Pregenerated sensors for MRI1 (Homo sapiens)
Ensembl gene IDs: ENSG00000037757Ensembl transcript IDs: ENST00000040663.8, ENST00000319545.12, ENST00000588526.5, ENST00000589290.1, ENST00000591688.5, ENST00000593245.5
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTGGACGGTCAGCTTTTaGGTAGCCATTCAAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: VLGSRWKALSELPALGTSWTVSF*VAIQEM Trigger: CATTTCTTGAATGGCTACCCAAAAGCTGACCGTCCA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| 3UTR CCA 72 bp | TCAGGATTTGAATCTGGGCAGCCTGGCTCTAGGTGCTaGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: SGFESGQPGSRC*ALDGRPCLSSL Trigger: CAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCACCTAGAGCCAGGCTGCCCAGATTCAAATCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| 3UTR TCA 72 bp | GGAGAATCGCTTGAACCGGGGAGGCACAGGTTTCAGTaGGCTGAGATCTCGCCTCTACATTCCAGCCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: GESLEPGRHRFQ*AEISPLHSSLG Trigger: ACCCAGGCTGGAATGTAGAGGCGAGATCTCAGCTCACTGAAACCTGTGCCTCCCCGGTTCAAGCGATTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| 3UTR CCA 72 bp | GAGCTCCCTGCACTAGGAACAAGTGTGGTCAGGGGCTaGACGGTCAGCTTTTGGGTAGCCATTCAAGAAATG | + |
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Preference number: 3 (lower is better) Translates to: ELPALGTSVVRG*TVSFWVAIQEM Trigger: CATTTCTTGAATGGCTACCCAAAAGCTGACCGTCCAGCCCCTGACCACACTTGTTCCTAGTGCAGGGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| 3UTR-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCTGGACGGTCAGCTTTaGGGTAGCCATTCAAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: VLGSRWKALSELPALGTSLDGQL*GSHSRN Trigger: ATTTCTTGAATGGCTACCCAAAAGCTGACCGTCCAG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| 3UTR CCA 72 bp | GCTCTTCCTATGTTACCCAAACTGGTCTCAAACACCTaGGCTCAAGGGATCCTCCCAAAGTGCTGGAATTAC | + |
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Preference number: 3 (lower is better) Translates to: ALPMLPKLVSNT*AQGILPKCWNY Trigger: GTAATTCCAGCACTTTGGGAGGATCCCTTGAGCCCAGGTGTTTGAGACCAGTTTGGGTAACATAGGAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| 3UTR-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCATTCAAGAAATGTATaGAAAAACCTAGAGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: VLGSRWKALSELPALGTSHSRNV*KNLERQ Trigger: CTGCCTCTCTAGGTTTTTCAATACATTTCTTGAATG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGCCTCCCAGGCCTGGTaGACCGAGCCCACCGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSASQAW*TEPTAS Trigger: CGAGGCGGTGGGCTCGGTGCACCAGGCCTGGGAGGC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTATGGCCTCCCAGGCCTaGTGCACCGAGCCCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSMASQA*CTEPTA Trigger: GGCGGTGGGCTCGGTGCACCAGGCCTGGGAGGCCAT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCGCCCCGCACCTTCATaGCGCGGATGGCCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSRPAPS*RGWPPR Trigger: CCTGGGAGGCCATCCGCGCCATGAAGGTGCGGGGCG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCGGTGGGCCGGGCGGTaGCGAGGAAGCTCAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSRWAGR*RGSSAC Trigger: ACAAGCTGAGCTTCCTCGTCACCGCCCGGCCCACCG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTACCCGCTCCAGGAGGTaGCGGGCTCCTAGGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSTRSRR*RAPRSP Trigger: TGGGGACCTAGGAGCCCGCCACCTCCTGGAGCGGGT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000040663.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTCACCTTGCCACCGCTaGGGGCCACCCGCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSSPCHR*GPPAPG Trigger: TCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGGTGA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000040663.8 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCTCCAGGGTCATGGTaGAGCAGCCAAGCCCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPPGSW*SSQAQR Trigger: GCGCTGGGCTTGGCTGCTGCACCATGACCCTGGAGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTTCGGCCTCCCGGGCTaGAACATCAGCCAGGTCGCG | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSFGLPG*NISQVA Trigger: CGCGACCTGGCTGATGTTGCAGCCCGGGAGGCCGAA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTCAGCACAGTCACCTTaGCACCGCTGGGGGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSSAQSP*HRWGPP Trigger: GGGTGGCCCCCAGCGGTGGCAAGGTGACTGTGCTGA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000040663.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCTTCATGGCGCGGATaGCCTCCCAGGCCTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPSWRG*PPRPGA Trigger: TGCACCAGGCCTGGGAGGCCATCCGCGCCATGAAGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGCTGACACGCCCCTATaGGCCATGGCAGCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSADTPL*AMAAAT Trigger: GGTGGCTGCTGCCATGGCCCATAGGGGCGTGTCAGC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCAGGGGCCCTCGCAGTaGCAGTTCCCTCTGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSQGPSQ*QFPLPG Trigger: ACCAGGCAGAGGGAACTGCCACTGCGAGGGCCCCTG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTCTGTGCAGAAGGCATaGTCCAGGCGGCCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSSVQKA*SRRPRL Trigger: CAGCCTGGGCCGCCTGGAGCATGCCTTCTGCACAGA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040663.8 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGGGCCGGGTCTCTGTaGAGAAGGCATGCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSRAGSL*RRHAPG Trigger: GCCTGGAGCATGCCTTCTGCACAGAGACCCGGCCCT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040663.