA 90 bp AGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGCTCTGGGGGTCCCTaGCTTAGCCTGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: SSPALQSAEFSWRQGLLPCSGGP*LSLCWT
Trigger: GGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGCA...AGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CAA 90 bp CAGGGCTGGGCCTGCGAGACCCAAGGCTCACTGCAGCGCGCTCCTGACCCCTCCAGGGCATCCGCAATGTaGGTTTCACTGAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: QGWACETQGSLQRAPDPSRASAM*VSLRAA
Trigger: GGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT...GGAGGGGTCAGGAGCGCGCTGCAGTGAGCCTTGGGTCTCGCAGGCCCAGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp TCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: SGVPRRPQSHPSPARHGCPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...GCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp TCCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGCCCTCTGAAGAGACCTaGGCTGCTCACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: SLLGSPGDLRATRVLHATPSEET*AAHCPH
Trigger: ATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGG...CGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CAA 90 bp AGTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGTGCTCTGGGGGTCCCTaGCTTAGCCTGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: SALCVVQGQRRPTLADVGCSGGP*LSLCWT
Trigger: GGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGCA...CCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp CAATCCCAGTTGACTGGACCAGAGGTGGGCATCCGAGTCAGCCTGGGCCAACCACGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: QSQLTGPEVGIRVSLGQPRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...TGGTTGGCCCAGGCTGACTCGGATGCCCACCTCTGGTCCAGTCAACTGGGATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR CAA 90 bp GCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: AARRLDGAPAPLPFSRQVRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...GACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp ACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: TAARRLDGAPAPLPFSRQRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...CTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp GCCTGTCCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGAGGGCATCCGCAATGTaGGTTTCACTGAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: ACPFWGPQATSEPPESCTRASAM*VSLRAA
Trigger: GGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT...CGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGGACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp CTCCTGACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTCTGGGGAGGCCAGTGTaGTGGGCTTCCTGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LLTPPCRGYVSSPAHSLPLGRPV*WASCWD
Trigger: GTCCCAGCAGGAAGCCCACAACACTGGCCTCCCCAG...AGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp AGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: RATRVLHATAARRLDGAPPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...AGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CCCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGAGGTGGCAGGACAAATaGCGCCCATTTAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: PFWGPQATSEPPESCTPRRWQDK*RPFRGC
Trigger: ACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCT...CCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CAA 90 bp CGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCCTCTGAAGAGACCTaGGCTGCTCACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: RVLHATAARRLDGAPAPLPSEET*AAHCPH
Trigger: ATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGG...AAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CAA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACGTCGCAGTGGCAGAGTaGAGCAGTGTGAAAAAGACT +
Preference number: 5 (lower is better)
Translates to: PESCTPRLHGGWTVLLLHVAVAE*SSVKKT
Trigger: AGTCTTTTTCACACTGCTCAACTCTGCCACTGCGAC...GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp TTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LSLTFWGPQATSEPPESCFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...GCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CAA 90 bp GGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCACGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GPERNCLSLTFWGPQATSRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LPAGATLAAQHIACLMAFRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...GAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp GACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGCCAGAGAGAAACTGTTaGTCACTGACCTTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: DLLGSPGDLRATRVLHATPERNC*SLTFWG
Trigger: ACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGG...CGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACAGCCCAGCACATAGCTaGCCTAATGGCTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: PESCTPRLHGGWTVLLLHSPAHS*PNGFHF
Trigger: AAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCT...GTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS GCA 90 bp CCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTaGCTTGTTTCACCTTCCATGTCAGGCCAGCTCCAGTTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: PRHCSLQSSPGGRGC*LVSPSMSGQLQFLG
Trigger: TCCCAAGAACTGGAGCTGGCCTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523267.1
ENST00000639686.1
CDS-3UTR CAA 90 bp CTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCATTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LGSPGDLRATRVLHATAALDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...TGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CCTCAGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: PQSHPSPARHGCTEAGRCLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...GCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000519208.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp GCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: APRHCSLQSSPGGRGCCLPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...AAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CAA 90 bp CTCCTGACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LLTPPCRGYVSSPAHSLPFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...AGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGTCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp TCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTCCCTCTGAAGAGACCTaGGCTGCTCACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: SPALQSAEFSWRQGLLPCPSEET*AAHCPH
Trigger: ATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGG...ACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CAA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGTGCTCTGGGGGTCCCTaGCTTAGCCTGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWCSGGP*LSLCWT
