RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRGPRE (Homo sapiens)

Ensembl gene IDs: ENSG00000184350

Ensembl transcript IDs: ENST00000389832.7

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGATACCTGGACCCAGGCCTGCTGGGCACGTGCGGGAGCCTGAGGTaGACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTC +
Preference number: 1 (lower is better)
Translates to: GYLDPGLLGTCGSLR*THCVGWEGPGAAGF
Trigger: GAATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTCCCGCACGTGCCCAGCAGGCCTGGGTCCAGGTATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 90 bp TCAAGGGATACCTGGACCCAGGCCTGCTGGGCACGTGCGGGAGCCTaGGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCG +
Preference number: 1 (lower is better)
Translates to: SRDTWTQACWARAGA*GERTVWAGRGPVQP
Trigger: CGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTCCCGCACGTGCCCAGCAGGCCTGGGTCCAGGTATCCCTTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp CCAAGTGGGGGCTGGAGGTGCTCTAGGAGAGGTGGGTCCAGCCCCTaGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTGCTGGG +
Preference number: 1 (lower is better)
Translates to: PSGGWRCSRRGGSSP*GSQSQGIPGPRPAG
Trigger: CCCAGCAGGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCTCTCCTAGAGCACCTCCAGCCCCCACTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp GGCTGGGCACTGACCGAGGAGCTTTGCCTGCGACCCAGGTGGAGGTaGCCTTTGAGCAGTGAGGCCCCAGGGTCCTGCAGGGTGGGGTCT +
Preference number: 1 (lower is better)
Translates to: GWALTEELCLRPRWR*PLSSEAPGSCRVGS
Trigger: AGACCCCACCCTGCAGGACCCTGGGGCCTCACTGCTCAAAGGCCACCTCCACCTGGGTCGCAGGCAAAGCTCCTCGGTCAGTGCCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR GCA 90 bp GAAGCTGGAGTGGGAGGGGAGGTGGCCTGCGGAAAGGCCTGGACCTaGCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGT +
Preference number: 1 (lower is better)
Translates to: EAGVGGEVACGKAWT*PSPGVWPCFLAFRG
Trigger: ACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGCCTTTCCGCAGGCCACCTCCCCTCCCACTCCAGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR GCA 90 bp CCAGGCTGTGGGCTCCAAAGCCCCCACTCTAGCACCCCTGGCACATaGTCCTGGATGGCAGCCAGGCCTGGCACTCAGCGGAAGCTCGGA +
Preference number: 1 (lower is better)
Translates to: PGCGLQSPHSSTPGT*SWMAARPGTQRKLG
Trigger: TCCGAGCTTCCGCTGAGTGCCAGGCCTGGCTGCCATCCAGGAGCATGTGCCAGGGGTGCTAGAGTGGGGGCTTTGGAGCCCACAGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp GACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTaGGGAGGGGATAGGGAAGCTGGCCGCAGGCCTGTCTCCGCTCCT +
Preference number: 1 (lower is better)
Translates to: DAMQRRLIYRLVPGR*GGDREAGRRPVSAP
Trigger: AGGAGCGGAGACAGGCCTGCGGCCAGCTTCCCTATCCCCTCCCCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp GAGGTGGCCTGCGGAAAGGCCTGGACCTGCCCCTCACCTGGCGTCTaGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCACTGCAGCTGAG +
Preference number: 1 (lower is better)
Translates to: EVACGKAWTCPSPGV*PCFLAFRGLLTAAE
Trigger: CTCAGCTGCAGTGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGCCTTTCCGCAGGCCACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp GGACACCTGAGCCAGCCCTGGTCCAGTGAGGCGGAGCGTGTGGCGTaGGAGGGTGGTGCTGGGAGTCACCTTCTGGCTTTGCAGCTTTCC +
Preference number: 1 (lower is better)
Translates to: GHLSQPWSSEAERVA*EGGAGSHLLALQLS
Trigger: GGAAAGCTGCAAAGCCAGAAGGTGACTCCCAGCACCACCCTCCCACGCCACACGCTCCGCCTCACTGGACCAGGGCTGGCTCAGGTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp ATTGAGGAAGCTGGAGTGGGAGGGGAGGTGGCCTGCGGAAAGGCCTaGACCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTC +
Preference number: 1 (lower is better)
Translates to: IEEAGVGGEVACGKA*TCPSPGVWPCFLAF
Trigger: GAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGCCTTTCCGCAGGCCACCTCCCCTCCCACTCCAGCTTCCTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp AGGCGGAGCGTGTGGCGTGGGAGGGTGGTGCTGGGAGTCACCTTCTaGCTTTGCAGCTTTCCTGTGGTCCTGAACGGCCACATAGCCCCT +
Preference number: 1 (lower is better)
Translates to: RRSVWRGRVVLGVTF*LCSFPVVLNGHIAP
Trigger: AGGGGCTATGTGGCCGTTCAGGACCACAGGAAAGCTGCAAAGCCAGAAGGTGACTCCCAGCACCACCCTCCCACGCCACACGCTCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp CTGAGGGCTCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTaGGGCCAAGGGGATACCCCACCAGCATCCTGGGCCATCAGGCCA +
Preference number: 1 (lower is better)
Translates to: LRAQGPQNWRPSWHI*GQGDTPPASWAIRP
Trigger: TGGCCTGATGGCCCAGGATGCTGGTGGGGTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGAGCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 90 bp TGCCTCCCAGGGGAGCCTCATGCTCCAGACCAAGGGTCACAACTTTaGCAGCACATGACCGGGTCACCCACCAAGGCCTCCTCCAGGTCC +
Preference number: 1 (lower is better)
Translates to: CLPGEPHAPDQGSQL*QHMTGSPTKASSRS
Trigger: GGACCTGGAGGAGGCCTTGGTGGGTGACCCGGTCATGTGCTGTCAAAGTTGTGACCCTTGGTCTGGAGCATGAGGCTCCCCTGGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 90 bp AGCCAGGCCTGGCACTCAGCGGAAGCTCGGAAACCTGTTGAGGGGTaGAGCCTGGGTTCCTTCCTCAGAGGGATCCTCTGGAGCGGGACT +
Preference number: 1 (lower is better)
Translates to: SQAWHSAEARKPVEG*SLGSFLRGILWSGT
Trigger: AGTCCCGCTCCAGAGGATCCCTCTGAGGAAGGAACCCAGGCTTCACCCCTCAACAGGTTTCCGAGCTTCCGCTGAGTGCCAGGCCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 90 bp GGATGGCAGCCAGGCCTGGCACTCAGCGGAAGCTCGGAAACCTGTTaGGGGGTGAAGCCTGGGTTCCTTCCTCAGAGGGATCCTCTGGAG +
Preference number: 1 (lower is better)
Translates to: GWQPGLALSGSSETC*GVKPGFLPQRDPLE
Trigger: CTCCAGAGGATCCCTCTGAGGAAGGAACCCAGGCTTCACCCCTCAACAGGTTTCCGAGCTTCCGCTGAGTGCCAGGCCTGGCTGCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp CTGGGCCCTGAGGACGGAGCGGGTTACACAGGCTCCCTGGAATGTTaGCTGCCCCCAGGAGTAGCCGCCTGTTCTTGGGAATTCTGTGCT +
Preference number: 1 (lower is better)
Translates to: LGPEDGAGYTGSLEC*LPPGVAACSWEFCA
Trigger: AGCACAGAATTCCCAAGAACAGGCGGCTACTCCTGGGGGCAGCCAACATTCCAGGGAGCCTGTGTAACCCGCTCCGTCCTCAGGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR GCA 90 bp GGGATCCTCTGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTaGCTTGGATGGGGCCGGTGTGAAGCTTTCTGGTTGCTGAAGACC +
Preference number: 1 (lower is better)
Translates to: GILWSGTCSGQRRVN*LGWGRCEAFWLLKT
Trigger: GGTCTTCAGCAACCAGAAAGCTTCACACCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp TGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATaGGGCCGGTGTGAAGCTTTCTGGTTGCTGAAGACCTGGGTCCTG +
Preference number: 1 (lower is better)
Translates to: WSGTCSGQRRVNCLG*GRCEAFWLLKTWVL
Trigger: CAGGACCCAGGTCTTCAGCAACCAGAAAGCTTCACACCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp CCTGGCACTCAGCGGAAGCTCGGAAACCTGTTGAGGGGTGAAGCCTaGGTTCCTTCCTCAGAGGGATCCTCTGGAGCGGGACTTGCTCAG +
Preference number: 1 (lower is better)
Translates to: PGTQRKLGNLLRGEA*VPSSEGSSGAGLAQ
Trigger: CTGAGCAAGTCCCGCTCCAGAGGATCCCTCTGAGGAAGGAACCCAGGCTTCACCCCTCAACAGGTTTCCGAGCTTCCGCTGAGTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR GCA 90 bp CAGCTGAGCAGGGAATGGGTAGCAGCAGCAGCTCTCGAGTGCCAGTaGGTGAACCGTTGGGGAGGTTTCCCAAAAATGCACGTTCCTCGG +
Preference number: 1 (lower is better)
Translates to: QLSREWVAAAALECQ*VNRWGGFPKMHVPR
Trigger: CCGAGGAACGTGCATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGGCACTCGAGAGCTGCTGCTGCTACCCATTCCCTGCTCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp GAATGGGTAGCAGCAGCAGCTCTCGAGTGCCAGTGCGTGAACCGTTaGGGAGGTTTCCCAAAAATGCACGTTCCTCGGCCTTCTCCCCAG +
Preference number: 1 (lower is better)
Translates to: EWVAAAALECQCVNR*GGFPKMHVPRPSPQ
Trigger: CTGGGGAGAAGGCCGAGGAACGTGCATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGGCACTCGAGAGCTGCTGCTGCTACCCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 90 bp CTAGAGTGGGGACGAGCTGGGCCCAGTTTCCATGGAGACCTCAGATaGGGCCACATTTCCCGGACTCCTCGAGAAGGGGCTAATAAGGAG +
Preference number: 1 (lower is better)
Translates to: LEWGRAGPSFHGDLR*GHISRTPREGANKE
Trigger: CTCCTTATTAGCCCCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTGGGCCCAGCTCGTCCCCACTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR GCA 90 bp TCACTGCAGCTGAGCAGGGAATGGGTAGCAGCAGCAGCTCTCGAGTaGCAGTGCGTGAACCGTTGGGGAGGTTTCCCAAAAATGCACGTT +
Preference number: 1 (lower is better)
Translates to: SLQLSREWVAAAALE*QCVNRWGGFPKMHV
Trigger: AACGTGCATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGGCACTCGAGAGCTGCTGCTGCTACCCATTCCCTGCTCAGCTGCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp CAGCTTTCCTGTGGTCCTGAACGGCCACATAGCCCCTCGGAGCCTTaGTGGCTCATCTGCAGAGTGGGAGCACCTTCCTACATTATTACG +
Preference number: 1 (lower is better)
Translates to: QLSCGPERPHSPSEP*WLICRVGAPSYIIT
Trigger: CGTAATAATGTAGGAAGGTGCTCCCACTCTGCAGATGAGCCACCAAGGCTCCGAGGGGCTATGTGGCCGTTCAGGACCACAGGAAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 90 bp GGGCTAATAAGGAGGAATCTAGAGCCACTCCAATCCCCTGGATGCTaGGAGCAGGCTCTCTGGGAAGAAGTGAGCATTCTAAGGGTCCGC +
Preference number: 1 (lower is better)
Translates to: GLIRRNLEPLQSPGC*EQALWEEVSILRVR
Trigger: GCGGACCCTTAGAATGCTCACTTCTTCCCAGAGAGCCTGCTCTCAGCATCCAGGGGATTGGAGTGGCTCTAGATTCCTCCTTATTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp TGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTaGGCTCACGAGAGGCTGGACAGGCCTCAAAGCACTGGGTTCTCA +
Preference number: 1 (lower is better)
Translates to: WMCGVGGSRIDRHFS*AHERLDRPQSTGFS
Trigger: TGAGAACCCAGTGCTTTGAGGCCTGTCCAGCCTCTCGTGAGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 90 bp TTACGAGGATTCCCCGGGAACACGTCCACGGTGAGGTCATGTCCGTaGGATGAATCTGTGCTTTTCCTCCTGGTTCTTCCTTGTTCTGGG +
Preference number: 1 (lower is better)
Translates to: LRGFPGNTSTVRSCP*DESVLFLLVLPCSG
Trigger: CCCAGAACAAGGAAGAACCAGGAGGAAAAGCACAGATTCATCTCACGGACATGACCTCACCGTGGACGTGTTCCCGGGGAATCCTCGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 90 bp ACCTTCCTACATTATTACGAGGATTCCCCGGGAACACGTCCACGGTaGGGTCATGTCCGTGAGATGAATCTGTGCTTTTCCTCCTGGTTC +
Preference number: 1 (lower is better)
Translates to: TFLHYYEDSPGTRPR*GHVREMNLCFSSWF
Trigger: GAACCAGGAGGAAAAGCACAGATTCATCTCACGGACATGACCTCACCGTGGACGTGTTCCCGGGGAATCCTCGTAATAATGTAGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp ACATTTCTCTTGGGCTCACGAGAGGCTGGACAGGCCTCAAAGCACTaGGTTCTCATATTTTACAGACCAGCAAACAGAGGCGTAGGGATG +
Preference number: 1 (lower is better)
Translates to: TFLLGSREAGQASKH*VLIFYRPANRGVGM
Trigger: CATCCCTACGCCTCTGTTTGCTGGTCTGTAAAATATGAGAACCCAGTGCTTTGAGGCCTGTCCAGCCTCTCGTGAGCCCAAGAGAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 90 bp CCTCCTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTaGAAGTGGAATTTGTGGACAGGCCACTTCCCTTTCTGTTCTTGT +
Preference number: 1 (lower is better)
Translates to: PPGSSLFWGKFMSWG*KWNLWTGHFPFCSC
Trigger: ACAAGAACAGAAAGGGAAGTGGCCTGTCCACAAATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp CCGGAGTCAGAAATCAAAGAAAACACTCTCAGATGCCTTGGTCTGTaGCTAAGAATTGCACTGTGGACTTGGATGTGTGGCGTTGGTGGC +
Preference number: 1 (lower is better)
Translates to: PESEIKENTLRCLGL*LRIALWTWMCGVGG
Trigger: GCCACCAACGCCACACATCCAAGTCCACAGTGCAATTCTTAGCCACAGACCAAGGCATCTGAGAGTGTTTTCTTTGATTTCTGACTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR GCA 90 bp CAGCCATGGAGGCCGGAGTCAGAAATCAAAGAAAACACTCTCAGATaGCTTGGTCTGTGGCTAAGAATTGCACTGTGGACTTGGATGTGT +
Preference number: 1 (lower is better)
Translates to: QPWRPESEIKENTLR*LGLWLRIALWTWMC
Trigger: ACACATCCAAGTCCACAGTGCAATTCTTAGCCACAGACCAAGGCATCTGAGAGTGTTTTCTTTGATTTCTGACTCCGGCCTCCATGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp ACTCTCAGATGCCTTGGTCTGTGGCTAAGAATTGCACTGTGGACTTaGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCT +
Preference number: 1 (lower is better)
