RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000274853, ENSG00000278619

Ensembl transcript IDs: ENST00000611231.2, ENST00000612760.1, ENST00000614766.5, ENST00000631971.1

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTaGCTGCCTCTCTGCAGATGTCTAAACTTTCCCTCAACTTCCAGG +
Preference number: 1 (lower is better)
Translates to: TGNDWFKRNGSPGLG*LPLCRCLNFPSTSR
Trigger: CCTGGAAGTTGAGGGAAAGTTTAGACATCTGCAGAGAGGCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGGAGGAACGGGTCCCCTaGGCTGGGCTGCCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALEERVP*AGLPAS
Trigger: AGAGGCAGGCAGCCCAGCCCAGGGGACCCGTTCCTC...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACGAGGAACGGGTCCCCTaGGCTGGGCTGCCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYEERVP*AGLPAS
Trigger: AGAGGCAGGCAGCCCAGCCCAGGGGACCCGTTCCTC...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGGGAAACAGCTTCCTCTaGTGTCCACCGCAGTCCCCT +
Preference number: 2 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALGNSFL*CPPQSP
Trigger: AGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCC...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGCTTCCAGGCAGGGCCTaGGAACAGATTCCCTCCATG +
Preference number: 2 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALLPGRA*EQIPSM
Trigger: CATGGAGGGAATCTGTTCCCAGGCCCTGCCTGGAAG...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGACGGGTCCCCTGGGCTaGGCTGCCTGCCTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGTGPLG*AACLSA
Trigger: TGCAGAGAGGCAGGCAGCCCAGCCCAGGGGACCCGT...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCAGGCTCCCCGCACACTaGAGCCGGCGGAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACRLPAH*SRRRQV
Trigger: CACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGGCCACAGGCAATGACTaGTTCAAGAGGAACGGGTCC +
Preference number: 2 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALATGND*FKRNGS
Trigger: GGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGC...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATGGAAACAGCTTCCTCTaGTGTCCACCGCAGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHGNSFL*CPPQSP
Trigger: AGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCC...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCTTCCAGGCAGGGCCTaGGAACAGATTCCCTCCATG +
Preference number: 2 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHLPGRA*EQIPSM
Trigger: CATGGAGGGAATCTGTTCCCAGGCCCTGCCTGGAAG...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR TCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCCTGACTCCAGCACATaGACACTGTGGACAGTCCAC +
Preference number: 2 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHPDSST*TLWTVH
Trigger: GTGGACTGTCCACAGTGTTCATGTGCTGGAGTCAGG...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR TCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCAGGTGCGGCCGTCCCTaGCTCCAGCACATGAACACT +
Preference number: 2 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACRCGRP*LQHMNT
Trigger: AGTGTTCATGTGCTGGAGTCAGGGACGGCCGCACCT...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGCATGCTAGGCCATCATaGCTTCCCATGGAAATTAAC +
Preference number: 2 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALHARPS*LPMEIN
Trigger: GTTAATTTCCATGGGAAGCCATGATGGCCTAGCATG...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGGCCACAGGCAATGACTaGTTCAAGAGGAACGGGTCC +
Preference number: 2 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGATGND*FKRNGS
Trigger: GGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGC...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR TCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATATTTGCCACAGGCAATaGCTGGTTCAAGAGGAACGG +
Preference number: 2 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHICHRQ*LVQEER
Trigger: CCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAAT...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR TCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCCCTGACTCCAGCACATaGACACTGTGGACAGTCCAC +
Preference number: 2 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACPDSST*TLWTVH
Trigger: GTGGACTGTCCACAGTGTTCATGTGCTGGAGTCAGG...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR TCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGATTTGCCACAGGCAATaGCTGGTTCAAGAGGAACGG +
Preference number: 2 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGICHRQ*LVQEER
Trigger: CCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAAT...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR TCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCCCTGACTCCAGCACATaGACACTGTGGACAGTCCAC +
Preference number: 2 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGPDSST*TLWTVH
Trigger: GTGGACTGTCCACAGTGTTCATGTGCTGGAGTCAGG...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGAGGCTCCCCGCACACTaGAGCCGGCGGAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: HILIHTFATGNDWFKRNGRLPAH*SRRRQV
Trigger: CACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCAAGGCTCCCCGCACACTaGAGCCGGCGGAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: DSLHARPSWLPMEINKSPRLPAH*SRRRQV
Trigger: CACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCCATGCTAGGCCATCATaGCTTCCCATGGAAATTAAC +
Preference number: 2 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACHARPS*LPMEIN
Trigger: GTTAATTTCCATGGGAAGCCATGATGGCCTAGCATG...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCCATCATGGCTTCCCATaGAAATTAACAAATCACCAT +
Preference number: 2 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACHHGFP*KLTNHH
Trigger: ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATG...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR GCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGGGCTGCCTGCCTCTCTaGAGATGTCTAAACTTTCCC +
Preference number: 2 (lower is better)
Translates to: HILIHTFATGNDWFKRNGGCLPL*RCLNFP
Trigger: GGGAAAGTTTAGACATCTGCAGAGAGGCAGGCAGCC...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCCATCATGGCTTCCCATaGAAATTAACAAATCACCAT +
Preference number: 2 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGHHGFP*KLTNHH
Trigger: ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATG...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR TCA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACCTGACTCCAGCACATaGACACTGTGGACAGTCCAC +
Preference number: 2 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLPDSST*TLWTVH
Trigger: GTGGACTGTCCACAGTGTTCATGTGCTGGAGTCAGG...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR CCA 72 bp GCCTGGTGCACACTCAGGCAGAGGCTCCCCGCACACTaGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACT +
Preference number: 3 (lower is better)
Translates to: AWCTLRQRLPAH*SRRRQVRPSLT
Trigger: AGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCTCTGCCTGAGTGTGCACCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR-3UTR CAA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTTCTCATACACACATTaGCCACAGGCAATGACTGGT +
Preference number: 3 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYFSYTH*PQAMTG
Trigger: ACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAA...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR GCA 72 bp GACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTaGCTGCCTCTCTGCAGATGTCTAAACTTTCCCTCA +
Preference number: 3 (lower is better)
Translates to: DWFKRNGSPGLG*LPLCRCLNFPS
Trigger: TGAGGGAAAGTTTAGACATCTGCAGAGAGGCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR TCA 72 bp CCCCCACATTCTCATACACACATTTGCCACAGGCAATaGCTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: PPHSHTHICHRQ*LVQEERVPWAG
Trigger: CCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
3UTR CCA 72 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTaGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: HILIHTFATGND*FKRNGSPGLGC
Trigger: GCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGAGCGGCGGGCGGCCTaGAGAGCCAGGAGACACGGG +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPERRAA*RARRHG
Trigger: CCCGTGTCTCCTGGCTCTGCAGGCCGCCCGCCGCTC...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAAGGCTCCCCGCACACTaGAGCCGGCGGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPRLPAH*SRRRQV
Trigger: CACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGACGGGTCCCCTGGGCTaGGCTGCCTGCCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALTGPLG*AACLSA