Trigger: GGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGCA...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CAA 90 bp CTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCCTGGGGAGGCCAGTGTaGTGGGCTTCCTGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LPAGATLAAQHIACLMAFLGRPV*WASCWD
Trigger: GTCCCAGCAGGAAGCCCACAACACTGGCCTCCCCAG...GAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp TCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTAGGTGGCAGGACAAATaGCGCCCATTTAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: SCTPRLHGGWTVLLLHFLRWQDK*RPFRGC
Trigger: ACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCT...AAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521299.5
ENST00000640189.1
CDS-3UTR CAA 90 bp CTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGCTCCTCCATTTTCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LPFSRQVLTEAGAWLLHFRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...AAAATGGAGGAGCCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp GGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGCTGGGGAGGCCAGTGTaGTGGGCTTCCTGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GIRNVGFTESCLLVSSPLLGRPV*WASCWD
Trigger: GTCCCAGCAGGAAGCCCACAACACTGGCCTCCCCAG...CAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS TCA 90 bp ACCATGTGGGGTGTCTGCCTACCTGGTAAGCCAGCCCCTCTCTTCTaGGACCCAATCCCAGTTGACTGGACCAGAGGTGGGCATCCGAGT +
Preference number: 5 (lower is better)
Translates to: TMWGVCLPGKPAPLF*DPIPVDWTRGGHPS
Trigger: ACTCGGATGCCCACCTCTGGTCCAGTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGGCTTACCAGGTAGGCAGACACCCCACATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517338.1
ENST00000638169.1
CDS-3UTR CAA 90 bp CTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LGPERNCLSLTFWGPQATFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...GGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LHGGWTVLLLHFLFLGRSFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...AGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp ACCCTGCACTCTGCAGCACTGGATATGCGGTGGGGCCTGCTGGACTGGAAGCTTCCCTCTGAAGAGACCTaGGCTGCTCACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: TLHSAALDMRWGLLDWKLPSEET*AAHCPH
Trigger: ATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGG...AAGCTTCCAGTCCAGCAGGCCCCACCGCATATCCAGTGCTGCAGAGTGCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTCTGCCCAGGGAGTCCTaGCGTCCCATGAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLLPRES*RPMRSS
Trigger: GGAAGACCTCATGGGACGCAAGGACTCCCTGGGCAG...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGCTGCCCAGGGAGTCCTaGCGTCCCATGAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GFRQKRQETRVGRWAFCGLPRES*RPMRSS
Trigger: GGAAGACCTCATGGGACGCAAGGACTCCCTGGGCAG...CCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp TCCCCGGCACTGCAGTCTGCAGAGTTCTCCTGGAGGCAGGGGCTGCTGCCTTGTCCAGAGAGAAACTGTTaGTCACTGACCTTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SPALQSAEFSWRQGLLPCPERNC*SLTFWG
Trigger: ACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGG...ACAAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp AAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTGTGGTCCCAGCTACTaGGCGGCTGAGGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KTRNPGGKMGFLRVGIAHCGPSY*AAEAGG
Trigger: TCCTCCTGCCTCAGCCGCCAAGTAGCTGGGACCACA...GTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GTGTGTGGCCCGAGGAAGCTGGACAGCGGCAGTGGGCCTGCTGAGGCCTTCTCTTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: VCGPRKLDSGSGPAEAFSLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...AGAGAAGGCCTCAGCAGGCCCACTGCCGCTGTCCAGCTTCCTCGGGCCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CAA 90 bp GTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: VVGFLLGLRRLTKGIRNVAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...AACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGCCCACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523084.5
ENST00000639933.1
CDS-3UTR CAA 90 bp GGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTCCTTCCCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GSSILDEGCLLKHTPVPSRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...GGAAGGAACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp TGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCCGAGTCCCCAGAGAGAAACTGTTaGTCACTGACCTTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: CLSLTFWGPQATSEPPESPERNC*SLTFWG
Trigger: ACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGG...GGACTCGGGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CAA 90 bp TTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGACTGGGGAGGCCAGTGTaGTGGGCTTCCTGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LRRIAGLCTGQFLCLLPGLGRPV*WASCWD
Trigger: GTCCCAGCAGGAAGCCCACAACACTGGCCTCCCCAG...TCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp AGAGCCACCCGAGTCCTGCACGCCACGGCTGCACGGAGGCTGGACGGTGCTCCTCCTCCAAAATGTATCTaGTATCCATTCATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: RATRVLHATAARRLDGAPPPKCI*YPFISL
Trigger: GAGAGAGATGAATGGATACAAGATACATTTTGGAGG...AGGAGCACCGTCCAGCCTCCGTGCAGCCGTGGCGTGCAGGACTCGGGTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp CTGGGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LGPERNCLSLTFWGPQATPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...GGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CAA 90 bp AGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RASAMLVSLRAASWSLHHFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...GTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp CTGAAGCGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: LKRGPGSSILDEGCLLKHAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...GTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCGCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000521299.5
ENST00000522663.5
ENST00000639837.1
ENST00000640189.1
CDS-3UTR CAA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGAAACCTTCTGCTAAATaGCATGACCAGGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGKPSAK*HDQAFQ
Trigger: TTGGAAAGCCTGGTCATGCAATTTAGCAGAAGGTTT...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523084.5
ENST00000639933.1
CDS-3UTR CAA 90 bp GTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTAGGGCATCCGCAATGTaGGTTTCACTGAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: VVGFLLGLRRLTKGIRNVRASAM*VSLRAA
Trigger: GGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT...AACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGCCCACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp GTGCTCTGTGCGTGGTGCAAGGCCAGCGGAGACCGACCTTGGCTGATGTGGGGGAAAACAACAGTTGGGTaGTGCTGCTTACAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: VLCAWCKASGDRPWLMWGKTTVG*CCLQRE
