Pregenerated sensors for MRFAP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000179010Ensembl transcript IDs: ENST00000320912.8, ENST00000382581.5, ENST00000512914.1, ENST00000617365.4
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCGAAGAGCGGCCAAGCTGGGGCCGCTCCTCGGCCTGGCGCGGGTaGCCGACTTACCGCCGACCGCGCTCACGACGACTCGCTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LEERPSWGRSSAWRG*PTYRRPRSRRLALL Trigger: GAGAAGAGCGAGTCGTCGTGAGCGCGGTCGGCGGTAAGTCGGGCACCCGCGCCAGGCCGAGGAGCGGCCCCAGCTTGGCCGCTCTTCGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS CCA 90 bp | ATCATCGCTCTCGAAGAGCGGCCAAGCTGGGGCCGCTCCTCGGCCTaGCGCGGGTGCCCGACTTACCGCCGACCGCGCTCACGACGACTC | + |
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Preference number: 5 (lower is better) Translates to: IIALEERPSWGRSSA*RGCPTYRRPRSRRL Trigger: GAGTCGTCGTGAGCGCGGTCGGCGGTAAGTCGGGCACCCGCGCCAGGCCGAGGAGCGGCCCCAGCTTGGCCGCTCTTCGAGAGCGATGAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS CCA 90 bp | CCGGTGCATCTCGATGAAATCATCGCTCTCGAAGAGCGGCCAAGCTaGGGCCGCTCCTCGGCCTGGCGCGGGTGCCCGACTTACCGCCGA | + |
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Preference number: 5 (lower is better) Translates to: PVHLDEIIALEERPS*GRSSAWRGCPTYRR Trigger: TCGGCGGTAAGTCGGGCACCCGCGCCAGGCCGAGGAGCGGCCCCAGCTTGGCCGCTCTTCGAGAGCGATGATTTCATCGAGATGCACCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS TCA 90 bp | CCGGGCGTCGTGTTGCACGCGTGTAACCCCAGCTGCTTGGGAGGCTaGGACAATCGTTTGAAAACGGGAGGCGGAGGTTGCAGTGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: PGVVLHACNPSCLGG*DNRLKTGGGGCSEP Trigger: GGGCTCACTGCAACCTCCGCCTCCCGTTTTCAAACGATTGTCTCAGCCTCCCAAGCAGCTGGGGTTACACGCGTGCAACACGACGCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000320912.8 ENST00000617365.4 |
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| CDS GCA 90 bp | ACGCAGGCACGCGCAGGTACGGGACCGCACGCTCTCGCTCGTTCCTaGTTTCCCGTTACCTCTGTGCGTCACCCCTGTTTTACCCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: TQARAGTGPHALARS*FPVTSVRHPCFTLC Trigger: ACACAGGGTAAAACAGGGGTGACGCACAGAGGTAACGGGAAAGCAGGAACGAGCGAGAGCGTGCGGTCCCGTACCTGCGCGTGCCTGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000320912.8 ENST00000617365.4 |
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| CDS GCA 90 bp | CGGGACCGCACGCTCTCGCTCGTTCCTGCTTTCCCGTTACCTCTGTaGGTCACCCCTGTTTTACCCTGTGTTTGGAGGGTGGCCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: RDRTLSLVPAFPLPL*VTPVLPCVWRVASS Trigger: AGAAGAGGCCACCCTCCAAACACAGGGTAAAACAGGGGTGACGCACAGAGGTAACGGGAAAGCAGGAACGAGCGAGAGCGTGCGGTCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000320912.8 ENST00000617365.4 |
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| CDS TCA 90 bp | TCACGAACGCCACTGTGCAGGACGCCACCTCTTCTGGCCACCACCTaGCTCACTCCAGTCTCTAGCAACGTTGACTTGTCCAACGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SRTPLCRTPPLLATT*LTPVSSNVDLSNVF Trigger: GAAGACGTTGGACAAGTCAACGTTGCTAGAGACTGGAGTGAGTCAGGTGGTGGCCAGAAGAGGTGGCGTCCTGCACAGTGGCGTTCGTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS CCA 90 bp | GCTTTCCCGTTACCTCTGTGCGTCACCCCTGTTTTACCCTGTGTTTaGAGGGTGGCCTCTTCTGGGTGTTTCCCTCCGATAGGGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: AFPLPLCVTPVLPCV*RVASSGCFPPIGLL Trigger: AAGAAGCCCTATCGGAGGGAAACACCCAGAAGAGGCCACCCTCCAAACACAGGGTAAAACAGGGGTGACGCACAGAGGTAACGGGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000320912.8 ENST00000617365.4 |
