RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRAS (Homo sapiens)

Ensembl gene IDs: ENSG00000158186

Ensembl transcript IDs: ENST00000289104.8, ENST00000423968.7, ENST00000461114.1, ENST00000464896.5, ENST00000474559.1, ENST00000475711.5, ENST00000477784.1, ENST00000478647.1, ENST00000494949.5, ENST00000614350.4, ENST00000621127.4

Found 925 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAGTTGCAGCTCCACGGTGGGCATGGGGTATGCTCGTAGTGGTTaGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGTG +
Preference number: 1 (lower is better)
Translates to: RSCSSTVGMGYARSG*CPAGVFWLWTLPCV
Trigger: CACACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGGAGCTGCAACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp GATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTaGGAAAGCCCGTGCCCTCTGGGCAAAGCCAGACCCTGTCTGCTC +
Preference number: 1 (lower is better)
Translates to: DAASAYRWLPCLFER*ESPCPLGKARPCLL
Trigger: GAGCAGACAGGGTCTGGCTTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR TCA 90 bp ACAGGCCCCACGAGGCCAGCCAGGCATTTTCCACAGCAAGTGCCATaGGAAGGAGGTGGGCAAAGTCCTAAGAGAAACCATCCAGGTGTC +
Preference number: 1 (lower is better)
Translates to: TGPTRPARHFPQQVP*EGGGQSPKRNHPGV
Trigger: GACACCTGGATGGTTTCTCTTAGGACTTTGCCCACCTCCTTCTCATGGCACTTGCTGTGGAAAATGCCTGGCTGGCCTCGTGGGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTaGACAGGTAGTAAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAG +
Preference number: 1 (lower is better)
Translates to: GKVLRETIQVSRVAK*TGSKWPLSPAVGVE
Trigger: CTCCACTCCCACGGCTGGGGACAATGGCCACTTACTACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp TATCAAACTCAGTGCTGTCGAGGAGTTGCAGCTCCACGGTGGGCATaGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGC +
Preference number: 1 (lower is better)
Translates to: YQTQCCRGVAAPRWA*GMLVVVGAQQEFSG
Trigger: GCCAGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACTGAGTTTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp ATGAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATaGTGTGGCGTGGCCAACCAGGTTTCCCAGTCTGACCCTGCTAGA +
Preference number: 1 (lower is better)
Translates to: MRMSNSQKSQLAPRS*CGVANQVSQSDPAR
Trigger: TCTAGCAGGGTCAGACTGGGAAACCTGGTTGGCCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp GAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTAGTAAGTaGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATT +
Preference number: 1 (lower is better)
Translates to: ETIQVSRVAKCTGSK*PLSPAVGVERMARI
Trigger: AATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTTACTACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 90 bp GATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGAGGAGTTaGAGCTCCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGC +
Preference number: 1 (lower is better)
Translates to: DLLPVRLSNSVLSRS*SSTVGMGYARSGWC
Trigger: GCACCAACCACTACGAGCATACCCCATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp CAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTaGCCAACCAGGTTTCCCAGTCTGACCCTGCTAGATGATAATGGA +
Preference number: 1 (lower is better)
Translates to: QTARSPSWLLGHGVA*PTRFPSLTLLDDNG
Trigger: TCCATTATCATCTAGCAGGGTCAGACTGGGAAACCTGGTTGGCCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 90 bp GGGGATGTGAGGGTAGCACTATTCTCCGGAAGACCAACGGGAACATaGGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCAT +
Preference number: 1 (lower is better)
Translates to: GDVRVALFSGRPTGT*GCQTARSPSWLLGH
Trigger: ATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTCATGTTCCCGTTGGTCTTCCGGAGAATAGTGCTACCCTCACATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp TCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTaGGTTTCTTTCTCCAGAGTGGCCAGGCCACCTGCTGAGGATATT +
Preference number: 1 (lower is better)
Translates to: SEPGCLGIQLGAHFP*VSFSRVARPPAEDI
Trigger: AATATCCTCAGCAGGTGGCCTGGCCACTCTGGAGAAAGAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp GTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATaGATGAACAGATGCACTGTCCCTTCTGTCCCAACTGTGTGGTTG +
Preference number: 1 (lower is better)
Translates to: VSLRHHGVQRGPSAG*MNRCTVPSVPTVWL
Trigger: CAACCACACAGTTGGGACAGAAGGGACAGTGCATCTGTTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 90 bp CTCCTTCCTACCTGCCTTTCCTCCGCCTCACCTCCAGTTTGCAGCTaGCATCAAACTGCACACAACAAACTGCTGCAGATACCACTTAGG +
Preference number: 1 (lower is better)
Translates to: LLPTCLSSASPPVCS*HQTAHNKLLQIPLR