Translates to: TLRCLGLWLRIALWT*MCGVGGSRIDRHFS
Trigger: AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAGTGCAATTCTTAGCCACAGACCAAGGCATCTGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 90 bp ATGGAGGCCGGAGTCAGAAATCAAAGAAAACACTCTCAGATGCCTTaGTCTGTGGCTAAGAATTGCACTGTGGACTTGGATGTGTGGCGT +
Preference number: 1 (lower is better)
Translates to: MEAGVRNQRKHSQMP*SVAKNCTVDLDVWR
Trigger: ACGCCACACATCCAAGTCCACAGTGCAATTCTTAGCCACAGACCAAGGCATCTGAGAGTGTTTTCTTTGATTTCTGACTCCGGCCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCCTGGGAGGGGCCCGGTaGAGCCGGATTCCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQALGGAR*SRIPGC
Trigger: GCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAG...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 90 bp GCACTGACCGAGGAGCTTTGCCTGCGACCCAGGTGGAGGTGGCCTTaGAGCAGTGAGGCCCCAGGGTCCTGCAGGGTGGGGTCTAGGGCA +
Preference number: 2 (lower is better)
Translates to: ALTEELCLRPRWRWP*SSEAPGSCRVGSRA
Trigger: TGCCCTAGACCCCACCCTGCAGGACCCTGGGGCCTCACTGCTCAAAGGCCACCTCCACCTGGGTCGCAGGCAAAGCTCCTCGGTCAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp GTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGGGTGCTGACCAGGGATCTCCTGGCGTCTGGCCTTaGTTCCTTGCTTTCCGGGGT +
Preference number: 2 (lower is better)
Translates to: VGWEGPGAAGFQGADQGSPGVWP*FLAFRG
Trigger: ACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGG...AGATCCCTGGTCAGCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCGACCTGCCCCTCACCTaGCGTCTGGCCTTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQADLPLT*RLALLP
Trigger: AGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTC...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp GTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGGGTGCTGACCAGGGATCTCTGGCCTTGCTTCCTTaGTTTCCGGGGTCTCCTCAC +
Preference number: 2 (lower is better)
Translates to: VGWEGPGAAGFQGADQGSLALLP*FPGSPH
Trigger: GTGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAG...AGATCCCTGGTCAGCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp GGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTGCTCAGCTGAGCAGGGAATaGGTAGCAGCAGCAGCTCTC +
Preference number: 2 (lower is better)
Translates to: GSSPWGSQSQGIPGPRPAQLSRE*VAAAAL
Trigger: GAGAGCTGCTGCTGCTACCCATTCCCTGCTCAGCTG...AGCAGGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGGATGGCAGCCAGGCCTaGCACTCAGCGGAAGCTCGG +
Preference number: 2 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWDGSQA*HSAEAR
Trigger: CCGAGCTTCCGCTGAGTGCCAGGCCTGGCTGCCATC...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 90 bp GTGAAGCCTGGGTTCCTTCCTCAGAGGGATCCTCTGGAGCGGGACTaGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGGGCCGGTG +
Preference number: 2 (lower is better)
Translates to: VKPGFLPQRDPLERD*LRTEAGELPWMGPV
Trigger: CACCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGATCCCTCTGAGGAAGGAACCCAGGCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 90 bp GAGCGTGTGGCGTGGGAGGGTGGTGCTGGGAGTCACCTTCTGGCTTaGCAGCTTTCCTGTGGTCCTGAACGGCCACATAGCCCCTCGGAG +
Preference number: 2 (lower is better)
Translates to: ERVAWEGGAGSHLLA*QLSCGPERPHSPSE
Trigger: CTCCGAGGGGCTATGTGGCCGTTCAGGACCACAGGAAAGCTGCAAAGCCAGAAGGTGACTCCCAGCACCACCCTCCCACGCCACACGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGCAGAGGCGGGTGAACTaGCTTGGATGGGGCCGGTGT +
Preference number: 2 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWQRRVN*LGWGRC
Trigger: ACACCGGCCCCATCCAAGGCAGTTCACCCGCCTCTG...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCATTGAGGGGTGAAGCCTaGGTTCCTTCCTCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: PEVNALCGLGGARCSRIPLRGEA*VPSSEG
Trigger: TCCCTCTGAGGAAGGAACCCAGGCTTCACCCCTCAA...TGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 90 bp CTGCCTCCCAGGGGAGCCTCATGCTCCAGACCAAGGGTCACAACTTaGACAGCACATGACCGGGTCACCCACCAAGGCCTCCTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: LPPRGASCSRPRVTT*TAHDRVTHQGLLQV
Trigger: GACCTGGAGGAGGCCTTGGTGGGTGACCCGGTCATGTGCTGTCAAAGTTGTGACCCTTGGTCTGGAGCATGAGGCTCCCCTGGGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 90 bp GAAAGGCCTGGACCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTaGCTTTCCGGGGTCTCCTCACTGCAGCTGAGCAGGGAATGGGTA +
Preference number: 2 (lower is better)
Translates to: ERPGPAPHLASGLAS*LSGVSSLQLSREWV
Trigger: TACCCATTCCCTGCTCAGCTGCAGTGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR TCA 90 bp GGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTGCTCAAGGGTCACAACTTTaGCAGCACATGACCGGGTCA +
Preference number: 2 (lower is better)
Translates to: GSSPWGSQSQGIPGPRPAQGSQL*QHMTGS
Trigger: TGACCCGGTCATGTGCTGTCAAAGTTGTGACCCTTG...AGCAGGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR TCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGCGGATTCCAGGGTGCTaGCCAGGGATCTGCGACTCA +
Preference number: 2 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWRIPGC*PGICDS
Trigger: TGAGTCGCAGATCCCTGGTCAGCACCCTGGAATCCG...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp CTCCGAGTGAGGGTTGCATCGTCCCGGTCTGAGGTGCACGGCCTTGAGCAACTGGCTCTCGAGTGCCAGTaGGTGAACCGTTGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: LRVRVASSRSEVHGLEQLALECQ*VNRWGG
Trigger: ACCTCCCCAACGGTTCACGCACTGGCACTCGAGAGC...CAGTTGCTCAAGGCCGTGCACCTCAGACCGGGACGATGCAACCCTCACTCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 90 bp TGGATGGCAGCCAGGCCTGGCACTCAGCGGAAGCTCGGAAACCTGTaGAGGGGTGAAGCCTGGGTTCCTTCCTCAGAGGGATCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: WMAARPGTQRKLGNL*RGEAWVPSSEGSSG
Trigger: TCCAGAGGATCCCTCTGAGGAAGGAACCCAGGCTTCACCCCTCAACAGGTTTCCGAGCTTCCGCTGAGTGCCAGGCCTGGCTGCCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR TCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGCAATCCCCTGGATGCTaGGAGCAGGCTCTCTGGGAA +
Preference number: 2 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWQSPGC*EQALWE
Trigger: TTCCCAGAGAGCCTGCTCTCAGCATCCAGGGGATTG...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp ATCCTCTGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGCCCAGGGGAGCCTCATaGTCCAGACCAAGGGTCACA +
Preference number: 2 (lower is better)
Translates to: ILWSGTCSGQRRVNCLGWPRGAS*SRPRVT
Trigger: TGTGACCCTTGGTCTGGAGCATGAGGCTCCCCTGGG...CCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTCGTCCCGGTCTGAGGTaGACGGCCTTGAGCAACTGG +
Preference number: 2 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSRPGLR*TALSNW
Trigger: CCAGTTGCTCAAGGCCGTGCACCTCAGACCGGGACG...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CAGTTTCCATGGAGACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGTCCTCCAGGTCCGGCTaGCCCCAGCCTCTGACCCCA +
Preference number: 2 (lower is better)
Translates to: QFPWRPQMRPHFPDSSRRSSRSG*PQPLTP
Trigger: TGGGGTCAGAGGCTGGGGCCAGCCGGACCTGGAGGA...CCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp GTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGGGTGCTGACCAGGGATCTAGATGCCTTGGTCTGTaGCTAAGAATTGCACTGTGG +
Preference number: 2 (lower is better)
Translates to: VGWEGPGAAGFQGADQGSRCLGL*LRIALW
Trigger: CCACAGTGCAATTCTTAGCCACAGACCAAGGCATCT...AGATCCCTGGTCAGCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACGGAGAGAGGGCCCTGTaGAGATCCTGGGCTGGAGAT +
Preference number: 2 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYGERAL*RSWAGD
Trigger: ATCTCCAGCCCAGGATCTGCACAGGGCCCTCTCTCC...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR TCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTAGCTCGGAAACCTGTTaGGGGGTGAAGCCTGGGTTC +
Preference number: 2 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSSSETC*GVKPGF
Trigger: GAACCCAGGCTTCACCCCTCAACAGGTTTCCGAGCT...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGATTGCACTGTGGACTTaGATGTGTGGCGTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWIALWT*MCGVGG
Trigger: GCCACCAACGCCACACATCCAAGTCCACAGTGCAAT...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCTAAGAATTGCACTGTaGACTTGGATGTGTGGCGTT +
Preference number: 2 (lower is better)
Translates to: EPEVNALCGLGGARCSRILRIAL*TWMCGV
Trigger: AACGCCACACATCCAAGTCCACAGTGCAATTCTTAG...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGAGACTCAAGAGGGGCTaGTTCAGTCATGGTCCAGAG +
Preference number: 2 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWRLKRG*FSHGPE
Trigger: CTCTGGACCATGACTGAACCAGCCCCTCTTGAGTCT...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTCCCGGCCCGCCTGCCTaGGCATGTAGAGACCTTGCC +
Preference number: 2 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWAPGPPA*ACRDLA
Trigger: GGCAAGGTCTCTACATGCCCAGGCAGGCGGGCCGGG...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTGCCTGCGGAAAGGCCTaGACCTGCCCCTCACCTGGC +
Preference number: 2 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSACGKA*TCPSPG
Trigger: GCCAGGTGAGGGGCAGGTCCAGGCCTTTCCGCAGGC...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CAGTTTCCATGGAGACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGCTGCAGGCTGCTGGGTaGGGCTGTAAGAAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: QFPWRPQMRPHFPDSSRRLQAAG*GCKKPL
Trigger: GAGAGGCTTCTTACAGCCCCACCCAGCAGCCTGCAG...CCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACGTGAACTGCCTTGGATaGGGCCGGTGTGAAGCTTTC +
Preference number: 2 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYVNCLG*GRCEAF
Trigger: GAAAGCTTCACACCGGCCCCATCCAAGGCAGTTCAC...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CAGTTTCCATGGAGACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGCCCTCGGAGCCTTGGTaGCTCATCTGCAGAGTGGGA +
Preference number: 2 (lower is better)
Translates to: QFPWRPQMRPHFPDSSRRPSEPW*LICRVG
Trigger: TCCCACTCTGCAGATGAGCCACCAAGGCTCCGAGGG...CCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CAGTTTCCATGGAGACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGAGCCCCTCGGAGCCTTaGTGGCTCATCTGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: QFPWRPQMRPHFPDSSRRSPSEP*WLICRV
Trigger: CACTCTGCAGATGAGCCACCAAGGCTCCGAGGGGCT...CCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTTTCCATCACCAGCCATaGAGGCCGGAGTCAGAAATC +
Preference number: 2 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSFHHQP*RPESEI
Trigger: GATTTCTGACTCCGGCCTCCATGGCTGGTGATGGAA...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR TCA 90 bp TGGGCAGTCTTCCATTTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGATCGAGTGCCAGTGCGTaGACCGTTGGGGAGGTTTCC +
Preference number: 2 (lower is better)
Translates to: WAVFHFRVNLASTAGTRRSSASA*TVGEVS
Trigger: GGAAACCTCCCCAACGGTTCACGCACTGGCACTCGA...TCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAAATGGAAGACTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR TCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTGCACGTGCGGGAGCCTaGGGTGAACGCACTGTGTGG +
Preference number: 2 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIARAGA*GERTVW
Trigger: CCACACAGTGCGTTCACCTCAGGCTCCCGCACGTGC...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp TGGGCAGTCTTCCATTTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCAGCAGCTCTCGAGTaGCAGTGCGTGAACCGTTGG +
Preference number: 2 (lower is better)
Translates to: WAVFHFRVNLASTAGTRRAAALE*QCVNRW
Trigger: CCAACGGTTCACGCACTGGCACTCGAGAGCTGCTGC...TCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAAATGGAAGACTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTGGAAAGGCCTGGACCTaGCCCTCACCTGGCGTCTGG +