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCGCCCCTATGGGCCATaGCAGCAGCCACCATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSRPYGP*QQPPCC Trigger: ACAGCATGGTGGCTGCTGCCATGGCCCATAGGGGCG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTGGCTGTGTCGCCGTTaGCAACCACGCGGTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSWLCRR*QPRGQL Trigger: GAGCTGACCGCGTGGTTGCCAACGGCGACACAGCCA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCTCCCACTTCAGCCTaGGTAGCTGGGGCTAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPPTSA*VAGARG Trigger: ACCTCTAGCCCCAGCTACTCAGGCTGAAGTGGGAGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGGCGGAGGTTGCAGTaGGCTGAGATGGCACCACTG | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSRRRLQ*AEMAPL Trigger: CAGTGGTGCCATCTCAGCTCACTGCAACCTCCGCCT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGGCAGGAGAGTCGCTTaGACCCAGAAGGCGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSGRRVA*TQKAEV Trigger: AACCTCCGCCTTCTGGGTTCAAGCGACTCTCCTGCC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGGCGGCCCAGGCTGTaGAGTGAGCGAATCACACCT | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSRRPRL*SERITP Trigger: AGGTGTGATTCGCTCACTGCACAGCCTGGGCCGCCT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040663.8 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTTGCCCAGGCTGGAGTaGAGTGGCGCTATCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSLPRLE*SGAISA Trigger: AGCCGAGATAGCGCCACTGCACTCCAGCCTGGGCAA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCGTAGCGGCTCTGCTTaGGCAGCAGCAGCTGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSRSGSA*AAAAGL Trigger: TAGACCAGCTGCTGCTGCCCAAGCAGAGCCGCTACG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGGTGCTTGGCGACAATaGCCAGCTGGTAGGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSGAWRQ*PAGRCP Trigger: TGGGCACCTACCAGCTGGCCATTGTCGCCAAGCACC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCTGGCTCTAGGTGCTaGGCTCTAGATGGAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPGSRC*ALDGRP Trigger: GGGCCTTCCATCTAGAGCCCAGCACCTAGAGCCAGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTATGGAAGGCCCTGTCTaGGCTCCCTGCACTAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSMEGPV*APCTRN Trigger: GTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCAT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCTGGGGCTAGAGGTGTaGGTTCCATGCCCAGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSLGLEV*VPCPAH Trigger: ATGAGCTGGGCATGGAACTCACACCTCTAGCCCCAG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCAGCATGTCCTCGGTaGAGCAGATCACTCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPACPR*SRSLSP Trigger: GGGAGAGAGTGATCTGCTGCACCGAGGACATGCTGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040663.8 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTGGCCAGCTGGTAGGTaGCCACCTTGTTGGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSWPAGR*PPCWLC Trigger: ACACAGCCAACAAGGTGGGCACCTACCAGCTGGCCA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCAGAAGGCGGAGGTTaGAGTGAGCTGAGATGGCAC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPEGGG*SELRWH Trigger: GTGCCATCTCAGCTCACTGCAACCTCCGCCTTCTGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGGTGCCCACCTTGTTaGCTGTGTCGCCGTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSRCPPC*LCRRWQ Trigger: TTGCCAACGGCGACACAGCCAACAAGGTGGGCACCT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGGTCACATGAAGAGCTaGGGGCAGCCACGTAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSGHMKS*GQPRRR Trigger: CCTTCTACGTGGCTGCCCCCAGCTCTTCATGTGACC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCAGTGATGAGGTCGTaGGGGGTGACATCGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPVMRS*GVTSKA Trigger: TGCCTTCGATGTCACCCCCCACGACCTCATCACTGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCCTGGAAGAGATGGTaGTGGTTAGGGCTGTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPWKRW*WLGLSG Trigger: TCCGGACAGCCCTAACCACCACCATCTCTTCCAGGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGTGCTGGGCTCTAGATaGAAGGCCCTGTCTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSVLGSR*KALSEL Trigger: GAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCCGAGGTCAGGAGTTaGAGACCAGCCACGACTAAC | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPEVRS*RPATTN Trigger: GTTAGTCGTGGCTGGTCTCCAACTCCTGACCTCGGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCAGGCTAGGGAGAGCTaGGTTGGTTACATCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSQARES*VGYIWG Trigger: ACCCCAGATGTAACCAACTCAGCTCTCCCTAGCCTG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGGCAGGGGGATCATTTaGGTCAGGAGTTCGAGACCA | + |