Trigger: TTCCCTTTGTAAGCAGCACAACCCAACTGTTGTTTT...CCCCCACATCAGCCAAGGTCGGTCTCCGCTGGCCTTGCACCACGCACAGAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GTGGGGGTGGGGGCAGTGACTGACGCCCAGTGGACTCCCAACTGCAGTGCCCTTAAAACAACAGTTGGGTaGTGCTGCTTACAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: VGVGAVTDAQWTPNCSALKTTVG*CCLQRE
Trigger: TTCCCTTTGTAAGCAGCACAACCCAACTGTTGTTTT...AAGGGCACTGCAGTTGGGAGTCCACTGGGCGTCAGTCACTGCCCCCACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCGTCGCAGTGGCAGAGTaGAGCAGTGTGAAAAAGACT +
Preference number: 5 (lower is better)
Translates to: AARRLDGAPAPLPFSRQVVAVAE*SSVKKT
Trigger: AGTCTTTTTCACACTGCTCAACTCTGCCACTGCGAC...GACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp CCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PCRGYVSSPAHSLPNGFHPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...GTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp GACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: DGAPAPLPFSRQVLTEAGPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...CCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTGCTCTGGGGGTCCCTaGCTTAGCCTGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQCSGGP*LSLCWT
Trigger: GGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGCA...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATGCTCTGGGGGTCCCTaGCTTAGCCTGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: GNPVPPNKCISINNLPVPCSGGP*LSLCWT
Trigger: GGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGCA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCTGCCCAGGGAGTCCTaGCGTCCCATGAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQLPRES*RPMRSS
Trigger: GGAAGACCTCATGGGACGCAAGGACTCCCTGGGCAG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACTGCCCAGGGAGTCCTaGCGTCCCATGAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: GNPVPPNKCISINNLPVPLPRES*RPMRSS
Trigger: GGAAGACCTCATGGGACGCAAGGACTCCCTGGGCAG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCCGACGCCATCCCTGCTaGTGCAGTCGCCAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: VAALKLVPVVDLTFGHGVRRHPC*CSRQAA
Trigger: GGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCG...GACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519213.1
ENST00000639381.1
CDS-3UTR CAA 90 bp GCTGCTTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACAGGGCATCCGCAATGTaGGTTTCACTGAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: AASHSQPAGVPRFLLHWHRASAM*VSLRAA
Trigger: GGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT...GTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp CAGTTGACTGGACCAGAGGTGGGCATCCGAGTCAGCCTGGGCCAACCAGGTTGCACTCAGCTCTTCCAGTaGGCTTGGAATGAGATTCTA +
Preference number: 5 (lower is better)
Translates to: QLTGPEVGIRVSLGQPGCTQLFQ*AWNEIL
Trigger: TAGAATCTCATTCCAAGCCAACTGGAAGAGCTGAGT...GCAACCTGGTTGGCCCAGGCTGACTCGGATGCCCACCTCTGGTCCAGTCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CAA 90 bp CCAATCCCAGTTGACTGGACCAGAGGTGGGCATCCGAGTCAGCCTGGGCCAACCACTCAGCTCTTCCAGTaGGCTTGGAATGAGATTCTA +
Preference number: 5 (lower is better)
Translates to: PIPVDWTRGGHPSQPGPTTQLFQ*AWNEIL
Trigger: TAGAATCTCATTCCAAGCCAACTGGAAGAGCTGAGT...GGTTGGCCCAGGCTGACTCGGATGCCCACCTCTGGTCCAGTCAACTGGGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CAA 90 bp GAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCAGAGCCACCTTCTCTCCACAAGCTTaGCATGTCCACTTGACACTC +
Preference number: 5 (lower is better)
Translates to: EKLFVTDLLGSPGDLRATFSPQA*HVHLTL
Trigger: GAGTGTCAAGTGGACATGCAAAGCTTGTGGAGAGAA...GGTGGCTCTGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CAA 90 bp ACCCCTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: TPPCRGYVSSPAHSLPNGLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...GCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp GCTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: AARRLDGAPAPLPFSRQVLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...GACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CTGAAGCGGGGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LKRGPGSSILDEGCLLKHPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...GTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCCCCGCTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR CAA 90 bp GGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GIRNVGFTESCLLVSSPLPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...CAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: REKQCESSDRVGPCSTATPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp AGGGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: RASAMLVSLRAASWSLHHPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...GTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp TTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LRRIAGLCTGQFLCLLPGFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...TCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp AGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCACTTTCTCGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: RGYVSSPAHSLPNGFHFLAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...GAGAAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTGCTCTGGGGGTCCCTaGCTTAGCCTGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQCSGGP*LSLCWT
Trigger: GGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGCA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGACCAGAGAGAAACTGTTTGTCACTGACCTTCTGGGGTCCCCAGGCGACCTCACCAGAGAGAAACTGTTaGTCACTGACCTTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GPERNCLSLTFWGPQATSPERNC*SLTFWG
Trigger: ACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGG...TGAGGTCGCCTGGGGACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CAA 90 bp GGCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGCTTGAGCCCAGGAGTTaGACACCAGTTTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: GFRQKRQETRVGRWAFCGLEPRS*TPVWAT
Trigger: TGTTGCCCAAACTGGTGTCAAACTCCTGGGCTCAAG...CCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GCACTGAGTGAACCAGACTCCGTCTGCAATCCCGGCACCTCGGGAGGCCGAGGCTTATTTCGTTCCTTTTaGTGGCTGAGTAGTATTCCA +
Preference number: 5 (lower is better)
Translates to: ALSEPDSVCNPGTSGGRGLFRSF*WLSSIP
Trigger: TGGAATACTACTCAGCCACAAAAAGGAACGAAATAA...GCCTCGGCCTCCCGAGGTGCCGGGATTGCAGACGGAGTCTGGTTCACTCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS CCA 90 bp AGAACAGCTGTGTCAAGAGCCTTCAGCTCTGGAGGCACAGAGCAATaGCCTGCCAGCTTTAAAAACCACAGGTCTGGACCTCATCACAGG +
Preference number: 5 (lower is better)
Translates to: RTAVSRAFSSGGTEQ*PASFKNHRSGPHHR
Trigger: CCTGTGATGAGGTCCAGACCTGTGGTTTTTAAAGCTGGCAGGCCATTGCTCTGTGCCTCCAGAGCTGAAGGCTCTTGACACAGCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000519318.5
ENST00000640767.1
