RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000122687

Ensembl transcript IDs: ENST00000242257.14, ENST00000407040.1, ENST00000440306.3, ENST00000467199.5, ENST00000486040.1

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGTCACGCTGAGAAGGGTCAGGCACAGGCTGATGAGCCTGTCATaGTCGAGGTCCCGGAACCCTGTGGCATTGGGCGCCATGTCGCTC +
Preference number: 1 (lower is better)
Translates to: GVTLRRVRHRLMSLS*SRSRNPVALGAMSL
Trigger: GAGCGACATGGCGCCCAATGCCACAGGGTTCCGGGACCTCGATCATGACAGGCTCATCAGCCTGTGCCTGACCCTTCTCAGCGTGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 90 bp CCTGGCCATGAAGCCTCTTCTAGGTTCCGGACGGAGCAGCCCCAGTaGGGCCACCAGGAAAGCCCCAGGGCTTATGCGACTTGGAAATTT +
Preference number: 1 (lower is better)
Translates to: PGHEASSRFRTEQPQ*GHQESPRAYATWKF
Trigger: AAATTTCCAAGTCGCATAAGCCCTGGGGCTTTCCTGGTGGCCCCACTGGGGCTGCTCCGTCCGGAACCTAGAAGAGGCTTCATGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR GCA 90 bp CTGTGGCATTGGGCGCCATGTCGCTCAGAATCACATCTGCTCTCCTaGCAGGAAGCACCTCGAGGATTCTCTGTGAGGTTCTCGGGTCAG +
Preference number: 1 (lower is better)
Translates to: LWHWAPCRSESHLLS*QEAPRGFSVRFSGQ
Trigger: CTGACCCGAGAACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGAGAGCAGATGTGATTCTGAGCGACATGGCGCCCAATGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR TCA 90 bp AATCACATCTGCTCTCCTGCCAGGAAGCACCTCGAGGATTCTCTGTaGGGTTCTCGGGTCAGTCACGTCAGCAGGGCACAGAAAAGTTGC +
Preference number: 1 (lower is better)
Translates to: NHICSPARKHLEDSL*GSRVSHVSRAQKSC
Trigger: GCAACTTTTCTGTGCCCTGCTGACGTGACTGACCCGAGAACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGAGAGCAGATGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 90 bp GTCCCTACTCTAAGGTATTTGGGAGAGACTTGGGAGAGCTCTGGGTaGACTGTCTCACCCTGTTCAAATGCCAGTGCATGCAGCTACCCT +
Preference number: 1 (lower is better)
Translates to: VPTLRYLGETWESSG*TVSPCSNASACSYP
Trigger: AGGGTAGCTGCATGCACTGGCATTTGAACAGGGTGAGACAGTCCACCCAGAGCTCTCCCAAGTCTCTCCCAAATACCTTAGAGTAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR GCA 90 bp TATAAGATGAAGTCCCGTCAAGGCACACATGGGCACACCCATCCCTaGCTCGGCGGATTCCTTCTGATCCTTCCCACAGTCTGTTTTTCT +
Preference number: 1 (lower is better)
Translates to: YKMKSRQGTHGHTHP*LGGFLLILPTVCFS
Trigger: AGAAAAACAGACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGTGTGCCTTGACGGGACTTCATCTTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR CCA 90 bp CAGTGTCCCTACTCTAAGGTATTTGGGAGAGACTTGGGAGAGCTCTaGGTGGACTGTCTCACCCTGTTCAAATGCCAGTGCATGCAGCTA +
Preference number: 1 (lower is better)
Translates to: QCPYSKVFGRDLGEL*VDCLTLFKCQCMQL
Trigger: TAGCTGCATGCACTGGCATTTGAACAGGGTGAGACAGTCCACCCAGAGCTCTCCCAAGTCTCTCCCAAATACCTTAGAGTAGGGACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 90 bp TGCCAGTGCATGCAGCTACCCTGGCTTTACAGCAGGAAACATAAATaGCAAGGATATTCACCACAGCACACGCATCCCAGCCAAAAGCCA +
Preference number: 1 (lower is better)
Translates to: CQCMQLPWLYSRKHK*QGYSPQHTHPSQKP
Trigger: TGGCTTTTGGCTGGGATGCGTGTGCTGTGGTGAATATCCTTGCCATTTATGTTTCCTGCTGTAAAGCCAGGGTAGCTGCATGCACTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 90 bp GAAATCCTCACTGCTTCACAGTGCCCTTCCTTCCGTGGTACTGTGTaGCCAAGAAGTACACTTCTGATGACTCTTTCCTGCTGGCTTCAG +
Preference number: 1 (lower is better)
Translates to: EILTASQCPSFRGTV*PRSTLLMTLSCWLQ
Trigger: CTGAAGCCAGCAGGAAAGAGTCATCAGAAGTGTACTTCTTGGCCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAGGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 90 bp GTGGACTGTCTCACCCTGTTCAAATGCCAGTGCATGCAGCTACCCTaGCTTTACAGCAGGAAACATAAATGGCAAGGATATTCACCACAG +
Preference number: 1 (lower is better)
Translates to: VDCLTLFKCQCMQLP*LYSRKHKWQGYSPQ
Trigger: CTGTGGTGAATATCCTTGCCATTTATGTTTCCTGCTGTAAAGCCAGGGTAGCTGCATGCACTGGCATTTGAACAGGGTGAGACAGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 90 bp AATGGCACAAGAAATCCTCACTGCTTCACAGTGCCCTTCCTTCCGTaGTACTGTGTGGCCAAGAAGTACACTTCTGATGACTCTTTCCTG +
Preference number: 1 (lower is better)
Translates to: NGTRNPHCFTVPFLP*YCVAKKYTSDDSFL
Trigger: CAGGAAAGAGTCATCAGAAGTGTACTTCTTGGCCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAGGATTTCTTGTGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR TCA 90 bp ACCTACGGTGCAAGCACTACATGGAATAGGATGAAACTTTCCCAATaGCGACAGTGTCTTCAGTTGCATGGGCGGTTGGCTGATCTCATT +
Preference number: 1 (lower is better)
Translates to: TYGASTTWNRMKLSQ*RQCLQLHGRLADLI
Trigger: AATGAGATCAGCCAACCGCCCATGCAACTGAAGACACTGTCGTCATTGGGAAAGTTTCATCCTATTCCATGTAGTGCTTGCACCGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR TCA 90 bp GAGCTGGTTAAAGAACCTACGGTGCAAGCACTACATGGAATAGGATaGAACTTTCCCAATGACGACAGTGTCTTCAGTTGCATGGGCGGT +
Preference number: 1 (lower is better)
Translates to: ELVKEPTVQALHGIG*NFPNDDSVFSCMGG
Trigger: ACCGCCCATGCAACTGAAGACACTGTCGTCATTGGGAAAGTTTCATCCTATTCCATGTAGTGCTTGCACCGTAGGTTCTTTAACCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR GCA 90 bp AAAGGAGCTAATGACCATTATGAAAATGGCACAAGAAATCCTCACTaGTTCACAGTGCCCTTCCTTCCGTGGTACTGTGTGGCCAAGAAG +
Preference number: 1 (lower is better)
Translates to: KGANDHYENGTRNPH*FTVPFLPWYCVAKK
Trigger: CTTCTTGGCCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAGGATTTCTTGTGCCATTTTCATAATGGTCATTAGCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR GCA 90 bp CCAGACACTGATATAAATTTCCAGCAAAAACCAAAGCAGACCCACTaGCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGG +
Preference number: 1 (lower is better)
Translates to: PDTDINFQQKPKQTH*LDKFRPYVFPNCSG
Trigger: CCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTGCTGGAAATTTATATCAGTGTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR TCA 90 bp TGCTTGCTTTGGCAATTACATTTATGTTCTTGGGAGCCCAGACACTaGTATAAATTTCCAGCAAAAACCAAAGCAGACCCACTGCCTGGA +
Preference number: 1 (lower is better)
Translates to: CLLWQLHLCSWEPRH*YKFPAKTKADPLPG
Trigger: TCCAGGCAGTGGGTCTGCTTTGGTTTTTGCTGGAAATTTATATCAGTGTCTGGGCTCCCAAGAACATAAATGTAATTGCCAAAGCAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242257.14
3UTR TCA 90 bp GTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATGCGTaGATTGCTATATTGTTCACCAGAAAGACAGAAGTTAATCCCCAG +
Preference number: 1 (lower is better)
Translates to: VFPNCSGNFCCLKNA*IAILFTRKTEVNPQ
Trigger: CTGGGGATTAACTTCTGTCTTTCTGGTGAACAATATAGCAATTCACGCATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR TCA 90 bp TCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTaGAGAATGCGTGAATTGCTATATTGTTCACCAGAAAGACAGAAG +
Preference number: 1 (lower is better)
Translates to: SDHTSSLIVPGTFAA*RMRELLYCSPERQK
Trigger: CTTCTGTCTTTCTGGTGAACAATATAGCAATTCACGCATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR TCA 90 bp ACTTTCCCAATGACGACAGTGTCTTCAGTTGCATGGGCGGTTGGCTaGTCTCATTATTCAGGAGAACCTTTTTATATAGAAAATCTTACT +
Preference number: 1 (lower is better)
Translates to: TFPMTTVSSVAWAVG*SHYSGEPFYIENLT
Trigger: AGTAAGATTTTCTATATAAAAAGGTTCTCCTGAATAATGAGATCAGCCAACCGCCCATGCAACTGAAGACACTGTCGTCATTGGGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR CCA 90 bp CGCAAACCAGCAGCGAGGCAGATGTGCAGATCCAGGGGGCCAGCATTCCATTTCACGGAGCAGCCCCAGTaGGGCCACCAGGAAAGCCCC +
Preference number: 2 (lower is better)
Translates to: RKPAARQMCRSRGPAFHFTEQPQ*GHQESP
Trigger: GGGGCTTTCCTGGTGGCCCCACTGGGGCTGCTCCGT...GAAATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCGCTGCTGGTTTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR GCA 90 bp CGCAAACCAGCAGCGAGGCAGATGTGCAGATCCAGGGGGCCAGCATTCCATTTCGACAGTGTCTTCAGTTaGATGGGCGGTTGGCTGATC +
Preference number: 2 (lower is better)
Translates to: RKPAARQMCRSRGPAFHFDSVFS*MGGWLI
Trigger: GATCAGCCAACCGCCCATGCAACTGAAGACACTGTC...GAAATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCGCTGCTGGTTTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR GCA 90 bp GATCGCAAACCAGCAGCGAGGCAGATGTGCAGATCCAGGGGGCCAGCATTCCATACTCCCCACTTGTCCTaGTCCATCTCCAAAATCAGC +
Preference number: 2 (lower is better)
Translates to: DRKPAARQMCRSRGPAFHTPHLS*SISKIS
Trigger: GCTGATTTTGGAGATGGAGCAGGACAAGTGGGGAGT...ATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCGCTGCTGGTTTGCGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR GCA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTCTGTTCAAATGCCAGTaGATGCAGCTACCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSLFKCQ*MQLPWL
Trigger: AAGCCAGGGTAGCTGCATGCACTGGCATTTGAACAG...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR GCA 90 bp AAATGGCAAGGATATTCACCACAGCACACGCATCCCAGCCAAAAGCCAAAAGCAGGGCACACCCATCCCTaGCTCGGCGGATTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: KWQGYSPQHTHPSQKPKAGHTHP*LGGFLL
Trigger: CAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCC...TGCTTTTGGCTTTTGGCTGGGATGCGTGTGCTGTGGTGAATATCCTTGCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR CCA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTAGCCACACTAAGAACTaGAAATCTGTGCGTGGTGCT +
Preference number: 2 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSSHTKN*KSVRGA
Trigger: AGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCT...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACCTCTCAGAGCAGGGGTaGAAAGCCTGTTTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYLSEQG*KACLCV
Trigger: CACACACAAACAGGCTTTCCACCCCTGCTCTGAGAG...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CCA 90 bp TCCTGCCAGGAAGCACCTCGAGGATTCTCTGTGAGGTTCTCGGGTCAGTCACGTAGCCACACTAAGAACTaGAAATCTGTGCGTGGTGCT +
Preference number: 2 (lower is better)
Translates to: SCQEAPRGFSVRFSGQSRSHTKN*KSVRGA
Trigger: AGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCT...ACGTGACTGACCCGAGAACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR CCA 90 bp CATTCTGGAATTCCTCTGTCAGTCTCCTCTGTAACCGACGGCTTTGACTTCCAGGGAACCCTGTGGCATTaGGCGCCATGTCGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: HSGIPLSVSSVTDGFDFQGTLWH*APCRSE
Trigger: TTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCC...CTGGAAGTCAAAGCCGTCGGTTACAGAGGAGACTGACAGAGGAATTCCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR TCA 90 bp TGTGAAGAAGATCTACCCCAAGCACGAAGCCAACAGGAGAGCTGGGATCGCAAAAGCCAAAAGCAACCTTaGTGCCACAGTGAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: CEEDLPQARSQQESWDRKSQKQP*CHSEGA
Trigger: AGCTCCCTCACTGTGGCATCAAGGTTGCTTTTGGCT...TTTGCGATCCCAGCTCTCCTGTTGGCTTCGTGCTTGGGGTAGATCTTCTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR TCA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTTGCTTGAAGAATGCGTaGATTGCTATATTGTTCACC +
