Pregenerated sensors for MRFAP1L1 (Homo sapiens)
Ensembl gene IDs: ENSG00000178988Ensembl transcript IDs: ENST00000320848.7, ENST00000500563.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCTTGTCATAAAAGGTCAGCTATGTTGTCTAAATCAACTCACCTaGCAGGTTACACAATATATATCAGACAATGTGCCACAAAACATA | + |
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Preference number: 1 (lower is better) Translates to: CLVIKGQLCCLNQLT*QVTQYISDNVPQNI Trigger: TATGTTTTGTGGCACATTGTCTGATATATATTGTGTAACCTGTCAGGTGAGTTGATTTAGACAACATAGCTGACCTTTTATGACAAGGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| 3UTR-3UTR TCA 90 bp | CCTTTCTCCGGCCTCTTAAAGCTCTCTGTAGACTGTCTCTTCCATGCCATTCTCTTCATCCTTACCAGTTaGCTACAGTCCTCAGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PFSGLLKLSVDCLFHAILFILTS*LQSSAV Trigger: CACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAA...GAGAATGGCATGGAAGAGACAGTCTACAGAGAGCTTTAAGAGGCCGGAGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| 3UTR-3UTR TCA 90 bp | AATACGAGGCCATGCCCAACATTTCAAAAACACAGCGAAGTAACAAGAATAAACGCCCCATTTCTCTTCTaGGAGTATTTCTTTGACAAA | + |
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Preference number: 2 (lower is better) Translates to: NTRPCPTFQKHSEVTRINAPFLF*EYFFDK Trigger: TTTGTCAAAGAAATACTCTCAGAAGAGAAATGGGGC...GTTTATTCTTGTTACTTCGCTGTGTTTTTGAAATGTTGGGCATGGCCTCGTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| 3UTR-3UTR TCA 90 bp | ACACAGCGAAGTAACAAGAATAAACGTGACCACAAAAACAACTTAATTAAGCCCACAAAACAGAGAAAATaGCAAGCTGTTTCAGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: TQRSNKNKRDHKNNLIKPTKQRK*QAVSVS Trigger: GGAAACTGAAACAGCTTGTCATTTTCTCTGTTTTGT...GGGCTTAATTAAGTTGTTTTTGTGGTCACGTTTATTCTTGTTACTTCGCTGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| 3UTR TCA 72 bp | TCAGTTTCCTCAAGGTGTCAGTTCATCCTTACCAGTTaGCTACAGTCCTCAGCTGTGAACCACCGATCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SVSSRCQFILTS*LQSSAVNHRSP Trigger: AGGAGATCGGTGGTTCACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAACTGACACCTTGAGGAAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| 3UTR-3UTR CAA 90 bp | GACCTCCAATCTGACAGGTCTACTACCCTGATGAACTGGAAGAGACTTTCCAGGATTGCACCTCTAAAGTaGGAAGATTCTGATCCCACG | + |
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Preference number: 3 (lower is better) Translates to: DLQSDRSTTLMNWKRLSRIAPLK*EDSDPT Trigger: CGTGGGATCAGAATCTTCCAACTTTAGAGGTGCAAT...CCTGGAAAGTCTCTTCCAGTTCATCAGGGTAGTAGACCTGTCAGATTGGAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| 3UTR-3UTR CAA 90 bp | AATACGAGGCCATGCCCAACATTTCAAAAACACAGCGAAGTAACAAGAATAAACGTTCATCCTTACCAGTaGACTACAGTCCTCAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: NTRPCPTFQKHSEVTRINVHPYQ*TTVLSC Trigger: ACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAAC...GTTTATTCTTGTTACTTCGCTGTGTTTTTGAAATGTTGGGCATGGCCTCGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR TCA 90 bp | GTTCATCCTTACCAGTTGACTACAGTCCTCAGCTGTGAACCACCGATCTCCTCCGTTACTGCTGGAGGCTaGGCGACCCACACGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: VHPYQLTTVLSCEPPISSVTAGG*ATHTLC Trigger: ACAAAGCGTGTGGGTCGCTCAGCCTCCAGCAGTAAC...GGAGGAGATCGGTGGTTCACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR TCA 90 bp | GTTCATCCTTACCAGTTGACTACAGTCCTCAGCTGTGAACCACCGATCTCCTCCTACAGTCCTCAGCTGTaGACCACCGATCTCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VHPYQLTTVLSCEPPISSYSPQL*TTDLLL Trigger: AAGGAGGAGATCGGTGGTTCACAGCTGAGGACTGTA...GGAGGAGATCGGTGGTTCACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR GCA 90 bp | CACCAGGCTCAACCAAGTAGCGTAGTGTCTTCCATTGCACCTCTAAAGTTGGAAGAGATCAGCAGTTACTaGTGGAGGCTGAGCGACCCA | + |