CDS-3UTR CAA 90 bp GCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCTGGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: APAPLPFSRQVLTEAGAWLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640942.1
CDS-3UTR CAA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GNPVPPNKCISINNLPVPFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTCCTTCCTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GSSILDEGCLLKHTPVPSFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...GGAAGGAACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR CAA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: GNPVPPNKCISINNLPVPAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCTCTGGGGGTCCCTaGCTTAGCCTGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITCSGGP*LSLCWT
Trigger: GGTCCAGCACAGGCTAAGCAAGGGACCCCCAGAGCA...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCTGCCCAGGGAGTCCTaGCGTCCCATGAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITLPRES*RPMRSS
Trigger: GGAAGACCTCATGGGACGCAAGGACTCCCTGGGCAG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTCCAGAGAGAAACTGTTaGTCACTGACCTTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLPERNC*SLTFWG
Trigger: ACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGG...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000519208.5
ENST00000639865.1
ENST00000640320.1
CDS-3UTR CAA 90 bp GTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAGCCCAGCACATAGCTaGCCTAATGGCTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: VSVRASFSAFFQDQGLGCSPAHS*PNGFHF
Trigger: AAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCT...GCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp CTCCCTGCAGGGGCTACGTTAGCAGCCCAGCACATAGCTTGCCTAATGGCTTTCAGCCCAGCACATAGCTaGCCTAATGGCTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: LPAGATLAAQHIACLMAFSPAHS*PNGFHF
Trigger: AAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCT...GAAAGCCATTAGGCAAGCTATGTGCTGGGCTGCTAACGTAGCCCCTGCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTGAGTTTGACACCAGTTaGGGCAACATGGTGAAACCC +
Preference number: 5 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLEFDTS*GNMVKP
Trigger: GGGTTTCACCATGTTGCCCAAACTGGTGTCAAACTC...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp CTGGCGGATCACTCGTGGTTAGGAGCTGGAGACCAGCCCGGCCAACACAGCGAACCTCCAAAATGTATCTaGTATCCATTCATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LADHSWLGAGDQPGQHSEPPKCI*YPFISL
Trigger: GAGAGAGATGAATGGATACAAGATACATTTTGGAGG...TTCGCTGTGTTGGCCGGGCTGGTCTCCAGCTCCTAACCACGAGTGATCCGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp ATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCCCTGGGCCAACCAGGTaGCTTCTCCTGCAAAAAGGA +
Preference number: 5 (lower is better)
Translates to: IPSLLVSHVFFFTGTDSFPGPTR*LLLQKG
Trigger: TCCTTTTTGCAGGAGAAGCAACCTGGTTGGCCCAGG...GAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524068.5
ENST00000640706.1
CDS-3UTR CAA 90 bp TTCACATTCCCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACACCTGGGCCAACCAGGTaGCTTCTCCTGCAAAAAGGA +
Preference number: 5 (lower is better)
Translates to: FTFPACWCPTFSSSLALTPGPTR*LLLQKG
Trigger: TCCTTTTTGCAGGAGAAGCAACCTGGTTGGCCCAGG...TGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGGGAATGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524068.5
ENST00000640706.1
CDS-3UTR CAA 90 bp GGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: GLCTGQFLCLLPGSGVRVLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp TTGCGTAGAATTGCAGGTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGACCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LRRIAGLCTGQFLCLLPGPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...TCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGACCTGCAATTCTACGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp CCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PACWCPTFSSSLALTVSSPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...AGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CAA 90 bp GGGCCTGGCTCCTCCATTTTGGATGAAGGCTGTTTGCTGAAACACACTCCTGTTCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GPGSSILDEGCLLKHTPVPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000519208.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000639865.1
ENST00000640189.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp TCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAATTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLRAASWSLHHCSSLISKFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...TTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp CAGAATTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QNYHTHAQWSLGPERNCLFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...CAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CAA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp CTTTTTCTAGGTGGCAGGACAAATTGCGCCCATTTAGAGGATGTGGCTGTAACCGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: LFLGGRTNCAHLEDVAVTAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...GGTTACAGCCACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCTAGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000521299.5
ENST00000640189.1
ENST00000640320.1
CDS-3UTR CAA 90 bp AGAGTGCCTCACATACAAGAGTCCACAGCAGGGCAAATGCGAGTGTGGAGGGAAAGGTGGCAGGACAAATaGCGCCCATTTAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: RVPHIQESTAGQMRVWRERWQDK*RPFRGC
Trigger: ACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCT...TTCCCTCCACACTCGCATTTGCCCTGCTGTGGACTCTTGTATGTGAGGCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCCCTCTGAAGAGACCTaGGCTGCTCACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQPSEET*AAHCPH
Trigger: ATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACCCTCTGAAGAGACCTaGGCTGCTCACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: GNPVPPNKCISINNLPVPPSEET*AAHCPH
Trigger: ATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTAGGGCATCCGCAATGTaGGTTTCACTGAGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: ASWSLHHCSSLISKPSAARASAM*VSLRAA
Trigger: GGCAGCTCTCAGTGAAACCAACATTGCGGATGCCCT...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp GGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTTGACTGAAGCGGGGGCCATAGTTGTGTTAAGCTaGCGTAGAATTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: GAPAPLPFSRQVLTEAGAIVVLS*RRIAGL
Trigger: GAGACCTGCAATTCTACGCAAGCTTAACACAACTAT...GGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp GCTTCAGACAGAAAAGACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTGGGTCACAATGCTCTTaGGTCCTGAGTTACCCTCAT +
Preference number: 5 (lower is better)
Translates to: ASDRKDKKPGWEDGLSAGGSQCS*VLSYPH
Trigger: ATGAGGGTAACTCAGGACCAAAGAGCATTGTGACCC...ACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTCTTTTCTGTCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GGGTCTGGCTTCTCTCACCCCAGGAACCAAAGATGCTCTGAAAGTTGGGTGTCGTATAGTCCCAGCACTTaGGGAAGTGGGAAGATTGCT +