Preference number: 2 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSCLKNA*IAILFT
Trigger: GGTGAACAATATAGCAATTCACGCATTCTTCAAGCA...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR TCA 90 bp TGTGAAGAAGATCTACCCCAAGCACGAAGCCAACAGGAGAGCTGGGATCGCAAAGCATGGGCGGTTGGCTaGTCTCATTATTCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: CEEDLPQARSQQESWDRKAWAVG*SHYSGE
Trigger: TTCTCCTGAATAATGAGATCAGCCAACCGCCCATGC...TTTGCGATCCCAGCTCTCCTGTTGGCTTCGTGCTTGGGGTAGATCTTCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR GCA 90 bp CCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTGAAATCTGTGCGTGGTaGTCTCAGAGCAGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: PTAWINSDHTSSLIVPGTEICAW*SQSRGG
Trigger: TCCACCCCTGCTCTGAGAGCACCACGCACAGATTTC...AGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACAGCCACACTAAGAACTaGAAATCTGTGCGTGGTGCT +
Preference number: 2 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYSHTKN*KSVRGA
Trigger: AGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCT...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CCA 90 bp CACAAGAAATCCTCACTGCTTCACAGTGCCCTTCCTTCCGTGGTACTGTGTGGCAGCAGACCCACTGCCTaGATAAATTCAGACCATACG +
Preference number: 2 (lower is better)
Translates to: HKKSSLLHSALPSVVLCGSRPTA*INSDHT
Trigger: CGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCT...GCCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAGGATTTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR CCA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTAGCAGGAAACATAAATaGCAAGGATATTCACCACAG +
Preference number: 2 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSSRKHK*QGYSPQ
Trigger: CTGTGGTGAATATCCTTGCCATTTATGTTTCCTGCT...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR TCA 90 bp CCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTCGGCGGATTCCTTCTaGTCCTTCCCACAGTCTGTT +
Preference number: 2 (lower is better)
Translates to: PTAWINSDHTSSLIVPGTSADSF*SFPQSV
Trigger: AACAGACTGTGGGAAGGATCAGAAGGAATCCGCCGA...AGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR GCA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATGGGCACACCCATCCCTaGCTCGGCGGATTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHGHTHP*LGGFLL
Trigger: CAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCC...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CCA 90 bp AGAATCACATCTGCTCTCCTGCCAGGAAGCACCTCGAGGATTCTCTGTGAGGTTTGCATGCAGCTACCCTaGCTTTACAGCAGGAAACAT +
Preference number: 2 (lower is better)
Translates to: RITSALLPGSTSRILCEVCMQLP*LYSRKH
Trigger: ATGTTTCCTGCTGTAAAGCCAGGGTAGCTGCATGCA...AACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGAGAGCAGATGTGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR GCA 90 bp CCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTACTCCCCACTTGTCCTaGTCCATCTCCAAAATCAGC +
Preference number: 2 (lower is better)
Translates to: PTAWINSDHTSSLIVPGTTPHLS*SISKIS
Trigger: GCTGATTTTGGAGATGGAGCAGGACAAGTGGGGAGT...AGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CCA 90 bp CAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTCTCTCAGAGCAGGGGTaGAAAGCCTGTTTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: QKPKQTHCLDKFRPYVFPLSEQG*KACLCV
Trigger: CACACACAAACAGGCTTTCCACCCCTGCTCTGAGAG...AGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CCA 90 bp CACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTCTGGAAATCTGTGCGTaGTGCTCTCAGAGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: HCLDKFRPYVFPNCSGNFLEICA*CSQSRG
Trigger: ACCCCTGCTCTGAGAGCACCACGCACAGATTTCCAG...AAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR TCA 90 bp AGAATCACATCTGCTCTCCTGCCAGGAAGCACCTCGAGGATTCTCTGTGAGGTTCTACATGGAATAGGATaGAACTTTCCCAATGACGAC +
Preference number: 2 (lower is better)
Translates to: RITSALLPGSTSRILCEVLHGIG*NFPNDD
Trigger: GTCGTCATTGGGAAAGTTTCATCCTATTCCATGTAG...AACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGAGAGCAGATGTGATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR GCA 90 bp ACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGAAATCTGTGCGTGGTaGTCTCAGAGCAGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: TAWINSDHTSSLIVPGTFEICAW*SQSRGG
Trigger: TCCACCCCTGCTCTGAGAGCACCACGCACAGATTTC...AAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATCTGGAAATCTGTGCGTaGTGCTCTCAGAGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNLEICA*CSQSRG
Trigger: ACCCCTGCTCTGAGAGCACCACGCACAGATTTCCAG...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR TCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATTCGGCGGATTCCTTCTaGTCCTTCCCACAGTCTGTT +
Preference number: 2 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNSADSF*SFPQSV
Trigger: AACAGACTGTGGGAAGGATCAGAAGGAATCCGCCGA...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR TCA 90 bp TCACCACAGCACACGCATCCCAGCCAAAAGCCAAAAGCAACCTTGATGCCACAGAAGATACAAAACAGATaGAAACTGTGTCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: SPQHTHPSQKPKATLMPQKIQNR*KLCLSF
Trigger: GAAGCTGAGACACAGTTTTCATCTGTTTTGTATCTT...CTGTGGCATCAAGGTTGCTTTTGGCTTTTGGCTGGGATGCGTGTGCTGTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR GCA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATGAAATCTGTGCGTGGTaGTCTCAGAGCAGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHEICAW*SQSRGG
Trigger: TCCACCCCTGCTCTGAGAGCACCACGCACAGATTTC...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR GCA 90 bp ACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTCTCACCCTGTTCAAATaGCAGTGCATGCAGCTACCC +
Preference number: 2 (lower is better)
Translates to: TAWINSDHTSSLIVPGTFLTLFK*QCMQLP
Trigger: GGGTAGCTGCATGCACTGGCATTTGAACAGGGTGAG...AAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR CCA 90 bp CCCAGATTTTCTACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTCTCTCAGAGCAGGGGTaGAAAGCCTGTTTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: PRFSTLNSHTKNWKSVRGLSEQG*KACLCV
Trigger: CACACACAAACAGGCTTTCCACCCCTGCTCTGAGAG...ACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGTAGAAAATCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CCA 90 bp CACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTAGCCTTCTAAAGCCCTaGGTTTACAGGCATGAGTGG +
Preference number: 2 (lower is better)
Translates to: HCLDKFRPYVFPNCSGNFSLLKP*VYRHEW
Trigger: CCACTCATGCCTGTAAACCCAGGGCTTTAGAAGGCT...AAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR GCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATACTCCCCACTTGTCCTaGTCCATCTCCAAAATCAGC +
Preference number: 2 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNTPHLS*SISKIS
Trigger: GCTGATTTTGGAGATGGAGCAGGACAAGTGGGGAGT...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR GCA 90 bp CACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTCAAATGCCAGTGCATaGAGCTACCCTGGCTTTACA +
Preference number: 2 (lower is better)
Translates to: HCLDKFRPYVFPNCSGNFSNASA*SYPGFT
Trigger: TGTAAAGCCAGGGTAGCTGCATGCACTGGCATTTGA...AAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR TCA 90 bp CACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTTGAAGAATGCGTaGATTGCTATATTGTTCACC +
Preference number: 2 (lower is better)
Translates to: HCLDKFRPYVFPNCSGNFCLKNA*IAILFT
Trigger: GGTGAACAATATAGCAATTCACGCATTCTTCAAGCA...AAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR GCA 90 bp TCCAGCAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTGAAGAATGCGTGAATTaGTATATTGTTCACCAGAAA +
Preference number: 2 (lower is better)
Translates to: SSKNQSRPTAWINSDHTSEECVN*YIVHQK
Trigger: TTTCTGGTGAACAATATAGCAATTCACGCATTCTTC...AGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTGCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR CCA 72 bp GAAGCCTCTTCTAGGTTCCGGACGGAGCAGCCCCAGTaGGGCCACCAGGAAAGCCCCAGGGCTTATGCGACT +
Preference number: 3 (lower is better)
Translates to: EASSRFRTEQPQ*GHQESPRAYAT
Trigger: AGTCGCATAAGCCCTGGGGCTTTCCTGGTGGCCCCACTGGGGCTGCTCCGTCCGGAACCTAGAAGAGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR TCA 72 bp CTGAGAAGGGTCAGGCACAGGCTGATGAGCCTGTCATaGTCGAGGTCCCGGAACCCTGTGGCATTGGGCGCC +
Preference number: 3 (lower is better)
Translates to: LRRVRHRLMSLS*SRSRNPVALGA
Trigger: GGCGCCCAATGCCACAGGGTTCCGGGACCTCGATCATGACAGGCTCATCAGCCTGTGCCTGACCCTTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR TCA 72 bp TGCTCTCCTGCCAGGAAGCACCTCGAGGATTCTCTGTaGGGTTCTCGGGTCAGTCACGTCAGCAGGGCACAG +
Preference number: 3 (lower is better)
Translates to: CSPARKHLEDSL*GSRVSHVSRAQ
Trigger: CTGTGCCCTGCTGACGTGACTGACCCGAGAACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR GCA 72 bp AAGTCCCGTCAAGGCACACATGGGCACACCCATCCCTaGCTCGGCGGATTCCTTCTGATCCTTCCCACAGTC +
Preference number: 3 (lower is better)
Translates to: KSRQGTHGHTHP*LGGFLLILPTV
Trigger: GACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGTGTGCCTTGACGGGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR CCA 72 bp GCCTGTCATGATCGAGGTCCCGGAACCCTGTGGCATTaGGCGCCATGTCGCTCAGAATCACATCTGCTCTCC +
Preference number: 3 (lower is better)
Translates to: ACHDRGPGTLWH*APCRSESHLLS
Trigger: GGAGAGCAGATGTGATTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCGGGACCTCGATCATGACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR CAA 90 bp CGCAAACCAGCAGCGAGGCAGATGTGCAGATCCAGGGGGCCAGCATTCCATTTCGTATTTGGGAGAGACTaGGGAGAGCTCTGGGTGGAC +
Preference number: 3 (lower is better)
Translates to: RKPAARQMCRSRGPAFHFVFGRD*GELWVD
Trigger: GTCCACCCAGAGCTCTCCCAAGTCTCTCCCAAATAC...GAAATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCGCTGCTGGTTTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR CAA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTTTGTTCCGGGAACTTTaGCTGCTTGAAGAATGCGTG +
Preference number: 3 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSLFREL*LLEECV
Trigger: CACGCATTCTTCAAGCAGCAAAAGTTCCCGGAACAA...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CAA 90 bp AAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTCGGAACCCTGTGGCATaGGGCGCCATGTCGCTCAGA +
Preference number: 3 (lower is better)
Translates to: KREREKERERLPTCPAPSRNPVA*GAMSLR
Trigger: TCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCG...AGATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR CAA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACAGAGAGACTCCCCACTaGTCCTGCTCCATCTCCAAA +