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Preference number: 4 (lower is better) Translates to: HQAQPSSVVSSIAPLKLEEISSY*WRLSDP Trigger: TGGGTCGCTCAGCCTCCAGCAGTAACTGCTGATCTC...TTCCAACTTTAGAGGTGCAATGGAAGACACTACGCTACTTGGTTGAGCCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR CCA 90 bp | CACCAGGCTCAACCAAGTAGCGTAGTGTCTTCCATTGCACCTCTAAAGTTGGAAATCAGCAGTTACTGCTaGAGGCTGAGCGACCCACAC | + |
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Preference number: 4 (lower is better) Translates to: HQAQPSSVVSSIAPLKLEISSYC*RLSDPH Trigger: GTGTGGGTCGCTCAGCCTCCAGCAGTAACTGCTGAT...TTCCAACTTTAGAGGTGCAATGGAAGACACTACGCTACTTGGTTGAGCCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR TCA 90 bp | GTTCATCCTTACCAGTTGACTACAGTCCTCAGCTGTGAACCACCGATCTCCTCCTTCATCCTTACCAGTTaGCTACAGTCCTCAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VHPYQLTTVLSCEPPISSFILTS*LQSSAV Trigger: CACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAA...GGAGGAGATCGGTGGTTCACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR GCA 90 bp | AATACGAGGCCATGCCCAACATTTCAAAAACACAGCGAAGTAACAAGAATAAACGGCCGCATCTCCTCCTaGCGCTTCCTCAGTACCGCA | + |
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Preference number: 4 (lower is better) Translates to: NTRPCPTFQKHSEVTRINGRISS*RFLSTA Trigger: TGCGGTACTGAGGAAGCGGCAGGAGGAGATGCGGCC...GTTTATTCTTGTTACTTCGCTGTGTTTTTGAAATGTTGGGCATGGCCTCGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| 3UTR CAA 72 bp | TTCAGTTTCCTCAAGGTGTCAGTTCATCCTTACCAGTaGACTACAGTCCTCAGCTGTGAACCACCGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSFLKVSVHPYQ*TTVLSCEPPIS Trigger: GGAGATCGGTGGTTCACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAACTGACACCTTGAGGAAACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR CCA 90 bp | CAGTTTCCTCAAGGTGTCAGTTCATCCTTACCAGTTGACTACAGTCCTCAGCTGGAACCCTCCAAGAACTaGAGATCAGCAGTTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: QFPQGVSSSLPVDYSPQLEPSKN*RSAVTA Trigger: AGCAGTAACTGCTGATCTCCAGTTCTTGGAGGGTTC...CAGCTGAGGACTGTAGTCAACTGGTAAGGATGAACTGACACCTTGAGGAAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR GCA 90 bp | ATGACAAGCTGTTTCAGTTTCCTCAAGGTGTCAGTTCATCCTTACCAGTTGACTTTCGCTTCACAACTCTaGGGGAAGAATCGCCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: MTSCFSFLKVSVHPYQLTFASQL*GKNRRG Trigger: TCCACGGCGATTCTTCCCGCAGAGTTGTGAAGCGAA...AGTCAACTGGTAAGGATGAACTGACACCTTGAGGAAACTGAAACAGCTTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR TCA 90 bp | CCTTTCTCCGGCCTCTTAAAGCTCTCTGTAGACTGTCTCTTCCATGCCATTCTCGCCCCATTTCTCTTCTaGGAGTATTTCTTTGACAAA | + |
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Preference number: 4 (lower is better) Translates to: PFSGLLKLSVDCLFHAILAPFLF*EYFFDK Trigger: TTTGTCAAAGAAATACTCTCAGAAGAGAAATGGGGC...GAGAATGGCATGGAAGAGACAGTCTACAGAGAGCTTTAAGAGGCCGGAGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR GCA 90 bp | TCTTCCATGCCATTCTCTGATGCCCCTATAATGTGTGAGGGTATTACAATAGTCAGACTGTCTCTTCCATaGCATTCTCTGATGCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: SSMPFSDAPIMCEGITIVRLSLP*HSLMPL Trigger: TAGGGGCATCAGAGAATGGCATGGAAGAGACAGTCT...GACTATTGTAATACCCTCACACATTATAGGGGCATCAGAGAATGGCATGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR CCA 90 bp | AATACGAGGCCATGCCCAACATTTCAAAAACACAGCGAAGTAACAAGAATAAACCGGGAAGAATCGCCGTaGATGCACACAAATAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: NTRPCPTFQKHSEVTRINREESP*MHTNKR Trigger: CCGCTTATTTGTGTGCATCCACGGCGATTCTTCCCG...GTTTATTCTTGTTACTTCGCTGTGTTTTTGAAATGTTGGGCATGGCCTCGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR TCA 90 bp | CAGTTTCCTCAAGGTGTCAGTTCATCCTTACCAGTTGACTACAGTCCTCAGCTGACAAAACAGAGAAAATaGCAAGCTGTTTCAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: QFPQGVSSSLPVDYSPQLTKQRK*QAVSVS Trigger: GGAAACTGAAACAGCTTGTCATTTTCTCTGTTTTGT...CAGCTGAGGACTGTAGTCAACTGGTAAGGATGAACTGACACCTTGAGGAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR TCA 90 bp | ATGACAAGCTGTTTCAGTTTCCTCAAGGTGTCAGTTCATCCTTACCAGTTGACTAAAGTTGGAAGATTCTaGTCCCACGTCTTGACGTGT | + |
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Preference number: 4 (lower is better) Translates to: MTSCFSFLKVSVHPYQLTKVGRF*SHVLTC Trigger: ACACGTCAAGACGTGGGATCAGAATCTTCCAACTTT...AGTCAACTGGTAAGGATGAACTGACACCTTGAGGAAACTGAAACAGCTTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR GCA 90 bp | ACACAGCGAAGTAACAAGAATAAACGTGACCACAAAAACAACTTAATTAAGCCCAAGAATCGCCGTGGATaGACACAAATAAGCGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: TQRSNKNKRDHKNNLIKPKNRRG*TQISGL Trigger: TAGGCCGCTTATTTGTGTGCATCCACGGCGATTCTT...GGGCTTAATTAAGTTGTTTTTGTGGTCACGTTTATTCTTGTTACTTCGCTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR TCA 90 bp | GACCACAAAAACAACTTAATTAAGCCCCATTTCTCTTCTGAGAGTATTTCTTTGTGCCCCTATAATGTGTaGGGGTATTACAATAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: DHKNNLIKPHFSSESISLCPYNV*GYYNSP Trigger: GGGACTATTGTAATACCCTCACACATTATAGGGGCA...CAAAGAAATACTCTCAGAAGAGAAATGGGGCTTAATTAAGTTGTTTTTGTGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR GCA 90 bp | ACACAGCGAAGTAACAAGAATAAACGTGACCACAAAAACAACTTAATTAAGCCCAGTCCCTATTCAAACTaGCTTGTCATAAAAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TQRSNKNKRDHKNNLIKPSPYSN*LVIKGQ Trigger: CTGACCTTTTATGACAAGGCAGTTTGAATAGGGACT...GGGCTTAATTAAGTTGTTTTTGTGGTCACGTTTATTCTTGTTACTTCGCTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR GCA 90 bp | GACCACAAAAACAACTTAATTAAGCCCCATTTCTCTTCTGAGAGTATTTCTTTGCAAAATACGAGGCCATaGCCAACATTTCAAAAACAC | + |
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Preference number: 4 (lower is better) Translates to: DHKNNLIKPHFSSESISLQNTRP*PTFQKH Trigger: GTGTTTTTGAAATGTTGGGCATGGCCTCGTATTTTG...CAAAGAAATACTCTCAGAAGAGAAATGGGGCTTAATTAAGTTGTTTTTGTGGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| 3UTR CAA 72 bp | TTTGTTTTTCAAGGCAAATTAACACTTATTATACTTTaGACTTTGACCTCCAATCTGACAGGTCTACTACCC | + |
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Preference number: 4 (lower is better) Translates to: FVFQGKLTLIIL*TLTSNLTGLLP Trigger: GGGTAGTAGACCTGTCAGATTGGAGGTCAAAGTCAAAAGTATAATAAGTGTTAATTTGCCTTGAAAAACAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS GCA 90 bp | GTTCTTCTCACCGGAACCCTCCAAGAACTGGAGATCAGCAGTTACTaGTGGAGGCTGAGCGACCCACACGCTTTGTCAATTGTACTCCCG | + |
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Preference number: 5 (lower is better) Translates to: VLLTGTLQELEISSY*WRLSDPHALSIVLP Trigger: CGGGAGTACAATTGACAAAGCGTGTGGGTCGCTCAGCCTCCAGCAGTAACTGCTGATCTCCAGTTCTTGGAGGGTTCCGGTGAGAAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320848.7 ENST00000500563.2 |
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| CDS CCA 90 bp | CTTCTCACCGGAACCCTCCAAGAACTGGAGATCAGCAGTTACTGCTaGAGGCTGAGCGACCCACACGCTTTGTCAATTGTACTCCCGAAT | + |
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Preference number: 5 (lower is better) Translates to: LLTGTLQELEISSYC*RLSDPHALSIVLPN Trigger: ATTCGGGAGTACAATTGACAAAGCGTGTGGGTCGCTCAGCCTCCAGCAGTAACTGCTGATCTCCAGTTCTTGGAGGGTTCCGGTGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320848.7 ENST00000500563.2 |