Trigger: CCTAAGTGGTATCTGCAGCAGTTTGTTGTGTGCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGCGGAGGAAAGGCAGGTAGGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp GACCAACCCTTAACTAGTCTCTCTCAGGCACCATGGAGTTCAACGTaGGCCAAGTGCAGGATGGATGAACAGATGCACTGTCCCTTCTGT +
Preference number: 1 (lower is better)
Translates to: DQPLTSLSQAPWSST*AKCRMDEQMHCPFC
Trigger: ACAGAAGGGACAGTGCATCTGTTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 90 bp TTTATGGCCGAGGTCTCTGTTCTACATCAGCTGATCTGCTTCCAGTaGGACTATCAAACTCAGTGCTGTCGAGGAGTTGCAGCTCCACGG +
Preference number: 1 (lower is better)
Translates to: FMAEVSVLHQLICFQ*DYQTQCCRGVAAPR
Trigger: CCGTGGAGCTGCAACTCCTCGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACAGAGACCTCGGCCATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 90 bp TTAACTAGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTaGAGGATGGATGAACAGATGCACTGTCCCTTCTGTCCCAACTGT +
Preference number: 1 (lower is better)
Translates to: LTSLSQAPWSSTWAK*RMDEQMHCPFCPNC
Trigger: ACAGTTGGGACAGAAGGGACAGTGCATCTGTTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACTAGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp GAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATaGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAACAGATGCAC +
Preference number: 1 (lower is better)
Translates to: EDTEDQPLTSLSQAP*SSTWAKCRMDEQMH
Trigger: GTGCATCTGTTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp GCAGGATGGATGAACAGATGCACTGTCCCTTCTGTCCCAACTGTGTaGTTGAAATCCCTATGTCTTCTCACCTTTATGGCCGAGGTCTCT +
Preference number: 1 (lower is better)
Translates to: AGWMNRCTVPSVPTV*LKSLCLLTFMAEVS
Trigger: AGAGACCTCGGCCATAAAGGTGAGAAGACATAGGGATTTCAACCACACAGTTGGGACAGAAGGGACAGTGCATCTGTTCATCCATCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 90 bp GAAGGGGTCTGCTCATTGACTAGGCTTATAGAGGTGGTAGTCAGTTaGCTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTG +
Preference number: 1 (lower is better)
Translates to: EGVCSLTRLIEVVVS*LQGKMASGLGAVLV
Trigger: CACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAGTCAACTGACTACCACCTCTATAAGCCTAGTCAATGAGCAGACCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 90 bp CCTCACCTCCAGTTTGCAGCTGCCATCAAACTGCACACAACAAACTaGTGCAGATACCACTTAGGGAAGCATAAGGATTGGGAAGAGCTT +
Preference number: 1 (lower is better)
Translates to: PHLQFAAAIKLHTTN*CRYHLGKHKDWEEL
Trigger: AAGCTCTTCCCAATCCTTATGCTTCCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTGCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 90 bp TATGTCTTCTCACCTTTATGGCCGAGGTCTCTGTTCTACATCAGCTaGTCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGAGGAG +
Preference number: 1 (lower is better)
Translates to: YVFSPLWPRSLFYIS*SASSETIKLSAVEE
Trigger: CTCCTCGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACAGAGACCTCGGCCATAAAGGTGAGAAGACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 90 bp AGCATGAACTGGAGTTTTCTGGATGGTGTCCACATTAGGTTACTTTaGCGTGTCAGTGTATTCGTATCAGAGAGGCACCAAGCAGCACAG +
Preference number: 1 (lower is better)
Translates to: SMNWSFLDGVHIRLL*RVSVFVSERHQAAQ
Trigger: CTGTGCTGCTTGGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACACCATCCAGAAAACTCCAGTTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 90 bp ACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATaGGGGCCCACTTCTACAAATGGGGCATTATTTACCCATTTCATT +
Preference number: 1 (lower is better)
Translates to: TLYTLLWPIWKLPQS*GPTSTNGALFTHFI
Trigger: AATGAAATGGGTAAATAATGCCCCATTTGTAGAAGTGGGCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 90 bp GCCTATCTGGAAGCTACCTCAGTCATGAGGGCCCACTTCTACAAATaGGGCATTATTTACCCATTTCATTTATGGGGAAATGAGTTCATG +
Preference number: 1 (lower is better)
Translates to: AYLEATSVMRAHFYK*GIIYPFHLWGNEFM
Trigger: CATGAACTCATTTCCCCATAAATGAAATGGGTAAATAATGCCCCATTTGTAGAAGTGGGCCCTCATGACTGAGGTAGCTTCCAGATAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 90 bp ATACAAAGACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTaGGATCTTCAGGCATCACTCGTTTCACGACAATGGCCACCTGTT +
Preference number: 1 (lower is better)
Translates to: IQRLNKKLHRRFKHH*DLQASLVSRQWPPV
Trigger: AACAGGTGGCCATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTCTTTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAAAGGGGTCCCGAGGGCTaGCCAGGCCACCGTCACTGT +
Preference number: 2 (lower is better)
Translates to: PALLPSCTKSLGQGLWLERGPEG*PGHRHC
Trigger: ACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTAGGTGGGAAAGCCCGTaGCCTCTGGGCAAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSRWESP*PLGKAR