Preference number: 5 (lower is better)
Translates to: GSGFSHPRNQRCSESWVSYSPST*GSGKIA
Trigger: AGCAATCTTCCCACTTCCCAAAGTGCTGGGACTATA...CGACACCCAACTTTCAGAGCATCTTTGGTTCCTGGGGTGAGAGAAGCCAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTTATAGTCCCAGCACTTaGGGAAGTGGGAAGATTGCT +
Preference number: 5 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLYSPST*GSGKIA
Trigger: AGCAATCTTCCCACTTCCCAAAGTGCTGGGACTATA...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTCTTGAGCCCAGGAGTTaGACACCAGTTTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTLEPRS*TPVWAT
Trigger: TGTTGCCCAAACTGGTGTCAAACTCCTGGGCTCAAG...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp CTGCACGGAGGCTGGACGGTGCTCCTGCTCCACTTCCTTTTTCTAGGCAGGTCTCTATTTCAGTGTCCATaGATGGTTCTGCTTACACAC +
Preference number: 5 (lower is better)
Translates to: LHGGWTVLLLHFLFLGRSLFQCP*MVLLTH
Trigger: GTGTGTAAGCAGAACCATCAATGGACACTGAAATAG...AGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTCCGTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp TCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCAAGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: SVRASFSAFFQDQGLGCKLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CTTGCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp AAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCCAGGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: KSNVKAAIEWVPAALPPRLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CCTGGGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCACCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GNPVPPNKCISINNLPVPPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp CCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: PTFSSSLALTVSSRDLSGPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...GCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CAA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp ACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TVSSRDLSGSSETCPCSRFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...TCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CAA 90 bp TACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: YTLILDKVSLGVVSRQAGAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...CCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGAGGTGGCAGGACAAATaGCGCCCATTTAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQRWQDK*RPFRGC
Trigger: ACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCT...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCCCTCTGAAGAGACCTaGGCTGCTCACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQPSEET*AAHCPH
Trigger: ATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTGGACAGGCTTTGATTTaGAGGGTTAGCAAGACAAAG +
Preference number: 5 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLGQALI*RVSKTK
Trigger: CTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCC...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp TTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTAGCCCAGCACATAGCTaGCCTAATGGCTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: FLLGLRRLTKGIRNVGFTSPAHS*PNGFHF
Trigger: AAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCT...AGTGAAACCAACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTGAGTTTGACACCAGTTaGGGCAACATGGTGAAACCC +
Preference number: 5 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTEFDTS*GNMVKP
Trigger: GGGTTTCACCATGTTGCCCAAACTGGTGTCAAACTC...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp TCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: SSLALTVSSRDLSGSSETPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...AGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CAA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACAGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAAGGTGGCAGGACAAATaGCGCCCATTTAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: GNPVPPNKCISINNLPVPRWQDK*RPFRGC
Trigger: ACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCT...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCCCTCTGAAGAGACCTaGGCTGCTCACTGTCCACAT +
Preference number: 5 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITPSEET*AAHCPH
Trigger: ATGTGGACAGTGAGCAGCCAAGGTCTCTTCAGAGGG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp AGGGAAAAGCAATGTGAAAGCAGCGATAGAGTGGGTCCCTGCAGCACTGCCACCAAACCTTCTGCTAAATaGCATGACCAGGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: REKQCESSDRVGPCSTATKPSAK*HDQAFQ
Trigger: TTGGAAAGCCTGGTCATGCAATTTAGCAGAAGGTTT...GGTGGCAGTGCTGCAGGGACCCACTCTATCGCTGCTTTCACATTGCTTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GACAAGAAACCCGGGTGGGAAGATGGGCTTTCTGCGGGTAGGAATCGCACACTTCGGCAACATCAAAGTTaGAATTCTGCTTCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: DKKPGWEDGLSAGRNRTLRQHQS*NSASWH
Trigger: ATGCCAAGAAGCAGAATTCAAACTTTGATGTTGCCG...AAGTGTGCGATTCCTACCCGCAGAAAGCCCATCTTCCCACCCGGGTTTCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp TCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTCTGGGGAACTCTGTTaGAGAGAGGATGATCCCAGC +
Preference number: 5 (lower is better)
Translates to: SSLALTVSSRDLSGSSETSGELC*REDDPS
Trigger: GCTGGGATCATCCTCTCTCAAACAGAGTTCCCCAGA...AGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS-3UTR CAA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTTCTCTCCACAAGCTTaGCATGTCCACTTGACACTC +
Preference number: 5 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQFSPQA*HVHLTL
Trigger: GAGTGTCAAGTGGACATGCAAAGCTTGTGGAGAGAA...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTTTCTCTCCACAAGCTTaGCATGTCCACTTGACACTC +
Preference number: 5 (lower is better)
Translates to: ASWSLHHCSSLISKPSAAFSPQA*HVHLTL
Trigger: GAGTGTCAAGTGGACATGCAAAGCTTGTGGAGAGAA...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp AAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGACTTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: KHNDTITTCSPGTGPWQTLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...AGTCTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GCTCCAGTTCTTGGGAGTCCTTTTCTAGATACTTCAGCCAGCGACTCTCTGAGGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: APVLGSPFLDTSASDSLRLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CCTCAGAGAGTCGCTGGCTGAAGTATCTAGAAAAGGACTCCCAAGAACTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000520995.5
ENST00000522663.5
ENST00000523737.5
ENST00000524068.5
ENST00000639215.1
ENST00000639837.1
ENST00000640706.1
ENST00000640942.1
CDS-3UTR CAA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp CTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCGCAGGGGCTGCTGCCTaGTTTCACCTTCCATGTCAG +
Preference number: 5 (lower is better)
Translates to: LLQTWYTLILDKVSLGVVAGAAA*FHLPCQ
