Pregenerated sensors for MRM3 (Homo sapiens)
Ensembl gene IDs: ENSG00000171861Ensembl transcript IDs: ENST00000304478.9
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACGTGGGGGCCATAGTCACTGACTCCGCCAGCCTCCCACCAGTGTaGTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGCAGAAGTCACT | + |
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Preference number: 1 (lower is better) Translates to: NVGAIVTDSASLPPV*WCRRSCRRPQAEVT Trigger: AGTGACTTCTGCTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGAGTCAGTGACTATGGCCCCCACGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| 3UTR CCA 90 bp | GTGGGGGCCATAGTCACTGACTCCGCCAGCCTCCCACCAGTGTGCTaGTGTAGGAGGAGCTGCAGACGTCCTCAAGCAGAAGTCACTTCT | + |
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Preference number: 1 (lower is better) Translates to: VGAIVTDSASLPPVC*CRRSCRRPQAEVTS Trigger: AGAAGTGACTTCTGCTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGAGTCAGTGACTATGGCCCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| 3UTR TCA 90 bp | GGACCTGTTCTTTCTGAGGAAGTTCTTATTTTTCCTGTAACTGTATaGCGGCATCACACCTTCCTCCTGAACGTGGGGGCCATAGTCACT | + |
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Preference number: 1 (lower is better) Translates to: GPVLSEEVLIFPVTV*RHHTFLLNVGAIVT Trigger: AGTGACTATGGCCCCCACGTTCAGGAGGAAGGTGTGATGCCGTCATACAGTTACAGGAAAAATAAGAACTTCCTCAGAAAGAACAGGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| 3UTR TCA 90 bp | CTCAAAATCAGTGACGCGACAGGAAGAATTCGGACCTGTTCTTTCTaGGGAAGTTCTTATTTTTCCTGTAACTGTATGACGGCATCACAC | + |
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Preference number: 1 (lower is better) Translates to: LKISDATGRIRTCSF*GSSYFSCNCMTASH Trigger: GTGTGATGCCGTCATACAGTTACAGGAAAAATAAGAACTTCCTCAGAAAGAACAGGTCCGAATTCTTCCTGTCGCGTCACTGATTTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| 3UTR GCA 72 bp | GCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTaGAGACGTCCTCAAGCAGAAGTCACTTCTGCGTCC | + |
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Preference number: 3 (lower is better) Translates to: ASLPPVCWCRRS*RRPQAEVTSAS Trigger: GGACGCAGAAGTGACTTCTGCTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| 3UTR GCA 72 bp | GCCATAGTCACTGACTCCGCCAGCCTCCCACCAGTGTaGTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: AIVTDSASLPPV*WCRRSCRRPQA Trigger: TGCTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGAGTCAGTGACTATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| 3UTR CCA 72 bp | ATAGTCACTGACTCCGCCAGCCTCCCACCAGTGTGCTaGTGTAGGAGGAGCTGCAGACGTCCTCAAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: IVTDSASLPPVC*CRRSCRRPQAE Trigger: TTCTGCTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGAGTCAGTGACTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR TCA 90 bp | CCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGGGGGGCCATAGTCACTaGCTCCGCCAGCCTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: PPASHQCAGVGGAADVLKGGHSH*LRQPPT Trigger: GGTGGGAGGCTGGCGGAGTCAGTGACTATGGCCCCC...CTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGG 67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | CCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGGCTGGGAGCGCGGGATaGGGACTCCTCGAGCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: PPASHQCAGVGGAADVLKAGSAG*GLLERL Trigger: CAACCGCTCGAGGAGTCCGCATCCCGCGCTCCCAGC...CTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR TCA 90 bp | CCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGCCGCCATGGCCGAGTTaGGGCTGTCCACACCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: PPASHQCAGVGGAADVLKPPWPS*GCPHQA Trigger: TGCCTGGTGTGGACAGCCTCAACTCGGCCATGGCGG...CTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | CCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGGTGCTCTCGGCCAGCTaGAGGGACTCCAGGCTCACG | + |