Trigger: TGCAGAGAGGCAGGCAGCCCAGCCCAGGGGACCCGT...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCCGGGGCAGGATGGTaGGGAGAAGCTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPAGAGW*GEAGRR
Trigger: CCTCCTGCCAGCTTCTCCTCACCATCCTGCCCCGGC...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGCGCGGCACAGAAAGATaGGGCCTGCGCTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALRGTER*GLRSRP
Trigger: GGGCCTTGAGCGCAGGCCTCATCTTTCTGTGCCGCG...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGCCAGGCCGCTCCCCATaGCGCGCTGCATGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALPGRSP*RAAWEK
Trigger: TTTCTCCCATGCAGCGCGGCATGGGGAGCGGCCTGG...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCATCGGCCCGCTTCCCCTaGAGCCCAGCTTTACCCGCC +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPSARFP*SPALPA
Trigger: GGCGGGTAAAGCTGGGCTGCAGGGGAAGCGGGCCGA...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCCCAGGCTCCCACGTaGGTCCCTCGCTTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALSQAPT*VPRFRV
Trigger: AACCCGGAAGCGAGGGACCCACGTGGGAGCCTGGGA...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAACGGGTCCCCTGGGCTaGGCTGCCTGCCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPTGPLG*AACLSA
Trigger: TGCAGAGAGGCAGGCAGCCCAGCCCAGGGGACCCGT...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGAGGAACGGGTCCCCTaGGCTGGGCTGCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPEERVP*AGLPAS
Trigger: AGAGGCAGGCAGCCCAGCCCAGGGGACCCGTTCCTC...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGACTGGGGATCCTCTGTaGTTGGGCAGCCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALTGDPL*LGSPPC
Trigger: GCACGGTGGGCTGCCCAAGCACAGAGGATCCCCAGT...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACAGTCCAGGAGGCAGCTaGCGCCGGGGCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYSPGGS*RRGRMV
Trigger: CACCATCCTGCCCCGGCGCCAGCTGCCTCCTGGACT...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGCCCTTCAGACCTGGCTaGGGGTTCTTGGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALPFRPG*GFLGVL
Trigger: CAAGACCCCCAAGAACCCTCAGCCAGGTCTGAAGGG...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGGTGCTGAGCCATGCTaGGCCCTTCAGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPGAEPC*ALQTWL
Trigger: CAGCCAGGTCTGAAGGGCTCAGCATGGCTCAGCACC...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACCGCGGCACAGAAAGATaGGGCCTGCGCTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYRGTER*GLRSRP
Trigger: GGGCCTTGAGCGCAGGCCTCATCTTTCTGTGCCGCG...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATCCAGGCCGCTCCCCATaGCGCGCTGCATGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHPGRSP*RAAWEK
Trigger: TTTCTCCCATGCAGCGCGGCATGGGGAGCGGCCTGG...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATTCGGCCCGCTTCCCCTaGAGCCCAGCTTTACCCGCC +
Preference number: 4 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHSARFP*SPALPA
Trigger: GGCGGGTAAAGCTGGGCTGCAGGGGAAGCGGGCCGA...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCACACTCCGAGGAAGTGTaGGGAACGCAGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPHSEEV*GTQHSP
Trigger: GGGGCTGTGCTGCGTTCCGCACACTTCCTCGGAGTG...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATTCCCAGGCTCCCACGTaGGTCCCTCGCTTCCGGGTT +
Preference number: 4 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHSQAPT*VPRFRV
Trigger: AACCCGGAAGCGAGGGACCCACGTGGGAGCCTGGGA...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR TCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATGGGAGAAATGACGGGTaGCGAGGCGACCCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHGRNDG*RGDPRS
Trigger: CGACCTGGGGTCGCCTCGTCACCCGTCATTTCTCCC...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR TCA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATGGTGCTGAGCCATGCTaGGCCCTTCAGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHGAEPC*ALQTWL
Trigger: CAGCCAGGTCTGAAGGGCTCAGCATGGCTCAGCACC...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGGGGTCTTGGAGAAGCTaGCTTCTCTCCCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALGSWRS*LLSPSV
Trigger: CACAGAGGGGGAGAGAAGGCAGCTTCTCCAAGACCC...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACCAGAAAGATGAGGCCTaGGCTCAAGGCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYQKDEA*AQGPRA
Trigger: CGCCCTGGGGCCTTGAGCGCAGGCCTCATCTTTCTG...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGGAGGAACGGGTCCCCTaGGCTGGGCTGCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGEERVP*AGLPAS
Trigger: AGAGGCAGGCAGCCCAGCCCAGGGGACCCGTTCCTC...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATCTCCCAACACCGAGGTaGAGGGTACTCGACAGCCGT +
Preference number: 4 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHLPTPR*RVLDSR
Trigger: ACGGCTGTCGAGTACCCTTCACCTCGGTGTTGGGAG...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR TCA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATAGGTGCGGCCGTCCCTaGCTCCAGCACATGAACACT +
Preference number: 4 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHRCGRP*LQHMNT
Trigger: AGTGTTCATGTGCTGGAGTCAGGGACGGCCGCACCT...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACAGCTGGCAGGAGGCCTaGACCTCCTGGGATAGACCT +
Preference number: 4 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYSWQEA*TSWDRP
Trigger: AGGTCTATCCCAGGAGGTGCAGGCCTCCTGCCAGCT...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGGGTCTTGGAGAAGCTaGCTTCTCTCCCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPGSWRS*LLSPSV
Trigger: CACAGAGGGGGAGAGAAGGCAGCTTCTCCAAGACCC...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGCCAGCTTTACCCGCCTaGAGCAGGAGCCGGGCCACA +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGPALPA*SRSRAT
Trigger: TGTGGCCCGGCTCCTGCTCCAGGCGGGTAAAGCTGG...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGACGAGCCACAACTGCTaGGGGTCGTCGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGTSHNC*GSSPGL
Trigger: GAGCCCAGGCGACGACCCCCAGCAGTTGTGGCTCGT...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCTCCCCATGCCGCGCTaGATGGGAGAAATGACGGGT +
Preference number: 4 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHLPMPR*MGEMTG
Trigger: ACCCGTCATTTCTCCCATGCAGCGCGGCATGGGGAG...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGATTGTGTCCAGTTTCTaGCGTCTGGGCCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALIVSSF*RLGRRT
Trigger: AGTTCTGCGGCCCAGACGGCAGAAACTGGACACAAT...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACGCCACGAGCCAGCCCTaGTGGGCTTTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYATSQP*WALVCK
Trigger: TTTACAGACCAAAGCCCAGCAGGGCTGGCTCGTGGC...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGGAGCGGGCAGCTCCATaGAGACACCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGERAAP*RHPGGP
Trigger: AGGTCCACCAGGGTGTCTGCATGGAGCTGCCCGCTC...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612760.1
ENST00000631971.1
CDS-3UTR CCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGGACTTGCTGACTACTaGAGTGAGCGGGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPGLADY*SERAAV
Trigger: AACAGCTGCCCGCTCACTCCAGTAGTCAGCAAGTCC...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATGAGGCCTGCACCTCCTaGGATAGACCTGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHEACTS*DRPEPS
Trigger: TGAGGGCTCAGGTCTATCCCAGGAGGTGCAGGCCTC...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGGTTCTTGGGGGTCTTaGAGAAGCTGCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPGSWGS*RSCLLS
Trigger: GGAGAGAAGGCAGCTTCTCCAAGACCCCCAAGAACC...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATGGAAACAGCTTCCTCTaGTGTCCACCGCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHGNSFL*CPPQSP
Trigger: AGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCC...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATCTTCCAGGCAGGGCCTaGGAACAGATTCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHLPGRA*EQIPSM
Trigger: CATGGAGGGAATCTGTTCCCAGGCCCTGCCTGGAAG...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp AGGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAACTCCAAGCAACTCATaGTGGGGATCTCGGAGGACT +
Preference number: 4 (lower is better)
Translates to: RLPAHWSRRRQVRPSLTPTPSNS*WGSRRT
Trigger: AGTCCTCCGAGATCCCCATCATGAGTTGCTTGGAGT...TGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGCCCTTCAGACCTGGCTaGGGGTTCTTGGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGPFRPG*GFLGVL