Preference number: 3 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYRETPH*SCSISK
Trigger: TTTGGAGATGGAGCAGGACAAGTGGGGAGTCTCTCT...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CAA 90 bp CACAAGAAATCCTCACTGCTTCACAGTGCCCTTCCTTCCGTGGTACTGTGTGGCAGAGAGACTCCCCACTaGTCCTGCTCCATCTCCAAA +
Preference number: 3 (lower is better)
Translates to: HKKSSLLHSALPSVVLCGRETPH*SCSISK
Trigger: TTTGGAGATGGAGCAGGACAAGTGGGGAGTCTCTCT...GCCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAGGATTTCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 72 bp CTAAGGTATTTGGGAGAGACTTGGGAGAGCTCTGGGTaGACTGTCTCACCCTGTTCAAATGCCAGTGCATGC +
Preference number: 3 (lower is better)
Translates to: LRYLGETWESSG*TVSPCSNASAC
Trigger: GCATGCACTGGCATTTGAACAGGGTGAGACAGTCCACCCAGAGCTCTCCCAAGTCTCTCCCAAATACCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR CAA 90 bp TCACCACAGCACACGCATCCCAGCCAAAAGCCAAAAGCAACCTTGATGCCACAGCAGTTGCATGGGCGGTaGGCTGATCTCATTATTCAG +
Preference number: 3 (lower is better)
Translates to: SPQHTHPSQKPKATLMPQQLHGR*ADLIIQ
Trigger: CTGAATAATGAGATCAGCCAACCGCCCATGCAACTG...CTGTGGCATCAAGGTTGCTTTTGGCTTTTGGCTGGGATGCGTGTGCTGTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR GCA 72 bp TCTCGGGTCAGTCACGTCAGCAGGGCACAGAAAAGTTaGTCCTTCCAGGGGGAATATGTGAAGAAGATCTAC +
Preference number: 3 (lower is better)
Translates to: SRVSHVSRAQKS*SFQGEYVKKIY
Trigger: GTAGATCTTCTTCACATATTCCCCCTGGAAGGAGCAACTTTTCTGTGCCCTGCTGACGTGACTGACCCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 72 bp TACTCTAAGGTATTTGGGAGAGACTTGGGAGAGCTCTaGGTGGACTGTCTCACCCTGTTCAAATGCCAGTGC +
Preference number: 3 (lower is better)
Translates to: YSKVFGRDLGEL*VDCLTLFKCQC
Trigger: GCACTGGCATTTGAACAGGGTGAGACAGTCCACCCAGAGCTCTCCCAAGTCTCTCCCAAATACCTTAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 72 bp ACTGCTTCACAGTGCCCTTCCTTCCGTGGTACTGTGTaGCCAAGAAGTACACTTCTGATGACTCTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: TASQCPSFRGTV*PRSTLLMTLSC
Trigger: GCAGGAAAGAGTCATCAGAAGTGTACTTCTTGGCCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR TCA 72 bp AATTCCTCTGTCAGTCTCCTCTGTAACCGACGGCTTTaGCTTCCAGCCCAGGTTTTACAAAGGAATGTCCCC +
Preference number: 3 (lower is better)
Translates to: NSSVSLLCNRRL*LPAQVLQRNVP
Trigger: GGGGACATTCCTTTGTAAAACCTGGGCTGGAAGTCAAAGCCGTCGGTTACAGAGGAGACTGACAGAGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR GCA 72 bp GAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTaGTCCATCTCCAAAATCAGCTCAAATCTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: ERERERETPHLS*SISKISSNLPG
Trigger: TCCTGGGAGATTTGAGCTGATTTTGGAGATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR GCA 72 bp GGGTGGACTGTCTCACCCTGTTCAAATGCCAGTGCATaGAGCTACCCTGGCTTTACAGCAGGAAACATAAAT +
Preference number: 3 (lower is better)
Translates to: GWTVSPCSNASA*SYPGFTAGNIN
Trigger: ATTTATGTTTCCTGCTGTAAAGCCAGGGTAGCTGCATGCACTGGCATTTGAACAGGGTGAGACAGTCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 72 bp ATGCAGCTACCCTGGCTTTACAGCAGGAAACATAAATaGCAAGGATATTCACCACAGCACACGCATCCCAGC +
Preference number: 3 (lower is better)
Translates to: MQLPWLYSRKHK*QGYSPQHTHPS
Trigger: GCTGGGATGCGTGTGCTGTGGTGAATATCCTTGCCATTTATGTTTCCTGCTGTAAAGCCAGGGTAGCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 72 bp AGAAATCCTCACTGCTTCACAGTGCCCTTCCTTCCGTaGTACTGTGTGGCCAAGAAGTACACTTCTGATGAC +
Preference number: 3 (lower is better)
Translates to: RNPHCFTVPFLP*YCVAKKYTSDD
Trigger: GTCATCAGAAGTGTACTTCTTGGCCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAGGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR TCA 72 bp GCAAGCACTACATGGAATAGGATGAAACTTTCCCAATaGCGACAGTGTCTTCAGTTGCATGGGCGGTTGGCT +
Preference number: 3 (lower is better)
Translates to: ASTTWNRMKLSQ*RQCLQLHGRLA
Trigger: AGCCAACCGCCCATGCAACTGAAGACACTGTCGTCATTGGGAAAGTTTCATCCTATTCCATGTAGTGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 72 bp CCCAGATTTTCTACTTTAAACAGCCACACTAAGAACTaGAAATCTGTGCGTGGTGCTCTCAGAGCAGGGGTG +
Preference number: 3 (lower is better)
Translates to: PRFSTLNSHTKN*KSVRGALRAGV
Trigger: CACCCCTGCTCTGAGAGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGTAGAAAATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR-3UTR CAA 90 bp CACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTAGAGAGACTCCCCACTaGTCCTGCTCCATCTCCAAA +
Preference number: 3 (lower is better)
Translates to: HCLDKFRPYVFPNCSGNFRETPH*SCSISK
Trigger: TTTGGAGATGGAGCAGGACAAGTGGGGAGTCTCTCT...AAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR CCA 72 bp CTCACCCTGTTCAAATGCCAGTGCATGCAGCTACCCTaGCTTTACAGCAGGAAACATAAATGGCAAGGATAT +
Preference number: 3 (lower is better)
Translates to: LTLFKCQCMQLP*LYSRKHKWQGY
Trigger: ATATCCTTGCCATTTATGTTTCCTGCTGTAAAGCCAGGGTAGCTGCATGCACTGGCATTTGAACAGGGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR TCA 72 bp GGGCCAGCATTCCATTTCTGCACTTTCAACAAGTCATaGAACCCTGAGCCTGTTTTCTCACCAATAAATGGG +
Preference number: 3 (lower is better)
Translates to: GPAFHFCTFNKS*NPEPVFSPING
Trigger: CCCATTTATTGGTGAGAAAACAGGCTCAGGGTTTCATGACTTGTTGAAAGTGCAGAAATGGAATGCTGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR-3UTR CAA 90 bp AGGATATTCACCACAGCACACGCATCCCAGCCAAAAGCCAAAAGCAACCTTGATAATTTAGCTGTGCTGTaGGGGAAAGATGTCAATACA +
Preference number: 3 (lower is better)
Translates to: RIFTTAHASQPKAKSNLDNLAVL*GKDVNT
Trigger: TGTATTGACATCTTTCCCCAACAGCACAGCTAAATT...ATCAAGGTTGCTTTTGGCTTTTGGCTGGGATGCGTGTGCTGTGGTGAATATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR TCA 72 bp AAAGAACCTACGGTGCAAGCACTACATGGAATAGGATaGAACTTTCCCAATGACGACAGTGTCTTCAGTTGC +
Preference number: 3 (lower is better)
Translates to: KEPTVQALHGIG*NFPNDDSVFSC
Trigger: GCAACTGAAGACACTGTCGTCATTGGGAAAGTTTCATCCTATTCCATGTAGTGCTTGCACCGTAGGTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR CCA 72 bp CCCAATGACGACAGTGTCTTCAGTTGCATGGGCGGTTaGCTGATCTCATTATTCAGGAGAACCTTTTTATAT +
Preference number: 3 (lower is better)
Translates to: PNDDSVFSCMGG*LISLFRRTFLY
Trigger: ATATAAAAAGGTTCTCCTGAATAATGAGATCAGCCAACCGCCCATGCAACTGAAGACACTGTCGTCATTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR TCA 72 bp ACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTaGAGAATGCGTGAATTGCTATATTGTTCACCAGAA +
Preference number: 3 (lower is better)
Translates to: TSSLIVPGTFAA*RMRELLYCSPE
Trigger: TTCTGGTGAACAATATAGCAATTCACGCATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR TCA 72 bp ATGACGACAGTGTCTTCAGTTGCATGGGCGGTTGGCTaGTCTCATTATTCAGGAGAACCTTTTTATATAGAA +
Preference number: 3 (lower is better)
Translates to: MTTVSSVAWAVG*SHYSGEPFYIE
Trigger: TTCTATATAAAAAGGTTCTCCTGAATAATGAGATCAGCCAACCGCCCATGCAACTGAAGACACTGTCGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
3UTR GCA 72 bp GATATAAATTTCCAGCAAAAACCAAAGCAGACCCACTaGCTGGATAAATTCAGACCATACGTCTTCCCTAAT +
Preference number: 3 (lower is better)
Translates to: DINFQQKPKQTH*LDKFRPYVFPN
Trigger: ATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTGCTGGAAATTTATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp GCCATGAAGCCTCTTCTAGGTTCCGGACGGAGCAGCCCCAGTGGGGCCACCAGGCAGGTAGGCAGAGGTTaGAGTGAGCCGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: AMKPLLGSGRSSPSGATRQVGRG*SEPRSH
Trigger: GTGTGATCTCGGCTCACTGCAACCTCTGCCTACCTG...CCTGGTGGCCCCACTGGGGCTGCTCCGTCCGGAACCTAGAAGAGGCTTCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTCCGGGCCGCAGAATCTaGTGCCTCTCGTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSPGRRI*CLSFTS
Trigger: GGAGGTGAACGAGAGGCACCAGATTCTGCGGCCCGG...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp CACAAGAAATCCTCACTGCTTCACAGTGCCCTTCCTTCCGTGGTACTGTGTGGCACGGAGCAGCCCCAGTaGGGCCACCAGGAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: HKKSSLLHSALPSVVLCGTEQPQ*GHQESP
Trigger: GGGGCTTTCCTGGTGGCCCCACTGGGGCTGCTCCGT...GCCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAGGATTTCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACTTCTGCACCGCCACCTaGCTCCAGGCCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYFCTAT*LQAPGA
Trigger: AGCTCCTGGGGCCTGGAGTCAGGTGGCGGTGCAGAA...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACCTGTGCCTGCGGCGTTaGCCTTCTGCACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYLCLRR*PSAPPP
Trigger: AGGTGGCGGTGCAGAAGGTCAACGCCGCAGGCACAG...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp CGAGGTCCCGGAACCCTGTGGCATTGGGCGCCATGTCGCTCAGAATCACATCTGCTCGAGGATTCTCTGTaGGGTTCTCGGGTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RGPGTLWHWAPCRSESHLLEDSL*GSRVSH
Trigger: GTGACTGACCCGAGAACCTCACAGAGAATCCTCGAG...CAGATGTGATTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCGGGACCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTGGAACCCTGTGGCATTaGGCGCCATGTCGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSGTLWH*APCRSE
Trigger: TTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCC...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACGGTCCCGGAACCCTGTaGCATTGGGCGCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYGPGTL*HWAPCR
Trigger: GCGACATGGCGCCCAATGCCACAGGGTTCCGGGACC...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp CACAAGAAATCCTCACTGCTTCACAGTGCCCTTCCTTCCGTGGTACTGTGTGGCGGTCCCGGAACCCTGTaGCATTGGGCGCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: HKKSSLLHSALPSVVLCGGPGTL*HWAPCR
Trigger: GCGACATGGCGCCCAATGCCACAGGGTTCCGGGACC...GCCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAGGATTTCTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp CGAGGTCCCGGAACCCTGTGGCATTGGGCGCCATGTCGCTCAGAATCACATCTGCTGGAAATCTGTGCGTaGTGCTCTCAGAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: RGPGTLWHWAPCRSESHLLEICA*CSQSRG
Trigger: ACCCCTGCTCTGAGAGCACCACGCACAGATTTCCAG...CAGATGTGATTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCGGGACCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp TCCTGCCAGGAAGCACCTCGAGGATTCTCTGTGAGGTTCTCGGGTCAGTCACGTCTGATGAGCCTGTCATaGTCGAGGTCCCGGAACCCT +
Preference number: 4 (lower is better)
Translates to: SCQEAPRGFSVRFSGQSRLMSLS*SRSRNP
Trigger: AGGGTTCCGGGACCTCGATCATGACAGGCTCATCAG...ACGTGACTGACCCGAGAACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp CGAGGTCCCGGAACCCTGTGGCATTGGGCGCCATGTCGCTCAGAATCACATCTGCTCACTGCTTCACAGTaGCCTTCCTTCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: RGPGTLWHWAPCRSESHLLTASQ*PSFRGT