Trigger: TCTGGCTTTGCCCAGAGGGCACGGGCTTTCCCACCT...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCAGGGGTCCCGAGGGCTaGCCAGGCCACCGTCACTGT +
Preference number: 2 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFRGPEG*PGHRHC
Trigger: ACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CAA 90 bp GGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTaGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAAGCCAGACCCT +
Preference number: 2 (lower is better)
Translates to: GTWMLLLLTGGFLVS*RGGKARALWAKPDP
Trigger: AGGGTCTGGCTTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGGCTTCCTTGTCTCTTTaGGAGGTGGGAAAGCCCGTG +
Preference number: 2 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWASLSL*EVGKPV
Trigger: CACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGC...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTCCAGGGGCACTTGGATaGTGCTTCTGCTTACAGGTG +
Preference number: 2 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSPGALG*CFCLQV
Trigger: CACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCTGG...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGGAGCTGGGGAGACTaGCCCCTTGCAGAAGGTATA +
Preference number: 2 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRGSWGD*PLAEGI
Trigger: TATACCTTCTGCAAGGGGGCAGTCTCCCCAGCTCCC...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTGTGCTGTCGAGGAGTTaGAGCTCCACGGTGGGCATG +
Preference number: 2 (lower is better)
Translates to: KWPLSPAVGVERMARIISVLSRS*SSTVGM
Trigger: CATGCCCACCGTGGAGCTGCAACTCCTCGACAGCAC...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGCCAGCAGGAGTTTTCTaGCTGTGGACACTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWPAGVF*LWTLPC
Trigger: ACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGG...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGGAGGTGGTAGTCAGTTaGCTCCAAGGGAAGATGGCT +
Preference number: 2 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWEVVVS*LQGKMA
Trigger: AGCCATCTTCCCTTGGAGTCAACTGACTACCACCTC...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGGGCCAGGCCACCTGCTaGGGATATTCTAGTTTGCAT +
Preference number: 2 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWGQATC*GYSSLH
Trigger: ATGCAAACTAGAATATCCTCAGCAGGTGGCCTGGCC...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCTTCAGTGCAGTTAGGTaGGGAGGGGTCCCGAGGGCT +
Preference number: 2 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFFSAVR*GGVPRA
Trigger: AGCCCTCGGGACCCCTCCCCACCTAACTGCACTGAA...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGGACTCCAAGGGAAGATaGCTTCAGGTCTTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWDSKGR*LQVLVL
Trigger: CAGCACCAAGACCTGAAGCCATCTTCCCTTGGAGTC...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGCCATGGAGTTCAACGTaGGCCAAGTGCAGGATGGAT +
Preference number: 2 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWPWSST*AKCRMD
Trigger: ATCCATCCTGCACTTGGCCCACGTTGAACTCCATGG...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CAA 90 bp ATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTAGTAAGTGGCCATaGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCT +
Preference number: 2 (lower is better)
Translates to: IQVSRVAKCTGSKWP*SPAVGVERMARIIS
Trigger: AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTTACTACCTGTGCACTTTGCCACTCGGGACACCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTGCTTCCTTGTCTCTTTaGGAGGTGGGAAAGCCCGTG +
Preference number: 2 (lower is better)
Translates to: KWPLSPAVGVERMARIISASLSL*EVGKPV
Trigger: CACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGC...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTACCAAGCAGCACAGCTaGTGTGAAAACGCAGCAAGA +
Preference number: 2 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSTKQHS*CENAAR
Trigger: TCTTGCTGCGTTTTCACATCAGCTGTGCTGCTTGGT...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGAGGTGGTAGTCAGTTaGCTCCAAGGGAAGATGGCT +
Preference number: 2 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWREVVVS*LQGKMA
Trigger: AGCCATCTTCCCTTGGAGTCAACTGACTACCACCTC...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGTGGCATCCAGTTGGGTaGTCACTTTCCTTGGGTTTC +
Preference number: 2 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVWHPVG*SLSLGF
Trigger: GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCA...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTGCTCGTAGTGGTTGGTaGCCAGCAGGAGTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: KWPLSPAVGVERMARIISARSGW*PAGVFW