Trigger: CAAGACCCCCAAGAACCCTCAGCCAGGTCTGAAGGG...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATGCCACGAGCCAGCCCTaGTGGGCTTTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHATSQP*WALVCK
Trigger: TTTACAGACCAAAGCCCAGCAGGGCTGGCTCGTGGC...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATTGTGTGGGCCTGAGGTaGGCACTGTCTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHCVGLR*ALSTPH
Trigger: ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACA...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCCCAGCTTTACCCGCCTaGAGCAGGAGCCGGGCCACA +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACPALPA*SRSRAT
Trigger: TGTGGCCCGGCTCCTGCTCCAGGCGGGTAAAGCTGG...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCTCTGGGCCGCAGAACTaGAATGTCCCGCGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACSGPQN*NVPRLG
Trigger: GCCGAGGCGCGGGACATTCCAGTTCTGCGGCCCAGA...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGGGGATCTCGGAGGACTaGGGATCCTCTGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGGISED*GSSVLG
Trigger: CCCAAGCACAGAGGATCCCCAGTCCTCCGAGATCCC...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATGGACTTGCTGACTACTaGAGTGAGCGGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHGLADY*SERAAP
Trigger: TGGAGCTGCCCGCTCACTCCAGTAGTCAGCAAGTCC...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612760.1
ENST00000631971.1
CDS-3UTR TCA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACACTCCAAGCAACTCATaGTGGGGATCTCGGAGGACT +
Preference number: 4 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYTPSNS*WGSRRT
Trigger: AGTCCTCCGAGATCCCCATCATGAGTTGCTTGGAGT...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCGACAGCCCTGGGTGCTaGGCCATGCTGAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACDSPGC*AMLSPS
Trigger: TGAAGGGCTCAGCATGGCTCAGCACCCAGGGCTGTC...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACCCGATTACCCACAACTaGACTACCGAGCTACGACCA +
Preference number: 4 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYPITHN*TTELRP
Trigger: TGGTCGTAGCTCGGTAGTCCAGTTGTGGGTAATCGG...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCCAGTTTCTGCCGTCTaGGCCGCAGAACTGGAATGT +
Preference number: 4 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHPVSAV*AAELEC
Trigger: ACATTCCAGTTCTGCGGCCCAGACGGCAGAAACTGG...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATGGTTCTTGGGGGTCTTaGAGAAGCTGCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHGSWGS*RSCLLS
Trigger: GGAGAGAAGGCAGCTTCTCCAAGACCCCCAAGAACC...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCGCCGGGGCAGGATGGTaGGGAGAAGCTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGAGAGW*GEAGRR
Trigger: CCTCCTGCCAGCTTCTCCTCACCATCCTGCCCCGGC...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGCCTGACTCCAGCACATaGACACTGTGGACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGPDSST*TLWTVH
Trigger: GTGGACTGTCCACAGTGTTCATGTGCTGGAGTCAGG...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCCCGCCAGGGACTCGATaGCCCTTGCTGCGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPPPGTR*PLLRPR
Trigger: CCGGGGACGCAGCAAGGGGCATCGAGTCCCTGGCGG...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCGAGGCCTGCACCTCCTaGGATAGACCTGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACEACTS*DRPEPS
Trigger: TGAGGGCTCAGGTCTATCCCAGGAGGTGCAGGCCTC...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCGCCGGGGCAGGATGGTaGGGAGAAGCTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPAGAGW*GEAGRR
Trigger: CCTCCTGCCAGCTTCTCCTCACCATCCTGCCCCGGC...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCGGACTCGATGCCCCTTaGTGCGTCCCCGGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPGLDAP*CVPGSG
Trigger: ACCGCTCCCGGGGACGCAGCAAGGGGCATCGAGTCC...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCGGAGACACGGGGTCATaGCAAACAGAAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACGDTGS*QTEAPA
Trigger: GGCTGGAGCTTCTGTTTGGCATGACCCCGTGTCTCC...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGATTGTGTCCAGTTTCTaGCGTCTGGGCCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGIVSSF*RLGRRT
Trigger: AGTTCTGCGGCCCAGACGGCAGAAACTGGACACAAT...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCAGGACGAGCCACAACTaGTGGGGGTCGTCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGRTSHN*WGSSPG
Trigger: CCCAGGCGACGACCCCCAGCAGTTGTGGCTCGTCCT...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTCTGGGCCGCAGAACTaGAATGTCCCGCGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGSGPQN*NVPRLG
Trigger: GCCGAGGCGCGGGACATTCCAGTTCTGCGGCCCAGA...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCAGTCCAGGAGGCAGCTaGCGCCGGGGCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPSPGGS*RRGRMV
Trigger: CACCATCCTGCCCCGGCGCCAGCTGCCTCCTGGACT...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCCTTCCAGGCAGGGCCTaGGAACAGATTCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACLPGRA*EQIPSM
Trigger: CATGGAGGGAATCTGTTCCCAGGCCCTGCCTGGAAG...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCGGACTTGCTGACTACTaGAGTGAGCGGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACGLADY*SERAAP
Trigger: TGGAGCTGCCCGCTCACTCCAGTAGTCAGCAAGTCC...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612760.1
ENST00000631971.1
CDS-3UTR TCA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATTCTGTAAAAATCCGGTaGGGTCATCAGTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHSVKIR*GHQWRT
Trigger: TGTTCTCCACTGATGACCTCACCGGATTTTTACAGA...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCGACAGCCCTGGGTGCTaGGCCATGCTGAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGDSPGC*AMLSPS
Trigger: TGAAGGGCTCAGCATGGCTCAGCACCCAGGGCTGTC...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCGGCCGTGTGTGGGCCTaGGGTGCGCACTGTCTACTC +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPGRVWA*GAHCLL
Trigger: GAGTAGACAGTGCGCACCTCAGGCCCACACACGGCC...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCCTCGATGCCCCTTGCTaGGTCCCCGGGAGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPLDAPC*VPGSGN
Trigger: GTTACCGCTCCCGGGGACGCAGCAAGGGGCATCGAG...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCTGTGTGGGCCTGAGGTaGGCACTGTCTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACCVGLR*ALSTPH
Trigger: ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACA...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCGGTTCTTGGGGGTCTTaGAGAAGCTGCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACGSWGS*RSCLLS
Trigger: GGAGAGAAGGCAGCTTCTCCAAGACCCCCAAGAACC...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCGCCACAGGCAATGACTaGTTCAAGAGGAACGGGTCC +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACATGND*FKRNGS
Trigger: GGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGC...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCGGTGCTGAGCCATGCTaGGCCCTTCAGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPGAEPC*ALQTWL
Trigger: CAGCCAGGTCTGAAGGGCTCAGCATGGCTCAGCACC...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCGACAGCCCTGGGTGCTaGGCCATGCTGAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPDSPGC*AMLSPS
Trigger: TGAAGGGCTCAGCATGGCTCAGCACCCAGGGCTGTC...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCGCGGGCTCACCTCCATaGAGACACCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPAGSPP*RHPGGP
Trigger: AGGTCCACCAGGGTGTCTGCATGGAGGTGAGCCCGC...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCCACTCCGAGGAAGTGTaGGGAACGCAGCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPHSEEV*GTQHSP
Trigger: GGGGCTGTGCTGCGTTCCGCACACTTCCTCGGAGTG...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCATGCTAGGCCATCATaGCTTCCCATGGAAATTAAC +
Preference number: 4 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHHARPS*LPMEIN
Trigger: GTTAATTTCCATGGGAAGCCATGATGGCCTAGCATG...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCCTCCCAACACCGAGGTaGAGGGTACTCGACAGCCGT +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPLPTPR*RVLDSR
Trigger: ACGGCTGTCGAGTACCCTTCACCTCGGTGTTGGGAG...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR TCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGTCTGTAAAAATCCGGTaGGGTCATCAGTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGSVKIR*GHQWRT