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Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSGRGII*VRSSRP Trigger: TGGTCTCGAACTCCTGACTCAAATGATCCCCCTGCC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAAGGGAATGCCATGGTaGTTGGCGACAATGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSKGMPW*LATMAS Trigger: GCTGGCCATTGTCGCCAAGCACCATGGCATTCCCTT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGCTCACTGCAAGCTCTaGCTCCCAGTTTCACGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSAHCKL*LPVSRH Trigger: ATGGCGTGAAACTGGGAGGCAGAGCTTGCAGTGAGC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTACCATAGCCAGCGGTaGCCAGAGCACCAGTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSYHSQR*PEHQCY Trigger: GTAACACTGGTGCTCTGGCCACCGCTGGCTATGGTA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040663.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGAATGCCATGGTGCTTaGCGACAATGGCCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSECHGA*RQWPAG Trigger: ACCAGCTGGCCATTGTCGCCAAGCACCATGGCATTC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTACATCGGTCAGCTCCTaGCCCGGTCGCTCTTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSTSVSS*PGRSSI Trigger: TATTGAAGAGCGACCGGGCCAGGAGCTGACCGATGT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTGGAAGAGATGGTGGTaGTTAGGGCTGTCCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSWKRWW*LGLSGA Trigger: AGCTCCGGACAGCCCTAACCACCACCATCTCTTCCA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCATCCCTGGAAGAGATaGTGGTGGTTAGGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSHPWKR*WWLGLS Trigger: GGACAGCCCTAACCACCACCATCTCTTCCAGGGATG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGTGTGGTCAGGGGCTaGACGGTCAGCTTTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSSVVRG*TVSFWV Trigger: TACCCAAAAGCTGACCGTCCAGCCCCTGACCACACT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCTGGTCTCAAACACCTaGGCTCAAGGGATCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSLVSNT*AQGILP Trigger: TGGGAGGATCCCTTGAGCCCAGGTGTTTGAGACCAG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCAAGGCACAGAGAGGTaGAGTGACTTGCCCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSQGTER*SDLPKI Trigger: GATCTTGGGCAAGTCACTTCACCTCTCTGTGCCTTG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGGCACAGGTTTCAGTaGGCTGAGATCTCGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSRHRFQ*AEISPL Trigger: TAGAGGCGAGATCTCAGCTCACTGAAACCTGTGCCT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCACGTAGAAGGGAATaGCATGGTGCTTGGCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPRRRE*HGAWRQ Trigger: TTGTCGCCAAGCACCATGGCATTCCCTTCTACGTGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTCCAATCCCAGGTGCTaGAATCCGGACCCCATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSSNPRC*NPDPIN Trigger: GTTAATGGGGTCCGGATTGCAGCACCTGGGATTGGA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAACTCCAATCCCAGGTaGTGCAATCCGGACCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSNSNPR*CNPDPI Trigger: AATGGGGTCCGGATTGCAGCACCTGGGATTGGAGTT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTCCCTCTGCCTGGTATaGTCTTCCCAATGCTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSSLCLV*SSQCSH Trigger: ATGCGAGCATTGGGAAGAGCATACCAGGCAGAGGGA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGTGGCAGTTCCCTCTaGCTGGTATGCTCTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSSGSSL*LVCSSQ Trigger: TTGGGAAGAGCATACCAGGCAGAGGGAACTGCCACT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319545.12 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGCACCAGTGTTACAGTaGGTCAGCACAGTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSAPVLQ*VSTVTL Trigger: CAAGGTGACTGTGCTGACCCACTGTAACACTGGTGC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040663.8 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGCAGTTCCCTCTGCCTaGTATGCTCTTCCCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSAVPSA*YALPNA Trigger: AGCATTGGGAAGAGCATACCAGGCAGAGGGAACTGC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTGCTTCGGTTGTCTCTaGGGTCTTTCTCCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSCFGCL*GLSPAC Trigger: ACATGCTGGAGAAAGACCTCAGAGACAACCGAAGCA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000040663.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTATGGTCTCAATCTCCTaGTCTTGTGATCCACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSMVSIS*SCDPPA Trigger: GGCAGGTGGATCACAAGATCAGGAGATTGAGACCAT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGCAATCAAAGCACACTaGATCCTTGAACTCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSAIKAH*ILELLG Trigger: GCCCAGGAGTTCAAGGATGCAGTGTGCTTTGATTGC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCTAGGGTTCCATCCCTaGAAGAGATGGTGGTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSLGFHP*KRWWWL Trigger: TAACCACCACCATCTCTTCCAGGGATGGAACCCTAG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCCCAAGATCATACAGTaGGAAAAGTGGCGGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSPKIIQ*EKWRSQ Trigger: CTGACTCCGCCACTTTTCCCACTGTATGATCTTGGG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| 3UTR CAA 72 bp | AAGATCATACAGTGGGAAAAGTGGCGGAGTCAGGATTaGAATCTGGGCAGCCTGGCTCTAGGTGCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KIIQWEKWRSQD*NLGSLALGAGL Trigger: GAGCCCAGCACCTAGAGCCAGGCTGCCCAGATTCAAATCCTGACTCCGCCACTTTTCCCACTGTATGATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCACAGAGAGGTGAAGTaGCTTGCCCAAGATCATACA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSHREVK*LAQDHT