Trigger: CCAGAAAACTCCTGCTGGGCACCAACCACTACGAGC...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGGGGGCCAGGGGCACTTaGATGCTGCTTCTGCTTACA +
Preference number: 2 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWGARGT*MLLLLT
Trigger: TGTAAGCAGAAGCAGCATCCAAGTGCCCCTGGCCCC...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAAGCTCCACGGTGGGCATaGGGTATGCTCGTAGTGGTT +
Preference number: 2 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDEAPRWA*GMLVVV
Trigger: AACCACTACGAGCATACCCCATGCCCACCGTGGAGC...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGACCAGAGAGGTCTGCTaGACACTTGAAACTTCACCA +
Preference number: 2 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWTREVC*TLETSP
Trigger: TGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGT...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGCTGATCTGCTTCCAGTaGGACTATCAAACTCAGTGC +
Preference number: 2 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWLICFQ*DYQTQC
Trigger: GCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAG...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGGGGCACTTGGATGCTaGTTCTGCTTACAGGTGGCT +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGGALGC*FCLQVA
Trigger: AGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCCCAGGGGCACTTGGATaGTGCTTCTGCTTACAGGTG +
Preference number: 2 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFPGALG*CFCLQV
Trigger: CACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCTGG...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGGGAGACTGCCCCCTTaGAGAAGGTATATGAGAGCC +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGGRLPP*RRYMRA
Trigger: GGCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGCTGCACACAACAAACTaGTGCAGATACCACTTAGGG +
Preference number: 2 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWLHTTN*CRYHLG
Trigger: CCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTGCAG...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTCAGCTGCCATCAAACTaGACACAACAAACTGCTGCA +
Preference number: 2 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSQLPSN*TQQTAA
Trigger: TGCAGCAGTTTGTTGTGTGCAGTTTGATGGCAGCTG...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTTACTCCTTCCTACCTaGCTTTCCTCCGCCTCACCT +
Preference number: 2 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATLLLPT*LSSASP
Trigger: AGGTGAGGCGGAGGAAAGGCAGGTAGGAAGGAGTAA...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGGACACTGCCCTGTGTaGAGGGCTTCTTCTCCTACT +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGGHCPV*RASSPT
Trigger: AGTAGGAGAAGAAGCCCTGCACACAGGGCAGTGTCC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGCTCGTAGTGGTTGGTaGCCAGCAGGAGTTTTCTGG +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGARSGW*PAGVFW
Trigger: CCAGAAAACTCCTGCTGGGCACCAACCACTACGAGC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CAA 90 bp TCTCTCATTTCTAGGCCATGTGTAGGGTCTCTTTCCCTCCCAGGTTaGACCCATGGCCTGAGGCCTCCAGCTACAGTTCCCATTACCTTC +
Preference number: 2 (lower is better)
Translates to: SLISRPCVGSLSLPG*THGLRPPATVPITF
Trigger: GAAGGTAATGGGAACTGTAGCTGGAGGCCTCAGGCCATGGGTCAAACCTGGGAGGGAAAGAGACCCTACACATGGCCTAGAAATGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGCCTCACCTCCAGTTTaGAGCTGCCATCAAACTGCA +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGASPPV*SCHQTA
Trigger: TGCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGATTTCAGGAAGGCTGTaGTCCAGGGGATGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWISGRL*SRGCEG
Trigger: ACCCTCACATCCCCTGGAGCACAGCCTTCCTGAAAT...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTATTTCAGGAAGGCTGTaGTCCAGGGGATGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGISGRL*SRGCEG
Trigger: ACCCTCACATCCCCTGGAGCACAGCCTTCCTGAAAT...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGCTTCTGCTTACAGGTaGCTTCCTTGTCTCTTTGAG +
Preference number: 2 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRASAYR*LPCLFE
Trigger: CTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGC...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGACTCCAAGGGAAGATaGCTTCAGGTCTTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGDSKGR*LQVLVL
Trigger: CAGCACCAAGACCTGAAGCCATCTTCCCTTGGAGTC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAACACTCCCACCCCAGCTaGAAAAACTCCAGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDEHSHPS*KNSSLW