Trigger: TGTTCTCCACTGATGACCTCACCGGATTTTTACAGA...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCAGGTGCGGCCGTCCCTaGCTCCAGCACATGAACACT +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPRCGRP*LQHMNT
Trigger: AGTGTTCATGTGCTGGAGTCAGGGACGGCCGCACCT...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCAGCTGGCAGGAGGCCTaGACCTCCTGGGATAGACCT +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPSWQEA*TSWDRP
Trigger: AGGTCTATCCCAGGAGGTGCAGGCCTCCTGCCAGCT...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGAACCCTTCCTCTGGCTaGAAATGGAGTGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGNPSSG*KWSEEE
Trigger: TTCTTCTTCACTCCATTTGCAGCCAGAGGAAGGGTT...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCATGGTGAGGAGAAGCTaGCAGGAGGCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPMVRRS*QEACTS
Trigger: GGAGGTGCAGGCCTCCTGCCAGCTTCTCCTCACCAT...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGTCCTCTGGCTGCAAATaGAGTGAAGAAGAATTCCTG +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGSSGCK*SEEEFL
Trigger: CAGGAATTCTTCTTCACTCCATTTGCAGCCAGAGGA...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCCTGGCTGAGGGTTCTTaGGGGTCTTGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGLAEGS*GSWRSC
Trigger: GCAGCTTCTCCAAGACCCCCAAGAACCCTCAGCCAG...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCGGAAACAGCTTCCTCTaGTGTCCACCGCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGGNSFL*CPPQSP
Trigger: AGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCC...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGCATGCTAGGCCATCATaGCTTCCCATGGAAATTAAC +
Preference number: 4 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGHARPS*LPMEIN
Trigger: GTTAATTTCCATGGGAAGCCATGATGGCCTAGCATG...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCGCCACGAGCCAGCCCTaGTGGGCTTTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPATSQP*WALVCK
Trigger: TTTACAGACCAAAGCCCAGCAGGGCTGGCTCGTGGC...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTTGGGCAGCCCACCGTaGCGGCCACGAGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGLGSPP*RPRASP
Trigger: AGGGCTGGCTCGTGGCCGGCACGGTGGGCTGCCCAA...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGTGTGGGCCTGAGGTaGGCACTGTCTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGCVGLR*ALSTPH
Trigger: ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACA...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCGCCACAGGCAATGACTaGTTCAAGAGGAACGGGTCC +
Preference number: 4 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGATGND*FKRNGS
Trigger: GGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGC...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCACTCCAAGCAACTCATaGTGGGGATCTCGGAGGACT +
Preference number: 4 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGTPSNS*WGSRRT
Trigger: AGTCCTCCGAGATCCCCATCATGAGTTGCTTGGAGT...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGAGCGGCGGGCGGCCTaGAGAGCCAGGAGACACGGG +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHERRAA*RARRHG
Trigger: CCCGTGTCTCCTGGCTCTGCAGGCCGCCCGCCGCTC...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCGGCCCGCTTCCCCTaGAGCCCAGCTTTACCCGCC +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGSARFP*SPALPA
Trigger: GGCGGGTAAAGCTGGGCTGCAGGGGAAGCGGGCCGA...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATTGGGCAGCCCACCGTaGCGGCCACGAGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPLGSPP*RPRASP
Trigger: AGGGCTGGCTCGTGGCCGGCACGGTGGGCTGCCCAA...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCGGCTGCCTGCCTCTCTaGAGATGTCTAAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGGCLPL*RCLNFP
Trigger: GGGAAAGTTTAGACATCTGCAGAGAGGCAGGCAGCC...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCCCAGTTTCTGCCGTCTaGGCCGCAGAACTGGAATGT +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPPVSAV*AAELEC
Trigger: ACATTCCAGTTCTGCGGCCCAGACGGCAGAAACTGG...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCAAATTCCGGGGATCCTaGATCCCATCGAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPKFRGS*IPSRTS
Trigger: GCTCGTCCTCGATGGGATCCAGGATCCCCGGAATTT...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp CCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTGCCTGCTCCTCTGGCTGCAAATaGAGTGAAGAAGAATTCCTG +
Preference number: 4 (lower is better)
Translates to: PQAMTGSRGTGPLGWAACSSGCK*SEEEFL
Trigger: CAGGAATTCTTCTTCACTCCATTTGCAGCCAGAGGA...GCAGGCAGCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGCGCGGCACAGAAAGATaGGGCCTGCGCTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGRGTER*GLRSRP
Trigger: GGGCCTTGAGCGCAGGCCTCATCTTTCTGTGCCGCG...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACATTGGGCAGCCCACCGTaGCGGCCACGAGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTLGSPP*RPRASP
Trigger: AGGGCTGGCTCGTGGCCGGCACGGTGGGCTGCCCAA...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAAGGCTCCCCGCACACTaGAGCCGGCGGAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTRLPAH*SRRRQV
Trigger: CACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCCT...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCAGGGAGAAATGACGGGTaGCGAGGCGACCCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPGRNDG*RGDPRS
Trigger: CGACCTGGGGTCGCCTCGTCACCCGTCATTTCTCCC...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR TCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGCCGGGGCAGGATGGTaGGGAGAAGCTGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHAGAGW*GEAGRR
Trigger: CCTCCTGCCAGCTTCTCCTCACCATCCTGCCCCGGC...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp AACATCACAACAGGAAACAGCTTCCTCTGGTGTCCACCGCAGTCCCCTTCCCCCATTTGCCACAGGCAATaGCTGGTTCAAGAGGAACGG +
Preference number: 4 (lower is better)
Translates to: NITTGNSFLWCPPQSPSPICHRQ*LVQEER
Trigger: CCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAAT...GGGGGAAGGGGACTGCGGTGGACACCAGAGGAAGCTGTTTCCTGTTGTGATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCAGGCCGTGTGTGGGCCTaGGGTGCGCACTGTCTACTC +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPGRVWA*GAHCLL
Trigger: GAGTAGACAGTGCGCACCTCAGGCCCACACACGGCC...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGGACTCGATGCCCCTTaGTGCGTCCCCGGGAGCGGT +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHGLDAP*CVPGSG
Trigger: ACCGCTCCCGGGGACGCAGCAAGGGGCATCGAGTCC...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCAGACGGTCGAGAGCAATaGCATGGCGCAGCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPDGREQ*HGAAPA
Trigger: GGCGGGAGCTGCGCCATGGCATTGCTCTCGACCGTC...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTGAGCGGCGGGCGGCCTaGAGAGCCAGGAGACACGGG +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLERRAA*RARRHG
Trigger: CCCGTGTCTCCTGGCTCTGCAGGCCGCCCGCCGCTC...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGGCGGGCTCACCTCCATaGAGACACCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGAGSPP*RHPGGP
Trigger: AGGTCCACCAGGGTGTCTGCATGGAGGTGAGCCCGC...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCAACGAGCCACAACTGCTaGGGGTCGTCGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPTSHNC*GSSPGL
Trigger: GAGCCCAGGCGACGACCCCCAGCAGTTGTGGCTCGT...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAAGTCCAGGAGGCAGCTaGCGCCGGGGCAGGATGGTG +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTSPGGS*RRGRMV
Trigger: CACCATCCTGCCCCGGCGCCAGCTGCCTCCTGGACT...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATACGGGTCCCCTGGGCTaGGCTGCCTGCCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHTGPLG*AACLSA
Trigger: TGCAGAGAGGCAGGCAGCCCAGCCCAGGGGACCCGT...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGGCCGTGTGTGGGCCTaGGGTGCGCACTGTCTACTC +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHGRVWA*GAHCLL
Trigger: GAGTAGACAGTGCGCACCTCAGGCCCACACACGGCC...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACACTCGATGCCCCTTGCTaGGTCCCCGGGAGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTLDAPC*VPGSGN
Trigger: GTTACCGCTCCCGGGGACGCAGCAAGGGGCATCGAG...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGACGGTCGAGAGCAATaGCATGGCGCAGCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHDGREQ*HGAAPA
Trigger: GGCGGGAGCTGCGCCATGGCATTGCTCTCGACCGTC...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATAGGACGAGCCACAACTaGTGGGGGTCGTCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHRTSHN*WGSSPG