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Preference number: 4 (lower is better) Translates to: PPASHQCAGVGGAADVLKVLSAS*RDSRLT Trigger: CGTGAGCCTGGAGTCCCTGCAGCTGGCCGAGAGCAC...CTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | CCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGAGCCTCCCACCAGTGTaGTGGTGTAGGAGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PPASHQCAGVGGAADVLKSLPPV*WCRRSC Trigger: GCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCT...CTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CCA 90 bp | TCCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAACTCCCACCAGTGTGCTaGTGTAGGAGGAGCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SASLPPVCWCRRSCRRPQLPPVC*CRRSCR Trigger: TCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAG...TTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | CCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGCTATTGTCATTACACTaGTCAGCCTCCTGTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PPASHQCAGVGGAADVLKLLSLH*SASCPR Trigger: CCGGGGACAGGAGGCTGAGCAGTGTAATGACAATAG...CTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | TCCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGAAAAGCAGGATGCTTaGCGCCATGGCCGAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SASLPPVCWCRRSCRRPQEKQDA*RHGRVE Trigger: CTCAACTCGGCCATGGCGGCAAGCATCCTGCTTTTC...TTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR TCA 90 bp | CCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGAACTTCATCACTCGTTaGTCACACACCCAGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: PPASHQCAGVGGAADVLKNFITR*SHTQPW Trigger: CCATGGCTGGGTGTGTGATCAACGAGTGATGAAGTT...CTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | TCCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAATGGTGTAGGAGGAGCTaGAGACGTCCTCAAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SASLPPVCWCRRSCRRPQWCRRS*RRPQAE Trigger: TTCTGCTTGAGGACGTCTGCAGCTCCTCCTACACCA...TTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR TCA 90 bp | CCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGTTTCCTGTAACTGTATaGCGGCATCACACCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PPASHQCAGVGGAADVLKFPVTV*RHHTFL Trigger: GAGGAAGGTGTGATGCCGTCATACAGTTACAGGAAA...CTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCGGGCATCCGGAAATGTaGGCCCATACCCGCCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: AVSDVAVTYSWCLAITNTGHPEM*AHTRPE Trigger: CTCCGGGCGGGTATGGGCGCACATTTCCGGATGCCC...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCGCCTCTTGCCACCAGTaGTCTCGGCCAGCTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: AVSDVAVTYSWCLAITNTASCHQ*SRPAAG Trigger: CCCTGCAGCTGGCCGAGAGCACTGGTGGCAAGAGGC...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CCA 90 bp | TCCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAACACACAGAGCCACGTaGGTCACCTATTGTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: SASLPPVCWCRRSCRRPQTHRAT*VTYCHQ Trigger: TTGGTGACAATAGGTGACCCACGTGGCTCTGTGTGT...TTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CCA 90 bp | TCCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAACCTATAGCTGGTGCTTaGCGATTACAAACACCCACC | + |
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Preference number: 4 (lower is better) Translates to: SASLPPVCWCRRSCRRPQPIAGA*RLQTPT Trigger: GGTGGGTGTTTGTAATCGCCAAGCACCAGCTATAGG...TTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR TCA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCGCCTCCCTGCCAGGATaGTGCTTCAGGAACTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AVSDVAVTYSWCLAITNTASLPG*CFRNFL Trigger: CAGAAAGTTCCTGAAGCATCATCCTGGCAGGGAGGC...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCCTTCGAAAAGCAGGATaGTTGCCGCCATGGCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: AVSDVAVTYSWCLAITNTLRKAG*LPPWPS Trigger: ACTCGGCCATGGCGGCAAGCATCCTGCTTTTCGAAG...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCAGCAGAAGTCACTTCTaGGTCCTCAGTGGTAACTCC | + |
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Preference number: 4 (lower is better) Translates to: AVSDVAVTYSWCLAITNTSRSHF*VLSGNS Trigger: GGAGTTACCACTGAGGACGCAGAAGTGACTTCTGCT...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR TCA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCGAACCTCAAAATCAGTaGCGCGACAGGAAGAATTCG | + |
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Preference number: 4 (lower is better) Translates to: AVSDVAVTYSWCLAITNTEPQNQ*RDRKNS Trigger: CGAATTCTTCCTGTCGCGTCACTGATTTTGAGGTTC...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR TCA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCTTTTCCACCAACCAGTaGTCAGCTGTGAGTGATGTG | + |