Trigger: CTGACATGGAAGGTGAAACAAGGCAGCAGCCCCTGC...GACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGAGGTGGCAGGACAAATaGCGCCCATTTAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQRWQDK*RPFRGC
Trigger: ACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCT...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp ATGAAACACAATGATACCATTACAACATGCAGCCCAGGGACTGGCCCGTGGCAGGGACAGGCTTTGATTTaGAGGGTTAGCAAGACAAAG +
Preference number: 5 (lower is better)
Translates to: MKHNDTITTCSPGTGPWQGQALI*RVSKTK
Trigger: CTTTGTCTTGCTAACCCTCAAAATCAAAGCCTGTCC...CTGCCACGGGCCAGTCCCTGGGCTGCATGTTGTAATGGTATCATTGTGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGAGGCTGGGACAGGCTTaGATTTTGAGGGTTAGCAAG +
Preference number: 5 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQRLGQA*ILRVSK
Trigger: CTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCT...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTAGCCCAGCACATAGCTaGCCTAATGGCTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: ASWSLHHCSSLISKPSAASPAHS*PNGFHF
Trigger: AAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCT...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp TTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTGGTTTCACTATAGTTGTGTTAAGCTaGCGTAGAATTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: FLLGLRRLTKGIRNVGFTIVVLS*RRIAGL
Trigger: GAGACCTGCAATTCTACGCAAGCTTAACACAACTAT...AGTGAAACCAACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp GTCTCTGTACGGGCCAGTTTCTCTGCCTTCTTCCAGGATCAGGGGTTAGGGTGCTCATCTTTAACTCCTTaGCCTTCTCCACATACATTT +
Preference number: 5 (lower is better)
Translates to: VSVRASFSAFFQDQGLGCSSLTP*PSPHTF
Trigger: AAATGTATGTGGAGAAGGCAAAGGAGTTAAAGATGA...GCACCCTAACCCCTGATCCTGGAAGAAGGCAGAGAAACTGGCCCGTACAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp GTTGTGGGCTTCCTGCTGGGACTGAGAAGGCTCACGAAGGGCATCCGCAATGTTTCATCTTTAACTCCTTaGCCTTCTCCACATACATTT +
Preference number: 5 (lower is better)
Translates to: VVGFLLGLRRLTKGIRNVSSLTP*PSPHTF
Trigger: AAATGTATGTGGAGAAGGCAAAGGAGTTAAAGATGA...AACATTGCGGATGCCCTTCGTGAGCCTTCTCAGTCCCAGCAGGAAGCCCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp GTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTCTGGGGAACTCTGTTaGAGAGAGGATGATCCCAGC +
Preference number: 5 (lower is better)
Translates to: VAALKLVPVVDLTFGHGVSGELC*REDDPS
Trigger: GCTGGGATCATCCTCTCTCAAACAGAGTTCCCCAGA...GACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS TCA 90 bp AATCTCACTGAAATGCCTGAAGCAGAAGAAAACTTCCTTCAAGTCTaGGGCCTCTGCTTCTCTGAGCTAAAAGCTCTTAGGCCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: NLTEMPEAEENFLQV*GLCFSELKALRPAS
Trigger: GCTGGCAGGCCTAAGAGCTTTTAGCTCAGAGAAGCAGAGGCCTCAGACTTGAAGGAAGTTTTCTTCTGCTTCAGGCATTTCAGTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521675.1
ENST00000639025.1
CDS-3UTR CAA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTTCTCTCCACAAGCTTaGCATGTCCACTTGACACTC +
Preference number: 5 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQFSPQA*HVHLTL
Trigger: GAGTGTCAAGTGGACATGCAAAGCTTGTGGAGAGAA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCAGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: GTLSLLTSVSRLITCQSQLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CTGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp GGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTCCCATTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: GNPVPPNKCISINNLPVPLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...TGGGACTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp ACTTCGTCAACTGTGACAAAAGACAGAATTATCACACACACGCTCAGTGGTCACCCTGGCTCCTCCATTTaGGATGAAGGCTGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: TSSTVTKDRIITHTLSGHPGSSI*DEGCLL
Trigger: CAGCAAACAGCCTTCATCCAAAATGGAGGAGCCAGG...GTGACCACTGAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR CAA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCAGGTGGCAGGACAAATaGCGCCCATTTAGAGGATGT +
Preference number: 5 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITRWQDK*RPFRGC
Trigger: ACATCCTCTAAATGGGCGCAATTTGTCCTGCCACCT...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCAGGCTGGGACAGGCTTaGATTTTGAGGGTTAGCAAG +
Preference number: 5 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITRLGQA*ILRVSK
Trigger: CTTGCTAACCCTCAAAATCAAAGCCTGTCCCAGCCT...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp CCAGCCTGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTCTATTTCAGTGTCCATaGATGGTTCTGCTTACACAC +
Preference number: 5 (lower is better)
Translates to: PACWCPTFSSSLALTVSSLFQCP*MVLLTH
Trigger: GTGTGTAAGCAGAACCATCAATGGACACTGAAATAG...AGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCAGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp GGCATCCGCAATGTTGGTTTCACTGAGAGCTGCCTCCTGGTCTCTTCACCACTGTTATTTCGTTCCTTTTaGTGGCTGAGTAGTATTCCA +
Preference number: 5 (lower is better)
Translates to: GIRNVGFTESCLLVSSPLLFRSF*WLSSIP
Trigger: TGGAATACTACTCAGCCACAAAAAGGAACGAAATAA...CAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGCGGATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp TTATCACACACACGCTCAGTGGTCACTGGGACCAGAGAGAAACTGTTTGTCACTTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LSHTRSVVTGTREKLFVTLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...AGTGACAAACAGTTTCTCTCTGGTCCCAGTGACCACTGAGCGTGTGTGTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519208.5
ENST00000523737.5
ENST00000639865.1
ENST00000640942.1
CDS-3UTR CAA 90 bp TGCTGGTGTCCCACGTTTTCTTCTTCACTGGCACTGACAGTTTCTTCTAGAGACTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: CWCPTFSSSLALTVSSRDLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...GTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGAAGAAAACGTGGGACACCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CAA 90 bp CTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTGCCAGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LRGTLSLLTSVSRLITCQLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CTGGCAGGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp CTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: LTVSSRDLSGSSETCPCSLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...ACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000522663.5
ENST00000524068.5
ENST00000639837.1
ENST00000640706.1
CDS-3UTR CAA 90 bp GAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACACACGCTCCCAGAGAGAAACTGTTaGTCACTGACCTTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: ESHTSSTVTKDRIITHTLPERNC*SLTFWG
Trigger: ACCCCAGAAGGTCAGTGACAAACAGTTTCTCTCTGG...GAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR CAA 90 bp TACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGAGCCCAGCACATAGCTaGCCTAATGGCTTTCACTTT +
Preference number: 5 (lower is better)