Trigger: AGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAG...CAGATGTGATTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCGGGACCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp TCCTGCCAGGAAGCACCTCGAGGATTCTCTGTGAGGTTCTCGGGTCAGTCACGTGACTCCATCTGTGCCTaGGGCGTTGACCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: SCQEAPRGFSVRFSGQSRDSICA*GVDLLH
Trigger: GTGCAGAAGGTCAACGCCGCAGGCACAGATGGAGTC...ACGTGACTGACCCGAGAACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp CGAGGTCCCGGAACCCTGTGGCATTGGGCGCCATGTCGCTCAGAATCACATCTGTGTAACCGACGGCTTTaGCTTCCAGCCCAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: RGPGTLWHWAPCRSESHLCNRRL*LPAQVL
Trigger: TAAAACCTGGGCTGGAAGTCAAAGCCGTCGGTTACA...CAGATGTGATTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCGGGACCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp CGCAAACCAGCAGCGAGGCAGATGTGCAGATCCAGGGGGCCAGCATTCCATTTCTCGGCGGATTCCTTCTaGTCCTTCCCACAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RKPAARQMCRSRGPAFHFSADSF*SFPQSV
Trigger: AACAGACTGTGGGAAGGATCAGAAGGAATCCGCCGA...GAAATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCGCTGCTGGTTTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp CGAGGTCCCGGAACCCTGTGGCATTGGGCGCCATGTCGCTCAGAATCACATCTGACCTTGATGCCACAGTaGGGGAGCTGGTTAAAGAAC +
Preference number: 4 (lower is better)
Translates to: RGPGTLWHWAPCRSESHLTLMPQ*GSWLKN
Trigger: GTTCTTTAACCAGCTCCCTCACTGTGGCATCAAGGT...CAGATGTGATTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCGGGACCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp CGAGGCAGATGTGCAGATCCAGGGGGCCAGCATTCCATTTCTGCACTTTCAACAGGCCGCAGAATCTGGTaGCTCTCGTTCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGRCADPGGQHSISALSTGRRIW*LSFTSR
Trigger: CCTGGAGGTGAACGAGAGGCACCAGATTCTGCGGCC...TGTTGAAAGTGCAGAAATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTCTCTCAGAGCAGGGGTaGAAAGCCTGTTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSLSEQG*KACLCV
Trigger: CACACACAAACAGGCTTTCCACCCCTGCTCTGAGAG...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp AAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTTCTGCACCGCCACCTaGCTCCAGGCCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KKRERERERETPHLSCSIFCTAT*LQAPGA
Trigger: AGCTCCTGGGGCCTGGAGTCAGGTGGCGGTGCAGAA...GATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACGGAACCCTGTGGCATTaGGCGCCATGTCGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYGTLWH*APCRSE
Trigger: TTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCC...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACAGCCAACAGGAGAGCTaGGATCGCAAACCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYSQQES*DRKPAA
Trigger: CGCTGCTGGTTTGCGATCCCAGCTCTCCTGTTGGCT...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp AAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTGTCTGGGGTCACGCTaGGAAGGGTCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: KKRERERERETPHLSCSICLGSR*EGSGTG
Trigger: GCCTGTGCCTGACCCTTCTCAGCGTGACCCCAGACA...GATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp TCCTGCCAGGAAGCACCTCGAGGATTCTCTGTGAGGTTCTCGGGTCAGTCACGTTGCCCAGGTTGGTCTTaGACTCCTGACTTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SCQEAPRGFSVRFSGQSRCPGWS*TPDFKQ
Trigger: TTGCTTGAAGTCAGGAGTTCAAGACCAACCTGGGCA...ACGTGACTGACCCGAGAACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp GTTAAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCCGGGTCAGCCACAGGTaGTCAGCGCCTGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: VKKRERERERETPHLSCSRVSHR*SAPVRF
Trigger: GAATCGGACAGGCGCTGAGCACCTGTGGCTGACCCG...GGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTCCAAAGCAGACCCACTaGCTGGATAAATTCAGACCA +
Preference number: 4 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSPKQTH*LDKFRP
Trigger: TGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGG...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp AAATGGCAAGGATATTCACCACAGCACACGCATCCCAGCCAAAAGCCAAAAGCAGCAGCGAGGCAGATGTaGAGATCCAGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KWQGYSPQHTHPSQKPKAAARQM*RSRGPA
Trigger: TGCTGGCCCCCTGGATCTGCACATCTGCCTCGCTGC...TGCTTTTGGCTTTTGGCTGGGATGCGTGTGCTGTGGTGAATATCCTTGCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACCGCAGCCTTCACAAATaGGTCCCTGAGATGTCGGGT +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYRSLHK*VPEMSG
Trigger: ACCCGACATCTCAGGGACCCATTTGTGAAGGCTGCG...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACAGGTTGCAGGATGTCTaGGGTCACGCTGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYRLQDV*GHAEKG
Trigger: ACCCTTCTCAGCGTGACCCCAGACATCCTGCAACCT...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp GATCGCAAACCAGCAGCGAGGCAGATGTGCAGATCCAGGGGGCCAGCATTCCATTTCCGTGGTACTGTGTaGCCAAGAAGTACACTTCTG +
Preference number: 4 (lower is better)
Translates to: DRKPAARQMCRSRGPAFHFRGTV*PRSTLL
Trigger: CAGAAGTGTACTTCTTGGCCACACAGTACCACGGAA...ATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCGCTGCTGGTTTGCGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACGTGCCCTTCCTTCCGTaGTACTGTGTGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYVPFLP*YCVAKK
Trigger: CTTCTTGGCCACACAGTACCACGGAAGGAAGGGCAC...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp CGCAAACCAGCAGCGAGGCAGATGTGCAGATCCAGGGGGCCAGCATTCCATTTCAGTTGCATGGGCGGTTaGCTGATCTCATTATTCAGG +
Preference number: 4 (lower is better)
Translates to: RKPAARQMCRSRGPAFHFSCMGG*LISLFR
Trigger: CCTGAATAATGAGATCAGCCAACCGCCCATGCAACT...GAAATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCGCTGCTGGTTTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTTGCATGCAGCTACCCTaGCTTTACAGCAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSCMQLP*LYSRKH
Trigger: ATGTTTCCTGCTGTAAAGCCAGGGTAGCTGCATGCA...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp AAATGGCAAGGATATTCACCACAGCACACGCATCCCAGCCAAAAGCCAAAAGCATCACCTCCAGGAGCTTaGAGGCGCTTCGACACCGGT +
Preference number: 4 (lower is better)
Translates to: KWQGYSPQHTHPSQKPKASPPGA*RRFDTG
Trigger: ACCGGTGTCGAAGCGCCTTCAAGCTCCTGGAGGTGA...TGCTTTTGGCTTTTGGCTGGGATGCGTGTGCTGTGGTGAATATCCTTGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp CAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTTGTCTGGGGTCACGCTaGGAAGGGTCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: QKPKQTHCLDKFRPYVFPCLGSR*EGSGTG
Trigger: GCCTGTGCCTGACCCTTCTCAGCGTGACCCCAGACA...AGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp GGGGAAAGATGTCAATACATCATTAAGAGTAGCCGGGCACCATGGCTCACATCTCAGCCTGGGCAAGAGTaGGACTCCATCTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GERCQYIIKSSRAPWLTSQPGQE*DSICAC
Trigger: GCAGGCACAGATGGAGTCTCACTCTTGCCCAGGCTG...AGATGTGAGCCATGGTGCCCGGCTACTCTTAATGATGTATTGACATCTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp GTTAAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCGGCCGCAGAATCTGGTaGCTCTCGTTCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VKKRERERERETPHLSCSGRRIW*LSFTSR
Trigger: CCTGGAGGTGAACGAGAGGCACCAGATTCTGCGGCC...GGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTGCTGGGATCTGTGCCTaGGGCGTTGACCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: PTAWINSDHTSSLIVPGTAGICA*GVDLLH
Trigger: GTGCAGAAGGTCAACGCCGCAGGCACAGATCCCAGC...AGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242257.14
ENST00000440306.3
CDS-3UTR GCA 90 bp AAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCGCTGGGATCTGTGCCTaGGGCGTTGACCTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: KKRERERERETPHLSCSIAGICA*GVDLLH
Trigger: GTGCAGAAGGTCAACGCCGCAGGCACAGATCCCAGC...GATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242257.14
ENST00000440306.3
CDS-3UTR GCA 90 bp TCCAGCAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTGGGCACACCCATCCCTaGCTCGGCGGATTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSKNQSRPTAWINSDHTSGHTHP*LGGFLL
Trigger: CAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCC...AGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTGCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CGAGGCAGATGTGCAGATCCAGGGGGCCAGCATTCCATTTCTGCACTTTCAACACTCACCCTGTTCAAATaGCAGTGCATGCAGCTACCC +
Preference number: 4 (lower is better)
Translates to: RGRCADPGGQHSISALSTLTLFK*QCMQLP
Trigger: GGGTAGCTGCATGCACTGGCATTTGAACAGGGTGAG...TGTTGAAAGTGCAGAAATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp CAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTCAAGTACCCCGCCATTaGTGTTCCCCGCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QKPKQTHCLDKFRPYVFPQVPRH*CSPRLQ
Trigger: CTGCAGGCGCGGGGAACACCAATGGCGGGGTACTTG...AGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242257.14
CDS-3UTR TCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATTTCTGCACCGCCACCTaGCTCCAGGCCCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNFCTAT*LQAPGA
Trigger: AGCTCCTGGGGCCTGGAGTCAGGTGGCGGTGCAGAA...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp ACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTCTGTGCCTGCGGCGTTaGCCTTCTGCACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: TAWINSDHTSSLIVPGTFLCLRR*PSAPPP
Trigger: AGGTGGCGGTGCAGAAGGTCAACGCCGCAGGCACAG...AAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp CACAAGAAATCCTCACTGCTTCACAGTGCCCTTCCTTCCGTGGTACTGTGTGGCTCCAGGGGGAATATGTaGAGAAGATCTACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: HKKSSLLHSALPSVVLCGSRGNM*RRSTPS
Trigger: GCTTGGGGTAGATCTTCTTCACATATTCCCCCTGGA...GCCACACAGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAGGATTTCTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp AGAATCACATCTGCTCTCCTGCCAGGAAGCACCTCGAGGATTCTCTGTGAGGTTAGCCAAAAGCAACCTTaGTGCCACAGTGAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RITSALLPGSTSRILCEVSQKQP*CHSEGA
Trigger: AGCTCCCTCACTGTGGCATCAAGGTTGCTTTTGGCT...AACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGAGAGCAGATGTGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACACTCCCCACTTGTCCTaGTCCATCTCCAAAATCAGC +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYTPHLS*SISKIS
Trigger: GCTGATTTTGGAGATGGAGCAGGACAAGTGGGGAGT...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp CATTCTGGAATTCCTCTGTCAGTCTCCTCTGTAACCGACGGCTTTGACTTCCAGCGCAGCCTTCACAAATaGGTCCCTGAGATGTCGGGT +