Trigger: CCCAGGCGACGACCCCCAGCAGTTGTGGCTCGTCCT...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCACAGAAAGATGAGGCCTaGGCTCAAGGCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPQKDEA*AQGPRA
Trigger: CGCCCTGGGGCCTTGAGCGCAGGCCTCATCTTTCTG...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACATCTGGGCCGCAGAACTaGAATGTCCCGCGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTSGPQN*NVPRLG
Trigger: GCCGAGGCGCGGGACATTCCAGTTCTGCGGCCCAGA...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTAGAGGAACGGGTCCCCTaGGCTGGGCTGCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLEERVP*AGLPAS
Trigger: AGAGGCAGGCAGCCCAGCCCAGGGGACCCGTTCCTC...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAGACAGCCCTGGGTGCTaGGCCATGCTGAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTDSPGC*AMLSPS
Trigger: TGAAGGGCTCAGCATGGCTCAGCACCCAGGGCTGTC...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCACTCCCCATGCCGCGCTaGATGGGAGAAATGACGGGT +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPLPMPR*MGEMTG
Trigger: ACCCGTCATTTCTCCCATGCAGCGCGGCATGGGGAG...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGGGAGACACGGGGTCATaGCAAACAGAAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGGDTGS*QTEAPA
Trigger: GGCTGGAGCTTCTGTTTGGCATGACCCCGTGTCTCC...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTTCGGCCCGCTTCCCCTaGAGCCCAGCTTTACCCGCC +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLSARFP*SPALPA
Trigger: GGCGGGTAAAGCTGGGCTGCAGGGGAAGCGGGCCGA...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATACTGGGGATCCTCTGTaGTTGGGCAGCCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHTGDPL*LGSPPC
Trigger: GCACGGTGGGCTGCCCAAGCACAGAGGATCCCCAGT...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACACAGAAAGATGAGGCCTaGGCTCAAGGCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTQKDEA*AQGPRA
Trigger: CGCCCTGGGGCCTTGAGCGCAGGCCTCATCTTTCTG...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATCAGAAAGATGAGGCCTaGGCTCAAGGCCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHQKDEA*AQGPRA
Trigger: CGCCCTGGGGCCTTGAGCGCAGGCCTCATCTTTCTG...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGAGCGGGCAGCTCCATaGAGACACCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHERAAP*RHPGGP
Trigger: AGGTCCACCAGGGTGTCTGCATGGAGCTGCCCGCTC...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612760.1
ENST00000631971.1
CDS-3UTR CCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCAATGGTGAGGAGAAGCTaGCAGGAGGCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPMVRRS*QEACTS
Trigger: GGAGGTGCAGGCCTCCTGCCAGCTTCTCCTCACCAT...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGCTGGCTGAGGGTTCTTaGGGGTCTTGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGLAEGS*GSWRSC
Trigger: GCAGCTTCTCCAAGACCCCCAAGAACCCTCAGCCAG...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTACGGGTCCCCTGGGCTaGGCTGCCTGCCTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLTGPLG*AACLSA
Trigger: TGCAGAGAGGCAGGCAGCCCAGCCCAGGGGACCCGT...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTGAGGAACGGGTCCCCTaGGCTGGGCTGCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLEERVP*AGLPAS
Trigger: AGAGGCAGGCAGCCCAGCCCAGGGGACCCGTTCCTC...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTAGGTGCTGAGCCATGCTaGGCCCTTCAGACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLGAEPC*ALQTWL
Trigger: CAGCCAGGTCTGAAGGGCTCAGCATGGCTCAGCACC...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAAGGTGCGGCCGTCCCTaGCTCCAGCACATGAACACT +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTRCGRP*LQHMNT
Trigger: AGTGTTCATGTGCTGGAGTCAGGGACGGCCGCACCT...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTGGCCGTGTGTGGGCCTaGGGTGCGCACTGTCTACTC +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLGRVWA*GAHCLL
Trigger: GAGTAGACAGTGCGCACCTCAGGCCCACACACGGCC...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTAACTGGGGATCCTCTGTaGTTGGGCAGCCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLTGDPL*LGSPPC
Trigger: GCACGGTGGGCTGCCCAAGCACAGAGGATCCCCAGT...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAAGCTGGCAGGAGGCCTaGACCTCCTGGGATAGACCT +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTSWQEA*TSWDRP
Trigger: AGGTCTATCCCAGGAGGTGCAGGCCTCCTGCCAGCT...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTATCGAGAGCAATGCCATaGCGCAGCTCCCGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLSRAMP*RSSRQG
Trigger: TCCCTGGCGGGAGCTGCGCCATGGCATTGCTCTCGA...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTTCTGGGCCGCAGAACTaGAATGTCCCGCGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLSGPQN*NVPRLG
Trigger: GCCGAGGCGCGGGACATTCCAGTTCTGCGGCCCAGA...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGGGACTTGCTGACTACTaGAGTGAGCGGGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGGLADY*SERAAV
Trigger: AACAGCTGCCCGCTCACTCCAGTAGTCAGCAAGTCC...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAGGGATCTCGGAGGACTaGGGATCCTCTGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTGISED*GSSVLG
Trigger: CCCAAGCACAGAGGATCCCCAGTCCTCCGAGATCCC...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAATGGTGAGGAGAAGCTaGCAGGAGGCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTMVRRS*QEACTS
Trigger: GGAGGTGCAGGCCTCCTGCCAGCTTCTCCTCACCAT...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGGGTTCTTGGGGGTCTTaGAGAAGCTGCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGGSWGS*RSCLLS
Trigger: GGAGAGAAGGCAGCTTCTCCAAGACCCCCAAGAACC...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTGCTGCATGGGAGAAATaGCGGGTGACGAGGCGACCC +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLAAWEK*RVTRRP
Trigger: GGGTCGCCTCGTCACCCGTCATTTCTCCCATGCAGC...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR GCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTACTGGGGATCCTCTGTaGTTGGGCAGCCCACCGTGC +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLTGDPL*LGSPPC
Trigger: GCACGGTGGGCTGCCCAAGCACAGAGGATCCCCAGT...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGGGTCTTGGAGAAGCTaGCTTCTCTCCCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHGSWRS*LLSPSV
Trigger: CACAGAGGGGGAGAGAAGGCAGCTTCTCCAAGACCC...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTAGGGATCTCGGAGGACTaGGGATCCTCTGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLGISED*GSSVLG
Trigger: CCCAAGCACAGAGGATCCCCAGTCCTCCGAGATCCC...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTAATGGTGAGGAGAAGCTaGCAGGAGGCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLMVRRS*QEACTS
Trigger: GGAGGTGCAGGCCTCCTGCCAGCTTCTCCTCACCAT...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACACTTCCAGGCAGGGCCTaGGAACAGATTCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTLPGRA*EQIPSM
Trigger: CATGGAGGGAATCTGTTCCCAGGCCCTGCCTGGAAG...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCAACTCCAAGCAACTCATaGTGGGGATCTCGGAGGACT +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPTPSNS*WGSRRT
Trigger: AGTCCTCCGAGATCCCCATCATGAGTTGCTTGGAGT...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTCCCTTCAGACCTGGCTaGGGGTTCTTGGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLPFRPG*GFLGVL
Trigger: CAAGACCCCCAAGAACCCTCAGCCAGGTCTGAAGGG...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACACCTGACTCCAGCACATaGACACTGTGGACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTPDSST*TLWTVH
Trigger: GTGGACTGTCCACAGTGTTCATGTGCTGGAGTCAGG...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGATTTGCCACAGGCAATaGCTGGTTCAAGAGGAACGG +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGICHRQ*LVQEER
Trigger: CCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAAT...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTAGCTGGCAGGAGGCCTaGACCTCCTGGGATAGACCT +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLSWQEA*TSWDRP
Trigger: AGGTCTATCCCAGGAGGTGCAGGCCTCCTGCCAGCT...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATAAATTCCGGGGATCCTaGATCCCATCGAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHKFRGS*IPSRTS
Trigger: GCTCGTCCTCGATGGGATCCAGGATCCCCGGAATTT...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTGAGGCCTGCACCTCCTaGGATAGACCTGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLEACTS*DRPEPS