Translates to: YTLILDKVSLGVVSRQAGSPAHS*PNGFHF
Trigger: AAAGTGAAAGCCATTAGGCAAGCTATGTGCTGGGCT...CCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp GCCTCCTGGTCTCTTCACCACTGTAGTTCTCTCATTTCCAAACCATCAGCTGCTATAGTTGTGTTAAGCTaGCGTAGAATTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: ASWSLHHCSSLISKPSAAIVVLS*RRIAGL
Trigger: GAGACCTGCAATTCTACGCAAGCTTAACACAACTAT...AGCAGCTGATGGTTTGGAAATGAGAGAACTACAGTGGTGAAGAGACCAGGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518235.5
ENST00000522663.5
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp CGGGTAGGAATCGCACACTTCGTCAACTGTGACAAAAGACAGAATTATCACACATTCTCTCCACAAGCTTaGCATGTCCACTTGACACTC +
Preference number: 5 (lower is better)
Translates to: RVGIAHFVNCDKRQNYHTFSPQA*HVHLTL
Trigger: GAGTGTCAAGTGGACATGCAAAGCTTGTGGAGAGAA...TGTGTGATAATTCTGTCTTTTGTCACAGTTGACGAAGTGTGCGATTCCTACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518219.5
ENST00000519208.5
ENST00000639865.1
ENST00000640320.1
CDS-3UTR CAA 90 bp AAGTGCCTTAGGGGAACCCTGTCCCTCCTAACAAGTGTATCTCGATTAATAACCTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: KCLRGTLSLLTSVSRLITLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...GGTTATTAATCGAGATACACTTGTTAGGAGGGACAGGGTTCCCCTAAGGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000292586.11
ENST00000376931.6
ENST00000518219.5
ENST00000523084.5
ENST00000610475.4
ENST00000638399.1
ENST00000639632.2
ENST00000639933.1
ENST00000640320.1
ENST00000640658.1
CDS-3UTR CAA 90 bp AACTGTGACAAAAGACAGAATTATCACACACACGCTCAGTGGTCACTGGGACCATTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: NCDKRQNYHTHAQWSLGPLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...TGGTCCCAGTGACCACTGAGCGTGTGTGTGATAATTCTGTCTTTTGTCACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519208.5
ENST00000639865.1
CDS-3UTR CAA 90 bp TACACTCTGATTTTAGATAAAGTAAGCCTAGGTGTTGTCAGCAGGCAGGCTGGGTTGGATGAAGGCTGTTaGCTGAAACACACTCCTGTT +
Preference number: 5 (lower is better)
Translates to: YTLILDKVSLGVVSRQAGLDEGC*LKHTPV
Trigger: AACAGGAGTGTGTTTCAGCAAACAGCCTTCATCCAA...CCCAGCCTGCCTGCTGACAACACCTAGGCTTACTTTATCTAAAATCAGAGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp CTGGTCATTCTTCTAGGATTTGGAGATTCAAAGCCACTTACTTACCCAGGATCAGGGTCACAATGCTCTTaGGTCCTGAGTTACCCTCAT +
Preference number: 5 (lower is better)
Translates to: LVILLGFGDSKPLTYPGSGSQCS*VLSYPH
Trigger: ATGAGGGTAACTCAGGACCAAAGAGCATTGTGACCC...TGATCCTGGGTAAGTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp TCTTCACTGGCACTGACAGTTTCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTTCTTTATCCACTCATaGCTTGATGGGCAGTTAGGT +
Preference number: 5 (lower is better)
Translates to: SSLALTVSSRDLSGSSETFFIHS*LDGQLG
Trigger: ACCTAACTGCCCATCAAGCAATGAGTGGATAAAGAA...AGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGAAACTGTCAGTGCCAGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS TCA 90 bp CGAAAACAGGGCAAGACAACCACGCTCTTCTCAAACAACTGTACCTaGGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACTTTT +
Preference number: 5 (lower is better)
Translates to: RKQGKTTTLFSNNCT*VAALKLVPVVDLTF
Trigger: AAAAGTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTACAGTTGTTTGAGAAGAGCGTGGTTGTCTTGCCCTGTTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519318.5
ENST00000640767.1
CDS CCA 90 bp GACTCCCTTGCTGTAGCAAGCTCTGAATACTGTTTCTCATTTGGGTaGTTTTCCTTCATTTCTACGTTTGAGCTACTGTGGCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: DSLAVASSEYCFSFG*FSFISTFELLWLRT
Trigger: TGTTCTCAGCCACAGTAGCTCAAACGTAGAAATGAAGGAAAACCACCCAAATGAGAAACAGTATTCAGAGCTTGCTACAGCAAGGGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519398.1
ENST00000640611.1
CDS-3UTR CAA 90 bp GTTGATTATTTTCTGCTACAGACCTGGTACACTCTGATTTTAGATAAAGTAAGCTTTTCTAGGCAGGTCTaGACTGAAGCGGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VDYFLLQTWYTLILDKVSFSRQV*TEAGAW
Trigger: CCAGGCCCCCGCTTCAGTCAAGACCTGCCTAGAAAA...GCTTACTTTATCTAAAATCAGAGTGTACCAGGTCTGTAGCAGAAAATAATCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000518235.5
ENST00000520698.5
ENST00000522663.5
ENST00000638829.1
ENST00000639837.1
ENST00000640690.1
CDS-3UTR CAA 90 bp CCCCTCTTCTGTCTCATAGTTGTGTTAAGCTTGCGTAGAATTGCAGGTCTCTGTATAGTTGTGTTAAGCTaGCGTAGAATTGCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: PLFCLIVVLSLRRIAGLCIVVLS*RRIAGL
Trigger: GAGACCTGCAATTCTACGCAAGCTTAACACAACTAT...ACAGAGACCTGCAATTCTACGCAAGCTTAACACAACTATGAGACAGAAGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS-3UTR CAA 90 bp TCTTCTAGAGACCTGAGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGATTTAACACTCAGCTCTTCCAGTaGGCTTGGAATGAGATTCTA +
Preference number: 5 (lower is better)
Translates to: SSRDLSGSSETCPCSRFNTQLFQ*AWNEIL
Trigger: TAGAATCTCATTCCAAGCCAACTGGAAGAGCTGAGT...GTTAAATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTCTCTAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS CCA 90 bp AGTTTCACCTTCTGCAGCTTTAGTTACCCAGAGTCAACAGCCACCTaGAAAAGAGATGAGTACAGTACAAGAAGATATTGTGAGACAGAC +
Preference number: 5 (lower is better)
Translates to: SFTFCSFSYPESTAT*KRDEYSTRRYCETD
Trigger: GTCTGTCTCACAATATCTTCTTGTACTGTACTCATCTCTTTTCCAGGTGGCTGTTGACTCTGGGTAACTAAAGCTGCAGAAGGTGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519398.1
ENST00000640611.1
CDS-3UTR CAA 90 bp CTGGTCATTCTTCTAGGATTTGGAGATTCAAAGCCACTTACTTACCCAGGATCACGGCAACATCAAAGTTaGAATTCTGCTTCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: LVILLGFGDSKPLTYPGSRQHQS*NSASWH
Trigger: ATGCCAAGAAGCAGAATTCAAACTTTGATGTTGCCG...TGATCCTGGGTAAGTAAGTGGCTTTGAATCTCCAAATCCTAGAAGAATGACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518219.5
ENST00000640320.1
CDS-3UTR CAA 90 bp TCTGAAACTTGTCCCTGTAGTAGATTTAACTTTTGGACATGGCGTCTACAATCAACTCAGCTCTTCCAGTaGGCTTGGAATGAGATTCTA +
Preference number: 5 (lower is better)
Translates to: SETCPCSRFNFWTWRLQSTQLFQ*AWNEIL
Trigger: TAGAATCTCATTCCAAGCCAACTGGAAGAGCTGAGT...TGATTGTAGACGCCATGTCCAAAAGTTAAATCTACTACAGGGACAAGTTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519213.1
ENST00000523835.5
ENST00000638405.1
ENST00000639381.1
CDS-3UTR CAA 90 bp AAACCATCAGCTGCTTTTAAAATAAGATCTCTTTGTAGCCATCCTGCTGGATGGTTCTTTATCCACTCATaGCTTGATGGGCAGTTAGGT +
Preference number: 5 (lower is better)
Translates to: KPSAAFKIRSLCSHPAGWFFIHS*LDGQLG
Trigger: ACCTAACTGCCCATCAAGCAATGAGTGGATAAAGAA...CCATCCAGCAGGATGGCTACAAAGAGATCTTATTTTAAAAGCAGCTGATGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522663.5
ENST00000639837.1
CDS GCA 72 bp TCCCGCGCTTGGCTGACGCTCACAGTGGCTCACTGGTaGCCCACTGCTGGAGGCAGCAGAGGCCCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: SRAWLTLTVAHW*PTAGGSRGPGP
Trigger: TGGCCCAGGGCCTCTGCTGCCTCCAGCAGTGGGGCACCAGTGAGCCACTGTGAGCGTCAGCCAAGCGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521675.1
ENST00000639025.1
CDS TCA 72 bp AGGCGGCAGCTGCAGCAGCGTAGCACCCGAGAACGCTaGAGCGACGCCATCCCTGCTTGTGCAGTCGCCAGG +