Preference number: 4 (lower is better)
Translates to: HSGIPLSVSSVTDGFDFQRSLHK*VPEMSG
Trigger: ACCCGACATCTCAGGGACCCATTTGTGAAGGCTGCG...CTGGAAGTCAAAGCCGTCGGTTACAGAGGAGACTGACAGAGGAATTCCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACAGCCTTCTAAAGCCCTaGGTTTACAGGCATGAGTGG +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYSLLKP*VYRHEW
Trigger: CCACTCATGCCTGTAAACCCAGGGCTTTAGAAGGCT...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp AAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTTCACAAATGGGTCCCTaGGATGTCGGGTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: KREREKERERLPTCPAPSSQMGP*DVGSAT
Trigger: TGTGGCTGACCCGACATCTCAGGGACCCATTTGTGA...AGATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp ACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTGCTCTCAGAGCACTGATGAGCCTGTCATaGTCGAGGTCCCGGAACCCT +
Preference number: 4 (lower is better)
Translates to: TLNSHTKNWKSVRGALRALMSLS*SRSRNP
Trigger: AGGGTTCCGGGACCTCGATCATGACAGGCTCATCAG...TGCTCTGAGAGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATTGTCTGGGGTCACGCTaGGAAGGGTCAGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNCLGSR*EGSGTG
Trigger: GCCTGTGCCTGACCCTTCTCAGCGTGACCCCAGACA...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp AAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCCGCCTGTCCGATTCTTaGAGCGACTCCCAACAGTGT +
Preference number: 4 (lower is better)
Translates to: KKRERERERETPHLSCSIRLSDS*SDSQQC
Trigger: ACACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCG...GATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATCGGGTCAGCCACAGGTaGTCAGCGCCTGTCCGATTC +
Preference number: 4 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYRVSHR*SAPVRF
Trigger: GAATCGGACAGGCGCTGAGCACCTGTGGCTGACCCG...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACAGGGCACAGAAAAGTTaGTCCTTCCAGGGGGAATAT +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYRAQKS*SFQGEY
Trigger: ATATTCCCCCTGGAAGGAGCAACTTTTCTGTGCCCT...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTCACATCTGCTCTCCTaGCAGGAAGCACCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: PTAWINSDHTSSLIVPGTSHLLS*QEAPRG
Trigger: TCCTCGAGGTGCTTCCTGGCAGGAGAGCAGATGTGA...AGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp AAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTCACATCTGCTCTCCTaGCAGGAAGCACCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: KKRERERERETPHLSCSISHLLS*QEAPRG
Trigger: TCCTCGAGGTGCTTCCTGGCAGGAGAGCAGATGTGA...GATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp GTTAAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCGAAATCTGTGCGTGGTaGTCTCAGAGCAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VKKRERERERETPHLSCSEICAW*SQSRGG
Trigger: TCCACCCCTGCTCTGAGAGCACCACGCACAGATTTC...GGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATGGTCCCGGAACCCTGTaGCATTGGGCGCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHGPGTL*HWAPCR
Trigger: GCGACATGGCGCCCAATGCCACAGGGTTCCGGGACC...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp AAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCAGGTTGCAGGATGTCTaGGGTCACGCTGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: KKRERERERETPHLSCSIRLQDV*GHAEKG
Trigger: ACCCTTCTCAGCGTGACCCCAGACATCCTGCAACCT...GATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp AAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTGTGCCCTTCCTTCCGTaGTACTGTGTGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: KREREKERERLPTCPAPSVPFLP*YCVAKK
Trigger: CTTCTTGGCCACACAGTACCACGGAAGGAAGGGCAC...AGATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp GTTAAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCGTGCCCTTCCTTCCGTaGTACTGTGTGGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: VKKRERERERETPHLSCSVPFLP*YCVAKK
Trigger: CTTCTTGGCCACACAGTACCACGGAAGGAAGGGCAC...GGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATTCACCTCCAGGAGCTTaGAGGCGCTTCGACACCGGT +
Preference number: 4 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNSPPGA*RRFDTG
Trigger: ACCGGTGTCGAAGCGCCTTCAAGCTCCTGGAGGTGA...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp CAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTCTCGAGGATTCTCTGTaGGGTTCTCGGGTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: QKPKQTHCLDKFRPYVFPLEDSL*GSRVSH
Trigger: GTGACTGACCCGAGAACCTCACAGAGAATCCTCGAG...AGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp AAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTTCGGCGGATTCCTTCTaGTCCTTCCCACAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: KREREKERERLPTCPAPSSADSF*SFPQSV
Trigger: AACAGACTGTGGGAAGGATCAGAAGGAATCCGCCGA...AGATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATGGCCGCAGAATCTGGTaGCTCTCGTTCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYGRRIW*LSFTSR
Trigger: CCTGGAGGTGAACGAGAGGCACCAGATTCTGCGGCC...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp GTTAAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCCTCACTGCTTCACAGTaGCCTTCCTTCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: VKKRERERERETPHLSCSLTASQ*PSFRGT
Trigger: AGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAG...GGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACACAAGAAATCCTCACTaGTTCACAGTGCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYTRNPH*FTVPFL
Trigger: AAGGAAGGGCACTGTGAAGCAGTGAGGATTTCTTGT...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp AAATGGCAAGGATATTCACCACAGCACACGCATCCCAGCCAAAAGCCAAAAGCAGACAGTGTCTTCAGTTaGATGGGCGGTTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: KWQGYSPQHTHPSQKPKADSVFS*MGGWLI
Trigger: GATCAGCCAACCGCCCATGCAACTGAAGACACTGTC...TGCTTTTGGCTTTTGGCTGGGATGCGTGTGCTGTGGTGAATATCCTTGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTAGCCAACAGGAGAGCTaGGATCTGTGCCTGCGGCGT +
Preference number: 4 (lower is better)
Translates to: TAWINSDHTSSLIVPGTFSQQES*DLCLRR
Trigger: ACGCCGCAGGCACAGATCCCAGCTCTCCTGTTGGCT...AAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242257.14
ENST00000440306.3
CDS-3UTR CCA 90 bp AAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCCTCTCAGAGCAGGGGTaGAAAGCCTGTTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KKRERERERETPHLSCSILSEQG*KACLCV
Trigger: CACACACAAACAGGCTTTCCACCCCTGCTCTGAGAG...GATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp CAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTCTGGAAATCTGTGCGTaGTGCTCTCAGAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: QKPKQTHCLDKFRPYVFPLEICA*CSQSRG
Trigger: ACCCCTGCTCTGAGAGCACCACGCACAGATTTCCAG...AGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
3UTR CAA 72 bp TTCTCGGGTCAGTCACGTCAGCAGGGCACAGAAAAGTaGCTCCTTCCAGGGGGAATATGTGAAGAAGATCTA +
Preference number: 4 (lower is better)
Translates to: FSGQSRQQGTEK*LLPGGICEEDL
Trigger: TAGATCTTCTTCACATATTCCCCCTGGAAGGAGCAACTTTTCTGTGCCCTGCTGACGTGACTGACCCGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp GATAACTTTCTCTTCCCAAATCACAATATAGCGGACTTTTTCATTTTCCATGGCCTGTGCCTGCGGCGTTaGCCTTCTGCACCGCCACCT +
Preference number: 4 (lower is better)
Translates to: DNFLFPNHNIADFFIFHGLCLRR*PSAPPP
Trigger: AGGTGGCGGTGCAGAAGGTCAACGCCGCAGGCACAG...GCCATGGAAAATGAAAAAGTCCGCTATATTGTGATTTGGGAAGAGAAAGTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp AAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTTCCAGGGGGAATATGTaGAGAAGATCTACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: KREREKERERLPTCPAPSSRGNM*RRSTPS
Trigger: GCTTGGGGTAGATCTTCTTCACATATTCCCCCTGGA...AGATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATCTGATGAGCCTGTCATaGTCGAGGTCCCGGAACCCT +
Preference number: 4 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNLMSLS*SRSRNP
Trigger: AGGGTTCCGGGACCTCGATCATGACAGGCTCATCAG...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp GTTAAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCTGTAACCGACGGCTTTaGCTTCCAGCCCAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: VKKRERERERETPHLSCSCNRRL*LPAQVL
Trigger: TAAAACCTGGGCTGGAAGTCAAAGCCGTCGGTTACA...GGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp AAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTGCCCAGGTTGGTCTTaGACTCCTGACTTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: KKRERERERETPHLSCSICPGWS*TPDFKQ
Trigger: TTGCTTGAAGTCAGGAGTTCAAGACCAACCTGGGCA...GATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp ACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTGCTCTCAGAGCACTCACTGCTTCACAGTaGCCTTCCTTCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: TLNSHTKNWKSVRGALRALTASQ*PSFRGT
Trigger: AGTACCACGGAAGGAAGGGCACTGTGAAGCAGTGAG...TGCTCTGAGAGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp GTTCTCGGGTCAGTCACGTCAGCAGGGCACAGAAAAGTTGCTCCTTCCAGGGGGGAAGAATGCGTGAATTaGTATATTGTTCACCAGAAA +
Preference number: 4 (lower is better)
Translates to: VLGSVTSAGHRKVAPSRGEECVN*YIVHQK
Trigger: TTTCTGGTGAACAATATAGCAATTCACGCATTCTTC...CCCCCTGGAAGGAGCAACTTTTCTGTGCCCTGCTGACGTGACTGACCCGAGAAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATAGCCAACAGGAGAGCTaGGATCTGTGCCTGCGGCGT +
Preference number: 4 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHSQQES*DLCLRR
Trigger: ACGCCGCAGGCACAGATCCCAGCTCTCCTGTTGGCT...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242257.14
ENST00000440306.3
CDS-3UTR CCA 90 bp ACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGGAACCCTGTGGCATTaGGCGCCATGTCGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: TAWINSDHTSSLIVPGTFGTLWH*APCRSE
Trigger: TTCTGAGCGACATGGCGCCCAATGCCACAGGGTTCC...AAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGACTTGGGAGAGCTCTaGGTGGACTGTCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: TAWINSDHTSSLIVPGTFDLGEL*VDCLTL
Trigger: CAGGGTGAGACAGTCCACCCAGAGCTCTCCCAAGTC...AAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp AAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTTATTTGGGAGAGACTTaGGAGAGCTCTGGGTGGACT +
Preference number: 4 (lower is better)
Translates to: KREREKERERLPTCPAPSYLGET*ESSGWT
Trigger: AGTCCACCCAGAGCTCTCCCAAGTCTCTCCCAAATA...AGATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR TCA 90 bp CCCAGATTTTCTACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTTCACAAATGGGTCCCTaGGATGTCGGGTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: PRFSTLNSHTKNWKSVRGSQMGP*DVGSAT