Trigger: TGAGGGCTCAGGTCTATCCCAGGAGGTGCAGGCCTC...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAGCCACAGGCAATGACTaGTTCAAGAGGAACGGGTCC +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTATGND*FKRNGS
Trigger: GGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGC...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTGCCACGAGCCAGCCCTaGTGGGCTTTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLATSQP*WALVCK
Trigger: TTTACAGACCAAAGCCCAGCAGGGCTGGCTCGTGGC...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCAACGAGCCAGCCCTGCTaGGCTTTGGTCTGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPTSQPC*ALVCKN
Trigger: ATTTTTACAGACCAAAGCCCAGCAGGGCTGGCTCGT...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAATTTGCCACAGGCAATaGCTGGTTCAAGAGGAACGG +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTICHRQ*LVQEER
Trigger: CCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAAT...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTAATTGTGTCCAGTTTCTaGCGTCTGGGCCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLIVSSF*RLGRRT
Trigger: AGTTCTGCGGCCCAGACGGCAGAAACTGGACACAAT...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGAACCCTTCCTCTGGCTaGAAATGGAGTGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGNPSSG*KWSEEE
Trigger: TTCTTCTTCACTCCATTTGCAGCCAGAGGAAGGGTT...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTTGTGTGGGCCTGAGGTaGGCACTGTCTACTCCACAT +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLCVGLR*ALSTPH
Trigger: ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACA...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTCCAGTTTCTGCCGTCTaGGCCGCAGAACTGGAATGT +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLPVSAV*AAELEC
Trigger: ACATTCCAGTTCTGCGGCCCAGACGGCAGAAACTGG...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAACGAGCCAGCCCTGCTaGGCTTTGGTCTGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTTSQPC*ALVCKN
Trigger: ATTTTTACAGACCAAAGCCCAGCAGGGCTGGCTCGT...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCTCTGGCTGCAAATaGAGTGAAGAAGAATTCCTG +
Preference number: 4 (lower is better)
Translates to: HILIHTFATGNDWFKRNGSSGCK*SEEEFL
Trigger: CAGGAATTCTTCTTCACTCCATTTGCAGCCAGAGGA...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATCTGTAAAAATCCGGTaGGGTCATCAGTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPSVKIR*GHQWRT
Trigger: TGTTCTCCACTGATGACCTCACCGGATTTTTACAGA...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTATTGTGTCCAGTTTCTaGCGTCTGGGCCGCAGAACT +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLIVSSF*RLGRRT
Trigger: AGTTCTGCGGCCCAGACGGCAGAAACTGGACACAAT...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCAAACCCTTCCTCTGGCTaGAAATGGAGTGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: DSLHARPSWLPMEINKSPNPSSG*KWSEEE
Trigger: TTCTTCTTCACTCCATTTGCAGCCAGAGGAAGGGTT...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTGGCTGCCTGCCTCTCTaGAGATGTCTAAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLGCLPL*RCLNFP
Trigger: GGGAAAGTTTAGACATCTGCAGAGAGGCAGGCAGCC...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTCCGATTACCCACAACTaGACTACCGAGCTACGACCA +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLPITHN*TTELRP
Trigger: TGGTCGTAGCTCGGTAGTCCAGTTGTGGGTAATCGG...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CCA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTAACGAGCCAGCCCTGCTaGGCTTTGGTCTGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLTSQPC*ALVCKN
Trigger: ATTTTTACAGACCAAAGCCCAGCAGGGCTGGCTCGT...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR TCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACATCTGTAAAAATCCGGTaGGGTCATCAGTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTSVKIR*GHQWRT
Trigger: TGTTCTCCACTGATGACCTCACCGGATTTTTACAGA...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR GCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAAACCCTTCCTCTGGCTaGAAATGGAGTGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTNPSSG*KWSEEE
Trigger: TTCTTCTTCACTCCATTTGCAGCCAGAGGAAGGGTT...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTACGAGCCAGCCCTGCTaGGCTTTGGTCTGTAAAAAT +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLTSQPC*ALVCKN
Trigger: ATTTTTACAGACCAAAGCCCAGCAGGGCTGGCTCGT...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACATGCTAGGCCATCATaGCTTCCCATGGAAATTAAC +
Preference number: 4 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLHARPS*LPMEIN
Trigger: GTTAATTTCCATGGGAAGCCATGATGGCCTAGCATG...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTCATGCTAGGCCATCATaGCTTCCCATGGAAATTAAC +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLHARPS*LPMEIN
Trigger: GTTAATTTCCATGGGAAGCCATGATGGCCTAGCATG...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACACATCATGGCTTCCCATaGAAATTAACAAATCACCAT +
Preference number: 4 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTHHGFP*KLTNHH
Trigger: ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATG...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CCA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTCATCATGGCTTCCCATaGAAATTAACAAATCACCAT +
Preference number: 4 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLHHGFP*KLTNHH
Trigger: ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATG...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS CCA 90 bp CGGAGCAGCTCGGCCCGCTTCCCCTGCAGCCCAGCTTTACCCGCCTaGAGCAGGAGCCGGGCCACAGAGCGGCGGGCGGCCTGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: RSSSARFPCSPALPA*SRSRATERRAACRA
Trigger: GGCTCTGCAGGCCGCCCGCCGCTCTGTGGCCCGGCTCCTGCTCCAGGCGGGTAAAGCTGGGCTGCAGGGGAAGCGGGCCGAGCTGCTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS GCA 90 bp GCAATGCCATGGCGCAGCTCCCGCCAGGGACTCGATGCCCCTTGCTaGGTCCCCGGGAGCGGTAACCCGCGCCGCAGTTCGCTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: AMPWRSSRQGLDAPC*VPGSGNPRRSSLPG
Trigger: GCCTGGGAGCGAACTGCGGCGCGGGTTACCGCTCCCGGGGACGCAGCAAGGGGCATCGAGTCCCTGGCGGGAGCTGCGCCATGGCATTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CAA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATGGGACTCGATGCCCCTaGCTGCGTCCCCGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHGTRCP*LRPRER
Trigger: CCGCTCCCGGGGACGCAGCAAGGGGCATCGAGTCCC...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CAA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGGCCCCCGCGCTGGACTaGCTGACTACTGGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALAPALD*LTTGVS
Trigger: GCTCACTCCAGTAGTCAGCAAGTCCAGCGCGGGGGC...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATGGGGATCCTCTGTGCTaGGGCAGCCCACCGTGCCGG +
Preference number: 5 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHGDPLC*GSPPCR
Trigger: CCGGCACGGTGGGCTGCCCAAGCACAGAGGATCCCC...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS GCA 90 bp AGAGCAATGCCATGGCGCAGCTCCCGCCAGGGACTCGATGCCCCTTaGTGCGTCCCCGGGAGCGGTAACCCGCGCCGCAGTTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: RAMPWRSSRQGLDAP*CVPGSGNPRRSSLP
Trigger: TGGGAGCGAACTGCGGCGCGGGTTACCGCTCCCGGGGACGCAGCAAGGGGCATCGAGTCCCTGGCGGGAGCTGCGCCATGGCATTGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CAA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACGCCCCCGCGCTGGACTaGCTGACTACTGGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYAPALD*LTTGVS
Trigger: GCTCACTCCAGTAGTCAGCAAGTCCAGCGCGGGGGC...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS GCA 90 bp TTACCCGCCTGGAGCAGGAGCCGGGCCACAGAGCGGCGGGCGGCCTaGAGAGCCAGGAGACACGGGGTCATGCCAAACAGAAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LPAWSRSRATERRAA*RARRHGVMPNRSSS
Trigger: GCTGGAGCTTCTGTTTGGCATGACCCCGTGTCTCCTGGCTCTGCAGGCCGCCCGCCGCTCTGTGGCCCGGCTCCTGCTCCAGGCGGGTAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS TCA 90 bp GGCTCCCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTaGCTCCAGCACATGAACACTGTGGACAGTCCACGTCAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GSPHTGAGGGRCGRP*LQHMNTVDSPRQPS
Trigger: TGAGGGCTGACGTGGACTGTCCACAGTGTTCATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS GCA 90 bp CCCCGGCCTCTCTCCAAGGCCGGGGCCGCAGCGGGCTCACCTCCATaGAGACACCCTGGTGGACCTGGTAGCGGCACATTGTGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: PRPLSKAGAAAGSPP*RHPGGPGSGTLCPV