Trigger: CCAAAGACTGGAGTTTTTCCAGCTGGGGTGGGAGTG...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTATGCTCGTAGTGGTTaGTGCCCAGCAGGAGTTTTC +
Preference number: 2 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATYARSG*CPAGVF
Trigger: GAAAACTCCTGCTGGGCACCAACCACTACGAGCATA...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGGGCCAAGTGCAGGATaGATGAACAGATGCACTGTC +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGGPSAG*MNRCTV
Trigger: GACAGTGCATCTGTTCATCCATCCTGCACTTGGCCC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTACAATGGCAAAGGCATaGGGTGAGGGCATTTCAGGA +
Preference number: 2 (lower is better)
Translates to: KWPLSPAVGVERMARIISTMAKA*GEGISG
Trigger: TCCTGAAATGCCCTCACCCCATGCCTTTGCCATTGT...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGTCCAGGTGTCCCGAGTaGCAAAGTGCACAGGTAGTA +
Preference number: 2 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWSRCPE*QSAQVV
Trigger: TACTACCTGTGCACTTTGCCACTCGGGACACCTGGA...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAGCTTCCTTGTCTCTTTaGGAGGTGGGAAAGCCCGTG +
Preference number: 2 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPASLSL*EVGKPV
Trigger: CACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGC...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAACTTGCAGAAGGTATATaGGAGCCACACATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDELAEGI*EPHISP
Trigger: TGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAG...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCCTTGCAGAAGGTATATaGGAGCCACACATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGLAEGI*EPHISP
Trigger: TGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAG...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCAGGTGGGAAAGCCCGTaGCCTCTGGGCAAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTRWESP*PLGKAR
Trigger: TCTGGCTTTGCCCAGAGGGCACGGGCTTTCCCACCT...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTCTTGGATGCTGCTTCTaGTTACAGGTGGCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGLGCCF*LQVASL
Trigger: CAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAG...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGATACTGGAAGGGGTCTaGTCATTGACTAGGCTTATA +
Preference number: 2 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWILEGV*SLTRLI
Trigger: TATAAGCCTAGTCAATGAGCAGACCCCTTCCAGTAT...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTATACTGGAAGGGGTCTaGTCATTGACTAGGCTTATA +
Preference number: 2 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSILEGV*SLTRLI
Trigger: TATAAGCCTAGTCAATGAGCAGACCCCTTCCAGTAT...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCCTGCACACAACAAACTaGTGCAGATACCACTTAGGG +
Preference number: 2 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATLHTTN*CRYHLG
Trigger: CCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTGCAG...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAACCTCCAGTTTGCAGCTaGCATCAAACTGCACACAAC +
Preference number: 2 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDEPPVCS*HQTAHN
Trigger: GTTGTGTGCAGTTTGATGGCAGCTGCAAACTGGAGG...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTTCAGTGCAGTTAGGTaGGGAGGGGTCCCGAGGGCT +
Preference number: 2 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSFSAVR*GGVPRA
Trigger: AGCCCTCGGGACCCCTCCCCACCTAACTGCACTGAA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTGCTTCTGCTTACAGGTaGCTTCCTTGTCTCTTTGAG +
Preference number: 2 (lower is better)
Translates to: KWPLSPAVGVERMARIISASAYR*LPCLFE
Trigger: CTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGC...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTTTGAAGTGCCTCACCTaGAATGTTCTCTCTTATCCT +
Preference number: 2 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSLKCLT*NVLSYP
Trigger: AGGATAAGAGAGAACATTCCAGGTGAGGCACTTCAA...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGGGGAAGCATAAGGATTaGGAAGAGCTTTGTCCTTTT +
Preference number: 2 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVGKHKD*EELCPF
Trigger: AAAAGGACAAAGCTCTTCCCAATCCTTATGCTTCCC...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CAA 90 bp TCTTGCCGAGGTAGGAACACAGCACATTTTCAGAACCCGGGTGTCTaGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: SCRGRNTAHFQNPGV*ASSWVLTFLGFLSP
Trigger: TGGAGAAAGAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTGCTGTGTTCCTACCTCGGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGAACTTCACCAGGCAGTaGGCCCAGACCCCTTTAATA +