Trigger: TGTGGCTGACCCGACATCTCAGGGACCCATTTGTGA...ACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGTAGAAAATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATCTCGAGGATTCTCTGTaGGGTTCTCGGGTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNLEDSL*GSRVSH
Trigger: GTGACTGACCCGAGAACCTCACAGAGAATCCTCGAG...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp TCCAGCAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTTGCCCAGGTTGGTCTTaGACTCCTGACTTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SSKNQSRPTAWINSDHTSCPGWS*TPDFKQ
Trigger: TTGCTTGAAGTCAGGAGTTCAAGACCAACCTGGGCA...AGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp AGGATATTCACCACAGCACACGCATCCCAGCCAAAAGCCAAAAGCAACCTTGATAGGGCACAGAAAAGTTaGTCCTTCCAGGGGGAATAT +
Preference number: 4 (lower is better)
Translates to: RIFTTAHASQPKAKSNLDRAQKS*SFQGEY
Trigger: ATATTCCCCCTGGAAGGAGCAACTTTTCTGTGCCCT...ATCAAGGTTGCTTTTGGCTTTTGGCTGGGATGCGTGTGCTGTGGTGAATATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp CCCAGATTTTCTACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTTCACATCTGCTCTCCTaGCAGGAAGCACCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: PRFSTLNSHTKNWKSVRGSHLLS*QEAPRG
Trigger: TCCTCGAGGTGCTTCCTGGCAGGAGAGCAGATGTGA...ACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGTAGAAAATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTACTCCCCACTTGTCCTaGTCCATCTCCAAAATCAGC +
Preference number: 4 (lower is better)
Translates to: QKPKQTHCLDKFRPYVFPTPHLS*SISKIS
Trigger: GCTGATTTTGGAGATGGAGCAGGACAAGTGGGGAGT...AGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CCCAGATTTTCTACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTGAAATCTGTGCGTGGTaGTCTCAGAGCAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PRFSTLNSHTKNWKSVRGEICAW*SQSRGG
Trigger: TCCACCCCTGCTCTGAGAGCACCACGCACAGATTTC...ACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGTAGAAAATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATGAAATCTGTGCGTGGTaGTCTCAGAGCAGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYEICAW*SQSRGG
Trigger: TCCACCCCTGCTCTGAGAGCACCACGCACAGATTTC...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTCCAAAGCAGACCCACTaGCTGGATAAATTCAGACCA +
Preference number: 4 (lower is better)
Translates to: PTAWINSDHTSSLIVPGTPKQTH*LDKFRP
Trigger: TGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGG...AGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATCCGAGATCACACCATTaGACTGCAGCCTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNPRSHH*TAAWAR
Trigger: TCTTGCCCAGGCTGCAGTGCAATGGTGTGATCTCGG...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp TCCAGCAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTCTGTTCAAATGCCAGTaGATGCAGCTACCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSKNQSRPTAWINSDHTSLFKCQ*MQLPWL
Trigger: AAGCCAGGGTAGCTGCATGCACTGGCATTTGAACAG...AGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp CACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTCTCTCAGAGCAGGGGTaGAAAGCCTGTTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HCLDKFRPYVFPNCSGNFLSEQG*KACLCV
Trigger: CACACACAAACAGGCTTTCCACCCCTGCTCTGAGAG...AAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTGCTCTCAGAGCAAGCCTTCTAAAGCCCTaGGTTTACAGGCATGAGTGG +
Preference number: 4 (lower is better)
Translates to: TLNSHTKNWKSVRGALRASLLKP*VYRHEW
Trigger: CCACTCATGCCTGTAAACCCAGGGCTTTAGAAGGCT...TGCTCTGAGAGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp AAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCAGCAGACCCACTGCCTaGATAAATTCAGACCATACG +
Preference number: 4 (lower is better)
Translates to: KKRERERERETPHLSCSISRPTA*INSDHT
Trigger: CGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCT...GATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp CCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTAGCAGACCCACTGCCTaGATAAATTCAGACCATACG +
Preference number: 4 (lower is better)
Translates to: PTAWINSDHTSSLIVPGTSRPTA*INSDHT
Trigger: CGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCT...AGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATCGCCTGTCCGATTCTTaGAGCGACTCCCAACAGTGT +
Preference number: 4 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHRLSDS*SDSQQC
Trigger: ACACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCG...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp ACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTGCTCTCAGAGCATCAAATGCCAGTGCATaGAGCTACCCTGGCTTTACA +
Preference number: 4 (lower is better)
Translates to: TLNSHTKNWKSVRGALRASNASA*SYPGFT
Trigger: TGTAAAGCCAGGGTAGCTGCATGCACTGGCATTTGA...TGCTCTGAGAGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CCA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATCGCAGCCTTCACAAATaGGTCCCTGAGATGTCGGGT +
Preference number: 4 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHRSLHK*VPEMSG
Trigger: ACCCGACATCTCAGGGACCCATTTGTGAAGGCTGCG...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATAGGTTGCAGGATGTCTaGGGTCACGCTGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHRLQDV*GHAEKG
Trigger: ACCCTTCTCAGCGTGACCCCAGACATCCTGCAACCT...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp CAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAGCCACACTAAGAACTaGAAATCTGTGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: QKPKQTHCLDKFRPYVFPSHTKN*KSVRGA
Trigger: AGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCT...AGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTGCTCTCAGAGCAAGCAGACCCACTGCCTaGATAAATTCAGACCATACG +
Preference number: 4 (lower is better)
Translates to: TLNSHTKNWKSVRGALRASRPTA*INSDHT
Trigger: CGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCT...TGCTCTGAGAGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATTCCAGGGGGAATATGTaGAGAAGATCTACCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYSRGNM*RRSTPS
Trigger: GCTTGGGGTAGATCTTCTTCACATATTCCCCCTGGA...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp ACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTTGTAACCGACGGCTTTaGCTTCCAGCCCAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: TAWINSDHTSSLIVPGTFCNRRL*LPAQVL
Trigger: TAAAACCTGGGCTGGAAGTCAAAGCCGTCGGTTACA...AAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATTCGGCGGATTCCTTCTaGTCCTTCCCACAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHSADSF*SFPQSV
Trigger: AACAGACTGTGGGAAGGATCAGAAGGAATCCGCCGA...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp AGAATCACATCTGCTCTCCTGCCAGGAAGCACCTCGAGGATTCTCTGTGAGGTTAAGATACAAAACAGATaGAAACTGTGTCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RITSALLPGSTSRILCEVKIQNR*KLCLSF
Trigger: GAAGCTGAGACACAGTTTTCATCTGTTTTGTATCTT...AACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGAGAGCAGATGTGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp TATGCGACTTGGAAATTTAGCTGTGCTGTTGGGGAAAGATGTCAATACATCATTCGCCTGTCCGATTCTTaGAGCGACTCCCAACAGTGT +
Preference number: 4 (lower is better)
Translates to: YATWKFSCAVGERCQYIIRLSDS*SDSQQC
Trigger: ACACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCG...AATGATGTATTGACATCTTTCCCCAACAGCACAGCTAAATTTCCAAGTCGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATACTCCCCACTTGTCCTaGTCCATCTCCAAAATCAGC +
Preference number: 4 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYTPHLS*SISKIS
Trigger: GCTGATTTTGGAGATGGAGCAGGACAAGTGGGGAGT...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp ACTCCTGACTTCAAGCAATCCCCCAGCCTCAGCCTTCTAAAGCCCTGGGTTTACGAAGAATGCGTGAATTaGTATATTGTTCACCAGAAA +
Preference number: 4 (lower is better)
Translates to: TPDFKQSPSLSLLKPWVYEECVN*YIVHQK
Trigger: TTTCTGGTGAACAATATAGCAATTCACGCATTCTTC...GTAAACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp CACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTTCCGTGGTACTGTGTaGCCAAGAAGTACACTTCTG +
Preference number: 4 (lower is better)
Translates to: HCLDKFRPYVFPNCSGNFFRGTV*PRSTLL
Trigger: CAGAAGTGTACTTCTTGGCCACACAGTACCACGGAA...AAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATAGCCTTCTAAAGCCCTaGGTTTACAGGCATGAGTGG +
Preference number: 4 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYSLLKP*VYRHEW
Trigger: CCACTCATGCCTGTAAACCCAGGGCTTTAGAAGGCT...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp GATAACTTTCTCTTCCCAAATCACAATATAGCGGACTTTTTCATTTTCCATGGCTCACAAATGGGTCCCTaGGATGTCGGGTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: DNFLFPNHNIADFFIFHGSQMGP*DVGSAT
Trigger: TGTGGCTGACCCGACATCTCAGGGACCCATTTGTGA...GCCATGGAAAATGAAAAAGTCCGCTATATTGTGATTTGGGAAGAGAAAGTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATCCAAAGCAGACCCACTaGCTGGATAAATTCAGACCA +
Preference number: 4 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNPKQTH*LDKFRP
Trigger: TGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGG...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp AAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTATGATCCTTACATTCTaGAATTCCTCTGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: KREREKERERLPTCPAPSMILTF*NSSVSL
Trigger: GAGACTGACAGAGGAATTCCAGAATGTAAGGATCAT...AGATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATTTCCGTGGTACTGTGTaGCCAAGAAGTACACTTCTG +
Preference number: 4 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYFRGTV*PRSTLL
Trigger: CAGAAGTGTACTTCTTGGCCACACAGTACCACGGAA...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp TTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTGCTGCTTGAAGAATAGCCACACTAAGAACTaGAAATCTGTGCGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: FRPYVFPNCSGNFCCLKNSHTKN*KSVRGA
Trigger: AGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCT...ATTCTTCAAGCAGCAAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp CAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTTGCTTGAAGAATGCGTaGATTGCTATATTGTTCACC +
Preference number: 4 (lower is better)
Translates to: QKPKQTHCLDKFRPYVFPCLKNA*IAILFT
Trigger: GGTGAACAATATAGCAATTCACGCATTCTTCAAGCA...AGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATAGGGCACAGAAAAGTTaGTCCTTCCAGGGGGAATAT +
Preference number: 4 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHRAQKS*SFQGEY