Preference number: 2 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIGKAWT*PSPGVW
Trigger: CCAGACGCCAGGTGAGGGGCAGGTCCAGGCCTTTCC...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTCTCTGGAGCGGGACTTaGTCAGGACAGAGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSLWSGT*SGQRRV
Trigger: CACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAG...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTCCCAAGTCACCCTCTTaGCTCACGGGGGCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIPKSPS*LTGAAA
Trigger: AGCTGCAGCCCCCGTGAGGCAAGAGGGTGACTTGGG...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp ACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGGGCTAATAAGGAGGCGGTGTGAAGCTTTCTaGTTGCTGAAGACCTGGGTC +
Preference number: 2 (lower is better)
Translates to: TSDEATFPGLLEKGLIRRRCEAF*LLKTWV
Trigger: GACCCAGGTCTTCAGCAACCAGAAAGCTTCACACCG...CCTCCTTATTAGCCCCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CAGTTTCCATGGAGACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGGACAGACATTTCTCTTaGGCTCACGAGAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: QFPWRPQMRPHFPDSSRRDRHFS*AHERLD
Trigger: GTCCAGCCTCTCGTGAGCCCAAGAGAAATGTCTGTC...CCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTGAAAACACTCTCAGATaGCTTGGTCTGTGGCTAAGA +
Preference number: 2 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSENTLR*LGLWLR
Trigger: TCTTAGCCACAGACCAAGGCATCTGAGAGTGTTTTC...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp ACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGGGCTAATAAGGAGGCAGTGCGTGAACCGTTaGGGAGGTTTCCCAAAAATG +
Preference number: 2 (lower is better)
Translates to: TSDEATFPGLLEKGLIRRQCVNR*GGFPKM
Trigger: CATTTTTGGGAAACCTCCCCAACGGTTCACGCACTG...CCTCCTTATTAGCCCCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGTTGCTGAAGACCTaGGTCCTGTGGGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSWLLKT*VLWGDR
Trigger: CCTGTCTCCCCACAGGACCCAGGTCTTCAGCAACCA...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR TCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTAACTTTGACAGCACATaGCCGGGTCACCCACCAAGG +
Preference number: 2 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWANFDST*PGHPPR
Trigger: CCTTGGTGGGTGACCCGGTCATGTGCTGTCAAAGTT...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTCAGGCCTCAAAGCACTaGGTTCTCATATTTTACAGA +
Preference number: 2 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSQASKH*VLIFYR
Trigger: TCTGTAAAATATGAGAACCCAGTGCTTTGAGGCCTG...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTATCTGTGGGTGCACCTaGAGCATTGAGGAAGCTGGA +
Preference number: 2 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWAICGCT*SIEEAG
Trigger: TCCAGCTTCCTCAATGCTGCAGGTGCACCCACAGAT...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTAGGGATGTTCAGAGATaGCCTTGGCAGCACAGTGGG +
Preference number: 2 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIRDVQR*PWQHSG
Trigger: CCCACTGTGCTGCCAAGGCCATCTCTGAACATCCCT...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTGAGGTTTCCCAAAAATaGACGTTCCTCGGCCTTCTC +
Preference number: 2 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWAEVSQK*TFLGLL
Trigger: GAGAAGGCCGAGGAACGTGCATTTTTGGGAAACCTC...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR GCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTTGTGTTATCTGTGGGTaGACCTGCAGCATTGAGGAA +
Preference number: 2 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWACVICG*TCSIEE
Trigger: TTCCTCAATGCTGCAGGTGCACCCACAGATAACACA...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 72 bp GACCCAGGCCTGCTGGGCACGTGCGGGAGCCTGAGGTaGACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCA +
Preference number: 3 (lower is better)
Translates to: DPGLLGTCGSLR*THCVGWEGPGA
Trigger: TGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTCCCGCACGTGCCCAGCAGGCCTGGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 72 bp ACCTGGACCCAGGCCTGCTGGGCACGTGCGGGAGCCTaGGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCG +
Preference number: 3 (lower is better)
Translates to: TWTQACWARAGA*GERTVWAGRGP
Trigger: CGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTCCCGCACGTGCCCAGCAGGCCTGGGTCCAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp GGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTGCTCCTCTGGAGCGGGACTaGCTCAGGACAGAGGCGGGT +
Preference number: 3 (lower is better)
Translates to: GSSPWGSQSQGIPGPRPAPLERD*LRTEAG
Trigger: ACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGG...AGCAGGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 72 bp CTGCCTCTCCCCGTGAAGACGCCATGCAGCGCAGGCTaGTTTACAGACTCGTACCCGGGCGCTGGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: LPLPVKTPCSAG*FTDSYPGAGEG
Trigger: CCCCTCCCCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACGGGGAGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp GGTGGCCTGCGGAAAGGCCTGGACCTGCCCCTCACCTaGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCT +
Preference number: 3 (lower is better)
Translates to: GGLRKGLDLPLT*RLALLPCFPGS
Trigger: AGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGCCTTTCCGCAGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp GGCTGGAGGTGCTCTAGGAGAGGTGGGTCCAGCCCCTaGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGG +
Preference number: 3 (lower is better)
Translates to: GWRCSRRGGSSP*GSQSQGIPGPR
Trigger: CCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCTCTCCTAGAGCACCTCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp CTGACCGAGGAGCTTTGCCTGCGACCCAGGTGGAGGTaGCCTTTGAGCAGTGAGGCCCCAGGGTCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LTEELCLRPRWR*PLSSEAPGSCR
Trigger: CCTGCAGGACCCTGGGGCCTCACTGCTCAAAGGCCACCTCCACCTGGGTCGCAGGCAAAGCTCCTCGGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp TGGGCACTGACCGAGGAGCTTTGCCTGCGACCCAGGTaGAGGTGGCCTTTGAGCAGTGAGGCCCCAGGGTCC +
Preference number: 3 (lower is better)
Translates to: WALTEELCLRPR*RWPLSSEAPGS
Trigger: GGACCCTGGGGCCTCACTGCTCAAAGGCCACCTCCACCTGGGTCGCAGGCAAAGCTCCTCGGTCAGTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp CAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTaGGGAGGGGATAGGGAAGCTGGCCGCAGGCCTGTC +
Preference number: 3 (lower is better)
Translates to: QRRLIYRLVPGR*GGDREAGRRPV
Trigger: GACAGGCCTGCGGCCAGCTTCCCTATCCCCTCCCCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp GTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGGGTGCTGACCAGGGATCTTCTGGCCTTGCTTCCTaGCTTTCCGGGGTCTCCTCA +
Preference number: 3 (lower is better)
Translates to: VGWEGPGAAGFQGADQGSSGLAS*LSGVSS
Trigger: TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGA...AGATCCCTGGTCAGCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp GAATGTTGGCTGCCCCCAGGAGTAGCCGCCTGTTCTTaGGAATTCTGTGCTGACCGCGGCAGCCCCGCAGGG +
Preference number: 3 (lower is better)
Translates to: ECWLPPGVAACS*EFCADRGSPAG
Trigger: CCCTGCGGGGCTGCCGCGGTCAGCACAGAATTCCCAAGAACAGGCGGCTACTCCTGGGGGCAGCCAACATTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp CAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTaGGGCCAAGGGGATACCCCACCAGCATCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: QGPQNWRPSWHI*GQGDTPPASWA
Trigger: GGCCCAGGATGCTGGTGGGGTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp GCCTGGACCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCCAAGGGTCACAACTTaGACAGCACATGACCGGGTC +
Preference number: 3 (lower is better)
Translates to: AWTCPSPGVWPCFLAFRGPRVTT*TAHDRV
Trigger: GACCCGGTCATGTGCTGTCAAAGTTGTGACCCTTGG...ACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp ATCCTCTGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGACCTGGCGTCTGGCCTaGCTTCCTTGCTTTCCGGGG +
Preference number: 3 (lower is better)
Translates to: ILWSGTCSGQRRVNCLGWTWRLA*LPCFPG
Trigger: CCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGT...CCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCAATTGCACTGTGGACTaGGATGTGTGGCGTTGGTGG +
Preference number: 3 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQANCTVD*DVWRWW
Trigger: CCACCAACGCCACACATCCAAGTCCACAGTGCAATT...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp CTTTCCGGGGTCTCCTCACTGCAGCTGAGCAGGGAATaGGTAGCAGCAGCAGCTCTCGAGTGCCAGTGCGTG +
Preference number: 3 (lower is better)
Translates to: LSGVSSLQLSRE*VAAAALECQCV
Trigger: CACGCACTGGCACTCGAGAGCTGCTGCTGCTACCCATTCCCTGCTCAGCTGCAGTGAGGAGACCCCGGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp AGCAAACAGAGGCGTAGGGATGTTCAGAGATGGCCTTaGCAGCACAGTGGGGTGGCTAGCGGGGCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: SKQRRRDVQRWP*QHSGVASGAQP
Trigger: GGGCTGAGCCCCGCTAGCCACCCCACTGTGCTGCCAAGGCCATCTCTGAACATCCCTACGCCTCTGTTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp GAGGACGGAGCGGGTTACACAGGCTCCCTGGAATGTTaGCTGCCCCCAGGAGTAGCCGCCTGTTCTTGGGAA +
Preference number: 3 (lower is better)
Translates to: EDGAGYTGSLEC*LPPGVAACSWE
Trigger: TTCCCAAGAACAGGCGGCTACTCCTGGGGGCAGCCAACATTCCAGGGAGCCTGTGTAACCCGCTCCGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp TCTCGAGTGCCAGTGCGTGAACCGTTGGGGAGGTTTCCCAAAAATGCACGTTCCCCCCAAGTCACCCTCTaGCCTCACGGGGGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: SRVPVREPLGRFPKNARSPQVTL*PHGGCS
Trigger: GCTGCAGCCCCCGTGAGGCAAGAGGGTGACTTGGGG...GGAACGTGCATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGGCACTCGAGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 72 bp GGGGAGCCTCATGCTCCAGACCAAGGGTCACAACTTTaGCAGCACATGACCGGGTCACCCACCAAGGCCTCC +
Preference number: 3 (lower is better)
Translates to: GEPHAPDQGSQL*QHMTGSPTKAS
Trigger: GGAGGCCTTGGTGGGTGACCCGGTCATGTGCTGTCAAAGTTGTGACCCTTGGTCTGGAGCATGAGGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR GCA 72 bp TGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTaGCTTGGATGGGGCCGGTGTGAAGCTTTCTGGTTG +
Preference number: 3 (lower is better)
Translates to: WSGTCSGQRRVN*LGWGRCEAFWL
Trigger: CAACCAGAAAGCTTCACACCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR GCA 72 bp GGTTCCTTCCTCAGAGGGATCCTCTGGAGCGGGACTTaGTCAGGACAGAGGCGGGTGAACTGCCTTGGATGG +
Preference number: 3 (lower is better)
Translates to: GSFLRGILWSGT*SGQRRVNCLGW
Trigger: CCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGATCCCTCTGAGGAAGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR GCA 72 bp CGTGGGAGGGTGGTGCTGGGAGTCACCTTCTGGCTTTaGAGCTTTCCTGTGGTCCTGAACGGCCACATAGCC +
Preference number: 3 (lower is better)
Translates to: RGRVVLGVTFWL*SFPVVLNGHIA
Trigger: GGCTATGTGGCCGTTCAGGACCACAGGAAAGCTGCAAAGCCAGAAGGTGACTCCCAGCACCACCCTCCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp CAGCGGAAGCTCGGAAACCTGTTGAGGGGTGAAGCCTaGGTTCCTTCCTCAGAGGGATCCTCTGGAGCGGGA +
Preference number: 3 (lower is better)
Translates to: QRKLGNLLRGEA*VPSSEGSSGAG
Trigger: TCCCGCTCCAGAGGATCCCTCTGAGGAAGGAACCCAGGCTTCACCCCTCAACAGGTTTCCGAGCTTCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 72 bp TGGCACTCAGCGGAAGCTCGGAAACCTGTTGAGGGGTaGAGCCTGGGTTCCTTCCTCAGAGGGATCCTCTGG +
Preference number: 3 (lower is better)
Translates to: WHSAEARKPVEG*SLGSFLRGILW
Trigger: CCAGAGGATCCCTCTGAGGAAGGAACCCAGGCTTCACCCCTCAACAGGTTTCCGAGCTTCCGCTGAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp GCAGCAGCAGCTCTCGAGTGCCAGTGCGTGAACCGTTaGGGAGGTTTCCCAAAAATGCACGTTCCTCGGCCT +
Preference number: 3 (lower is better)
Translates to: AAAALECQCVNR*GGFPKMHVPRP
Trigger: AGGCCGAGGAACGTGCATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGGCACTCGAGAGCTGCTGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp CATCGTCCCGGTCTGAGGTGCACGGCCTTGAGCAACTaGCTGATGATCAAGGACGGGGAGGGGGTCAAGTTT +
Preference number: 3 (lower is better)
Translates to: HRPGLRCTALSN*LMIKDGEGVKF
Trigger: AAACTTGACCCCCTCCCCGTCCTTGATCATCAGCCAGTTGCTCAAGGCCGTGCACCTCAGACCGGGACGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp GTGAACTGCCTTGGATGGGGCCGGTGTGAAGCTTTCTaGTTGCTGAAGACCTGGGTCCTGTGGGGAGACAGG +
Preference number: 3 (lower is better)
Translates to: VNCLGWGRCEAF*LLKTWVLWGDR
Trigger: CCTGTCTCCCCACAGGACCCAGGTCTTCAGCAACCAGAAAGCTTCACACCGGCCCCATCCAAGGCAGTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp GGTCCTGAACGGCCACATAGCCCCTCGGAGCCTTGGTaGCTCATCTGCAGAGTGGGAGCACCTTCCTACATT +
Preference number: 3 (lower is better)
Translates to: GPERPHSPSEPW*LICRVGAPSYI
Trigger: AATGTAGGAAGGTGCTCCCACTCTGCAGATGAGCCACCAAGGCTCCGAGGGGCTATGTGGCCGTTCAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp CAGGCCATATACCTGCTGCCACAGCAGCTACTAGAGTaGGGACGAGCTGGGCCCAGTTTCCATGGAGACCTC +
Preference number: 3 (lower is better)
Translates to: QAIYLLPQQLLE*GRAGPSFHGDL
Trigger: GAGGTCTCCATGGAAACTGGGCCCAGCTCGTCCCCACTCTAGTAGCTGCTGTGGCAGCAGGTATATGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGTGGGCTGGAGATAATTaGGGAGGAGGTAAGTCCCCA +
Preference number: 3 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWWAGDN*GGGKSP
Trigger: TGGGGACTTACCTCCTCCCAAATTATCTCCAGCCCA...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp ACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGGGCTAATAAGGAGGGGGCATGTAGAGACCTaGCCTTTCCAGCTGCCTCCC +
Preference number: 3 (lower is better)
Translates to: TSDEATFPGLLEKGLIRRGHVET*PFQLPP
Trigger: GGGAGGCAGCTGGAAAGGCAAGGTCTCTACATGCCC...CCTCCTTATTAGCCCCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp ATCCTCTGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGTGTGAAGCTTTCTGGTaGCTGAAGACCTGGGTCCTG +
Preference number: 3 (lower is better)
Translates to: ILWSGTCSGQRRVNCLGWCEAFW*LKTWVL
Trigger: CAGGACCCAGGTCTTCAGCAACCAGAAAGCTTCACA...CCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp ACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATaGGGCCGGTGTGAAGCTTTCTGGTTGCTGAAGACC +
Preference number: 3 (lower is better)
Translates to: TCSGQRRVNCLG*GRCEAFWLLKT
Trigger: GGTCTTCAGCAACCAGAAAGCTTCACACCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp ACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGGGCTAATAAGGAGGCCAGTGCGTGAACCGTaGGGGAGGTTTCCCAAAAAT +
Preference number: 3 (lower is better)
Translates to: TSDEATFPGLLEKGLIRRPVREP*GRFPKN
Trigger: ATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGG...CCTCCTTATTAGCCCCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR-3UTR CAA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGTTCAGAGATGGCCTaGGCAGCACAGTGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSCSEMA*AAQWGG
Trigger: GCCACCCCACTGTGCTGCCAAGGCCATCTCTGAACA...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 72 bp TTCCCCGGGAACACGTCCACGGTGAGGTCATGTCCGTaGGATGAATCTGTGCTTTTCCTCCTGGTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: FPGNTSTVRSCP*DESVLFLLVLP
Trigger: AGGAAGAACCAGGAGGAAAAGCACAGATTCATCTCACGGACATGACCTCACCGTGGACGTGTTCCCGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 72 bp GGAAGAAGTGAGCATTCTAAGGGTCCGCAATCTCTCTaGACCCTTATGCAGCAAAGGGGTCTGCGTGGGGAT +
Preference number: 3 (lower is better)
Translates to: GRSEHSKGPQSL*TLMQQRGLRGD
Trigger: ATCCCCACGCAGACCCCTTTGCTGCATAAGGGTTCAGAGAGATTGCGGACCCTTAGAATGCTCACTTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 72 bp AGGAGGAATCTAGAGCCACTCCAATCCCCTGGATGCTaGGAGCAGGCTCTCTGGGAAGAAGTGAGCATTCTA +
Preference number: 3 (lower is better)
Translates to: RRNLEPLQSPGC*EQALWEEVSIL
Trigger: TAGAATGCTCACTTCTTCCCAGAGAGCCTGCTCTCAGCATCCAGGGGATTGGAGTGGCTCTAGATTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp TTGGGCTCACGAGAGGCTGGACAGGCCTCAAAGCACTaGGTTCTCATATTTTACAGACCAGCAAACAGAGGC +
Preference number: 3 (lower is better)
Translates to: LGSREAGQASKH*VLIFYRPANRG
Trigger: GCCTCTGTTTGCTGGTCTGTAAAATATGAGAACCCAGTGCTTTGAGGCCTGTCCAGCCTCTCGTGAGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR TCA 72 bp CATTATTACGAGGATTCCCCGGGAACACGTCCACGGTaGGGTCATGTCCGTGAGATGAATCTGTGCTTTTCC +
Preference number: 3 (lower is better)
Translates to: HYYEDSPGTRPR*GHVREMNLCFS
Trigger: GGAAAAGCACAGATTCATCTCACGGACATGACCTCACCGTGGACGTGTTCCCGGGGAATCCTCGTAATAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp TGCCTTGGTCTGTGGCTAAGAATTGCACTGTGGACTTaGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGA +
Preference number: 3 (lower is better)
Translates to: CLGLWLRIALWT*MCGVGGSRIDR
Trigger: TCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAGTGCAATTCTTAGCCACAGACCAAGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp CATGGTCCAGAGGGAATGTCCTTCCATCACCAGCCATaGAGGCCGGAGTCAGAAATCAAAGAAAACACTCTC +
Preference number: 3 (lower is better)
Translates to: HGPEGMSFHHQP*RPESEIKENTL
Trigger: GAGAGTGTTTTCTTTGATTTCTGACTCCGGCCTCCATGGCTGGTGATGGAAGGACATTCCCTCTGGACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CCA 72 bp GAAATCAAAGAAAACACTCTCAGATGCCTTGGTCTGTaGCTAAGAATTGCACTGTGGACTTGGATGTGTGGC +
Preference number: 3 (lower is better)
Translates to: EIKENTLRCLGL*LRIALWTWMCG
Trigger: GCCACACATCCAAGTCCACAGTGCAATTCTTAGCCACAGACCAAGGCATCTGAGAGTGTTTTCTTTGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTGCTCCTCCTGGGCGCCGTTaGCGGCCCCCACGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GSSPWGSQSQGIPGPRPAPPGRR*RPPRAV
Trigger: GACAGCACGTGGGGGCCGCCAACGGCGCCCAGGAGG...AGCAGGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCACCTGGACCCAGGCCTaGTGGGCACGTGCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQATWTQA*WARAGA
Trigger: GGCTCCCGCACGTGCCCAGCAGGCCTGGGTCCAGGT...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp CCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCATGGCCGAGCCCTGCCTaGTCTGACCCTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PEVNALCGLGGARCSRIPWPSPA*SDPGPW
Trigger: CCAAGGCCCAGGGTCAGAGCAGGCAGGGCTCGGCCA...TGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTGCTAGCCAGCAGCACCGCTaGCACCAGCCACAGCGTCCG +
Preference number: 4 (lower is better)
Translates to: GSSPWGSQSQGIPGPRPASQQHR*HQPQRP
Trigger: CGGACGCTGTGGCTGGTGGCAGCGGTGCTGCTGGCT...AGCAGGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTGGCTTGGCCGCGCAGTaGACGGCGGCCATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRIGLAAQ*TAAMRK
Trigger: CTTCCTCATGGCCGCCGTGCACTGCGCGGCCAAGCC...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCACACAGGTGGTCAGGTaGCGTGGGCGGCGGCACGAG +
Preference number: 4 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQATQVVR*RGRRHE
Trigger: CTCGTGCCGCCGCCCACGCCACCTGACCACCTGTGT...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTTCCTCCAGGTCCGGCTaGCCCCAGCCTCTGACCCCA +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRISSRSG*PQPLTP
Trigger: TGGGGTCAGAGGCTGGGGCCAGCCGGACCTGGAGGA...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCACCCGGCCCGCCTGCCTaGGCATGTAGAGACCTTGCC +
Preference number: 4 (lower is better)
Translates to: PEVNALCGLGGARCSRIPPGPPA*ACRDLA
Trigger: GGCAAGGTCTCTACATGCCCAGGCAGGCGGGCCGGG...TGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTGGTGGGTCCAGCCCCTaGGGCTCCCAGTCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRIGGSSP*GSQSQG
Trigger: CCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACC...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTGCAGCGTTGCCAGGCTaGTCTGCACGAAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRIAALPG*SARSPG
Trigger: TCCCGGGCTTCGTGCAGACCAGCCTGGCAACGCTGC...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCGGCAGCCAAGGAAGATaGGATCCGCGCAGGCCACGT +
Preference number: 4 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQAGSQGR*DPRRPR
Trigger: ACGTGGCCTGCGCGGATCTCATCTTCCTTGGCTGCC...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCAGCCTGCCTCTCCCCGTaGAGACGCCATGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: PAPHLASGLASLLSGVSSACLSP*RRHAAQ
Trigger: CTGCGCTGCATGGCGTCTTCACGGGGAGAGGCAGGC...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTGGGACAGCCAGTAGATaGCGAAGGGCAGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRIGTASR*RRAGRR
Trigger: TCTGCGGCCTGCCCTTCGGCATCTACTGGCTGTCCC...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp CCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCACTGACCGAGGAGCTTTaGCTGCGACCCAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PEVNALCGLGGARCSRIPLTEEL*LRPRWR
Trigger: CCTCCACCTGGGTCGCAGGCAAAGCTCCTCGGTCAG...TGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGTCTCCCAGCGCTCGCTaGAGGACCAGCCGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWSPSAR*RTSRRG
Trigger: GCCCCTCCGGCTGGTCCTCCAGCGAGCGCTGGGAGA...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGACCTGCCCCTCACCTaGCGTCTGGCCTTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PEVNALCGLGGARCSRIPDLPLT*RLALLP
Trigger: AGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTC...TGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGGGTGCTGACCAGGGATCTGTCTCAAGGGATACCTaGACCCAGGCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: VGWEGPGAAGFQGADQGSVSRDT*TQACWA
Trigger: TGCCCAGCAGGCCTGGGTCCAGGTATCCCTTGAGAC...AGATCCCTGGTCAGCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCCGGATTCCAGGGTGCTaGCCAGGGATCTGCGACTCA +
Preference number: 4 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQARIPGC*PGICDS
Trigger: TGAGTCGCAGATCCCTGGTCAGCACCCTGGAATCCG...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCATGCGGGAGCCTGAGGTaGACGCACTGTGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAPHLASGLASLLSGVSSCGSLR*THCVGW
Trigger: CCAGCCCACACAGTGCGTTCACCTCAGGCTCCCGCA...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CTCCGAGTGAGGGTTGCATCGTCCCGGTCTGAGGTGCACGGCCTTGAGCAACTGGGGGCTGAGGACACCTaGGCCAGCCCTGGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LRVRVASSRSEVHGLEQLGAEDT*ASPGPV
Trigger: CACTGGACCAGGGCTGGCTCAGGTGTCCTCAGCCCC...CAGTTGCTCAAGGCCGTGCACCTCAGACCGGGACGATGCAACCCTCACTCGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCAGGTGGAGGTGGCCTTTaGGCAGTGAGGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PAPHLASGLASLLSGVSSGGGGL*AVRPQG
Trigger: ACCCTGGGGCCTCACTGCTCAAAGGCCACCTCCACC...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp GTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGGGTGCTGACCAGGGATCTCCATGCAGCGCAGGCTaGTTTACAGACTCGTACCCG +
Preference number: 4 (lower is better)
Translates to: VGWEGPGAAGFQGADQGSPCSAG*FTDSYP
Trigger: CGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGG...AGATCCCTGGTCAGCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTAAGTCCAGCCGGCCTTaGAGCAAGTCGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRIKSSRP*SKSGTM
Trigger: CATCGTCCCCGACTTGCTGCAAGGCCGGCTGGACTT...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp TGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGGGCCGGGTTGCCAGGCTGGTCTaGACGAAGCCCGGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: WSGTCSGQRRVNCLGWGRVARLV*TKPGKS
Trigger: GGACTTCCCGGGCTTCGTGCAGACCAGCCTGGCAAC...CCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GCCTGGACCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCCCAAGTCACCCTCTTaGCTCACGGGGGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AWTCPSPGVWPCFLAFRGPKSPS*LTGAAA