Preference number: 2 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLNFTRQ*AQTPLI
Trigger: TATTAAAGGGGTCTGGGCTCACTGCCTGGTGAAGTT...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTACCAGAGAGGTCTGCTaGACACTTGAAACTTCACCA +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGTREVC*TLETSP
Trigger: TGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGT...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGGGTCTAAGGAAACTTTaGAGTGCCTCACCTGGAATG +
Preference number: 2 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWGLRKL*SASPGM
Trigger: CATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACC...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTCAGCTGCCATCAAACTaGACACAACAAACTGCTGCA +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGQLPSN*TQQTAA
Trigger: TGCAGCAGTTTGTTGTGTGCAGTTTGATGGCAGCTG...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTTGGGCCAAGGGTTGTaGTTAGAAATGGTTTCAGTG +
Preference number: 2 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATLGQGL*LEMVSV
Trigger: CACTGAAACCATTTCTAACCACAACCCTTGGCCCAA...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATGTCTCTTTGAGAGGTaGGAAAGCCCGTGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPCLFER*ESPCPL
Trigger: CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGCTTCTGCTTACAGGTaGCTTCCTTGTCTCTTTGAG +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGASAYR*LPCLFE
Trigger: CTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGGCATCATCAGGGAGCTaGGGAGACTGCCCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMASSGS*GDCPLA
Trigger: TGCAAGGGGGCAGTCTCCCCAGCTCCCTGATGATGC...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGAAAAACTCCAGTCTTTaGCTCACACCAGCAGCACCT +
Preference number: 2 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWKNSSL*LTPAAP
Trigger: AGGTGCTGCTGGTGTGAGCCAAAGACTGGAGTTTTT...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCAAAAACTCCAGTCTTTaGCTCACACCAGCAGCACCT +
Preference number: 2 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFKNSSL*LTPAAP
Trigger: AGGTGCTGCTGGTGTGAGCCAAAGACTGGAGTTTTT...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGGCTTCCTTGTCTCTTTaGGAGGTGGGAAAGCCCGTG +
Preference number: 2 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSASLSL*EVGKPV
Trigger: CACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGC...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTTCCCAACTGTGTGGTTaGAATCCCTATGTCTTCTCA +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGSQLCG*NPYVFS
Trigger: TGAGAAGACATAGGGATTTCAACCACACAGTTGGGA...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGGGGAGACTGCCCCCTTaGAGAAGGTATATGAGAGCC +
Preference number: 2 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSGRLPP*RRYMRA
Trigger: GGCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCC...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCAGATCCAGCATGAACTaGAGTTTTCTGGATGGTGTC +
Preference number: 2 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGRSSMN*SFLDGV
Trigger: GACACCATCCAGAAAACTCCAGTTCATGCTGGATCT...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTGATGGCTTCAGGTCTTaGTGCTGTTTTAGTGATAAC +
Preference number: 2 (lower is better)
Translates to: KWPLSPAVGVERMARIISDGFRS*CCFSDN
Trigger: GTTATCACTAAAACAGCACCAAGACCTGAAGCCATC...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTTGAAGTGCCTCACCTaGAATGTTCTCTCTTATCCT +
Preference number: 2 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATLKCLT*NVLSYP
Trigger: AGGATAAGAGAGAACATTCCAGGTGAGGCACTTCAA...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCTGTCCCAACTGTGTaGTTGAAATCCCTATGTCTT +
Preference number: 2 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATSVPTV*LKSLCL
Trigger: AAGACATAGGGATTTCAACCACACAGTTGGGACAGA...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGGGGAAATGAGTTCATaGGAGATGAAAGCTTACCAG +
Preference number: 2 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGGEMSS*EMKAYQ
Trigger: CTGGTAAGCTTTCATCTCCCATGAACTCATTTCCCC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CAA 90 bp GGATGGATGAACAGATGCACTGTCCCTTCTGTCCCAACTGTGTGGTaGAAATCCCTATGTCTTCTCACCTTTATGGCCGAGGTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: GWMNRCTVPSVPTVW*KSLCLLTFMAEVSV
Trigger: AACAGAGACCTCGGCCATAAAGGTGAGAAGACATAGGGATTTCAACCACACAGTTGGGACAGAAGGGACAGTGCATCTGTTCATCCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAACCAGAGAGGTCTGCTaGACACTTGAAACTTCACCA +