Trigger: ATATTCCCCCTGGAAGGAGCAACTTTTCTGTGCCCT...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CCCAGATTTTCTACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTACAAGAAATCCTCACTaGTTCACAGTGCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PRFSTLNSHTKNWKSVRGTRNPH*FTVPFL
Trigger: AAGGAAGGGCACTGTGAAGCAGTGAGGATTTCTTGT...ACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGTAGAAAATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATACAAGAAATCCTCACTaGTTCACAGTGCCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYTRNPH*FTVPFL
Trigger: AAGGAAGGGCACTGTGAAGCAGTGAGGATTTCTTGT...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTGCTCTCAGAGCAATGATCCTTACATTCTaGAATTCCTCTGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TLNSHTKNWKSVRGALRAMILTF*NSSVSL
Trigger: GAGACTGACAGAGGAATTCCAGAATGTAAGGATCAT...TGCTCTGAGAGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp GATAACTTTCTCTTCCCAAATCACAATATAGCGGACTTTTTCATTTTCCATGGCGCATGGGCGGTTGGCTaGTCTCATTATTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: DNFLFPNHNIADFFIFHGAWAVG*SHYSGE
Trigger: TTCTCCTGAATAATGAGATCAGCCAACCGCCCATGC...GCCATGGAAAATGAAAAAGTCCGCTATATTGTGATTTGGGAAGAGAAAGTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR GCA 90 bp AAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTGAAGAATGCGTGAATTaGTATATTGTTCACCAGAAA +
Preference number: 4 (lower is better)
Translates to: KREREKERERLPTCPAPSEECVN*YIVHQK
Trigger: TTTCTGGTGAACAATATAGCAATTCACGCATTCTTC...AGATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp CCCAGATTTTCTACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTTGCTTGAAGAATGCGTaGATTGCTATATTGTTCACC +
Preference number: 4 (lower is better)
Translates to: PRFSTLNSHTKNWKSVRGCLKNA*IAILFT
Trigger: GGTGAACAATATAGCAATTCACGCATTCTTCAAGCA...ACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGTAGAAAATCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CCA 90 bp ACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTATGATCCTTACATTCTaGAATTCCTCTGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TAWINSDHTSSLIVPGTFMILTF*NSSVSL
Trigger: GAGACTGACAGAGGAATTCCAGAATGTAAGGATCAT...AAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR TCA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATTGCTTGAAGAATGCGTaGATTGCTATATTGTTCACC +
Preference number: 4 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHCLKNA*IAILFT
Trigger: GGTGAACAATATAGCAATTCACGCATTCTTCAAGCA...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR GCA 90 bp CCCAGATTTTCTACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTCACCACATCACTGCTTaGTTTGGCAATTACATTTAT +
Preference number: 4 (lower is better)
Translates to: PRFSTLNSHTKNWKSVRGHHITA*FGNYIY
Trigger: ATAAATGTAATTGCCAAAGCAAGCAGTGATGTGGTG...ACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGTAGAAAATCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242257.14
3UTR CAA 72 bp GTAAAAGAAAATAAACACACCACATCACTGCTTGCTTaGGCAATTACATTTATGTTCTTGGGAGCCCAGACA +
Preference number: 4 (lower is better)
Translates to: VKENKHTTSLLA*AITFMFLGAQT
Trigger: TGTCTGGGCTCCCAAGAACATAAATGTAATTGCCAAAGCAAGCAGTGATGTGGTGTGTTTATTTTCTTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242257.14
CDS TCA 90 bp GAGCTGGGATCTGTGCCTGCGGCGTTGACCTTCTGCACCGCCACCTaGCTCCAGGCCCCAGGAGCTGCCCCACAGTCTAACACCCGAAGG +
Preference number: 5 (lower is better)
Translates to: ELGSVPAALTFCTAT*LQAPGAAPQSNTRR
Trigger: CCTTCGGGTGTTAGACTGTGGGGCAGCTCCTGGGGCCTGGAGTCAGGTGGCGGTGCAGAAGGTCAACGCCGCAGGCACAGATCCCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
CDS TCA 90 bp GAGACTCCATCTGTGCCTGCGGCGTTGACCTTCTGCACCGCCACCTaGCTCCAGGCCCCAGGAGCTGCCCCACAGTCTAACACCCGAAGG +
Preference number: 5 (lower is better)
Translates to: ETPSVPAALTFCTAT*LQAPGAAPQSNTRR
Trigger: CCTTCGGGTGTTAGACTGTGGGGCAGCTCCTGGGGCCTGGAGTCAGGTGGCGGTGCAGAAGGTCAACGCCGCAGGCACAGATGGAGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS GCA 90 bp GCTGCCCCACAGTCTAACACCCGAAGGCCGGGCCGCAGAATCTGGTaGCTCTCGTTCACCTCCAGGAGCTTGAAGGCGCTTCGACACCGG +
Preference number: 5 (lower is better)
Translates to: AAPQSNTRRPGRRIW*LSFTSRSLKALRHR
Trigger: CCGGTGTCGAAGCGCCTTCAAGCTCCTGGAGGTGAACGAGAGGCACCAGATTCTGCGGCCCGGCCTTCGGGTGTTAGACTGTGGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS CCA 90 bp GGAGCTGCCCCACAGTCTAACACCCGAAGGCCGGGCCGCAGAATCTaGTGCCTCTCGTTCACCTCCAGGAGCTTGAAGGCGCTTCGACAC +
Preference number: 5 (lower is better)
Translates to: GAAPQSNTRRPGRRI*CLSFTSRSLKALRH
Trigger: GTGTCGAAGCGCCTTCAAGCTCCTGGAGGTGAACGAGAGGCACCAGATTCTGCGGCCCGGCCTTCGGGTGTTAGACTGTGGGGCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS TCA 90 bp GGCCGGGCCGCAGAATCTGGTGCCTCTCGTTCACCTCCAGGAGCTTaGAGGCGCTTCGACACCGGTAACTCTCCACCTTCGCAGCCTTCA +
Preference number: 5 (lower is better)
Translates to: GRAAESGASRSPPGA*RRFDTGNSPPSQPS
Trigger: TGAAGGCTGCGAAGGTGGAGAGTTACCGGTGTCGAAGCGCCTTCAAGCTCCTGGAGGTGAACGAGAGGCACCAGATTCTGCGGCCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS-3UTR CAA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTTCAAGTACCCCGCCATaGGTGTTCCCCGCGCCTGCA +
Preference number: 5 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSSSTPP*VFPAPA
Trigger: TGCAGGCGCGGGGAACACCAATGGCGGGGTACTTGA...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242257.14
ENST00000486040.1
CDS-3UTR CAA 90 bp GATCGCAAACCAGCAGCGAGGCAGATGTGCAGATCCAGGGGGCCAGCATTCCATCGGAACCCTGTGGCATaGGGCGCCATGTCGCTCAGA +
Preference number: 5 (lower is better)
Translates to: DRKPAARQMCRSRGPAFHRNPVA*GAMSLR
Trigger: TCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCG...ATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCGCTGCTGGTTTGCGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS GCA 90 bp GCAGCCTTCACAAATGGGTCCCTGAGATGTCGGGTCAGCCACAGGTaGTCAGCGCCTGTCCGATTCTTGCAGCGACTCCCAACAGTGTGG +
Preference number: 5 (lower is better)
Translates to: AAFTNGSLRCRVSHR*SAPVRFLQRLPTVW
Trigger: CCACACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCGCTGAGCACCTGTGGCTGACCCGACATCTCAGGGACCCATTTGTGAAGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS-3UTR CAA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTGCGCCTGTCCGATTCTaGCAGCGACTCCCAACAGTG +
Preference number: 5 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSAPVRF*QRLPTV
Trigger: CACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCGC...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS TCA 90 bp GACACCGGTAACTCTCCACCTTCGCAGCCTTCACAAATGGGTCCCTaGGATGTCGGGTCAGCCACAGGTGCTCAGCGCCTGTCCGATTCT +
Preference number: 5 (lower is better)
Translates to: DTGNSPPSQPSQMGP*DVGSATGAQRLSDS
Trigger: AGAATCGGACAGGCGCTGAGCACCTGTGGCTGACCCGACATCTCAGGGACCCATTTGTGAAGGCTGCGAAGGTGGAGAGTTACCGGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS-3UTR CAA 90 bp TCCTGCCAGGAAGCACCTCGAGGATTCTCTGTGAGGTTCTCGGGTCAGTCACGTTTCACCTCCAGGAGCTaGAAGGCGCTTCGACACCGG +
Preference number: 5 (lower is better)
Translates to: SCQEAPRGFSVRFSGQSRFTSRS*KALRHR
Trigger: CCGGTGTCGAAGCGCCTTCAAGCTCCTGGAGGTGAA...ACGTGACTGACCCGAGAACCTCACAGAGAATCCTCGAGGTGCTTCCTGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CAA 90 bp AAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCTTCTGTGCCTGCGGCGTaGACCTTCTGCACCGCCACC +
Preference number: 5 (lower is better)
Translates to: KREREKERERLPTCPAPSSVPAA*TFCTAT
Trigger: GGTGGCGGTGCAGAAGGTCAACGCCGCAGGCACAGA...AGATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp AGGATATTCACCACAGCACACGCATCCCAGCCAAAAGCCAAAAGCAACCTTGATTCTGTGCCTGCGGCGTaGACCTTCTGCACCGCCACC +
Preference number: 5 (lower is better)
Translates to: RIFTTAHASQPKAKSNLDSVPAA*TFCTAT
Trigger: GGTGGCGGTGCAGAAGGTCAACGCCGCAGGCACAGA...ATCAAGGTTGCTTTTGGCTTTTGGCTGGGATGCGTGTGCTGTGGTGAATATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CAA 90 bp ACATGGGCACACCCATCCCTGCCTCGGCGGATTCCTTCTGATCCTTCCCACAGTCTGCTGGCTTCAGGTTaGATGATCCTTACATTCTGG +
Preference number: 5 (lower is better)
Translates to: TWAHPSLPRRIPSDPSHSLLASG*MILTFW
Trigger: CCAGAATGTAAGGATCATCAAACCTGAAGCCAGCAG...ACTGTGGGAAGGATCAGAAGGAATCCGCCGAGGCAGGGATGGGTGTGCCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp TCCAGCAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTGCGCCTGTCCGATTCTaGCAGCGACTCCCAACAGTG +
Preference number: 5 (lower is better)
Translates to: SSKNQSRPTAWINSDHTSAPVRF*QRLPTV
Trigger: CACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCGC...AGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp TCCAGCAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTTTCACCTCCAGGAGCTaGAAGGCGCTTCGACACCGG +
Preference number: 5 (lower is better)
Translates to: SSKNQSRPTAWINSDHTSFTSRS*KALRHR
Trigger: CCGGTGTCGAAGCGCCTTCAAGCTCCTGGAGGTGAA...AGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATTCTGTGCCTGCGGCGTaGACCTTCTGCACCGCCACC +
Preference number: 5 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYSVPAA*TFCTAT
Trigger: GGTGGCGGTGCAGAAGGTCAACGCCGCAGGCACAGA...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATCGGAACCCTGTGGCATaGGGCGCCATGTCGCTCAGA +
Preference number: 5 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYRNPVA*GAMSLR
Trigger: TCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCG...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp ACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTCGGAACCCTGTGGCATaGGGCGCCATGTCGCTCAGA +
Preference number: 5 (lower is better)
Translates to: TAWINSDHTSSLIVPGTFRNPVA*GAMSLR
Trigger: TCTGAGCGACATGGCGCCCAATGCCACAGGGTTCCG...AAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp TGTGAAGAAGATCTACCCCAAGCACGAAGCCAACAGGAGAGCTGGGATCGCAAACAGTTGCATGGGCGGTaGGCTGATCTCATTATTCAG +
Preference number: 5 (lower is better)
Translates to: CEEDLPQARSQQESWDRKQLHGR*ADLIIQ
Trigger: CTGAATAATGAGATCAGCCAACCGCCCATGCAACTG...TTTGCGATCCCAGCTCTCCTGTTGGCTTCGTGCTTGGGGTAGATCTTCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CAA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATTCAAGTACCCCGCCATaGGTGTTCCCCGCGCCTGCA +
Preference number: 5 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHSSTPP*VFPAPA
Trigger: TGCAGGCGCGGGGAACACCAATGGCGGGGTACTTGA...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242257.14
ENST00000486040.1
CDS-3UTR CAA 90 bp CCCAGATTTTCTACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTGCGCCTGTCCGATTCTaGCAGCGACTCCCAACAGTG +