Trigger: AGCTGCAGCCCCCGTGAGGCAAGAGGGTGACTTGGG...ACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCGGCATCCAGCTGGAATaGGGCCGGTCAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQAGIQLE*GRSGRC
Trigger: ACACCTTCCTGACCGGCCCCATTCCAGCTGGATGCC...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCAGCACGAGTACCAGGCTaGGAAGAGGGCGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PAPHLASGLASLLSGVSSARVPG*EEGGQA
Trigger: TGCCTGGCCGCCCTCTTCCCAGCCTGGTACTCGTGC...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGAGTAGACGACGGGCTTaGCCGCGCAGTGCACGGCGG +
Preference number: 4 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWSRRRA*PRSARR
Trigger: CCGCCGTGCACTGCGCGGCCAAGCCCGTCGTCTACT...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGGCCTGCGGAAAGGCCTaGACCTGCCCCTCACCTGGC +
Preference number: 4 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWACGKA*TCPSPG
Trigger: GCCAGGTGAGGGGCAGGTCCAGGCCTTTCCGCAGGC...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTCCCCAAGTGGGGGCTaGAGGTGCTCTAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQASPSGG*RCSRRG
Trigger: ACCTCTCCTAGAGCACCTCCAGCCCCCACTTGGGGA...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GCCTGGACCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCGACCCAGGTGGAGGTaGCCTTTGAGCAGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AWTCPSPGVWPCFLAFRGRPRWR*PLSSEA
Trigger: GGCCTCACTGCTCAAAGGCCACCTCCACCTGGGTCG...ACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTGCTTGCCTGCGACCCAGGTaGAGGTGGCCTTTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSSPWGSQSQGIPGPRPACLRPR*RWPLSS
Trigger: ACTGCTCAAAGGCCACCTCCACCTGGGTCGCAGGCA...AGCAGGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGGGGGTTGCGGGTGGATaGGGTGGGCTGGGCACTGAC +
Preference number: 4 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWGVAGG*GGLGTD
Trigger: GTCAGTGCCCAGCCCACCCCATCCACCCGCAACCCC...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCATGTAGACATTGGAGCTaGGCAGCCAGAGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: PEVNALCGLGGARCSRIPCRHWS*AARGLP
Trigger: GGGCAGTCCTCTGGCTGCTCAGCTCCAATGTCTACA...TGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTGGAACACGTCCACGGTaGGGTCATGTCCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRIGTRPR*GHVREM
Trigger: CATCTCACGGACATGACCTCACCGTGGACGTGTTCC...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTGCTCTGGCCTTGCTTCCTTaGTTTCCGGGGTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GSSPWGSQSQGIPGPRPALALLP*FPGSPH
Trigger: GTGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAG...AGCAGGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCAAGTGGGGGCTGGAGGTaGTCTAGGAGAGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: PAPHLASGLASLLSGVSSSGGWR*SRRGGS
Trigger: GGACCCACCTCTCCTAGAGCACCTCCAGCCCCCACT...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCCCTTGGTGGCTCATCTaGAGAGTGGGAGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQAPWWLI*RVGAPS
Trigger: GGAAGGTGCTCCCACTCTGCAGATGAGCCACCAAGG...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGGGCCGGGCAAGTCGGGGACGATaGCCACCATGTGGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: WSGTCSGQRRVNCLGWGRASRGR*PPCGSQ
Trigger: TTGGCTGCCACATGGTGGCCATCGTCCCCGACTTGC...CCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTTGGTTGCTGAAGACCTaGGTCCTGTGGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRIWLLKT*VLWGDR
Trigger: CCTGTCTCCCCACAGGACCCAGGTCTTCAGCAACCA...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGGGTGCTGACCAGGGATCTGTGAACTGCCTTGGATaGGGCCGGTGTGAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: VGWEGPGAAGFQGADQGSVNCLG*GRCEAF
Trigger: GAAAGCTTCACACCGGCCCCATCCAAGGCAGTTCAC...AGATCCCTGGTCAGCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTGTGGGAGGGTGGTGCTaGGAGTCACCTTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRIVGGWC*ESPSGF
Trigger: AAAGCCAGAAGGTGACTCCCAGCACCACCCTCCCAC...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTACCCCACCAGCATCCTaGGCCATCAGGCCATATACC +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRITPPAS*AIRPYT
Trigger: GGTATATGGCCTGATGGCCCAGGATGCTGGTGGGGT...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GCCTGGACCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTAACTGGAGGCCAAGCTaGCACATCTGGGGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: AWTCPSPGVWPCFLAFRGNWRPS*HIWGQG
Trigger: CCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTT...ACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTGGCACTGCTCCACGCTaGCGGCCGCCAGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSGTAPR*RPPGDS
Trigger: TGAGTCTCCTGGCGGCCGTCAGCGTGGAGCAGTGCC...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp GTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGGGTGCTGACCAGGGATCTCAAGGGTCACAACTTTaGCAGCACATGACCGGGTCA +
Preference number: 4 (lower is better)
Translates to: VGWEGPGAAGFQGADQGSQGSQL*QHMTGS
Trigger: TGACCCGGTCATGTGCTGTCAAAGTTGTGACCCTTG...AGATCCCTGGTCAGCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp ATCCTCTGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGGGAAAGGCCTGGACCTaGCCCTCACCTGGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: ILWSGTCSGQRRVNCLGWGKAWT*PSPGVW
Trigger: CCAGACGCCAGGTGAGGGGCAGGTCCAGGCCTTTCC...CCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCAAGTCCCCAGAGCCTCTaGGCGGCTCCTGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: PAPHLASGLASLLSGVSSSPQSL*AAPVQC
Trigger: ACACTGAACAGGAGCCGCCCAGAGGCTCTGGGGACT...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGGGTGCTGACCAGGGATCTGCCCTGTGCAGATCCTaGGCTGGAGATAATTTGGGA +
Preference number: 4 (lower is better)
Translates to: VGWEGPGAAGFQGADQGSALCRS*AGDNLG
Trigger: TCCCAAATTATCTCCAGCCCAGGATCTGCACAGGGC...AGATCCCTGGTCAGCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GAGCCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCAAGGACCACAGAACTaGAGGCCAAGCTGGCACATC +
Preference number: 4 (lower is better)
Translates to: EPEVNALCGLGGARCSRIQGPQN*RPSWHI
Trigger: GATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTG...AATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp TGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGGGCCGGTGGATGGGGCCGGTGTaGAGCTTTCTGGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: WSGTCSGQRRVNCLGWGRWMGPV*SFLVAE
Trigger: TTCAGCAACCAGAAAGCTTCACACCGGCCCCATCCA...CCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACGCACGTGCGGGAGCCTaGGGTGAACGCACTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYARAGA*GERTVW
Trigger: CCACACAGTGCGTTCACCTCAGGCTCCCGCACGTGC...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTTTGGGAATTCTGTGCTaGCCGCGGCAGCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSLGILC*PRQPRR
Trigger: CCTGCGGGGCTGCCGCGGTCAGCACAGAATTCCCAA...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTTTGGCGGCCCCCACGTaGTGTCCAGCTTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSLAAPT*CPASLG
Trigger: GCCCAGAGAAGCTGGACAGCACGTGGGGGCCGCCAA...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp CAGTTTCCATGGAGACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGCTGGGAGGGGCCCGGTaGAGCCGGATTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: QFPWRPQMRPHFPDSSRRLGGAR*SRIPGC
Trigger: GCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAG...CCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CAGTTTCCATGGAGACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGAAGGCCACATCCTCCTaGGCGCCGTTGGCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QFPWRPQMRPHFPDSSRRKATSS*APLAAP
Trigger: GGGGGCCGCCAACGGCGCCCAGGAGGATGTGGCCTT...CCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTCCGAGTGAGGGTTGCATCGTCCCGGTCTGAGGTGCACGGCCTTGAGCAACTGCTGCAGGCTGCTGGGTaGGGCTGTAAGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LRVRVASSRSEVHGLEQLLQAAG*GCKKPL
Trigger: GAGAGGCTTCTTACAGCCCCACCCAGCAGCCTGCAG...CAGTTGCTCAAGGCCGTGCACCTCAGACCGGGACGATGCAACCCTCACTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACCCTGGCACATGCTCCTaGATGGCAGCCAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYPGTCS*MAARPG
Trigger: GCCAGGCCTGGCTGCCATCCAGGAGCATGTGCCAGG...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTTCCATCACCAGCCATaGAGGCCGGAGTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQAFHHQP*RPESEI
Trigger: GATTTCTGACTCCGGCCTCCATGGCTGGTGATGGAA...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 72 bp GCCAGGCCTGGCACTCAGCGGAAGCTCGGAAACCTGTaGAGGGGTGAAGCCTGGGTTCCTTCCTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ARPGTQRKLGNL*RGEAWVPSSEG
Trigger: TCCCTCTGAGGAAGGAACCCAGGCTTCACCCCTCAACAGGTTTCCGAGCTTCCGCTGAGTGCCAGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 72 bp GCAGGTGGGAGCCTGGACGGAAGCTCAGCCTCCAGTTaGGAGGCCAGCCCACATGGTCCTAATGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGGSLDGSSASS*EASPHGPNVLR
Trigger: CCTCAGGACATTAGGACCATGTGGGCTGGCCTCCAAACTGGAGGCTGAGCTTCCGTCCAGGCTCCCACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp TGGGCAGTCTTCCATTTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAAGGGCGGCCAGGCACTaGTCCACGCTGACGGCCGCC +
Preference number: 4 (lower is better)
Translates to: WAVFHFRVNLASTAGTRRRAARH*STLTAA
Trigger: GGCGGCCGTCAGCGTGGAGCAGTGCCTGGCCGCCCT...TCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAAATGGAAGACTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp ATCCTCTGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGGCAGCAGCTCTCGAGTaGCAGTGCGTGAACCGTTGG +
Preference number: 4 (lower is better)
Translates to: ILWSGTCSGQRRVNCLGWAAALE*QCVNRW
Trigger: CCAACGGTTCACGCACTGGCACTCGAGAGCTGCTGC...CCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACCGTCCCGGTCTGAGGTaGACGGCCTTGAGCAACTGG +
Preference number: 4 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYRPGLR*TALSNW
Trigger: CCAGTTGCTCAAGGCCGTGCACCTCAGACCGGGACG...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTCTCTGGAGCGGGACTTaGTCAGGACAGAGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSLWSGT*SGQRRV
Trigger: CACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAG...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACAGCACCCCTGGCACATaGTCCTGGATGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYSTPGT*SWMAAR
Trigger: CCTGGCTGCCATCCAGGAGCATGTGCCAGGGGTGCT...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGGCTCTCGCCCAGGTGTaGACAGCAAGAGAAACCCTG +
Preference number: 4 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWALAQV*TARETL
Trigger: CAGGGTTTCTCTTGCTGTCCACACCTGGGCGAGAGC...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CGTGAAGACGCCATGCAGCGCAGGCTGATTTACAGACTCGTACCCGGGCGCTGGCTCCTCCGAGTCACATaGCATCCAGCTGGAATGGGG +
Preference number: 4 (lower is better)
Translates to: REDAMQRRLIYRLVPGRWLLRVT*HPAGMG
Trigger: CCCCATTCCAGCTGGATGCCATGTGACTCGGAGGAG...CCAGCGCCCGGGTACGAGTCTGTAAATCAGCCTGCGCTGCATGGCGTCTTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TCTCGAGTGCCAGTGCGTGAACCGTTGGGGAGGTTTCCCAAAAATGCACGTTCCAGCGTCCGGCACAAGTaGCGGCTGGGCTCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SRVPVREPLGRFPKNARSSVRHK*RLGSPK
Trigger: CTTCGGGGAGCCCAGCCGCCACTTGTGCCGGACGCT...GGAACGTGCATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGGCACTCGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTATCACGTCCTGGAGGTaGGGAGAGAGGGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSITSWR*GERALC