Preference number: 2 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSTREVC*TLETSP
Trigger: TGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGT...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCGTTGAGTTTTGGCACTaGTGGGAAAACTCGGTTAAA +
Preference number: 2 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFVEFWH*WENSVK
Trigger: TTTAACCGAGTTTTCCCATCAGTGCCAAAACTCAAC...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTCACATTAGGTTACTTTaGCGTGTCAGTGTATTCGTA +
Preference number: 2 (lower is better)
Translates to: KWPLSPAVGVERMARIISHIRLL*RVSVFV
Trigger: TACGAATACACTGACACGTCAAAGTAACCTAATGTG...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCACTTGCAGAAGGTATATaGGAGCCACACATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPLAEGI*EPHISP
Trigger: TGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAG...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGGGACACTGCCCTGTGTaGAGGGCTTCTTCTCCTACT +
Preference number: 2 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMGHCPV*RASSPT
Trigger: AGTAGGAGAAGAAGCCCTGCACACAGGGCAGTGTCC...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTGGGGCCAGGGGCACTTaGATGCTGCTTCTGCTTACA +
Preference number: 2 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVGARGT*MLLLLT
Trigger: TGTAAGCAGAAGCAGCATCCAAGTGCCCCTGGCCCC...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCACTCAGACATTGTGGATaGGGGGTAAGGGAAAGAAGC +
Preference number: 2 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPLRHCG*GVRERS
Trigger: GCTTCTTTCCCTTACCCCCCATCCACAATGTCTGAG...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAATTGAAGTGCCTCACCTaGAATGTTCTCTCTTATCCT +
Preference number: 2 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDELKCLT*NVLSYP
Trigger: AGGATAAGAGAGAACATTCCAGGTGAGGCACTTCAA...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCTCTGTCCCAACTGTGTaGTTGAAATCCCTATGTCTT +
Preference number: 2 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGSVPTV*LKSLCL
Trigger: AAGACATAGGGATTTCAACCACACAGTTGGGACAGA...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCAACCAGAGAGGTCTGCTaGACACTTGAAACTTCACCA +
Preference number: 2 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPTREVC*TLETSP
Trigger: TGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGT...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTGCAGCACAGCTGATGTaGAAACGCAGCAAGAGACAG +
Preference number: 2 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFAAQLM*KRSKRQ
Trigger: CTGTCTCTTGCTGCGTTTTCACATCAGCTGTGCTGC...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCACTGTTCTACATCAGCTaGTCTGCTTCCAGTGAGACT +
Preference number: 2 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPLFYIS*SASSET
Trigger: AGTCTCACTGGAAGCAGATCAGCTGATGTAGAACAG...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGCTTCAGGTCTTGGTaGTGTTTTAGTGATAACAGT +
Preference number: 2 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLGFRSW*CFSDNS
Trigger: ACTGTTATCACTAAAACAGCACCAAGACCTGAAGCC...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCAGACTATCAAACTCAGTaGTGTCGAGGAGTTGCAGCT +
Preference number: 2 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPDYQTQ*CRGVAA
Trigger: AGCTGCAACTCCTCGACAGCACTGAGTTTGATAGTC...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGCACTCCCACCCCAGCTaGAAAAACTCCAGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMHSHPS*KNSSLW
Trigger: CCAAAGACTGGAGTTTTTCCAGCTGGGGTGGGAGTG...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGACCAAGCAGCACAGCTaGTGTGAAAACGCAGCAAGA +
Preference number: 2 (lower is better)
Translates to: LQGKMASGLGAVLVITVLTKQHS*CENAAR
Trigger: TCTTGCTGCGTTTTCACATCAGCTGTGCTGCTTGGT...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGGGTCTAAGGAAACTTTaGAGTGCCTCACCTGGAATG +
Preference number: 2 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSGLRKL*SASPGM
Trigger: CATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACC...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGCTTGGATGCTGCTTCTaGTTACAGGTGGCTTCCTTG +
Preference number: 2 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMLGCCF*LQVASL
Trigger: CAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAG...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTCTGTTTTCTAATATTTaGATCCCCAACCATAGGAAA +
Preference number: 2 (lower is better)
Translates to: KWPLSPAVGVERMARIISLFSNI*IPNHRK
Trigger: TTTCCTATGGTTGGGGATGCAAATATTAGAAAACAG...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCCTGTTTTCTAATATTTaGATCCCCAACCATAGGAAA +