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Preference number: 4 (lower is better) Translates to: AVSDVAVTYSWCLAITNTFSTNQ*SAVSDV Trigger: CACATCACTCACAGCTGATCACTGGTTGGTGGAAAA...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR GCA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCGTGACCTATAGCTGGTaGTTGGCGATTACAAACACC | + |
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Preference number: 4 (lower is better) Translates to: AVSDVAVTYSWCLAITNTVTYSW*LAITNT Trigger: GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCAC...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CCA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCGCAGCCAATCTTGACTaGCTCCGGTTTCTACATCTT | + |
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Preference number: 4 (lower is better) Translates to: AVSDVAVTYSWCLAITNTAANLD*LRFLHL Trigger: AAGATGTAGAAACCGGAGCCAGTCAAGATTGGCTGC...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CCA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCGCTGTGACCTATAGCTaGTGCTTGGCGATTACAAAC | + |
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Preference number: 4 (lower is better) Translates to: AVSDVAVTYSWCLAITNTAVTYS*CLAITN Trigger: GTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGC...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS GCA 90 bp | ACTGACTCCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTaGAGACGTCCTCAAGCAGAAGTCACTTCTGCGTCCTCAGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: TDSASLPPVCWCRRS*RRPQAEVTSASSVV Trigger: TACCACTGAGGACGCAGAAGTGACTTCTGCTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGAGTCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CAA 90 bp | CCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAGGCATCCACACAGCCTTaGGTGAGTAACACTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PPASHQCAGVGGAADVLKASTQP*VSNTLL Trigger: CAGCAAAGTGTTACTCACCAAAGGCTGTGTGGATGC...CTTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CAA 90 bp | TCCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAAACCTATAGCTGGTGCTaGGCGATTACAAACACCCAC | + |
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Preference number: 5 (lower is better) Translates to: SASLPPVCWCRRSCRRPQTYSWC*AITNTH Trigger: GTGGGTGTTTGTAATCGCCAAGCACCAGCTATAGGT...TTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CAA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCGGACTCCTCGAGCGGTaGTTTCTCTCGTTGCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: AVSDVAVTYSWCLAITNTGLLER*FLSLLL Trigger: CAGGAGCAACGAGAGAAACAACCGCTCGAGGAGTCC...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CAA 90 bp | TCCGCCAGCCTCCCACCAGTGTGCTGGTGTAGGAGGAGCTGCAGACGTCCTCAATCCCATTCCAGATTATaGATAATGGGCATCCGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SASLPPVCWCRRSCRRPQSHSRL*IMGIRK Trigger: TTTCCGGATGCCCATTATCAATAATCTGGAATGGGA...TTGAGGACGTCTGCAGCTCCTCCTACACCAGCACACTGGTGGGAGGCTGGCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CAA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCATGAGGCAGCCAATCTaGACTGGCTCCGGTTTCTAC | + |
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Preference number: 5 (lower is better) Translates to: AVSDVAVTYSWCLAITNTMRQPI*TGSGFY Trigger: GTAGAAACCGGAGCCAGTCAAGATTGGCTGCCTCAT...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS-3UTR CAA 90 bp | GCTGTGAGTGATGTGGCTGTGACCTATAGCTGGTGCTTGGCGATTACAAACACCAAACTTCATCACTCGTaGATCACACACCCAGCCATG | + |
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Preference number: 5 (lower is better) Translates to: AVSDVAVTYSWCLAITNTKLHHS*ITHPAM Trigger: CATGGCTGGGTGTGTGATCAACGAGTGATGAAGTTT...GGTGTTTGTAATCGCCAAGCACCAGCTATAGGTCACAGCCACATCACTCACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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| CDS TCA 72 bp | CTTCGAAAAGCAGGATGCTTGCCGCCATGGCCGAGTTaGGGCTGTCCACACCAGGCACAACGGGGATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LRKAGCLPPWPS*GCPHQAQRGSA Trigger: TGCTGATCCCCGTTGTGCCTGGTGTGGACAGCCTCAACTCGGCCATGGCGGCAAGCATCCTGCTTTTCGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304478.9 |
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