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| CDS TCA 90 bp | CCGGAACCCTCCAAGAACTGGAGATCAGCAGTTACTGCTGGAGGCTaGGCGACCCACACGCTTTGTCAATTGTACTCCCGAATTATCTTT | + |
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Preference number: 5 (lower is better) Translates to: PEPSKNWRSAVTAGG*ATHTLCQLYSRIIF Trigger: AAAGATAATTCGGGAGTACAATTGACAAAGCGTGTGGGTCGCTCAGCCTCCAGCAGTAACTGCTGATCTCCAGTTCTTGGAGGGTTCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320848.7 ENST00000500563.2 |
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| CDS-3UTR CAA 90 bp | GTTCATCCTTACCAGTTGACTACAGTCCTCAGCTGTGAACCACCGATCTCCTCCGTTCATCCTTACCAGTaGACTACAGTCCTCAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: VHPYQLTTVLSCEPPISSVHPYQ*TTVLSC Trigger: ACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAAC...GGAGGAGATCGGTGGTTCACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS GCA 90 bp | ATTTCAGGTAATGGCCTCTGGCTTTACTCTTTATTTCTCCTTCCCTaGGTTCTCAGCCTGCGTTCCACTGTGCTCTATGGCCTAGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: ISGNGLWLYSLFLLP*VLSLRSTVLYGLGL Trigger: AAGACCTAGGCCATAGAGCACAGTGGAACGCAGGCTGAGAACGCAGGGAAGGAGAAATAAAGAGTAAAGCCAGAGGCCATTACCTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500563.2 |
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| CDS-3UTR CAA 90 bp | CACCAGGCTCAACCAAGTAGCGTAGTGTCTTCCATTGCACCTCTAAAGTTGGAAAGCGACCCACACGCTTaGTCAATTGTACTCCCGAAT | + |
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Preference number: 5 (lower is better) Translates to: HQAQPSSVVSSIAPLKLESDPHA*SIVLPN Trigger: ATTCGGGAGTACAATTGACAAAGCGTGTGGGTCGCT...TTCCAACTTTAGAGGTGCAATGGAAGACACTACGCTACTTGGTTGAGCCTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS TCA 90 bp | CAAGCTGTTTCAGTTTCCTCAAGGTGTCAGTTCATCCTTACCAGTTaGCTACAGTCCTCAGCTGTGAACCACCGATCTCCTCCTTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: QAVSVSSRCQFILTS*LQSSAVNHRSPPSR Trigger: TCTTGAAGGAGGAGATCGGTGGTTCACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAACTGACACCTTGAGGAAACTGAAACAGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR CAA 90 bp | CACCAGGCTCAACCAAGTAGCGTAGTGTCTTCCATTGCACCTCTAAAGTTGGAACACACGCTTTGTCAATaGTACTCCCGAATTATCTTT | + |
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Preference number: 5 (lower is better) Translates to: HQAQPSSVVSSIAPLKLEHTLCQ*YSRIIF Trigger: AAAGATAATTCGGGAGTACAATTGACAAAGCGTGTG...TTCCAACTTTAGAGGTGCAATGGAAGACACTACGCTACTTGGTTGAGCCTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS CCA 90 bp | TCTTTGAGACACGGTCCTCTGACATACCTGTCTCATAGAACAATCTaGAAATTTCAGGTAATGGCCTCTGGCTTTACTCTTTATTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SLRHGPLTYLSHRTI*KFQVMASGFTLYFS Trigger: GGAGAAATAAAGAGTAAAGCCAGAGGCCATTACCTGAAATTTCCAGATTGTTCTATGAGACAGGTATGTCAGAGGACCGTGTCTCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500563.2 |
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| CDS-3UTR CAA 90 bp | ATGACAAGCTGTTTCAGTTTCCTCAAGGTGTCAGTTCATCCTTACCAGTTGACTAAAAGGTCAGCTATGTaGTCTAAATCAACTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: MTSCFSFLKVSVHPYQLTKRSAM*SKSTHL Trigger: CAGGTGAGTTGATTTAGACAACATAGCTGACCTTTT...AGTCAACTGGTAAGGATGAACTGACACCTTGAGGAAACTGAAACAGCTTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS-3UTR CAA 90 bp | ACACAGCGAAGTAACAAGAATAAACGTGACCACAAAAACAACTTAATTAAGCCCATTGCACCTCTAAAGTaGGAAGATTCTGATCCCACG | + |