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| CDS GCA 72 bp | CGGCCAAGCTGGGGCCGCTCCTCGGCCTGGCGCGGGTaGCCGACTTACCGCCGACCGCGCTCACGACGACTC | + |
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Preference number: 6 (lower is better) Translates to: RPSWGRSSAWRG*PTYRRPRSRRL Trigger: GAGTCGTCGTGAGCGCGGTCGGCGGTAAGTCGGGCACCCGCGCCAGGCCGAGGAGCGGCCCCAGCTTGGCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS CCA 72 bp | CTCGAAGAGCGGCCAAGCTGGGGCCGCTCCTCGGCCTaGCGCGGGTGCCCGACTTACCGCCGACCGCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LEERPSWGRSSA*RGCPTYRRPRS Trigger: TGAGCGCGGTCGGCGGTAAGTCGGGCACCCGCGCCAGGCCGAGGAGCGGCCCCAGCTTGGCCGCTCTTCGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS CCA 72 bp | CTCGATGAAATCATCGCTCTCGAAGAGCGGCCAAGCTaGGGCCGCTCCTCGGCCTGGCGCGGGTGCCCGACT | + |
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Preference number: 6 (lower is better) Translates to: LDEIIALEERPS*GRSSAWRGCPT Trigger: AGTCGGGCACCCGCGCCAGGCCGAGGAGCGGCCCCAGCTTGGCCGCTCTTCGAGAGCGATGATTTCATCGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS TCA 72 bp | TTCTCCCGCCCCACCCCCGATTCCGGTGCATCTCGATaGAATCATCGCTCTCGAAGAGCGGCCAAGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FSRPTPDSGASR*NHRSRRAAKLG Trigger: CCCCAGCTTGGCCGCTCTTCGAGAGCGATGATTTCATCGAGATGCACCGGAATCGGGGGTGGGGCGGGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS GCA 72 bp | CGCGCAGGTACGGGACCGCACGCTCTCGCTCGTTCCTaGTTTCCCGTTACCTCTGTGCGTCACCCCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RAGTGPHALARS*FPVTSVRHPCF Trigger: AAAACAGGGGTGACGCACAGAGGTAACGGGAAAGCAGGAACGAGCGAGAGCGTGCGGTCCCGTACCTGCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000320912.8 ENST00000617365.4 |
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| CDS GCA 72 bp | CACGCCTTTATTCTCCCGCCCCACCCCCGATTCCGGTaGATCTCGATGAAATCATCGCTCTCGAAGAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: HAFILPPHPRFR*ISMKSSLSKSG Trigger: GCCGCTCTTCGAGAGCGATGATTTCATCGAGATGCACCGGAATCGGGGGTGGGGCGGGAGAATAAAGGCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS CAA 90 bp | CCCCCGCTTGCTGGACGGCCCGGGACCTTGTCCGTTTCTGTTTCCTaGGCGACTCTGAGATTTATGACCCTTCCACTGAACACGCATCAC | + |
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Preference number: 6 (lower is better) Translates to: PPLAGRPGTLSVSVS*ATLRFMTLPLNTHH Trigger: GTGATGCGTGTTCAGTGGAAGGGTCATAAATCTCAGAGTCGCCAAGGAAACAGAAACGGACAAGGTCCCGGGCCGTCCAGCAAGCGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS TCA 72 bp | GTGTTGCACGCGTGTAACCCCAGCTGCTTGGGAGGCTaGGACAATCGTTTGAAAACGGGAGGCGGAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: VLHACNPSCLGG*DNRLKTGGGGC Trigger: GCAACCTCCGCCTCCCGTTTTCAAACGATTGTCTCAGCCTCCCAAGCAGCTGGGGTTACACGCGTGCAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000320912.8 ENST00000617365.4 |