Preference number: 6 (lower is better)
Translates to: RRQLQQRSTRER*SDAIPACAVAR
Trigger: CCTGGCGACTGCACAAGCAGGGATGGCGTCGCTTCAGCGTTCTCGGGTGCTACGCTGCTGCAGCTGCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000519208.5
ENST00000519213.1
ENST00000520150.5
ENST00000520995.5
ENST00000521299.5
ENST00000522663.5
ENST00000523084.5
ENST00000523737.5
ENST00000639215.1
ENST00000639381.1
ENST00000639837.1
ENST00000639865.1
ENST00000639933.1
ENST00000640189.1
ENST00000640912.1
ENST00000640942.1
CDS GCA 72 bp CACCCGAGAACGCTGAAGCGACGCCATCCCTGCTTGTaGAGTCGCCAGGCAGCCAAGCGCGTGCGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: HPRTLKRRHPCL*SRQAAKRVRSA
Trigger: TGCAGAGCGCACGCGCTTGGCTGCCTGGCGACTGCACAAGCAGGGATGGCGTCGCTTCAGCGTTCTCGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000519213.1
ENST00000520150.5
ENST00000521299.5
ENST00000522663.5
ENST00000523737.5
ENST00000639381.1
ENST00000639837.1
ENST00000640189.1
ENST00000640912.1
ENST00000640942.1
CDS CAA 72 bp CCACCTGCTGGCACTTGCCACCTAGGCTTCCCGCGCTaGGCTGACGCTCACAGTGGCTCACTGGTGCCCCAC +
Preference number: 6 (lower is better)
Translates to: PPAGTCHLGFPR*ADAHSGSLVPH
Trigger: GTGGGGCACCAGTGAGCCACTGTGAGCGTCAGCCAAGCGCGGGAAGCCTAGGTGGCAAGTGCCAGCAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521675.1
ENST00000639025.1
CDS CAA 90 bp CCCGATTTCCCACCTGCTGGCACTTGCCACCTAGGCTTCCCGCGCTaGGCTGACGCTCACAGTGGCTCACTGGTGCCCCACTGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: PDFPPAGTCHLGFPR*ADAHSGSLVPHCWR
Trigger: CCTCCAGCAGTGGGGCACCAGTGAGCCACTGTGAGCGTCAGCCAAGCGCGGGAAGCCTAGGTGGCAAGTGCCAGCAGGTGGGAAATCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521675.1
ENST00000639025.1
CDS TCA 72 bp TGCTGGCACTTGCCACCTAGGCTTCCCGCGCTTGGCTaGCGCTCACAGTGGCTCACTGGTGCCCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: CWHLPPRLPALG*RSQWLTGAPLL
Trigger: CAGCAGTGGGGCACCAGTGAGCCACTGTGAGCGTCAGCCAAGCGCGGGAAGCCTAGGTGGCAAGTGCCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521675.1
ENST00000639025.1
CDS GCA 72 bp TGGCAGCAGCTGCCCGATTTCCCACCTGCTGGCACTTaGCACCTAGGCTTCCCGCGCTTGGCTGACGCTCAC +
Preference number: 6 (lower is better)
Translates to: WQQLPDFPPAGT*HLGFPRLADAH
Trigger: GTGAGCGTCAGCCAAGCGCGGGAAGCCTAGGTGGCAAGTGCCAGCAGGTGGGAAATCGGGCAGCTGCTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521675.1
ENST00000639025.1
CDS CCA 72 bp CTCAGCTCCCCGGCACTGCAGTCTGCAGAGTTCTCCTaGAGGCAGGGGCTGCTGCCTGTTTCACCTTCCATG +
Preference number: 6 (lower is better)
Translates to: LSSPALQSAEFS*RQGLLPVSPSM
Trigger: CATGGAAGGTGAAACAGGCAGCAGCCCCTGCCTCCAGGAGAACTCTGCAGACTGCAGTGCCGGGGAGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610475.4
ENST00000638399.1
CDS TCA 72 bp GGTGTCTGCCTACCTGGTAAGCCAGCCCCTCTCTTCTaGGACCCAATCCCAGTTGACTGGACCAGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: GVCLPGKPAPLF*DPIPVDWTRGG
Trigger: CCCACCTCTGGTCCAGTCAACTGGGATTGGGTCTCAGAAGAGAGGGGCTGGCTTACCAGGTAGGCAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517338.1
ENST00000638169.1
CDS CAA 72 bp CTCGGAAGCAGGAGCTCCGTGTCTGGGGAACTCTGTTaGAGAGAGGATGATCCCAGCTGTGGCATGCTGGGA +
Preference number: 6 (lower is better)
Translates to: LGSRSSVSGELC*REDDPSCGMLG
Trigger: TCCCAGCATGCCACAGCTGGGATCATCCTCTCTCAAACAGAGTTCCCCAGACACGGAGCTCCTGCTTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522157.5
ENST00000639532.1
CDS GCA 72 bp GAGGTGGGCATCCGAGTCAGCCTGGGCCAACCAGGTTaGTTCTCCTGCAAAAAGGACTGCTTCTCTCCACAA +
Preference number: 6 (lower is better)
Translates to: EVGIRVSLGQPG*FSCKKDCFSPQ
Trigger: TTGTGGAGAGAAGCAGTCCTTTTTGCAGGAGAAGCAACCTGGTTGGCCCAGGCTGACTCGGATGCCCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524068.5
ENST00000640706.1
CDS GCA 72 bp CTGGGCCAACCAGGTTGCTTCTCCTGCAAAAAGGACTaGTTCTCTCCACAAGCTTTGCATGTCCACTTGACA +
Preference number: 6 (lower is better)
Translates to: LGQPGCFSCKKD*FSPQALHVHLT
Trigger: TGTCAAGTGGACATGCAAAGCTTGTGGAGAGAAGCAGTCCTTTTTGCAGGAGAAGCAACCTGGTTGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524068.5
ENST00000640706.1
CDS TCA 72 bp GGCAAGACAACCACGCTCTTCTCAAACAACTGTACCTaGGTGGCAGCTCTGAAACTTGTCCCTGTAGTAGAT +
Preference number: 6 (lower is better)
Translates to: GKTTTLFSNNCT*VAALKLVPVVD
Trigger: ATCTACTACAGGGACAAGTTTCAGAGCTGCCACTCAGGTACAGTTGTTTGAGAAGAGCGTGGTTGTCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519318.5
ENST00000640767.1
CDS TCA 72 bp GAAATGCCTGAAGCAGAAGAAAACTTCCTTCAAGTCTaGGGCCTCTGCTTCTCTGAGCTAAAAGCTCTTAGG +
Preference number: 6 (lower is better)
Translates to: EMPEAEENFLQV*GLCFSELKALR
Trigger: CCTAAGAGCTTTTAGCTCAGAGAAGCAGAGGCCTCAGACTTGAAGGAAGTTTTCTTCTGCTTCAGGCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521675.1
ENST00000639025.1
CDS GCA 72 bp GCTTTCTGTTTTGTAGGACTCACCTGCAAAAAGGACTaGTTCTCTCCACAAGCTTTGCATGTCCACTTGACA +
Preference number: 6 (lower is better)
Translates to: AFCFVGLTCKKD*FSPQALHVHLT
Trigger: TGTCAAGTGGACATGCAAAGCTTGTGGAGAGAAGCAGTCCTTTTTGCAGGTGAGTCCTACAAAACAGAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000519398.1
ENST00000522157.5
ENST00000639532.1
ENST00000640611.1
CDS GCA 72 bp TTATTTTCAGTGGGAGAATTGCTCAGGGTGTTTGACTaGCATATTGTAAGACGTGGAAGTCTAAGGGACTTC +
Preference number: 6 (lower is better)
Translates to: LFSVGELLRVFD*HIVRRGSLRDF
Trigger: GAAGTCCCTTAGACTTCCACGTCTTACAATATGGCAGTCAAACACCCTGAGCAATTCTCCCACTGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519318.5
ENST00000640767.1
CDS TCA 72 bp TTAGTTATTTTCAGTGGGAGAATTGCTCAGGGTGTTTaGCTGCCATATTGTAAGACGTGGAAGTCTAAGGGA +
Preference number: 6 (lower is better)
Translates to: LVIFSGRIAQGV*LPYCKTWKSKG
Trigger: TCCCTTAGACTTCCACGTCTTACAATATGGCAGTCAAACACCCTGAGCAATTCTCCCACTGAAAATAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519318.5
ENST00000640767.1
CDS TCA 72 bp TTTCTCATTTGGGTGGTTTTCCTTCATTTCTACGTTTaGGCTACTGTGGCTGAGAACAGAAAGCATCTGAGT +
Preference number: 6 (lower is better)
Translates to: FLIWVVFLHFYV*ATVAENRKHLS
Trigger: ACTCAGATGCTTTCTGTTCTCAGCCACAGTAGCTCAAACGTAGAAATGAAGGAAAACCACCCAAATGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519398.1
ENST00000640611.1
CDS CCA 72 bp TTCTGCAGCTTTAGTTACCCAGAGTCAACAGCCACCTaGAAAAGAGATGAGTACAGTACAAGAAGATATTGT +
Preference number: 6 (lower is better)
Translates to: FCSFSYPESTAT*KRDEYSTRRYC
Trigger: ACAATATCTTCTTGTACTGTACTCATCTCTTTTCCAGGTGGCTGTTGACTCTGGGTAACTAAAGCTGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519398.1
ENST00000640611.1
CDS CCA 72 bp GAATTTATAATTGAGACTCAGCTCTTCCAGTTGGCTTaGAATGAGATTCTATGGACTTGGAGCAGAGAATCT +
Preference number: 6 (lower is better)
Translates to: EFIIETQLFQLA*NEILWTWSRES
Trigger: AGATTCTCTGCTCCAAGTCCATAGAATCTCATTCCAAGCCAACTGGAAGAGCTGAGTCTCAATTATAAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000517338.1
ENST00000519213.1
ENST00000523835.5
ENST00000638169.1
ENST00000638405.1
ENST00000639381.1