Trigger: TGTATGATCTTGGGCAAGTCACTTCACCTCTCTGTG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGAGGTGAAGTGACTTaGCCAAGATCATACAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSRGEVT*PRSYSG Trigger: CCCACTGTATGATCTTGGGCAAGTCACTTCACCTCT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGTATGCTCTTCCCAATaGTCGCATAGCTCCGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSVCSSQ*SHSSVS Trigger: TGAAACGGAGCTATGCGAGCATTGGGAAGAGCATAC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCTTAAAATTCTGCCCTaGAGATGTCACCCTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSLKILP*RCHPSS Trigger: GGAGCTAGGGTGACATCTCCAGGGCAGAATTTTAAG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCTATGTTACCCAAACTaGTCTCAAACACCTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSLCYPN*SQTPGL Trigger: GAGCCCAGGTGTTTGAGACCAGTTTGGGTAACATAG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR TCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGCCTGGCCAACATGGTaGAATCATGTCTCTACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSAWPTW*NHVSTK Trigger: TTTAGTAGAGACATGATTTCACCATGTTGGCCAGGC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGTCCTCTTAAAATTCTaGCCTGGAGATGTCACCCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSVLLKF*PGDVTL Trigger: TAGGGTGACATCTCCAGGGCAGAATTTTAAGAGGAC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTTGCTTAGGGTGAAGTaGAGTAGTGCAATCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSLLRVK*SSAIKA Trigger: TGCTTTGATTGCACTACTGCACTTCACCCTAAGCAA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTATACAGTGGGAAAAGTaGCGGAGTCAGGATTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSIQWEK*RSQDLN Trigger: ATTCAAATCCTGACTCCGCCACTTTTCCCACTGTAT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGCCTGGCCTCATCATaGATTTTTGCATTAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSRWKALSELPALGTSSLASS*IFALIL Trigger: CAAAATTAATGCAAAAATCCATGATGAGGCCAGGCT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS GCA 90 bp | ACGAAGGCCACGAGCGCGGCGAGTCCCGGTCCCCCGGCGCCCGCCTaGAGCTCCACGGCGAGGCTGAGACAGCCCACCAGGGCTATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TKATSAASPGPPAPA*SSTARLRQPTRAMA Trigger: GGCCATAGCCCTGGTGGGCTGTCTCAGCCTCGCCGTGGAGCTGCAGGCGGGCGCCGGGGGACCGGGACTCGCCGCGCTCGTGGCCTTCGT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000040663.8 ENST00000319545.12 ENST00000588526.5 ENST00000589290.1 ENST00000591688.5 ENST00000593245.5 |
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| CDS GCA 90 bp | CCGGACCGCCTCTTCCGTAGCGCCCTCCCGTTCGGCCTCCCGGGCTaGAACATCAGCCAGGTCGCGGGCGGCGCGGGCCATGTTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: PDRLFRSALPFGLPG*NISQVAGGAGHVDS Trigger: GCTGTCAACATGGCCCGCGCCGCCCGCGACCTGGCTGATGTTGCAGCCCGGGAGGCCGAACGGGAGGGCGCTACGGAAGAGGCGGTCCGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000040663.8 ENST00000319545.12 ENST00000588526.5 ENST00000589290.1 ENST00000591688.5 ENST00000593245.5 |
||
| CDS GCA 90 bp | GGCCGGGTCTCTGTGCAGAAGGCATGCTCCAGGCGGCCCAGGCTGTaGAGTGAGCGAATCACACCTGCGGGGGCCCCACCCACCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRVSVQKACSRRPRL*SERITPAGAPPTRR Trigger: TCTCCTGGTGGGTGGGGCCCCCGCAGGTGTGATTCGCTCACTGCACAGCCTGGGCCGCCTGGAGCATGCCTTCTGCACAGAGACCCGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588526.5 |
||
| CDS GCA 90 bp | TCTGCAGGGAGCCCCGCGAGTAGCGGATCGCCTCCAGGGTCATGGTaGAGCAGCCAAGCCCAGCGCAACTCAGAGGGAGCTAGGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SAGSPASSGSPPGSW*SSQAQRNSEGARGP Trigger: CGGACCCCTAGCTCCCTCTGAGTTGCGCTGGGCTTGGCTGCTGCACCATGACCCTGGAGGCGATCCGCTACTCGCGGGGCTCCCTGCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000319545.12 ENST00000588526.5 |
||
| CDS GCA 90 bp | CGGTGGCCAGAGCACCAGTGTTACAGTGGGTCAGCACAGTCACCTTaGCACCGCTGGGGGCCACCCGCTCCAGGAGGTGGCGGGCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: RWPEHQCYSGSAQSP*HRWGPPAPGGGGLL Trigger: TAGGAGCCCGCCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGGTGACTGTGCTGACCCACTGTAACACTGGTGCTCTGGCCACCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000591688.5 ENST00000593245.5 |
||
| CDS GCA 90 bp | CAAAGGCCGTCAGCCGGGCTCCCTGGTTGTAGGGCCGGGTCTCTGTaGAGAAGGCATGCTCCAGGCGGCCCAGGCTGTGCAGTGAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QRPSAGLPGCRAGSL*RRHAPGGPGCAVSE Trigger: TTCGCTCACTGCACAGCCTGGGCCGCCTGGAGCATGCCTTCTGCACAGAGACCCGGCCCTACAACCAGGGAGCCCGGCTGACGGCCTTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000588526.5 ENST00000591688.5 |
||
| CDS CCA 90 bp | GGATCTGCAGGGAGCCCCGCGAGTAGCGGATCGCCTCCAGGGTCATaGTGCAGCAGCCAAGCCCAGCGCAACTCAGAGGGAGCTAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSAGSPASSGSPPGS*CSSQAQRNSEGARG Trigger: ACCCCTAGCTCCCTCTGAGTTGCGCTGGGCTTGGCTGCTGCACCATGACCCTGGAGGCGATCCGCTACTCGCGGGGCTCCCTGCAGATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000319545.12 ENST00000588526.5 |
||
| CDS CCA 90 bp | GAGCACCAGTGTTACAGTGGGTCAGCACAGTCACCTTGCCACCGCTaGGGGCCACCCGCTCCAGGAGGTGGCGGGCTCCTAGGTCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: EHQCYSGSAQSPCHR*GPPAPGGGGLLGPQ Trigger: TTGGGGACCTAGGAGCCCGCCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGGTGACTGTGCTGACCCACTGTAACACTGGTGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000591688.5 ENST00000593245.5 |