Trigger: GCACAGGGCCCTCTCTCCCCACCTCCAGGACGTGAT...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp ATCCTCTGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGAGCCCCTCGGAGCCTTaGTGGCTCATCTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ILWSGTCSGQRRVNCLGWSPSEP*WLICRV
Trigger: CACTCTGCAGATGAGCCACCAAGGCTCCGAGGGGCT...CCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 72 bp GGGTTCCTTCCTCAGAGGGATCCTCTGGAGCGGGACTaGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATG +
Preference number: 4 (lower is better)
Translates to: GFLPQRDPLERD*LRTEAGELPWM
Trigger: CATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGATCCCTCTGAGGAAGGAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 72 bp GCGTGGGAGGGTGGTGCTGGGAGTCACCTTCTGGCTTaGCAGCTTTCCTGTGGTCCTGAACGGCCACATAGC +
Preference number: 4 (lower is better)
Translates to: AWEGGAGSHLLA*QLSCGPERPHS
Trigger: GCTATGTGGCCGTTCAGGACCACAGGAAAGCTGCAAAGCCAGAAGGTGACTCCCAGCACCACCCTCCCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTAACCCTGAACCTCCCTaGAGCCTTCCAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSNPEPP*SLPGRP
Trigger: AGGCCTGCCTGGAAGGCTGCAGGGAGGTTCAGGGTT...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACCCTGGCGTCTGGCCTTaGTTCCTTGCTTTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYPGVWP*FLAFRG
Trigger: ACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGG...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCAGTCACCTTCTGGCTTTaGAGCTTTCCTGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PAPHLASGLASLLSGVSSVTFWL*SFPVVL
Trigger: CAGGACCACAGGAAAGCTGCAAAGCCAGAAGGTGAC...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCTGAGGGGATGGTTGTGAGGCGGAGCGTGTaGCGTGGGAGGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FRVNLASTAGTRRAEGMVVRRSV*RGRVVL
Trigger: CAGCACCACCCTCCCACGCCACACGCTCCGCCTCAC...AACCATCCCCTCAGCTCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 72 bp AGGGGAGCCTCATGCTCCAGACCAAGGGTCACAACTTaGACAGCACATGACCGGGTCACCCACCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGASCSRPRVTT*TAHDRVTHQGL
Trigger: GAGGCCTTGGTGGGTGACCCGGTCATGTGCTGTCAAAGTTGTGACCCTTGGTCTGGAGCATGAGGCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
3UTR CAA 72 bp AGCAGCAGCAGCTCTCGAGTGCCAGTGCGTGAACCGTaGGGGAGGTTTCCCAAAAATGCACGTTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SSSSSRVPVREP*GRFPKNARSSA
Trigger: GGCCGAGGAACGTGCATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGGCACTCGAGAGCTGCTGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACAGCTCGGAAACCTGTTaGGGGGTGAAGCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYSSETC*GVKPGF
Trigger: GAACCCAGGCTTCACCCCTCAACAGGTTTCCGAGCT...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTGAAGAAGCGCAGCGTTaGCAGGCTGGTCTGCACGAA +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSEEAQR*QAGLHE
Trigger: TTCGTGCAGACCAGCCTGGCAACGCTGCGCTTCTTC...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTCACATGGCATCCAGCTaGAATGGGGCCGGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSHMASS*NGAGQE
Trigger: TTCCTGACCGGCCCCATTCCAGCTGGATGCCATGTG...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp ACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGGGCTAATAAGGAGGTCTGACCCTGGGCCTTaGATCTATCCTGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TSDEATFPGLLEKGLIRRSDPGP*IYPGRG
Trigger: GCCGCGGCCAGGATAGATCCAAGGCCCAGGGTCAGA...CCTCCTTATTAGCCCCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCTGAGGGGATGGTTGGCACAAGTGGCGGCTaGGCTCCCCGAAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: FRVNLASTAGTRRAEGMVGTSGG*APRRTG
Trigger: CCCAGTTCTTCGGGGAGCCCAGCCGCCACTTGTGCC...AACCATCCCCTCAGCTCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCACAGTGCGTGAACCGTTaGGGAGGTTTCCCAAAAATG +
Preference number: 4 (lower is better)
Translates to: PAPHLASGLASLLSGVSSQCVNR*GGFPKM
Trigger: CATTTTTGGGAAACCTCCCCAACGGTTCACGCACTG...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCTGAGGGGATGGTTGCTCAGCCCAGGCTGTaGGCTCCAAAGCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: FRVNLASTAGTRRAEGMVAQPRL*APKPPL
Trigger: GAGTGGGGGCTTTGGAGCCCACAGCCTGGGCTGAGC...AACCATCCCCTCAGCTCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp ATCCTCTGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGAGGGATGTTCAGAGATaGCCTTGGCAGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: ILWSGTCSGQRRVNCLGWRDVQR*PWQHSG
Trigger: CCCACTGTGCTGCCAAGGCCATCTCTGAACATCCCT...CCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp AGGTGGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCCTAAGAATTGCACTGTaGACTTGGATGTGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: RWVQPLGLPVSRDTWTQALRIAL*TWMCGV
Trigger: AACGCCACACATCCAAGTCCACAGTGCAATTCTTAG...GGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TGGGCAGTCTTCCATTTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGGTGAACGCACTGTGTaGGCTGGGAGGGGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: WAVFHFRVNLASTAGTRRGERTV*AGRGPV
Trigger: CACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACC...TCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAAATGGAAGACTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTAGAGTGGGGACGAGCTaGGCCCAGTTTCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSRVGTS*AQFPWR
Trigger: TCTCCATGGAAACTGGGCCCAGCTCGTCCCCACTCT...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACGTTACACAGGCTCCCTaGAATGTTGGCTGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYVTQAP*NVGCPQ
Trigger: CTGGGGGCAGCCAACATTCCAGGGAGCCTGTGTAAC...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCTGAGGGGATGGTTCTCGTACCCGGGCGCTaGGGAGGGGATAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: FRVNLASTAGTRRAEGMVLVPGR*GGDREA
Trigger: AGCTTCCCTATCCCCTCCCCAGCGCCCGGGTACGAG...AACCATCCCCTCAGCTCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp TCTCGAGTGCCAGTGCGTGAACCGTTGGGGAGGTTTCCCAAAAATGCACGTTCCTCGAGTGCCAGTGCGTaGACCGTTGGGGAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SRVPVREPLGRFPKNARSSSASA*TVGEVS
Trigger: GGAAACCTCCCCAACGGTTCACGCACTGGCACTCGA...GGAACGTGCATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGGCACTCGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp TGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGGGCCGGTCTGTGGCTAAGAATTaGACTGTGGACTTGGATGTG +
Preference number: 4 (lower is better)
Translates to: WSGTCSGQRRVNCLGWGRSVAKN*TVDLDV
Trigger: CACATCCAAGTCCACAGTGCAATTCTTAGCCACAGA...CCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCTGAGGGGATGGTTGCTGTCCAGCTTCTCTaGGCTCCATCATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: FRVNLASTAGTRRAEGMVAVQLL*APSWGG
Trigger: CCCGCCCCATGATGGAGCCCAGAGAAGCTGGACAGC...AACCATCCCCTCAGCTCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTGGTGGTCAGGTGGCGTaGGCGGCGGCACGAGTACCA +
Preference number: 4 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSGGQVA*AAARVP
Trigger: TGGTACTCGTGCCGCCGCCCACGCCACCTGACCACC...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCACACTCTCAGATGCCTTaGTCTGTGGCTAAGAATTGC +
Preference number: 4 (lower is better)
Translates to: PAPHLASGLASLLSGVSSHSQMP*SVAKNC
Trigger: GCAATTCTTAGCCACAGACCAAGGCATCTGAGAGTG...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCAGGTTCTTCCTTGTTCTaGGGGAAGTTTATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PAPHLASGLASLLSGVSSGSSLF*GKFMSW
Trigger: CCAGGACATAAACTTCCCCCAGAACAAGGAAGAACC...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TCTCGAGTGCCAGTGCGTGAACCGTTGGGGAGGTTTCCCAAAAATGCACGTTCCCCCTCGGAGCCTTGGTaGCTCATCTGCAGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SRVPVREPLGRFPKNARSPSEPW*LICRVG
Trigger: TCCCACTCTGCAGATGAGCCACCAAGGCTCCGAGGG...GGAACGTGCATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGGCACTCGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACGTAGCCGCCTGTTCTTaGGAATTCTGTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYVAACS*EFCADR
Trigger: GCGGTCAGCACAGAATTCCCAAGAACAGGCGGCTAC...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTGAGCCAGTGTGGGGCTaGGGACACCTGAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIEPVWG*GHLSQP
Trigger: GGGCTGGCTCAGGTGTCCTCAGCCCCACACTGGCTC...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACGGTCCGCAATCTCTCTaGACCCTTATGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYGPQSL*TLMQQR
Trigger: CCTTTGCTGCATAAGGGTTCAGAGAGATTGCGGACC...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CAGTTTCCATGGAGACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGCAATCCCCTGGATGCTaGGAGCAGGCTCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QFPWRPQMRPHFPDSSRRQSPGC*EQALWE
Trigger: TTCCCAGAGAGCCTGCTCTCAGCATCCAGGGGATTG...CCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTATCTGTGGGTGCACCTaGAGCATTGAGGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSICGCT*SIEEAG
Trigger: TCCAGCTTCCTCAATGCTGCAGGTGCACCCACAGAT...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TGGGCAGTCTTCCATTTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGGCTCCCTGGAATGTTaGCTGCCCCCAGGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: WAVFHFRVNLASTAGTRRGSLEC*LPPGVA
Trigger: GGCTACTCCTGGGGGCAGCCAACATTCCAGGGAGCC...TCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAAATGGAAGACTGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp ATCCTCTGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGTGTGTTATCTGTGGGTaGACCTGCAGCATTGAGGAA +
Preference number: 4 (lower is better)
Translates to: ILWSGTCSGQRRVNCLGWCVICG*TCSIEE
Trigger: TTCCTCAATGCTGCAGGTGCACCCACAGATAACACA...CCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTCAGAGGCGGGTGAACTaGCTTGGATGGGGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSQRRVN*LGWGRC
Trigger: ACACCGGCCCCATCCAAGGCAGTTCACCCGCCTCTG...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp CTCCGAGTGAGGGTTGCATCGTCCCGGTCTGAGGTGCACGGCCTTGAGCAACTGGAAAACACTCTCAGATaGCTTGGTCTGTGGCTAAGA +
Preference number: 4 (lower is better)
Translates to: LRVRVASSRSEVHGLEQLENTLR*LGLWLR
Trigger: TCTTAGCCACAGACCAAGGCATCTGAGAGTGTTTTC...CAGTTGCTCAAGGCCGTGCACCTCAGACCGGGACGATGCAACCCTCACTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTGATGGCAGCCAGGCCTaGCACTCAGCGGAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIDGSQA*HSAEAR
Trigger: CCGAGCTTCCGCTGAGTGCCAGGCCTGGCTGCCATC...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCTGAGGGGATGGTTGCCACTCCAATCCCCTaGATGCTGAGAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: FRVNLASTAGTRRAEGMVATPIP*MLRAGS
Trigger: AGAGCCTGCTCTCAGCATCCAGGGGATTGGAGTGGC...AACCATCCCCTCAGCTCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTGCTCGCTCTCTCTCCTaGTGCCCCGTTTGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIARSLS*CPVWGR
Trigger: TCTGCCCCAAACGGGGCATCAGGAGAGAGAGCGAGC...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp TGGGCAGTCTTCCATTTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGGGCACAAGGCGAGCTaGGGGGATGGTTGTGTTATC +
Preference number: 4 (lower is better)
Translates to: WAVFHFRVNLASTAGTRRGHKAS*GDGCVI
Trigger: GATAACACAACCATCCCCTCAGCTCGCCTTGTGCCC...TCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAAATGGAAGACTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTGTGAGGTCATGTCCGTaGGATGAATCTGTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSVRSCP*DESVLF