Trigger: AACTGGACACAATGTGCCGCTACCAGGTCCACCAGGGTGTCTGCATGGAGGTGAGCCCGCTGCGGCCCCGGCCTTGGAGAGAGGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CAA 90 bp GCCTGCGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGCAGCCCTGCTGGGCTTaGGTCTGTAAAAATCCGGTG +
Preference number: 5 (lower is better)
Translates to: ACAQGPRAGPCVGLRCALQPCWA*VCKNPV
Trigger: CACCGGATTTTTACAGACCAAAGCCCAGCAGGGCTG...CAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCGCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS GCA 90 bp CCACAGAGCGGCGGGCGGCCTGCAGAGCCAGGAGACACGGGGTCATaGCAAACAGAAGCTCCAGCCGAGAGGTCGGCACCAGGTCATCCA +
Preference number: 5 (lower is better)
Translates to: PQSGGRPAEPGDTGS*QTEAPAERSAPGHP
Trigger: TGGATGACCTGGTGCCGACCTCTCGGCTGGAGCTTCTGTTTGGCATGACCCCGTGTCTCCTGGCTCTGCAGGCCGCCCGCCGCTCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS CCA 90 bp GTAGCGGCACATTGTGTCCAGTTTCTGCCGTCTGGGCCGCAGAACTaGAATGTCCCGCGCCTCGGCCATCCGGAGCAGCTCGGCCCGCTT +
Preference number: 5 (lower is better)
Translates to: VAAHCVQFLPSGPQN*NVPRLGHPEQLGPL
Trigger: AAGCGGGCCGAGCTGCTCCGGATGGCCGAGGCGCGGGACATTCCAGTTCTGCGGCCCAGACGGCAGAAACTGGACACAATGTGCCGCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATCAGCCCTGCTGGGCTTaGGTCTGTAAAAATCCGGTG +
Preference number: 5 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHQPCWA*VCKNPV
Trigger: CACCGGATTTTTACAGACCAAAGCCCAGCAGGGCTG...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp CGCTCAAGGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACACGTCAGCCCTCATTTaGCCTCTCTTTCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RSRPQGGAVCGPEVRTVYTSALI*PLFLWA
Trigger: GGCCCAGAGAAAGAGAGGCAAAATGAGGGCTGACGT...GTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCCTTGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATACGTCAGCCCTCATTTaGCCTCTCTTTCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHTSALI*PLFLWA
Trigger: GGCCCAGAGAAAGAGAGGCAAAATGAGGGCTGACGT...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS CCA 90 bp CCTGGTGGACCTGGTAGCGGCACATTGTGTCCAGTTTCTGCCGTCTaGGCCGCAGAACTGGAATGTCCCGCGCCTCGGCCATCCGGAGCA +
Preference number: 5 (lower is better)
Translates to: PGGPGSGTLCPVSAV*AAELECPAPRPSGA
Trigger: TGCTCCGGATGGCCGAGGCGCGGGACATTCCAGTTCTGCGGCCCAGACGGCAGAAACTGGACACAATGTGCCGCTACCAGGTCCACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGCCTGGTAGCGGCACATaGTGTCCAGTTTCTGCCGTC +
Preference number: 5 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGPGSGT*CPVSAV
Trigger: GACGGCAGAAACTGGACACAATGTGCCGCTACCAGG...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGCCCTGCTGGGCTTaGGTCTGTAAAAATCCGGTG +
Preference number: 5 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHQPCWA*VCKNPV
Trigger: CACCGGATTTTTACAGACCAAAGCCCAGCAGGGCTG...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp CAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATCAGGGGGGTTCTTGGGGGTCTaGGAGAAGCTGCCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: QGGAVCGPEVRTVYSTSGGFLGV*EKLPSL
Trigger: GAGAGAAGGCAGCTTCTCCAAGACCCCCAAGAACCC...CCCTGATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp GGCCCCAGGGCGGGGCCGTGTGTGGGCCTGAGGTGCGCACTGTCTACTCCACATACGTCAGCCCTCATTTaGCCTCTCTTTCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GPRAGPCVGLRCALSTPHTSALI*PLFLWA
Trigger: GGCCCAGAGAAAGAGAGGCAAAATGAGGGCTGACGT...ATGTGGAGTAGACAGTGCGCACCTCAGGCCCACACACGGCCCCGCCCTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS GCA 90 bp GGATCTCGGAGGACTGGGGATCCTCTGTGCTTGGGCAGCCCACCGTaGCGGCCACGAGCCAGCCCTGCTGGGCTTTGGTCTGTAAAAATC +
Preference number: 5 (lower is better)
Translates to: GSRRTGDPLCLGSPP*RPRASPAGLWSVKI
Trigger: GATTTTTACAGACCAAAGCCCAGCAGGGCTGGCTCGTGGCCGGCACGGTGGGCTGCCCAAGCACAGAGGATCCCCAGTCCTCCGAGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS CCA 90 bp CCGAGCTCTCTCGGACAGGAACAAACAGCCCCGATTACCCACAACTaGACTACCGAGCTACGACCACCCGCTCCCAGGCTCCCACGTGGG +
Preference number: 5 (lower is better)
Translates to: PSSLGQEQTAPITHN*TTELRPPAPRLPRG
Trigger: CCCACGTGGGAGCCTGGGAGCGGGTGGTCGTAGCTCGGTAGTCCAGTTGTGGGTAATCGGGGCTGTTTGTTCCTGTCCGAGAGAGCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS TCA 90 bp CTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATaGACACTGTGGACAGTCCACGTCAGCCCTCATTTTGCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LEPAEAGAAVPDSST*TLWTVHVSPHFASL
Trigger: AAGAGAGGCAAAATGAGGGCTGACGTGGACTGTCCACAGTGTTCATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp CCCGCACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATTTCTCATACACACATTaGCCACAGGCAATGACTGGT +
Preference number: 5 (lower is better)
Translates to: PAHWSRRRQVRPSLTPAHFSYTH*PQAMTG
Trigger: ACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAA...ATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp GATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCAGGGGATCCTCTGTGCTaGGGCAGCCCACCGTGCCGG +
Preference number: 5 (lower is better)
Translates to: DSLHARPSWLPMEINKSPGDPLC*GSPPCR
Trigger: CCGGCACGGTGGGCTGCCCAAGCACAGAGGATCCCC...TGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTAGGGACTCGATGCCCCTaGCTGCGTCCCCGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLGTRCP*LRPRER
Trigger: CCGCTCCCGGGGACGCAGCAAGGGGCATCGAGTCCC...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS-3UTR CAA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGGGGATCCTCTGTGCTaGGGCAGCCCACCGTGCCGG +
Preference number: 5 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHGDPLC*GSPPCR
Trigger: CCGGCACGGTGGGCTGCCCAAGCACAGAGGATCCCC...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS GCA 90 bp GAAGCTGCCTTCTCTCCCCCTCTGTGGGGAAACCCTTCCTCTGGCTaGAAATGGAGTGAAGAAGAATTCCTGCAGCCACAGAGACGTTCA +
Preference number: 5 (lower is better)
Translates to: EAAFSPPLWGNPSSG*KWSEEEFLQPQRRS
Trigger: TGAACGTCTCTGTGGCTGCAGGAATTCTTCTTCACTCCATTTGCAGCCAGAGGAAGGGTTTCCCCACAGAGGGGGAGAGAAGGCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACAGCCCCCGCGCTGGACTaGCTGACTACTGGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTAPALD*LTTGVS
Trigger: GCTCACTCCAGTAGTCAGCAAGTCCAGCGCGGGGGC...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp ACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGTCCCCTGGGCTGGGCTTCTCATACACACATTaGCCACAGGCAATGACTGGT +
Preference number: 5 (lower is better)
Translates to: TFATGNDWFKRNGSPGLGFSYTH*PQAMTG
Trigger: ACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAA...GCCCAGCCCAGGGGACCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGCCTGGTAGCGGCACATaGTGTCCAGTTTCTGCCGTC +
Preference number: 5 (lower is better)
Translates to: HILIHTFATGNDWFKRNGPGSGT*CPVSAV
Trigger: GACGGCAGAAACTGGACACAATGTGCCGCTACCAGG...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTAGCCCCCGCGCTGGACTaGCTGACTACTGGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLAPALD*LTTGVS
Trigger: GCTCACTCCAGTAGTCAGCAAGTCCAGCGCGGGGGC...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp CACATTCTCATACACACATTTGCCACAGGCAATGACTGGTTCAAGAGGAACGGGGGGTTCTTGGGGGTCTaGGAGAAGCTGCCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: HILIHTFATGNDWFKRNGGFLGV*EKLPSL
Trigger: GAGAGAAGGCAGCTTCTCCAAGACCCCCAAGAACCC...CCCGTTCCTCTTGAACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAATGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGGGTTCTTGGGGGTCTaGGAGAAGCTGCCTTCTCTC +
Preference number: 5 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHGFLGV*EKLPSL
Trigger: GAGAGAAGGCAGCTTCTCCAAGACCCCCAAGAACCC...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp ATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACCTGGTAGCGGCACATaGTGTCCAGTTTCTGCCGTC +
Preference number: 5 (lower is better)
Translates to: MLGHHGFPWKLTNHHVLLPGSGT*CPVSAV
Trigger: GACGGCAGAAACTGGACACAATGTGCCGCTACCAGG...TAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATACGTCAGCCCTCATTTaGCCTCTCTTTCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHTSALI*PLFLWA
Trigger: GGCCCAGAGAAAGAGAGGCAAAATGAGGGCTGACGT...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp TTAACAAATCACCATGTCCTACTACAGGTCCAACATCACAACAGGAAACAGCTTCAGCCCTGCTGGGCTTaGGTCTGTAAAAATCCGGTG +
Preference number: 5 (lower is better)
Translates to: LTNHHVLLQVQHHNRKQLQPCWA*VCKNPV
Trigger: CACCGGATTTTTACAGACCAAAGCCCAGCAGGGCTG...AAGCTGTTTCCTGTTGTGATGTTGGACCTGTAGTAGGACATGGTGATTTGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp GCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATGTCCTACTACATTCTCATACACACATTaGCCACAGGCAATGACTGGT +