||
| CDS CCA 90 bp | AGCACAGTCACCTTGCCACCGCTGGGGGCCACCCGCTCCAGGAGGTaGCGGGCTCCTAGGTCCCCAATGCTTCGGTTGTCTCTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: STVTLPPLGATRSRR*RAPRSPMLRLSLRS Trigger: AGACCTCAGAGACAACCGAAGCATTGGGGACCTAGGAGCCCGCCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGGTGACTGTGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000591688.5 ENST00000593245.5 |
||
| CDS CCA 90 bp | CAATGGCCAGCTGGTAGGTGCCCACCTTGTTGGCTGTGTCGCCGTTaGCAACCACGCGGTCAGCTCCCACGACCACAGCTGACACGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QWPAGRCPPCWLCRR*QPRGQLPRPQLTRP Trigger: GGGGCGTGTCAGCTGTGGTCGTGGGAGCTGACCGCGTGGTTGCCAACGGCGACACAGCCAACAAGGTGGGCACCTACCAGCTGGCCATTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS CCA 90 bp | CCGTTTCACGTCTTGCCACCGCTGGGGGCCACCCGCTCCAGGAGGTaGCGGGCTCCTAGGTCCCCAATGCTTCGGTTGTCTCTGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFHVLPPLGATRSRR*RAPRSPMLRLSLRS Trigger: AGACCTCAGAGACAACCGAAGCATTGGGGACCTAGGAGCCCGCCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGACGTGAAACGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588526.5 |
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| CDS GCA 90 bp | GTCCCGCCCAGGGGCCCTCGCAGTGGCAGTTCCCTCTGCCTGGTATaGTCTTCCCAATGCTCGCATAGCTCCGTTTCACGTCTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VPPRGPRSGSSLCLV*SSQCSHSSVSRLSR Trigger: CCGGGAGAGACGTGAAACGGAGCTATGCGAGCATTGGGAAGAGCATACCAGGCAGAGGGAACTGCCACTGCGAGGGCCCCTGGGCGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000319545.12 ENST00000589290.1 |
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| CDS GCA 90 bp | GTGGTCCATTGGTTAGGGGTGCAGGCTCCTAGTCTGGGCGTGGATTaGCAAAGGCTTACCGAGCACAGTCCCGCCCAGGGGCCCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VVHWLGVQAPSLGVD*QRLTEHSPAQGPSQ Trigger: CTGCGAGGGCCCCTGGGCGGGACTGTGCTCGGTAAGCCTTTGGCAATCCACGCCCAGACTAGGAGCCTGCACCCCTAACCAATGGACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000588526.5 ENST00000589290.1 ENST00000593245.5 |
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| CDS GCA 90 bp | GTCCCGCCCAGGGGCCCTCGCAGTGGCAGTTCCCTCTGCCTGGTATaGTCTTCCCAATGCTCGCATAGCTCCGTTTCACGTCTTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VPPRGPRSGSSLCLV*SSQCSHSSVSRLAT Trigger: GGTGGCAAGACGTGAAACGGAGCTATGCGAGCATTGGGAAGAGCATACCAGGCAGAGGGAACTGCCACTGCGAGGGCCCCTGGGCGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588526.5 |
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| CDS GCA 90 bp | GTCCCGCCCAGGGGCCCTCGCAGTGGCAGTTCCCTCTGCCTGGTATaGTCTTCCCAATGCTCGCATAGCTCCGTTTCACGTCTAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPPRGPRSGSSLCLV*SSQCSHSSVSRLGL Trigger: CAGCCCTAGACGTGAAACGGAGCTATGCGAGCATTGGGAAGAGCATACCAGGCAGAGGGAACTGCCACTGCGAGGGCCCCTGGGCGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593245.5 |
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| CDS CCA 90 bp | CATGGTGCTTGGCGACAATGGCCAGCTGGTAGGTGCCCACCTTGTTaGCTGTGTCGCCGTTGGCAACCACGCGGTCAGCTCCCACGACCA | + |
|
Preference number: 5 (lower is better) Translates to: HGAWRQWPAGRCPPC*LCRRWQPRGQLPRP Trigger: TGGTCGTGGGAGCTGACCGCGTGGTTGCCAACGGCGACACAGCCAACAAGGTGGGCACCTACCAGCTGGCCATTGTCGCCAAGCACCATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS CCA 90 bp | TGGGGGCAGCCACGTAGAAGGGAATGCCATGGTGCTTGGCGACAATaGCCAGCTGGTAGGTGCCCACCTTGTTGGCTGTGTCGCCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WGQPRRRECHGAWRQ*PAGRCPPCWLCRRW Trigger: CCAACGGCGACACAGCCAACAAGGTGGGCACCTACCAGCTGGCCATTGTCGCCAAGCACCATGGCATTCCCTTCTACGTGGCTGCCCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGTCAGCACAGTCACCTaGCCACCGCTGGGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRWKALSELPALGTSVSTVT*PPLGAT Trigger: GGTGGCCCCCAGCGGTGGCAAGGTGACTGTGCTGAC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000040663.8 |
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| CDS GCA 90 bp | AGAAGGGAATGCCATGGTGCTTGGCGACAATGGCCAGCTGGTAGGTaGCCACCTTGTTGGCTGTGTCGCCGTTGGCAACCACGCGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRECHGAWRQWPAGR*PPCWLCRRWQPRGQ Trigger: CTGACCGCGTGGTTGCCAACGGCGACACAGCCAACAAGGTGGGCACCTACCAGCTGGCCATTGTCGCCAAGCACCATGGCATTCCCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTACGAGGAAGCTCAGCTaGTCGCGCACGAAGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRWKALSELPALGTSTRKLS*SRTKAT Trigger: CGTGGCCTTCGTGCGCGACAAGCTGAGCTTCCTCGT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTTGGCTGTGTCGCCGTaGGCAACCACGCGGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRWKALSELPALGTSLAVSP*ATTRSA Trigger: AGCTGACCGCGTGGTTGCCAACGGCGACACAGCCAA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS TCA 90 bp | CCAGGAGGTGGCGGGCTCCTAGGTCCCCAATGCTTCGGTTGTCTCTaGGGTCTTTCTCCAGCATGTCCTCGGTGCAGCAGATCACTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGGGGLLGPQCFGCL*GLSPACPRCSRSLS Trigger: AGAGAGTGATCTGCTGCACCGAGGACATGCTGGAGAAAGACCTCAGAGACAACCGAAGCATTGGGGACCTAGGAGCCCGCCACCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000040663.8 ENST00000588526.5 ENST00000591688.5 ENST00000593245.5 |