Trigger: GAAAAGCACAGATTCATCTCACGGACATGACCTCAC...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTGGGGCCAGGGGATGCTaGAGGAGTGTGTTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIGARGC*RSVFCS
Trigger: CGAGCAGAACACACTCCTGCAGCATCCCCTGGCCCC...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTCCCAGGGGAGCCTCATaGTCCAGACCAAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSPRGAS*SRPRVT
Trigger: TGTGACCCTTGGTCTGGAGCATGAGGCTCCCCTGGG...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTGCTCTCGAGTGCCAGTaGGTGAACCGTTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWAALECQ*VNRWGG
Trigger: ACCTCCCCAACGGTTCACGCACTGGCACTCGAGAGC...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTGGAGAGAGGGCCCTGTaGAGATCCTGGGCTGGAGAT +
Preference number: 4 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWAGERAL*RSWAGD
Trigger: ATCTCCAGCCCAGGATCTGCACAGGGCCCTCTCTCC...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTGGCTGGCCCCACACATaGTGCAACACAGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSGWPHT*CNTAEP
Trigger: TGGCTCTGCTGTGTTGCACCATGTGTGGGGCCAGCC...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTCCGAGTGAGGGTTGCATCGTCCCGGTCTGAGGTGCACGGCCTTGAGCAACTGCAGGCCTCAAAGCACTaGGTTCTCATATTTTACAGA +
Preference number: 4 (lower is better)
Translates to: LRVRVASSRSEVHGLEQLQASKH*VLIFYR
Trigger: TCTGTAAAATATGAGAACCCAGTGCTTTGAGGCCTG...CAGTTGCTCAAGGCCGTGCACCTCAGACCGGGACGATGCAACCCTCACTCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CAGTTTCCATGGAGACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGCTGGGAGTCACCTTCTaGCTTTGCAGCTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QFPWRPQMRPHFPDSSRRLGVTF*LCSFPV
Trigger: CACAGGAAAGCTGCAAAGCCAGAAGGTGACTCCCAG...CCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGTGGCGTGGGAGGGTaGTGCTGGGAGTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSCGVGG*CWESPS
Trigger: AGAAGGTGACTCCCAGCACCACCCTCCCACGCCACA...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp TCAAGGACCACAGAACTGGAGGCCAAGCTGGCACATCTGGGGCCAAGGGGATACTTTATGTCCTGGGGCTaGAAGTGGAATTTGTGGACA +
Preference number: 4 (lower is better)
Translates to: SRTTELEAKLAHLGPRGYFMSWG*KWNLWT
Trigger: TGTCCACAAATTCCACTTTCAGCCCCAGGACATAAA...GTATCCCCTTGGCCCCAGATGTGCCAGCTTGGCCTCCAGTTCTGTGGTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp ACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGGGCTAATAAGGAGGGAGGTTTCCCAAAAATaGACGTTCCTCGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TSDEATFPGLLEKGLIRREVSQK*TFLGLL
Trigger: GAGAAGGCCGAGGAACGTGCATTTTTGGGAAACCTC...CCTCCTTATTAGCCCCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTCAGCTGAGCAGGGAATaGGTAGCAGCAGCAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWAQLSRE*VAAAAL
Trigger: GAGAGCTGCTGCTGCTACCCATTCCCTGCTCAGCTG...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTGTTCAGAGATGGCCTTaGCAGCACAGTGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWAVQRWP*QHSGVA
Trigger: AGCCACCCCACTGTGCTGCCAAGGCCATCTCTGAAC...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTCAGCAGCTACTAGAGTaGGGACGAGCTGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIQQLLE*GRAGPS
Trigger: ACTGGGCCCAGCTCGTCCCCACTCTAGTAGCTGCTG...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTAGGAAGGTGTCTCTCTaGGGACCCCTTCTCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIRKVSL*GPLLFR
Trigger: GCGGAAGAGAAGGGGTCCTCAGAGAGACACCTTCCT...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR GCA 90 bp TGGGCAGTCTTCCATTTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGATGCAGGAGTGTGTTCTaGTCGCTCTCTCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: WAVFHFRVNLASTAGTRRCRSVF*SLSLLM
Trigger: CATCAGGAGAGAGAGCGAGCAGAACACACTCCTGCA...TCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAAATGGAAGACTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTACGGCCTTGAGCAACTaGCTGATGATCAAGGACGGG +
Preference number: 4 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSTALSN*LMIKDG
Trigger: CCCGTCCTTGATCATCAGCCAGTTGCTCAAGGCCGT...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTTTGAGGGGTGAAGCCTaGGTTCCTTCCTCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWALRGEA*VPSSEG
Trigger: TCCCTCTGAGGAAGGAACCCAGGCTTCACCCCTCAA...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TGGGCAGTCTTCCATTTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGACAGACATTTCTCTTaGGCTCACGAGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: WAVFHFRVNLASTAGTRRDRHFS*AHERLD
Trigger: GTCCAGCCTCTCGTGAGCCCAAGAGAAATGTCTGTC...TCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAAATGGAAGACTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTAACTTTGACAGCACATaGCCGGGTCACCCACCAAGG +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGINFDST*PGHPPR
Trigger: CCTTGGTGGGTGACCCGGTCATGTGCTGTCAAAGTT...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTAGACTCAAGAGGGGCTaGTTCAGTCATGGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWARLKRG*FSHGPE
Trigger: CTCTGGACCATGACTGAACCAGCCCCTCTTGAGTCT...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTACGATGGCCACCATGTaGCAGCCAAGGAAGATGAGA +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGITMATM*QPRKMR
Trigger: TCTCATCTTCCTTGGCTGCCACATGGTGGCCATCGT...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTCGGTGTGAAGCTTTCTaGTTGCTGAAGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIRCEAF*LLKTWV
Trigger: GACCCAGGTCTTCAGCAACCAGAAAGCTTCACACCG...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTATTGCACTGTGGACTTaGATGTGTGGCGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIIALWT*MCGVGG
Trigger: GCCACCAACGCCACACATCCAAGTCCACAGTGCAAT...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp TGGGCAGTCTTCCATTTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAAGATGCCTTGGTCTGTaGCTAAGAATTGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: WAVFHFRVNLASTAGTRRRCLGL*LRIALW
Trigger: CCACAGTGCAATTCTTAGCCACAGACCAAGGCATCT...TCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAAATGGAAGACTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CCA 90 bp CTGTGGACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTGGGCTGGAGATAATTTaGGAGGAGGTAAGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LWTWMCGVGGSRIDRHFSGLEII*EEVSPQ
Trigger: TTGGGGACTTACCTCCTCCCAAATTATCTCCAGCCC...AGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGTCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR TCA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTTATTTTTCCAGCGTGTaGGCTAATGAACTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVLPCSGGSLCPGAESGIYFSSV*ANELAE
Trigger: CTCAGCTAGTTCATTAGCTCACACGCTGGAAAAATA...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 90 bp GCAGAGGGCCCAGGTGAGGGCGCACACACAGGTGGTCAGGTGGCGTaGGCGGCGGCACGAGTACCAGGCTGGGAAGAGGGCGGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: AEGPGEGAHTGGQVA*AAARVPGWEEGGQA
Trigger: TGCCTGGCCGCCCTCTTCCCAGCCTGGTACTCGTGCCGCCGCCCACGCCACCTGACCACCTGTGTGTGCGCCCTCACCTGGGCCCTCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 90 bp AGAGCCAGCAGCACCGCTGCCACCAGCCACAGCGTCCGGCACAAGTaGCGGCTGGGCTCCCCGAAGAACTGGGTGCAGGCGCCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RASSTAATSHSVRHK*RLGSPKNWVQAPLS
Trigger: GCTCAGCGGCGCCTGCACCCAGTTCTTCGGGGAGCCCAGCCGCCACTTGTGCCGGACGCTGTGGCTGGTGGCAGCGGTGCTGCTGGCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS GCA 90 bp TCTCCTGATGCCCCGTTTGGGGCAGAGGACTGGCCGAGCCCTGCCTaGTCTGACCCTGGGCCTTGGATCTATCCTGGCCGCGGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: SPDAPFGAEDWPSPA*SDPGPWIYPGRGRG
Trigger: CCCTCGGCCGCGGCCAGGATAGATCCAAGGCCCAGGGTCAGAGCAGGCAGGGCTCGGCCAGTCCTCTGCCCCAAACGGGGCATCAGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp GGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTGCTCCCCAAGTCACCCTCTaGCCTCACGGGGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GSSPWGSQSQGIPGPRPAPQVTL*PHGGCS
Trigger: GCTGCAGCCCCCGTGAGGCAAGAGGGTGACTTGGGG...AGCAGGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp GCCTGGACCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTGTCCCTGGTGGGGCCTaGTGGCTCTGGGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: AWTCPSPGVWPCFLAFRGVPGGA*WLWGQK
Trigger: CTTCTGCCCCCAGAGCCACAAGGCCCCACCAGGGAC...ACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp GTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGGGTGCTGACCAGGGATCTACTGACCGAGGAGCTTaGCCTGCGACCCAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: VGWEGPGAAGFQGADQGSTDRGA*PATQVE
Trigger: CTCCACCTGGGTCGCAGGCAAAGCTCCTCGGTCAGT...AGATCCCTGGTCAGCACCCTGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 90 bp GGATCTATCCTGGCCGCGGCCGAGGGCTCCAGTCCCCAGAGCCTCTaGGCGGCTCCTGTTCAGTGTCCACCAGCTCCTCCGAGTCACATG +
Preference number: 5 (lower is better)
Translates to: GSILAAAEGSSPQSL*AAPVQCPPAPPSHM
Trigger: CATGTGACTCGGAGGAGCTGGTGGACACTGAACAGGAGCCGCCCAGAGGCTCTGGGGACTGGAGCCCTCGGCCGCGGCCAGGATAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 90 bp CCCTCGGTGAGGGACAGGATGATGAGGTTGAAGGCCACATCCTCCTaGGCGCCGTTGGCGGCCCCCACGTGCTGTCCAGCTTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: PSVRDRMMRLKATSS*APLAAPTCCPASLG
Trigger: GCCCAGAGAAGCTGGACAGCACGTGGGGGCCGCCAACGGCGCCCAGGAGGATGTGGCCTTCAACCTCATCATCCTGTCCCTCACCGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp TGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGGGCCGGCTCCTGATGCCCCGTTaGGGGCAGAGGACTGGCCGA +
Preference number: 5 (lower is better)
Translates to: WSGTCSGQRRVNCLGWGRLLMPR*GQRTGR
Trigger: TCGGCCAGTCCTCTGCCCCAAACGGGGCATCAGGAG...CCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS GCA 90 bp GTTGCCAGGCTGGTCTGCACGAAGCCCGGGAAGTCCAGCCGGCCTTaGAGCAAGTCGGGGACGATGGCCACCATGTGGCAGCCAAGGAAG +
Preference number: 5 (lower is better)
Translates to: VARLVCTKPGKSSRP*SKSGTMATMWQPRK
Trigger: CTTCCTTGGCTGCCACATGGTGGCCATCGTCCCCGACTTGCTGCAAGGCCGGCTGGACTTCCCGGGCTTCGTGCAGACCAGCCTGGCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS GCA 90 bp CGCCAGGAGACTCAGGCCCACGATGTAGCAGAAGAAGCGCAGCGTTaGCAGGCTGGTCTGCACGAAGCCCGGGAAGTCCAGCCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: RQETQAHDVAEEAQR*QAGLHEAREVQPAL
Trigger: CAAGGCCGGCTGGACTTCCCGGGCTTCGTGCAGACCAGCCTGGCAACGCTGCGCTTCTTCTGCTACATCGTGGGCCTGAGTCTCCTGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 90 bp AAGTCCAGCCGGCCTTGCAGCAAGTCGGGGACGATGGCCACCATGTaGCAGCCAAGGAAGATGAGATCCGCGCAGGCCACGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: KSSRPCSKSGTMATM*QPRKMRSAQATSRR
Trigger: CCTCCTGGACGTGGCCTGCGCGGATCTCATCTTCCTTGGCTGCCACATGGTGGCCATCGTCCCCGACTTGCTGCAAGGCCGGCTGGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp GCCTGGACCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTTGTTCAGAGATGGCCTaGGCAGCACAGTGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: AWTCPSPGVWPCFLAFRGCSEMA*AAQWGG
Trigger: GCCACCCCACTGTGCTGCCAAGGCCATCTCTGAACA...ACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGGTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 90 bp GACTCAGGCCCACGATGTAGCAGAAGAAGCGCAGCGTTGCCAGGCTaGTCTGCACGAAGCCCGGGAAGTCCAGCCGGCCTTGCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: DSGPRCSRRSAALPG*SARSPGSPAGLAAS
Trigger: ACTTGCTGCAAGGCCGGCTGGACTTCCCGGGCTTCGTGCAGACCAGCCTGGCAACGCTGCGCTTCTTCTGCTACATCGTGGGCCTGAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp TGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGGGCCGGCTGAGGTGCACGGCCTaGAGCAACTGGCTGATGATC +