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| CDS TCA 72 bp | CCACTGTGCAGGACGCCACCTCTTCTGGCCACCACCTaGCTCACTCCAGTCTCTAGCAACGTTGACTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PLCRTPPLLATT*LTPVSSNVDLS Trigger: GGACAAGTCAACGTTGCTAGAGACTGGAGTGAGTCAGGTGGTGGCCAGAAGAGGTGGCGTCCTGCACAGTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS GCA 72 bp | ACGCTCTCGCTCGTTCCTGCTTTCCCGTTACCTCTGTaGGTCACCCCTGTTTTACCCTGTGTTTGGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: TLSLVPAFPLPL*VTPVLPCVWRV Trigger: CACCCTCCAAACACAGGGTAAAACAGGGGTGACGCACAGAGGTAACGGGAAAGCAGGAACGAGCGAGAGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000320912.8 ENST00000617365.4 |
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| CDS CAA 72 bp | CTATTTCCACCCCCGCTTGCTGGACGGCCCGGGACCTaGTCCGTTTCTGTTTCCTTGGCGACTCTGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: LFPPPLAGRPGT*SVSVSLATLRF Trigger: AAATCTCAGAGTCGCCAAGGAAACAGAAACGGACAAGGTCCCGGGCCGTCCAGCAAGCGGGGGTGGAAATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS TCA 72 bp | GTAACCCCAGCTGCTTGGGAGGCTGAGACAATCGTTTaGAAACGGGAGGCGGAGGTTGCAGTGAGCCCATAT | + |
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Preference number: 6 (lower is better) Translates to: VTPAAWEAETIV*KREAEVAVSPY Trigger: ATATGGGCTCACTGCAACCTCCGCCTCCCGTTTTCAAACGATTGTCTCAGCCTCCCAAGCAGCTGGGGTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000320912.8 ENST00000617365.4 |
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| CDS CAA 72 bp | GCTGGACGGCCCGGGACCTTGTCCGTTTCTGTTTCCTaGGCGACTCTGAGATTTATGACCCTTCCACTGAAC | + |
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Preference number: 6 (lower is better) Translates to: AGRPGTLSVSVS*ATLRFMTLPLN Trigger: GTTCAGTGGAAGGGTCATAAATCTCAGAGTCGCCAAGGAAACAGAAACGGACAAGGTCCCGGGCCGTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS CAA 90 bp | GAAAATCCTCTATTTCCACCCCCGCTTGCTGGACGGCCCGGGACCTaGTCCGTTTCTGTTTCCTTGGCGACTCTGAGATTTATGACCCTT | + |
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Preference number: 6 (lower is better) Translates to: ENPLFPPPLAGRPGT*SVSVSLATLRFMTL Trigger: AAGGGTCATAAATCTCAGAGTCGCCAAGGAAACAGAAACGGACAAGGTCCCGGGCCGTCCAGCAAGCGGGGGTGGAAATAGAGGATTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS CAA 90 bp | CACCTCTTCTGGCCACCACCTGACTCACTCCAGTCTCTAGCAACGTaGACTTGTCCAACGTCTTCCCCGAAAATCCTCTATTTCCACCCC | + |
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Preference number: 6 (lower is better) Translates to: HLFWPPPDSLQSLAT*TCPTSSPKILYFHP Trigger: GGGGTGGAAATAGAGGATTTTCGGGGAAGACGTTGGACAAGTCAACGTTGCTAGAGACTGGAGTGAGTCAGGTGGTGGCCAGAAGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS CAA 72 bp | TGGCCACCACCTGACTCACTCCAGTCTCTAGCAACGTaGACTTGTCCAACGTCTTCCCCGAAAATCCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: WPPPDSLQSLAT*TCPTSSPKILY Trigger: ATAGAGGATTTTCGGGGAAGACGTTGGACAAGTCAACGTTGCTAGAGACTGGAGTGAGTCAGGTGGTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512914.1 |
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| CDS GCA 72 bp | CGATGTCTGTTGGAGAGAGAAAACCGACACTCGCTATaGTTAGCAATAGAGAGCCCGAATATTCCTGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: RCLLERENRHSL*LAIESPNIPEN Trigger: GTTTTCAGGAATATTCGGGCTCTCTATTGCTAAGCATAGCGAGTGTCGGTTTTCTCTCTCCAACAGACATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000382581.5 ENST00000512914.1 ENST00000617365.4 |
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