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| CDS CCA 90 bp | ATGAAGAGCTGGGGGCAGCCACGTAGAAGGGAATGCCATGGTGCTTaGCGACAATGGCCAGCTGGTAGGTGCCCACCTTGTTGGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: MKSWGQPRRRECHGA*RQWPAGRCPPCWLC Trigger: ACACAGCCAACAAGGTGGGCACCTACCAGCTGGCCATTGTCGCCAAGCACCATGGCATTCCCTTCTACGTGGCTGCCCCCAGCTCTTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTGGAATGCCATGGTGCTaGGCGACAATGGCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRWKALSELPALGTSGMPWC*ATMASW Trigger: CCAGCTGGCCATTGTCGCCAAGCACCATGGCATTCC...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGGCAGGAGAGTCGCTaGAACCCAGAAGGCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRWKALSELPALGTSRQESR*NPEGGG Trigger: ACCTCCGCCTTCTGGGTTCAAGCGACTCTCCTGCCT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS CCA 90 bp | TGTGCAGTGAGCGAATCACACCTAGGGCTGTACCATAGCCAGCGGTaGCCAGAGCACCAGTGTTACAGTGGGTCAGCACAGTCACCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CAVSESHLGLYHSQR*PEHQCYSGSAQSPC Trigger: GCAAGGTGACTGTGCTGACCCACTGTAACACTGGTGCTCTGGCCACCGCTGGCTATGGTACAGCCCTAGGTGTGATTCGCTCACTGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000591688.5 |
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| CDS CCA 90 bp | TCGCATAGCTCCGTTTCACGTCTAGGGCTGTACCATAGCCAGCGGTaGCCAGAGCACCAGTGTTACAGTGGGTCAGCACAGTCACCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHSSVSRLGLYHSQR*PEHQCYSGSAQSPC Trigger: GCAAGGTGACTGTGCTGACCCACTGTAACACTGGTGCTCTGGCCACCGCTGGCTATGGTACAGCCCTAGACGTGAAACGGAGCTATGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593245.5 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTGGCGGAGTCAGGATTaGAATCTGGGCAGCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRWKALSELPALGTSWRSQD*NLGSLA Trigger: AGCCAGGCTGCCCAGATTCAAATCCTGACTCCGCCA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS CCA 90 bp | ATCCCAGGTGCTGCAATCCGGACCCCATTAACATCGGTCAGCTCCTaGCCCGGTCGCTCTTCAATAATGATCTCCTTGCCGGTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IPGAAIRTPLTSVSS*PGRSSIMISLPVSR Trigger: TCTGGAGACCGGCAAGGAGATCATTATTGAAGAGCGACCGGGCCAGGAGCTGACCGATGTTAATGGGGTCCGGATTGCAGCACCTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTAGGCAGGGGGATCATTaGAGTCAGGAGTTCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRWKALSELPALGTSRQGDH*SQEFET Trigger: GGTCTCGAACTCCTGACTCAAATGATCCCCCTGCCT...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTCCCCAATGCTTCGGTaGTCTCTGAGGTCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRWKALSELPALGTSSPMLR*SLRSFS Trigger: GGAGAAAGACCTCAGAGACAACCGAAGCATTGGGGA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000040663.8 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTTCAATAATGATCTCCTaGCCGGTCTCCAGACGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRWKALSELPALGTSSIMIS*PVSRRR Trigger: CCTCCGTCTGGAGACCGGCAAGGAGATCATTATTGA...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCTCTAGATGGAAGGCCCTGTCTGAGCTCCCTGCACTAGGAACAAGTCTAGGGAGAGCTGAGTaGGTTACATCTGGGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLGSRWKALSELPALGTSLGRAE*VTSGVH Trigger: ATGGACCCCAGATGTAACCAACTCAGCTCTCCCTAG...ACTTGTTCCTAGTGCAGGGAGCTCAGACAGGGCCTTCCATCTAGAGCCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS TCA 72 bp | GTCCCCCGGCGCCCGCCTGCAGCTCCACGGCGAGGCTaGGACAGCCCACCAGGGCTATGGCCGGGGCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VPRRPPAAPRRG*DSPPGLWPGRP Trigger: GGGGCGCCCCGGCCATAGCCCTGGTGGGCTGTCTCAGCCTCGCCGTGGAGCTGCAGGCGGGCGCCGGGGGAC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000040663.8 ENST00000319545.12 ENST00000588526.5 ENST00000589290.1 ENST00000591688.5 ENST00000593245.5 |
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| CDS GCA 72 bp | ACGAGCGCGGCGAGTCCCGGTCCCCCGGCGCCCGCCTaGAGCTCCACGGCGAGGCTGAGACAGCCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSAASPGPPAPA*SSTARLRQPTR Trigger: CCTGGTGGGCTGTCTCAGCCTCGCCGTGGAGCTGCAGGCGGGCGCCGGGGGACCGGGACTCGCCGCGCTCGT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000040663.8 ENST00000319545.12 ENST00000588526.5 ENST00000589290.1 ENST00000591688.5 ENST00000593245.5 |
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| CDS CAA 90 bp | GCCATGTTGACAGCGGTGGGCCGGGCGGTGACGAGGAAGCTCAGCTaGTCGCGCACGAAGGCCACGAGCGCGGCGAGTCCCGGTCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AMLTAVGRAVTRKLS*SRTKATSAASPGPP Trigger: CGGGGGACCGGGACTCGCCGCGCTCGTGGCCTTCGTGCGCGACAAGCTGAGCTTCCTCGTCACCGCCCGGCCCACCGCTGTCAACATGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000040663.8 ENST00000319545.12 ENST00000588526.5 ENST00000589290.1 ENST00000591688.5 ENST00000593245.5 |
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| CDS CAA 72 bp | ACAGCGGTGGGCCGGGCGGTGACGAGGAAGCTCAGCTaGTCGCGCACGAAGGCCACGAGCGCGGCGAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TAVGRAVTRKLS*SRTKATSAASP Trigger: GGGACTCGCCGCGCTCGTGGCCTTCGTGCGCGACAAGCTGAGCTTCCTCGTCACCGCCCGGCCCACCGCTGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000040663.8 ENST00000319545.12 ENST00000588526.5 ENST00000589290.1 ENST00000591688.5 ENST00000593245.5 |