Preference number: 5 (lower is better)
Translates to: PRFSTLNSHTKNWKSVRGAPVRF*QRLPTV
Trigger: CACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCGC...ACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGTAGAAAATCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp CCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTAGAGAGACTCCCCACTaGTCCTGCTCCATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: PTAWINSDHTSSLIVPGTRETPH*SCSISK
Trigger: TTTGGAGATGGAGCAGGACAAGTGGGGAGTCTCTCT...AGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATTTCACCTCCAGGAGCTaGAAGGCGCTTCGACACCGG +
Preference number: 5 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHFTSRS*KALRHR
Trigger: CCGGTGTCGAAGCGCCTTCAAGCTCCTGGAGGTGAA...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp ACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTGCTCTCAGAGCACAGGGCACAGAAAAGTaGCTCCTTCCAGGGGGAATA +
Preference number: 5 (lower is better)
Translates to: TLNSHTKNWKSVRGALRAQGTEK*LLPGGI
Trigger: TATTCCCCCTGGAAGGAGCAACTTTTCTGTGCCCTG...TGCTCTGAGAGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp ACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTGCTCTCAGAGCAAGAGAGACTCCCCACTaGTCCTGCTCCATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: TLNSHTKNWKSVRGALRARETPH*SCSISK
Trigger: TTTGGAGATGGAGCAGGACAAGTGGGGAGTCTCTCT...TGCTCTGAGAGCACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp AAAAAGAGAGAGAGAGAAAGAGAGAGAGAGACTCCCCACTTGTCCTGCTCCATCCTGCTGGCTTCAGGTTaGATGATCCTTACATTCTGG +
Preference number: 5 (lower is better)
Translates to: KKRERERERETPHLSCSILLASG*MILTFW
Trigger: CCAGAATGTAAGGATCATCAAACCTGAAGCCAGCAG...GATGGAGCAGGACAAGTGGGGAGTCTCTCTCTCTCTTTCTCTCTCTCTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp CCCACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTCTGCTGGCTTCAGGTTaGATGATCCTTACATTCTGG +
Preference number: 5 (lower is better)
Translates to: PTAWINSDHTSSLIVPGTLLASG*MILTFW
Trigger: CCAGAATGTAAGGATCATCAAACCTGAAGCCAGCAG...AGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATCGACAGTGTCTTCAGTaGCATGGGCGGTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYRQCLQ*HGRLAD
Trigger: ATCAGCCAACCGCCCATGCAACTGAAGACACTGTCG...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CAA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATCAGGGCACAGAAAAGTaGCTCCTTCCAGGGGGAATA +
Preference number: 5 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYQGTEK*LLPGGI
Trigger: TATTCCCCCTGGAAGGAGCAACTTTTCTGTGCCCTG...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp ACTGCCTGGATAAATTCAGACCATACGTCTTCCCTAATTGTTCCGGGAACTTTTAGAGAGACTCCCCACTaGTCCTGCTCCATCTCCAAA +
Preference number: 5 (lower is better)
Translates to: TAWINSDHTSSLIVPGTFRETPH*SCSISK
Trigger: TTTGGAGATGGAGCAGGACAAGTGGGGAGTCTCTCT...AAAAGTTCCCGGAACAATTAGGGAAGACGTATGGTCTGAATTTATCCAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp TTTGTGTGTGACAGTTTAACAGTCTATAAGATGAAGTCCCGTCAAGGCACACATCAGGGCACAGAAAAGTaGCTCCTTCCAGGGGGAATA +
Preference number: 5 (lower is better)
Translates to: FVCDSLTVYKMKSRQGTHQGTEK*LLPGGI
Trigger: TATTCCCCCTGGAAGGAGCAACTTTTCTGTGCCCTG...ATGTGTGCCTTGACGGGACTTCATCTTATAGACTGTTAAACTGTCACACACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp CTCTTCAGGAGCTCAGGCTACGTTTCTAGCTTAAAAGGAGCTAATGACCATTATCCTACTCTAAGGTATTaGGGAGAGACTTGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: LFRSSGYVSSLKGANDHYPTLRY*GETWES
Trigger: GCTCTCCCAAGTCTCTCCCAAATACCTTAGAGTAGG...ATAATGGTCATTAGCTCCTTTTAAGCTAGAAACGTAGCCTGAGCTCCTGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CAA 90 bp CCCAGATTTTCTACTTTAAACAGCCACACTAAGAACTGGAAATCTGTGCGTGGTTTGTTCCGGGAACTTTaGCTGCTTGAAGAATGCGTG +
Preference number: 5 (lower is better)
Translates to: PRFSTLNSHTKNWKSVRGLFREL*LLEECV
Trigger: CACGCATTCTTCAAGCAGCAAAAGTTCCCGGAACAA...ACCACGCACAGATTTCCAGTTCTTAGTGTGGCTGTTTAAAGTAGAAAATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000486040.1
CDS-3UTR CAA 90 bp GATAACTTTCTCTTCCCAAATCACAATATAGCGGACTTTTTCATTTTCCATGGCAGGCAGGAGAATCGCTaGAACCAGGTAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: DNFLFPNHNIADFFIFHGRQENR*NQVGRG
Trigger: ACCTCTGCCTACCTGGTTCAAGCGATTCTCCTGCCT...GCCATGGAAAATGAAAAAGTCCGCTATATTGTGATTTGGGAAGAGAAAGTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CAA 90 bp GATAACTTTCTCTTCCCAAATCACAATATAGCGGACTTTTTCATTTTCCATGGCGTATTTGGGAGAGACTaGGGAGAGCTCTGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: DNFLFPNHNIADFFIFHGVFGRD*GELWVD
Trigger: GTCCACCCAGAGCTCTCCCAAGTCTCTCCCAAATAC...GCCATGGAAAATGAAAAAGTCCGCTATATTGTGATTTGGGAAGAGAAAGTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CAA 90 bp TATGCGACTTGGAAATTTAGCTGTGCTGTTGGGGAAAGATGTCAATACATCATTTTGTTCCGGGAACTTTaGCTGCTTGAAGAATGCGTG +
Preference number: 5 (lower is better)
Translates to: YATWKFSCAVGERCQYIILFREL*LLEECV
Trigger: CACGCATTCTTCAAGCAGCAAAAGTTCCCGGAACAA...AATGATGTATTGACATCTTTCCCCAACAGCACAGCTAAATTTCCAAGTCGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486040.1
CDS-3UTR CAA 90 bp TCCAGCAAAAACCAAAGCAGACCCACTGCCTGGATAAATTCAGACCATACGTCTACATCACTGCTTGCTTaGGCAATTACATTTATGTTC +
Preference number: 5 (lower is better)
Translates to: SSKNQSRPTAWINSDHTSTSLLA*AITFMF
Trigger: GAACATAAATGTAATTGCCAAAGCAAGCAGTGATGT...AGACGTATGGTCTGAATTTATCCAGGCAGTGGGTCTGCTTTGGTTTTTGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000242257.14
CDS GCA 72 bp CGGAATCCTGGCCTCGCCCCTGTCGCGCTCGCTGAGTaGGGGGACGGTGCCCAGCGCTCGGCACCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: RNPGLAPVALAE*GDGAQRSAPSP
Trigger: GGGGCTGGGTGCCGAGCGCTGGGCACCGTCCCCGCACTCAGCGAGCGCGACAGGGGCGAGGCCAGGATTCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467199.5
CDS TCA 72 bp GACCCGGAATCCTGGCCTCGCCCCTGTCGCGCTCGCTaGGTGCGGGGACGGTGCCCAGCGCTCGGCACCCAG +
Preference number: 6 (lower is better)
Translates to: DPESWPRPCRAR*VRGRCPALGTQ
Trigger: CTGGGTGCCGAGCGCTGGGCACCGTCCCCGCACTCAGCGAGCGCGACAGGGGCGAGGCCAGGATTCCGGGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467199.5
CDS GCA 72 bp AGGCGACCGGGCGGACCCCCAACCACTCCCGCTGTCTaGACGCGCAGCAGCAGCGCCCAGCTCACCCCGCCA +
Preference number: 6 (lower is better)
Translates to: RRPGGPPTTPAV*TRSSSAQLTPP
Trigger: TGGCGGGGTGAGCTGGGCGCTGCTGCTGCGCGTGCAGACAGCGGGAGTGGTTGGGGGTCCGCCCGGTCGCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467199.5
CDS TCA 72 bp TCTGTGCCTGCGGCGTTGACCTTCTGCACCGCCACCTaGCTCCAGGCCCCAGGAGCTGCCCCACAGTCTAAC +
Preference number: 6 (lower is better)
Translates to: SVPAALTFCTAT*LQAPGAAPQSN
Trigger: GTTAGACTGTGGGGCAGCTCCTGGGGCCTGGAGTCAGGTGGCGGTGCAGAAGGTCAACGCCGCAGGCACAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS CCA 72 bp CCACAGTCTAACACCCGAAGGCCGGGCCGCAGAATCTaGTGCCTCTCGTTCACCTCCAGGAGCTTGAAGGCG +
Preference number: 6 (lower is better)
Translates to: PQSNTRRPGRRI*CLSFTSRSLKA
Trigger: CGCCTTCAAGCTCCTGGAGGTGAACGAGAGGCACCAGATTCTGCGGCCCGGCCTTCGGGTGTTAGACTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS GCA 72 bp GGGTCAGCCACAGGTGCTCAGCGCCTGTCCGATTCTTaGAGCGACTCCCAACAGTGTGGAACCCTTGACGCT +
Preference number: 6 (lower is better)
Translates to: GSATGAQRLSDS*SDSQQCGTLDA
Trigger: AGCGTCAAGGGTTCCACACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCGCTGAGCACCTGTGGCTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS GCA 72 bp CAGTCTAACACCCGAAGGCCGGGCCGCAGAATCTGGTaGCTCTCGTTCACCTCCAGGAGCTTGAAGGCGCTT +
Preference number: 6 (lower is better)
Translates to: QSNTRRPGRRIW*LSFTSRSLKAL
Trigger: AAGCGCCTTCAAGCTCCTGGAGGTGAACGAGAGGCACCAGATTCTGCGGCCCGGCCTTCGGGTGTTAGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS TCA 72 bp AACTCTCCACCTTCGCAGCCTTCACAAATGGGTCCCTaGGATGTCGGGTCAGCCACAGGTGCTCAGCGCCTG +
Preference number: 6 (lower is better)
Translates to: NSPPSQPSQMGP*DVGSATGAQRL
Trigger: CAGGCGCTGAGCACCTGTGGCTGACCCGACATCTCAGGGACCCATTTGTGAAGGCTGCGAAGGTGGAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS GCA 72 bp ACAAATGGGTCCCTGAGATGTCGGGTCAGCCACAGGTaGTCAGCGCCTGTCCGATTCTTGCAGCGACTCCCA +
Preference number: 6 (lower is better)
Translates to: TNGSLRCRVSHR*SAPVRFLQRLP
Trigger: TGGGAGTCGCTGCAAGAATCGGACAGGCGCTGAGCACCTGTGGCTGACCCGACATCTCAGGGACCCATTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS TCA 72 bp GCAGAATCTGGTGCCTCTCGTTCACCTCCAGGAGCTTaGAGGCGCTTCGACACCGGTAACTCTCCACCTTCG +
Preference number: 6 (lower is better)
Translates to: AESGASRSPPGA*RRFDTGNSPPS
Trigger: CGAAGGTGGAGAGTTACCGGTGTCGAAGCGCCTTCAAGCTCCTGGAGGTGAACGAGAGGCACCAGATTCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1
CDS CAA 90 bp AGCGCCTGTCCGATTCTTGCAGCGACTCCCAACAGTGTGGAACCCTaGACGCTGAAAGGAAACACACACCAGCTTCAAGTACCCCGCCAT +
Preference number: 6 (lower is better)
Translates to: SACPILAATPNSVEP*TLKGNTHQLQVPRH
Trigger: ATGGCGGGGTACTTGAAGCTGGTGTGTGTTTCCTTTCAGCGTCAAGGGTTCCACACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242257.14
ENST00000486040.1
CDS CAA 90 bp AGCGCCTGTCCGATTCTTGCAGCGACTCCCAACAGTGTGGAACCCTaGACGCTGAAAGGAAACACACACCAGCTTCAAGTACCCGGCCAT +
Preference number: 6 (lower is better)
Translates to: SACPILAATPNSVEP*TLKGNTHQLQVPGH
Trigger: ATGGCCGGGTACTTGAAGCTGGTGTGTGTTTCCTTTCAGCGTCAAGGGTTCCACACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440306.3
CDS CAA 90 bp AGCGCCTGTCCGATTCTTGCAGCGACTCCCAACAGTGTGGAACCCTaGACGCTGAAAGGAAACACACACCAGCTTCAAGTACCTGAGGGC +
Preference number: 6 (lower is better)
Translates to: SACPILAATPNSVEP*TLKGNTHQLQVPEG
Trigger: GCCCTCAGGTACTTGAAGCTGGTGTGTGTTTCCTTTCAGCGTCAAGGGTTCCACACTGTTGGGAGTCGCTGCAAGAATCGGACAGGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467199.5
CDS GCA 72 bp AGCCAACAGGAGAGCTGGGATCTGCGGGCGGTCTCATaGGAGGTGATTTCCATGTTCACTGCACCTTTCTAC +
Preference number: 6 (lower is better)
Translates to: SQQESWDLRAVS*EVISMFTAPFY
Trigger: GTAGAAAGGTGCAGTGAACATGGAAATCACCTCGCATGAGACCGCCCGCAGATCCCAGCTCTCCTGTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407040.1
CDS CAA 72 bp CCGATTCTTGCAGCGACTCCCAACAGTGTGGAACCCTaGACGCTGAAAGGAAACACACACCAGCTTCAAGTA +
Preference number: 6 (lower is better)
Translates to: PILAATPNSVEP*TLKGNTHQLQV
Trigger: TACTTGAAGCTGGTGTGTGTTTCCTTTCAGCGTCAAGGGTTCCACACTGTTGGGAGTCGCTGCAAGAATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242257.14
ENST00000440306.3
ENST00000467199.5
ENST00000486040.1