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Preference number: 5 (lower is better) Translates to: TQRSNKNKRDHKNNLIKPIAPLK*EDSDPT Trigger: CGTGGGATCAGAATCTTCCAACTTTAGAGGTGCAAT...GGGCTTAATTAAGTTGTTTTTGTGGTCACGTTTATTCTTGTTACTTCGCTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS GCA 72 bp | ACCGGAACCCTCCAAGAACTGGAGATCAGCAGTTACTaGTGGAGGCTGAGCGACCCACACGCTTTGTCAATT | + |
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Preference number: 6 (lower is better) Translates to: TGTLQELEISSY*WRLSDPHALSI Trigger: AATTGACAAAGCGTGTGGGTCGCTCAGCCTCCAGCAGTAACTGCTGATCTCCAGTTCTTGGAGGGTTCCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320848.7 ENST00000500563.2 |
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| CDS TCA 72 bp | TCCAAGAACTGGAGATCAGCAGTTACTGCTGGAGGCTaGGCGACCCACACGCTTTGTCAATTGTACTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: SKNWRSAVTAGG*ATHTLCQLYSR Trigger: TCGGGAGTACAATTGACAAAGCGTGTGGGTCGCTCAGCCTCCAGCAGTAACTGCTGATCTCCAGTTCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320848.7 ENST00000500563.2 |
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| CDS CCA 72 bp | GGAACCCTCCAAGAACTGGAGATCAGCAGTTACTGCTaGAGGCTGAGCGACCCACACGCTTTGTCAATTGTA | + |
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Preference number: 6 (lower is better) Translates to: GTLQELEISSYC*RLSDPHALSIV Trigger: TACAATTGACAAAGCGTGTGGGTCGCTCAGCCTCCAGCAGTAACTGCTGATCTCCAGTTCTTGGAGGGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320848.7 ENST00000500563.2 |
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| CDS GCA 72 bp | AATGGCCTCTGGCTTTACTCTTTATTTCTCCTTCCCTaGGTTCTCAGCCTGCGTTCCACTGTGCTCTATGGC | + |
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Preference number: 6 (lower is better) Translates to: NGLWLYSLFLLP*VLSLRSTVLYG Trigger: GCCATAGAGCACAGTGGAACGCAGGCTGAGAACGCAGGGAAGGAGAAATAAAGAGTAAAGCCAGAGGCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500563.2 |
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| CDS CCA 72 bp | GCCTTTCGCTTCACAACTCTGCGGGAAGAATCGCCGTaGATGCACACAAATAAGCGGCCTACAAAATGGAGT | + |
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Preference number: 6 (lower is better) Translates to: AFRFTTLREESP*MHTNKRPTKWS Trigger: ACTCCATTTTGTAGGCCGCTTATTTGTGTGCATCCACGGCGATTCTTCCCGCAGAGTTGTGAAGCGAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS CAA 90 bp | ACAAGCTGTTTCAGTTTCCTCAAGGTGTCAGTTCATCCTTACCAGTaGACTACAGTCCTCAGCTGTGAACCACCGATCTCCTCCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: TSCFSFLKVSVHPYQ*TTVLSCEPPISSFK Trigger: CTTGAAGGAGGAGATCGGTGGTTCACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAACTGACACCTTGAGGAAACTGAAACAGCTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320848.7 |
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| CDS TCA 72 bp | TCAGTTTCCTCAAGGTGTCAGTTCATCCTTACCAGTTaGCTACAGTCCTCAGCTGTGAACCTAAAGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: SVSSRCQFILTS*LQSSAVNLKHN Trigger: ATTGTGCTTTAGGTTCACAGCTGAGGACTGTAGTCAACTGGTAAGGATGAACTGACACCTTGAGGAAACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500563.2 |
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| CDS CCA 72 bp | CACGGTCCTCTGACATACCTGTCTCATAGAACAATCTaGAAATTTCAGGTAATGGCCTCTGGCTTTACTCTT | + |
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Preference number: 6 (lower is better) Translates to: HGPLTYLSHRTI*KFQVMASGFTL Trigger: AAGAGTAAAGCCAGAGGCCATTACCTGAAATTTCCAGATTGTTCTATGAGACAGGTATGTCAGAGGACCGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500563.2 |
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