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| CDS CAA 90 bp | GCGGTGGCCAGAGCACCAGTGTTACAGTGGGTCAGCACAGTCACCTaGCCACCGCTGGGGGCCACCCGCTCCAGGAGGTGGCGGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AVARAPVLQWVSTVT*PPLGATRSRRWRAP Trigger: AGGAGCCCGCCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGGTGACTGTGCTGACCCACTGTAACACTGGTGCTCTGGCCACCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000591688.5 ENST00000593245.5 |
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| CDS TCA 72 bp | GCAGAAGGCATGCTCCAGGCGGCCCAGGCTGTGCAGTaGGCGAATCACACCTGCGGGGGCCCCACCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: AEGMLQAAQAVQ*ANHTCGGPTHQ Trigger: CTGGTGGGTGGGGCCCCCGCAGGTGTGATTCGCTCACTGCACAGCCTGGGCCGCCTGGAGCATGCCTTCTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588526.5 |
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| CDS GCA 72 bp | TCAGCCGGGCTCCCTGGTTGTAGGGCCGGGTCTCTGTaGAGAAGGCATGCTCCAGGCGGCCCAGGCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SAGLPGCRAGSL*RRHAPGGPGCA Trigger: TGCACAGCCTGGGCCGCCTGGAGCATGCCTTCTGCACAGAGACCCGGCCCTACAACCAGGGAGCCCGGCTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000588526.5 ENST00000591688.5 |
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| CDS CCA 72 bp | GGGAGCCCCGCGAGTAGCGGATCGCCTCCAGGGTCATaGTGCAGCAGCCAAGCCCAGCGCAACTCAGAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSPASSGSPPGS*CSSQAQRNSEG Trigger: TCCCTCTGAGTTGCGCTGGGCTTGGCTGCTGCACCATGACCCTGGAGGCGATCCGCTACTCGCGGGGCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000040663.8 ENST00000319545.12 ENST00000588526.5 ENST00000591688.5 ENST00000593245.5 |
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| CDS CCA 72 bp | ACCTTGCCACCGCTGGGGGCCACCCGCTCCAGGAGGTaGCGGGCTCCTAGGTCCCCAATGCTTCGGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TLPPLGATRSRR*RAPRSPMLRLS Trigger: AGACAACCGAAGCATTGGGGACCTAGGAGCCCGCCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000591688.5 ENST00000593245.5 |
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| CDS CCA 72 bp | GTCTTGCCACCGCTGGGGGCCACCCGCTCCAGGAGGTaGCGGGCTCCTAGGTCCCCAATGCTTCGGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLPPLGATRSRR*RAPRSPMLRLS Trigger: AGACAACCGAAGCATTGGGGACCTAGGAGCCCGCCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588526.5 |
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| CDS GCA 72 bp | AGCCCCGCGAGTAGCGGATCGCCTCCAGGGTCATGGTaGAGCAGCCAAGCCCAGCGCAACTCAGAGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPASSGSPPGSW*SSQAQRNSEGA Trigger: AGCTCCCTCTGAGTTGCGCTGGGCTTGGCTGCTGCACCATGACCCTGGAGGCGATCCGCTACTCGCGGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000040663.8 ENST00000319545.12 ENST00000588526.5 ENST00000591688.5 ENST00000593245.5 |
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| CDS GCA 72 bp | GAGCACCAGTGTTACAGTGGGTCAGCACAGTCACCTTaGCACCGCTGGGGGCCACCCGCTCCAGGAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EHQCYSGSAQSP*HRWGPPAPGGG Trigger: GCCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGGTGACTGTGCTGACCCACTGTAACACTGGTGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000591688.5 ENST00000593245.5 |
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| CDS CAA 90 bp | GCCTGGTATGCTCTTCCCAATGCTCGCATAGCTCCGTTTCACGTCTaGCCACCGCTGGGGGCCACCCGCTCCAGGAGGTGGCGGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AWYALPNARIAPFHV*PPLGATRSRRWRAP Trigger: AGGAGCCCGCCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGACGTGAAACGGAGCTATGCGAGCATTGGGAAGAGCATACCAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588526.5 |
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| CDS CCA 72 bp | GCTGGTAGGTGCCCACCTTGTTGGCTGTGTCGCCGTTaGCAACCACGCGGTCAGCTCCCACGACCACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGRCPPCWLCRR*QPRGQLPRPQL Trigger: CAGCTGTGGTCGTGGGAGCTGACCGCGTGGTTGCCAACGGCGACACAGCCAACAAGGTGGGCACCTACCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS CAA 72 bp | AGAGCACCAGTGTTACAGTGGGTCAGCACAGTCACCTaGCCACCGCTGGGGGCCACCCGCTCCAGGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RAPVLQWVSTVT*PPLGATRSRRW Trigger: CCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGGTGACTGTGCTGACCCACTGTAACACTGGTGCTCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000040663.8 ENST00000591688.5 ENST00000593245.5 |
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| CDS CAA 72 bp | GCTCTTCCCAATGCTCGCATAGCTCCGTTTCACGTCTaGCCACCGCTGGGGGCCACCCGCTCCAGGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ALPNARIAPFHV*PPLGATRSRRW Trigger: CCACCTCCTGGAGCGGGTGGCCCCCAGCGGTGGCAAGACGTGAAACGGAGCTATGCGAGCATTGGGAAGAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588526.5 |
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| CDS GCA 72 bp | TGGTTAGGGGTGCAGGCTCCTAGTCTGGGCGTGGATTaGCAAAGGCTTACCGAGCACAGTCCCGCCCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WLGVQAPSLGVD*QRLTEHSPAQG Trigger: CCCCTGGGCGGGACTGTGCTCGGTAAGCCTTTGGCAATCCACGCCCAGACTAGGAGCCTGCACCCCTAACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000588526.5 ENST00000589290.1 ENST00000593245.5 |