Preference number: 5 (lower is better)
Translates to: ARPSWLPMEINKSPCPTTFSYTH*PQAMTG
Trigger: ACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAA...TGTAGTAGGACATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS-3UTR CAA 90 bp ATTCCCTCCATGCTAGGCCATCATGGCTTCCCATGGAAATTAACAAATCACCATTTCTCATACACACATTaGCCACAGGCAATGACTGGT +
Preference number: 5 (lower is better)
Translates to: IPSMLGHHGFPWKLTNHHFSYTH*PQAMTG
Trigger: ACCAGTCATTGCCTGTGGCAAATGTGTGTATGAGAA...ATGGTGATTTGTTAATTTCCATGGGAAGCCATGATGGCCTAGCATGGAGGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS CCA 72 bp TCGGCCCGCTTCCCCTGCAGCCCAGCTTTACCCGCCTaGAGCAGGAGCCGGGCCACAGAGCGGCGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: SARFPCSPALPA*SRSRATERRAA
Trigger: GGCCGCCCGCCGCTCTGTGGCCCGGCTCCTGCTCCAGGCGGGTAAAGCTGGGCTGCAGGGGAAGCGGGCCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS GCA 72 bp CCATGGCGCAGCTCCCGCCAGGGACTCGATGCCCCTTaGTGCGTCCCCGGGAGCGGTAACCCGCGCCGCAGT +
Preference number: 6 (lower is better)
Translates to: PWRSSRQGLDAP*CVPGSGNPRRS
Trigger: ACTGCGGCGCGGGTTACCGCTCCCGGGGACGCAGCAAGGGGCATCGAGTCCCTGGCGGGAGCTGCGCCATGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS GCA 72 bp GCGACCCCAGGTCGCGCCCCGGACGGTCGAGAGCAATaGCATGGCGCAGCTCCCGCCAGGGACTCGATGCCC +
Preference number: 6 (lower is better)
Translates to: ATPGRAPDGREQ*HGAAPARDSMP
Trigger: GGGCATCGAGTCCCTGGCGGGAGCTGCGCCATGGCATTGCTCTCGACCGTCCGGGGCGCGACCTGGGGTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS CCA 72 bp ATCGAGGACGAGCCACAACTGCTGGGGGTCGTCGCCTaGGCTCGCCTCCCCGGCCTCTCTCCAAGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: IEDEPQLLGVVA*ARLPGLSPRPG
Trigger: CCCCGGCCTTGGAGAGAGGCCGGGGAGGCGAGCCCAGGCGACGACCCCCAGCAGTTGTGGCTCGTCCTCGAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS GCA 72 bp TGGAGCAGGAGCCGGGCCACAGAGCGGCGGGCGGCCTaGAGAGCCAGGAGACACGGGGTCATGCCAAACAGA +
Preference number: 6 (lower is better)
Translates to: WSRSRATERRAA*RARRHGVMPNR
Trigger: TCTGTTTGGCATGACCCCGTGTCTCCTGGCTCTGCAGGCCGCCCGCCGCTCTGTGGCCCGGCTCCTGCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS CCA 72 bp GGATCCTGGATCCCATCGAGGACGAGCCACAACTGCTaGGGGTCGTCGCCTGGGCTCGCCTCCCCGGCCTCT +
Preference number: 6 (lower is better)
Translates to: GSWIPSRTSHNC*GSSPGLASPAS
Trigger: AGAGGCCGGGGAGGCGAGCCCAGGCGACGACCCCCAGCAGTTGTGGCTCGTCCTCGATGGGATCCAGGATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS TCA 72 bp GCGCCGCAGTTCGCTCCCAGGCTCCCAACACCGAGGTaGAGGGTACTCGACAGCCGTCTCCGCCGAGCTCTC +
Preference number: 6 (lower is better)
Translates to: APQFAPRLPTPR*RVLDSRLRRAL
Trigger: GAGAGCTCGGCGGAGACGGCTGTCGAGTACCCTTCACCTCGGTGTTGGGAGCCTGGGAGCGAACTGCGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS GCA 72 bp GGCGGGCGGCCTGCAGAGCCAGGAGACACGGGGTCATaGCAAACAGAAGCTCCAGCCGAGAGGTCGGCACCA +
Preference number: 6 (lower is better)
Translates to: GGRPAEPGDTGS*QTEAPAERSAP
Trigger: TGGTGCCGACCTCTCGGCTGGAGCTTCTGTTTGGCATGACCCCGTGTCTCCTGGCTCTGCAGGCCGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS GCA 72 bp AGGACTGGGGATCCTCTGTGCTTGGGCAGCCCACCGTaGCGGCCACGAGCCAGCCCTGCTGGGCTTTGGTCT +
Preference number: 6 (lower is better)
Translates to: RTGDPLCLGSPP*RPRASPAGLWS
Trigger: AGACCAAAGCCCAGCAGGGCTGGCTCGTGGCCGGCACGGTGGGCTGCCCAAGCACAGAGGATCCCCAGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS TCA 72 bp CACACTGGAGCCGGCGGAGGCAGGTGCGGCCGTCCCTaGCTCCAGCACATGAACACTGTGGACAGTCCACGT +
Preference number: 6 (lower is better)
Translates to: HTGAGGGRCGRP*LQHMNTVDSPR
Trigger: ACGTGGACTGTCCACAGTGTTCATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGCCGGCTCCAGTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS TCA 72 bp CTGGGCCTGAAGACAGCCCTGGGTGCTGAGCCATGCTaGGCCCTTCAGACCTGGCTGAGGGTTCTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: LGLKTALGAEPC*ALQTWLRVLGG
Trigger: ACCCCCAAGAACCCTCAGCCAGGTCTGAAGGGCTCAGCATGGCTCAGCACCCAGGGCTGTCTTCAGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS GCA 72 bp CTTGGGCAGCCCACCGTGCCGGCCACGAGCCAGCCCTaGTGGGCTTTGGTCTGTAAAAATCCGGTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: LGQPTVPATSQP*WALVCKNPVRS
Trigger: TGACCTCACCGGATTTTTACAGACCAAAGCCCAGCAGGGCTGGCTCGTGGCCGGCACGGTGGGCTGCCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS CAA 90 bp CGGGCAGCTCCATGCAGACACCCTGGTGGACCTGGTAGCGGCACATaGTGTCCAGTTTCTGCCGTCTGGGCCGCAGAACTGGAATGTCCC +
Preference number: 6 (lower is better)
Translates to: RAAPCRHPGGPGSGT*CPVSAVWAAELECP
Trigger: GGGACATTCCAGTTCTGCGGCCCAGACGGCAGAAACTGGACACAATGTGCCGCTACCAGGTCCACCAGGGTGTCTGCATGGAGCTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612760.1
ENST00000631971.1
CDS CCA 72 bp CACCTCCATAGCCCCCGCGCTGGACTTGCTGACTACTaGAGTGAGCGGGCAGCTGTTTCTCCGGCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: HLHSPRAGLADY*SERAAVSPAGD
Trigger: ATCACCAGCCGGAGAAACAGCTGCCCGCTCACTCCAGTAGTCAGCAAGTCCAGCGCGGGGGCTATGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS CAA 90 bp GGCTCACCTCCATGCAGACACCCTGGTGGACCTGGTAGCGGCACATaGTGTCCAGTTTCTGCCGTCTGGGCCGCAGAACTGGAATGTCCC +
Preference number: 6 (lower is better)
Translates to: GSPPCRHPGGPGSGT*CPVSAVWAAELECP
Trigger: GGGACATTCCAGTTCTGCGGCCCAGACGGCAGAAACTGGACACAATGTGCCGCTACCAGGTCCACCAGGGTGTCTGCATGGAGGTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS CAA 90 bp TCAGTGGAGAACACGTCCATCACCTCCATAGCCCCCGCGCTGGACTaGCTGACTACTGGAGTGAGCGGGCAGCTGTTTCTCCGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SVENTSITSIAPALD*LTTGVSGQLFLRLV
Trigger: CACCAGCCGGAGAAACAGCTGCCCGCTCACTCCAGTAGTCAGCAAGTCCAGCGCGGGGGCTATGGAGGTGATGGACGTGTTCTCCACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS CAA 90 bp TCAGTGGAGAACACGTCCATCACCTCCATAGCCCCCGCGCTGGACTaGCTGACTACTGGAGTGAGCGGGCAGCTCCATGCAGACACCCTG +
Preference number: 6 (lower is better)
Translates to: SVENTSITSIAPALD*LTTGVSGQLHADTL
Trigger: CAGGGTGTCTGCATGGAGCTGCCCGCTCACTCCAGTAGTCAGCAAGTCCAGCGCGGGGGCTATGGAGGTGATGGACGTGTTCTCCACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612760.1
ENST00000631971.1
CDS TCA 72 bp GCGGAGGCAGGTGCGGCCGTCCCTGACTCCAGCACATaGACACTGTGGACAGTCCACGTCAGCCCTCATTTT +
Preference number: 6 (lower is better)
Translates to: AEAGAAVPDSST*TLWTVHVSPHF
Trigger: AAAATGAGGGCTGACGTGGACTGTCCACAGTGTTCATGTGCTGGAGTCAGGGACGGCCGCACCTGCCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS CCA 72 bp CTCGGACAGGAACAAACAGCCCCGATTACCCACAACTaGACTACCGAGCTACGACCACCCGCTCCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: LGQEQTAPITHN*TTELRPPAPRL
Trigger: GAGCCTGGGAGCGGGTGGTCGTAGCTCGGTAGTCCAGTTGTGGGTAATCGGGGCTGTTTGTTCCTGTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS CCA 72 bp AACTCCAAGCAACTCATGATGGGGATCTCGGAGGACTaGGGATCCTCTGTGCTTGGGCAGCCCACCGTGCCG +
Preference number: 6 (lower is better)
Translates to: NSKQLMMGISED*GSSVLGQPTVP
Trigger: CGGCACGGTGGGCTGCCCAAGCACAGAGGATCCCCAGTCCTCCGAGATCCCCATCATGAGTTGCTTGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS CAA 72 bp AACACGTCCATCACCTCCATAGCCCCCGCGCTGGACTaGCTGACTACTGGAGTGAGCGGGCAGCTCCATGCA +
Preference number: 6 (lower is better)
Translates to: NTSITSIAPALD*LTTGVSGQLHA
Trigger: TGCATGGAGCTGCCCGCTCACTCCAGTAGTCAGCAAGTCCAGCGCGGGGGCTATGGAGGTGATGGACGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612760.1
ENST00000631971.1
CDS CAA 72 bp AACACGTCCATCACCTCCATAGCCCCCGCGCTGGACTaGCTGACTACTGGAGTGAGCGGGCAGCTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: NTSITSIAPALD*LTTGVSGQLFL
Trigger: GAGAAACAGCTGCCCGCTCACTCCAGTAGTCAGCAAGTCCAGCGCGGGGGCTATGGAGGTGATGGACGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611231.2
ENST00000614766.5
CDS CCA 72 bp CCCCCTCTGTGGGGAAACCCTTCCTCTGGCTGCAAATaGAGTGAAGAAGAATTCCTGCAGCCACAGAGACGT +
Preference number: 6 (lower is better)
Translates to: PPLWGNPSSGCK*SEEEFLQPQRR
Trigger: ACGTCTCTGTGGCTGCAGGAATTCTTCTTCACTCCATTTGCAGCCAGAGGAAGGGTTTCCCCACAGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1
CDS GCA 72 bp TTCTCTCCCCCTCTGTGGGGAAACCCTTCCTCTGGCTaGAAATGGAGTGAAGAAGAATTCCTGCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: FSPPLWGNPSSG*KWSEEEFLQPQ
Trigger: CTGTGGCTGCAGGAATTCTTCTTCACTCCATTTGCAGCCAGAGGAAGGGTTTCCCCACAGAGGGGGAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000611231.2
ENST00000612760.1
ENST00000614766.5
ENST00000631971.1