Preference number: 5 (lower is better)
Translates to: WSGTCSGQRRVNCLGWGRLRCTA*SNWLMI
Trigger: GATCATCAGCCAGTTGCTCAAGGCCGTGCACCTCAG...CCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp GGGTCCAGCCCCTGGGGCTCCCAGTCTCAAGGGATACCTGGACCCAGGCCTGCTCGACAGACATTTCTCTaGGGCTCACGAGAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: GSSPWGSQSQGIPGPRPARQTFL*GSREAG
Trigger: TCCAGCCTCTCGTGAGCCCAAGAGAAATGTCTGTCG...AGCAGGCCTGGGTCCAGGTATCCCTTGAGACTGGGAGCCCCAGGGGCTGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp TGGAGCGGGACTTGCTCAGGACAGAGGCGGGTGAACTGCCTTGGATGGGGCCGGAAGCTCGGAAACCTGTaGAGGGGTGAAGCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: WSGTCSGQRRVNCLGWGRKLGNL*RGEAWV
Trigger: AACCCAGGCTTCACCCCTCAACAGGTTTCCGAGCTT...CCGGCCCCATCCAAGGCAGTTCACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp CCTGAGGTGAACGCACTGTGTGGGCTGGGAGGGGCCCGGTGCAGCCGGATTCCAGCTGAGGAACTGAAGTaGCTAATCACGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PEVNALCGLGGARCSRIPAEELK*LITSWR
Trigger: CCTCCAGGACGTGATTAGCAACTTCAGTTCCTCAGC...TGGAATCCGGCTGCACCGGGCCCCTCCCAGCCCACACAGTGCGTTCACCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp CCTGCCCCTCACCTGGCGTCTGGCCTTGCTTCCTTGCTTTCCGGGGTCTCCTCAGACAGGATGATGAGGTaGAAGGCCACATCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PAPHLASGLASLLSGVSSDRMMR*KATSSW
Trigger: CCAGGAGGATGTGGCCTTCAACCTCATCATCCTGTC...TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGTGAGGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTGAAGTCCAGCCGGCCTaGCAGCAAGTCGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSEVQPA*QQVGDD
Trigger: ATCGTCCCCGACTTGCTGCAAGGCCGGCTGGACTTC...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 90 bp TCAGTGTCCACCAGCTCCTCCGAGTCACATGGCATCCAGCTGGAATaGGGCCGGTCAGGAAGGTGTCTCTCTGAGGACCCCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SVSTSSSESHGIQLE*GRSGRCLSEDPFSS
Trigger: GGAAGAGAAGGGGTCCTCAGAGAGACACCTTCCTGACCGGCCCCATTCCAGCTGGATGCCATGTGACTCGGAGGAGCTGGTGGACACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 90 bp CCTGTTCAGTGTCCACCAGCTCCTCCGAGTCACATGGCATCCAGCTaGAATGGGGCCGGTCAGGAAGGTGTCTCTCTGAGGACCCCTTCT +
Preference number: 5 (lower is better)
Translates to: PVQCPPAPPSHMASS*NGAGQEGVSLRTPS
Trigger: AGAAGGGGTCCTCAGAGAGACACCTTCCTGACCGGCCCCATTCCAGCTGGATGCCATGTGACTCGGAGGAGCTGGTGGACACTGAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTTCTGGCCTTGCTTCCTaGCTTTCCGGGGTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSSGLAS*LSGVSS
Trigger: TGAGGAGACCCCGGAAAGCAAGGAAGCAAGGCCAGA...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp TTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCTGAGGGGATGGTTCCTCTGGAGCGGGACTaGCTCAGGACAGAGGCGGGT +
Preference number: 5 (lower is better)
Translates to: FRVNLASTAGTRRAEGMVPLERD*LRTEAG
Trigger: ACCCGCCTCTGTCCTGAGCAAGTCCCGCTCCAGAGG...AACCATCCCCTCAGCTCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp CAGTTTCCATGGAGACCTCAGATGAGGCCACATTTCCCGGACTCCTCGAGAAGGAGCTCAGCCTCCAGTTaGGAGGCCAGCCCACATGGT +
Preference number: 5 (lower is better)
Translates to: QFPWRPQMRPHFPDSSRRSSASS*EASPHG
Trigger: ACCATGTGGGCTGGCCTCCAAACTGGAGGCTGAGCT...CCTTCTCGAGGAGTCCGGGAAATGTGGCCTCATCTGAGGTCTCCATGGAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp TTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCTGAGGGGATGGTTAGAAGAAGCGCAGCGTaGCCAGGCTGGTCTGCACGA +
Preference number: 5 (lower is better)
Translates to: FRVNLASTAGTRRAEGMVRRSAA*PGWSAR
Trigger: TCGTGCAGACCAGCCTGGCAACGCTGCGCTTCTTCT...AACCATCCCCTCAGCTCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTCTTGGATGTGTGGCGTaGGTGGCAGTAGAATCGACA +
Preference number: 5 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSLGCVA*VAVEST
Trigger: TGTCGATTCTACTGCCACCAACGCCACACATCCAAG...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp GTGCTGACCAGGGATCTGCGACTCACACCCAGACTCAAGAGGGGCTGGTTCAGTAGTCACCTTCTGGCTTaGCAGCTTTCCTGTGGTCCT +
Preference number: 5 (lower is better)
Translates to: VLTRDLRLTPRLKRGWFSSHLLA*QLSCGP
Trigger: AGGACCACAGGAAAGCTGCAAAGCCAGAAGGTGACT...ACTGAACCAGCCCCTCTTGAGTCTGGGTGTGAGTCGCAGATCCCTGGTCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp TTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCTGAGGGGATGGTTCCAAGGGTCACAACTTaGACAGCACATGACCGGGTC +
Preference number: 5 (lower is better)
Translates to: FRVNLASTAGTRRAEGMVPRVTT*TAHDRV
Trigger: GACCCGGTCATGTGCTGTCAAAGTTGTGACCCTTGG...AACCATCCCCTCAGCTCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTACCTGGCGTCTGGCCTaGCTTCCTTGCTTTCCGGGG +
Preference number: 5 (lower is better)
Translates to: LVLPCSGGSLCPGAESGITWRLA*LPCFPG
Trigger: CCCCGGAAAGCAAGGAAGCAAGGCCAGACGCCAGGT...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp TTTAGGGTCAATTTAGCTTCCACAGCGGGCACAAGGCGAGCTGAGGGGATGGTTTGTGAAGCTTTCTGGTaGCTGAAGACCTGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: FRVNLASTAGTRRAEGMVCEAFW*LKTWVL
Trigger: CAGGACCCAGGTCTTCAGCAACCAGAAAGCTTCACA...AACCATCCCCTCAGCTCGCCTTGTGCCCGCTGTGGAAGCTAAATTGACCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTCCAGTGCGTGAACCGTaGGGGAGGTTTCCCAAAAAT +
Preference number: 5 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWAPVREP*GRFPKN
Trigger: ATTTTTGGGAAACCTCCCCAACGGTTCACGCACTGG...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp ACTTGGATGTGTGGCGTTGGTGGCAGTAGAATCGACAGACATTTCTCTTGGGCTTGGGCTGGAGATAATTaGGGAGGAGGTAAGTCCCCA +
Preference number: 5 (lower is better)
Translates to: TWMCGVGGSRIDRHFSWAWAGDN*GGGKSP
Trigger: TGGGGACTTACCTCCTCCCAAATTATCTCCAGCCCA...AGCCCAAGAGAAATGTCTGTCGATTCTACTGCCACCAACGCCACACATCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS-3UTR CAA 90 bp CTGGTTCTTCCTTGTTCTGGGGGAAGTTTATGTCCTGGGGCTGAAAGTGGAATTAATTGCACTGTGGACTaGGATGTGTGGCGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: LVLPCSGGSLCPGAESGINCTVD*DVWRWW
Trigger: CCACCAACGCCACACATCCAAGTCCACAGTGCAATT...AATTCCACTTTCAGCCCCAGGACATAAACTTCCCCCAGAACAAGGAAGAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS GCA 72 bp GCCACATCCTCCTGGGCGCCGTTGGCGGCCCCCACGTaGTGTCCAGCTTCTCTGGGCTCCATCATGGGGCGG +
Preference number: 6 (lower is better)
Translates to: ATSSWAPLAAPT*CPASLGSIMGR
Trigger: CCGCCCCATGATGGAGCCCAGAGAAGCTGGACAGCACGTGGGGGCCGCCAACGGCGCCCAGGAGGATGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 72 bp AGCACCGCTGCCACCAGCCACAGCGTCCGGCACAAGTaGCGGCTGGGCTCCCCGAAGAACTGGGTGCAGGCG +
Preference number: 6 (lower is better)
Translates to: STAATSHSVRHK*RLGSPKNWVQA
Trigger: CGCCTGCACCCAGTTCTTCGGGGAGCCCAGCCGCCACTTGTGCCGGACGCTGTGGCTGGTGGCAGCGGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CAA 90 bp AGCCCACCGAGGCCGAGCCCCTCGGTGAGGGACAGGATGATGAGGTaGAAGGCCACATCCTCCTGGGCGCCGTTGGCGGCCCCCACGTGC +
Preference number: 6 (lower is better)
Translates to: SPPRPSPSVRDRMMR*KATSSWAPLAAPTC
Trigger: GCACGTGGGGGCCGCCAACGGCGCCCAGGAGGATGTGGCCTTCAACCTCATCATCCTGTCCCTCACCGAGGGGCTCGGCCTCGGTGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 72 bp GCTCTCTCTCCTGATGCCCCGTTTGGGGCAGAGGACTaGCCGAGCCCTGCCTGCTCTGACCCTGGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: ALSPDAPFGAED*PSPACSDPGPW
Trigger: CCAAGGCCCAGGGTCAGAGCAGGCAGGGCTCGGCCAGTCCTCTGCCCCAAACGGGGCATCAGGAGAGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CAA 72 bp AGGCCGAGCCCCTCGGTGAGGGACAGGATGATGAGGTaGAAGGCCACATCCTCCTGGGCGCCGTTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: RPSPSVRDRMMR*KATSSWAPLAA
Trigger: GGCCGCCAACGGCGCCCAGGAGGATGTGGCCTTCAACCTCATCATCCTGTCCCTCACCGAGGGGCTCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS GCA 72 bp CTGGTCTGCACGAAGCCCGGGAAGTCCAGCCGGCCTTaGAGCAAGTCGGGGACGATGGCCACCATGTGGCAG +
Preference number: 6 (lower is better)
Translates to: LVCTKPGKSSRP*SKSGTMATMWQ
Trigger: CTGCCACATGGTGGCCATCGTCCCCGACTTGCTGCAAGGCCGGCTGGACTTCCCGGGCTTCGTGCAGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CAA 72 bp GCTGGTCTGCACGAAGCCCGGGAAGTCCAGCCGGCCTaGCAGCAAGTCGGGGACGATGGCCACCATGTGGCA +
Preference number: 6 (lower is better)
Translates to: AGLHEAREVQPA*QQVGDDGHHVA
Trigger: TGCCACATGGTGGCCATCGTCCCCGACTTGCTGCAAGGCCGGCTGGACTTCCCGGGCTTCGTGCAGACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CAA 90 bp CGTTGCCAGGCTGGTCTGCACGAAGCCCGGGAAGTCCAGCCGGCCTaGCAGCAAGTCGGGGACGATGGCCACCATGTGGCAGCCAAGGAA +
Preference number: 6 (lower is better)
Translates to: RCQAGLHEAREVQPA*QQVGDDGHHVAAKE
Trigger: TTCCTTGGCTGCCACATGGTGGCCATCGTCCCCGACTTGCTGCAAGGCCGGCTGGACTTCCCGGGCTTCGTGCAGACCAGCCTGGCAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CAA 90 bp CCGCCAGGAGACTCAGGCCCACGATGTAGCAGAAGAAGCGCAGCGTaGCCAGGCTGGTCTGCACGAAGCCCGGGAAGTCCAGCCGGCCTT +
Preference number: 6 (lower is better)
Translates to: PPGDSGPRCSRRSAA*PGWSARSPGSPAGL
Trigger: AAGGCCGGCTGGACTTCCCGGGCTTCGTGCAGACCAGCCTGGCAACGCTGCGCTTCTTCTGCTACATCGTGGGCCTGAGTCTCCTGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 72 bp AGGGACAGGATGATGAGGTTGAAGGCCACATCCTCCTaGGCGCCGTTGGCGGCCCCCACGTGCTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: RDRMMRLKATSS*APLAAPTCCPA
Trigger: AGCTGGACAGCACGTGGGGGCCGCCAACGGCGCCCAGGAGGATGTGGCCTTCAACCTCATCATCCTGTCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 72 bp CGGCCTTGCAGCAAGTCGGGGACGATGGCCACCATGTaGCAGCCAAGGAAGATGAGATCCGCGCAGGCCACG +
Preference number: 6 (lower is better)
Translates to: RPCSKSGTMATM*QPRKMRSAQAT
Trigger: CGTGGCCTGCGCGGATCTCATCTTCCTTGGCTGCCACATGGTGGCCATCGTCCCCGACTTGCTGCAAGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 72 bp CCACGATGTAGCAGAAGAAGCGCAGCGTTGCCAGGCTaGTCTGCACGAAGCCCGGGAAGTCCAGCCGGCCTT +
Preference number: 6 (lower is better)
Translates to: PRCSRRSAALPG*SARSPGSPAGL
Trigger: AAGGCCGGCTGGACTTCCCGGGCTTCGTGCAGACCAGCCTGGCAACGCTGCGCTTCTTCTGCTACATCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CAA 90 bp AGGGACAGGATGATGAGGTTGAAGGCCACATCCTCCTGGGCGCCGTaGGCGGCCCCCACGTGCTGTCCAGCTTCTCTGGGCTCCATCATG +
Preference number: 6 (lower is better)
Translates to: RDRMMRLKATSSWAP*AAPTCCPASLGSIM
Trigger: CATGATGGAGCCCAGAGAAGCTGGACAGCACGTGGGGGCCGCCAACGGCGCCCAGGAGGATGTGGCCTTCAACCTCATCATCCTGTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS GCA 72 bp ACTCAGGCCCACGATGTAGCAGAAGAAGCGCAGCGTTaGCAGGCTGGTCTGCACGAAGCCCGGGAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: TQAHDVAEEAQR*QAGLHEAREVQ
Trigger: CTGGACTTCCCGGGCTTCGTGCAGACCAGCCTGGCAACGCTGCGCTTCTTCTGCTACATCGTGGGCCTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 72 bp ACCAGCTCCTCCGAGTCACATGGCATCCAGCTGGAATaGGGCCGGTCAGGAAGGTGTCTCTCTGAGGACCCC +
Preference number: 6 (lower is better)
Translates to: TSSSESHGIQLE*GRSGRCLSEDP
Trigger: GGGGTCCTCAGAGAGACACCTTCCTGACCGGCCCCATTCCAGCTGGATGCCATGTGACTCGGAGGAGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CAA 72 bp GACTCAGGCCCACGATGTAGCAGAAGAAGCGCAGCGTaGCCAGGCTGGTCTGCACGAAGCCCGGGAAGTCCA +
Preference number: 6 (lower is better)
Translates to: DSGPRCSRRSAA*PGWSARSPGSP
Trigger: TGGACTTCCCGGGCTTCGTGCAGACCAGCCTGGCAACGCTGCGCTTCTTCTGCTACATCGTGGGCCTGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389832.7
CDS CCA 72 bp CTCCTGTTCAGTGTCCACCAGCTCCTCCGAGTCACATaGCATCCAGCTGGAATGGGGCCGGTCAGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: LLFSVHQLLRVT*HPAGMGPVRKV
Trigger: CACCTTCCTGACCGGCCCCATTCCAGCTGGATGCCATGTGACTCGGAGGAGCTGGTGGACACTGAACAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389832.7