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| CDS CCA 72 bp | TGGCGACAATGGCCAGCTGGTAGGTGCCCACCTTGTTaGCTGTGTCGCCGTTGGCAACCACGCGGTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WRQWPAGRCPPC*LCRRWQPRGQL Trigger: GAGCTGACCGCGTGGTTGCCAACGGCGACACAGCCAACAAGGTGGGCACCTACCAGCTGGCCATTGTCGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS CAA 90 bp | ACCCGCTCCAGGAGGTGGCGGGCTCCTAGGTCCCCAATGCTTCGGTaGTCTCTGAGGTCTTTCTCCAGCATGTCCTCGGTGCAGCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: TRSRRWRAPRSPMLR*SLRSFSSMSSVQQI Trigger: GATCTGCTGCACCGAGGACATGCTGGAGAAAGACCTCAGAGACAACCGAAGCATTGGGGACCTAGGAGCCCGCCACCTCCTGGAGCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000040663.8 ENST00000588526.5 ENST00000591688.5 ENST00000593245.5 |
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| CDS GCA 72 bp | TGCCATGGTGCTTGGCGACAATGGCCAGCTGGTAGGTaGCCACCTTGTTGGCTGTGTCGCCGTTGGCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: CHGAWRQWPAGR*PPCWLCRRWQP Trigger: TGGTTGCCAACGGCGACACAGCCAACAAGGTGGGCACCTACCAGCTGGCCATTGTCGCCAAGCACCATGGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS CCA 72 bp | TGGGGGCAGCCACGTAGAAGGGAATGCCATGGTGCTTaGCGACAATGGCCAGCTGGTAGGTGCCCACCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: WGQPRRRECHGA*RQWPAGRCPPC Trigger: ACAAGGTGGGCACCTACCAGCTGGCCATTGTCGCCAAGCACCATGGCATTCCCTTCTACGTGGCTGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS CCA 72 bp | CCTTGCCGGTCTCCAGACGGAGGTCACATGAAGAGCTaGGGGCAGCCACGTAGAAGGGAATGCCATGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: PCRSPDGGHMKS*GQPRRRECHGA Trigger: AGCACCATGGCATTCCCTTCTACGTGGCTGCCCCCAGCTCTTCATGTGACCTCCGTCTGGAGACCGGCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
||
| CDS CCA 72 bp | GGGGTCCATCTAGGGTTCCATCCCTGGAAGAGATGGTaGTGGTTAGGGCTGTCCGGAGCTCCTCAGGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GVHLGFHPWKRW*WLGLSGAPQGQ Trigger: TTGCCCCTGAGGAGCTCCGGACAGCCCTAACCACCACCATCTCTTCCAGGGATGGAACCCTAGATGGACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS CCA 72 bp | CCAGGGCTTACCGTCTGCTTACCTGACACGCCCCTATaGGCCATGGCAGCAGCCACCATGCTGTCGGTGATA | + |
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Preference number: 6 (lower is better) Translates to: PGLTVCLPDTPL*AMAAATMLSVI Trigger: TATCACCGACAGCATGGTGGCTGCTGCCATGGCCCATAGGGGCGTGTCAGGTAAGCAGACGGTAAGCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591688.5 |
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| CDS TCA 72 bp | GGCGGGCTCCTAGGTCCCCAATGCTTCGGTTGTCTCTaGGGTCTTTCTCCAGCATGTCCTCGGTGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GGLLGPQCFGCL*GLSPACPRCSR Trigger: TCTGCTGCACCGAGGACATGCTGGAGAAAGACCTCAGAGACAACCGAAGCATTGGGGACCTAGGAGCCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000040663.8 ENST00000588526.5 ENST00000591688.5 ENST00000593245.5 |
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| CDS GCA 72 bp | CACATGAAGAGCTGGGGGCAGCCACGTAGAAGGGAATaGCATGGTGCTTGGCGACAATGGCCAGCTGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: HMKSWGQPRRRE*HGAWRQWPAGR Trigger: CCTACCAGCTGGCCATTGTCGCCAAGCACCATGGCATTCCCTTCTACGTGGCTGCCCCCAGCTCTTCATGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS CAA 72 bp | AGGAGGTGGCGGGCTCCTAGGTCCCCAATGCTTCGGTaGTCTCTGAGGTCTTTCTCCAGCATGTCCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: RRWRAPRSPMLR*SLRSFSSMSSV Trigger: CACCGAGGACATGCTGGAGAAAGACCTCAGAGACAACCGAAGCATTGGGGACCTAGGAGCCCGCCACCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000040663.8 ENST00000588526.5 ENST00000591688.5 ENST00000593245.5 |
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| CDS CCA 72 bp | AGCGAATCACACCTAGGGCTGTACCATAGCCAGCGGTaGCCAGAGCACCAGTGTTACAGTGGGTCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SESHLGLYHSQR*PEHQCYSGSAQ Trigger: CTGTGCTGACCCACTGTAACACTGGTGCTCTGGCCACCGCTGGCTATGGTACAGCCCTAGGTGTGATTCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000591688.5 |
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| CDS CCA 72 bp | CCACGTAGAAGGGAATGCCATGGTGCTTGGCGACAATaGCCAGCTGGTAGGTGCCCACCTTGTTGGCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: PRRRECHGAWRQ*PAGRCPPCWLC Trigger: ACACAGCCAACAAGGTGGGCACCTACCAGCTGGCCATTGTCGCCAAGCACCATGGCATTCCCTTCTACGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS CCA 72 bp | TCCGTTTCACGTCTAGGGCTGTACCATAGCCAGCGGTaGCCAGAGCACCAGTGTTACAGTGGGTCAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: SVSRLGLYHSQR*PEHQCYSGSAQ Trigger: CTGTGCTGACCCACTGTAACACTGGTGCTCTGGCCACCGCTGGCTATGGTACAGCCCTAGACGTGAAACGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593245.5 |
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| CDS CCA 72 bp | GCTGCAATCCGGACCCCATTAACATCGGTCAGCTCCTaGCCCGGTCGCTCTTCAATAATGATCTCCTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: AAIRTPLTSVSS*PGRSSIMISLP Trigger: CGGCAAGGAGATCATTATTGAAGAGCGACCGGGCCAGGAGCTGACCGATGTTAATGGGGTCCGGATTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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| CDS CAA 72 bp | AGCTCCTGGCCCGGTCGCTCTTCAATAATGATCTCCTaGCCGGTCTCCAGACGGAGGTCACATGAAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSWPGRSSIMIS*PVSRRRSHEEL Trigger: CAGCTCTTCATGTGACCTCCGTCTGGAGACCGGCAAGGAGATCATTATTGAAGAGCGACCGGGCCAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000040663.8 ENST00000319545.12 |
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