Preference number: 2 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATLFSNI*IPNHRK
Trigger: TTTCCTATGGTTGGGGATGCAAATATTAGAAAACAG...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCACACACAACAAACTGCTaGAGATACCACTTAGGGAAG +
Preference number: 2 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPHTTNC*RYHLGK
Trigger: CTTCCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTG...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGCTGCACACAACAAACTaGTGCAGATACCACTTAGGG +
Preference number: 2 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSLHTTN*CRYHLG
Trigger: CCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTGCAG...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCGCTTCTGCTTACAGGTaGCTTCCTTGTCTCTTTGAG +
Preference number: 2 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTASAYR*LPCLFE
Trigger: CTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGC...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATTGTCTCCTGGAAAAGTaGGACAGGCCCCACGAGGCC +
Preference number: 2 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHCLLEK*DRPHEA
Trigger: GGCCTCGTGGGGCCTGTCTCACTTTTCCAGGAGACA...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGCTGCACACAACAAACTaGTGCAGATACCACTTAGGG +
Preference number: 2 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMLHTTN*CRYHLG
Trigger: CCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTGCAG...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGAAGGAAACTTTGAAGTaGCTCACCTGGAATGTTCTC +
Preference number: 2 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSKETLK*LTWNVL
Trigger: GAGAACATTCCAGGTGAGGCACTTCAAAGTTTCCTT...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGAGATCCAGCATGAACTaGAGTTTTCTGGATGGTGTC +
Preference number: 2 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMRSSMN*SFLDGV
Trigger: GACACCATCCAGAAAACTCCAGTTCATGCTGGATCT...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATGCCAGAAGTCCCAGTTaGCTCCTCGGTCATGGTGTG +
Preference number: 2 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHARSPS*LLGHGV
Trigger: CACACCATGACCGAGGAGCCAACTGGGACTTCTGGC...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGGAGGGTGTCAAACAGTaGAAGAAATCTGAGAGCACA +
Preference number: 2 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMEGVKQ*KKSEST
Trigger: TGTGCTCTCAGATTTCTTCCACTGTTTGACACCCTC...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR GCA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTGGCTTCAGGTCTTGGTaGTGTTTTAGTGATAACAGT +
Preference number: 2 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFGFRSW*CFSDNS
Trigger: ACTGTTATCACTAAAACAGCACCAAGACCTGAAGCC...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATTTTCTTTCTCCAGAGTaGCCAGGCCACCTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHFLSPE*PGHLLR
Trigger: CCTCAGCAGGTGGCCTGGCCACTCTGGAGAAAGAAA...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGTTGAAGTGCCTCACCTaGAATGTTCTCTCTTATCCT +
Preference number: 2 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMLKCLT*NVLSYP
Trigger: AGGATAAGAGAGAACATTCCAGGTGAGGCACTTCAA...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATTCCAGGTGTCCCGAGTaGCAAAGTGCACAGGTAGTA +
Preference number: 2 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHSRCPE*QSAQVV
Trigger: TACTACCTGTGCACTTTGCCACTCGGGACACCTGGA...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATGGGGAAATGAGTTCATaGGAGATGAAAGCTTACCAG +
Preference number: 2 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHGEMSS*EMKAYQ
Trigger: CTGGTAAGCTTTCATCTCCCATGAACTCATTTCCCC...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR TCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATGTTGAGTTTTGGCACTaGTGGGAAAACTCGGTTAAA +
Preference number: 2 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHVEFWH*WENSVK
Trigger: TTTAACCGAGTTTTCCCATCAGTGCCAAAACTCAAC...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp CAGTGCTGTCGAGGAGTTGCAGCTCCACGGTGGGCATaGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAG +
Preference number: 3 (lower is better)
Translates to: QCCRGVAAPRWA*GMLVVVGAQQE
Trigger: CTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 72 bp GTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTaGCCTGTGTGCAGGGCTTCTTCTCCTACTCCGCCA +
Preference number: 3 (lower is better)
Translates to: VGAQQEFSGCGH*PVCRASSPTPP
Trigger: TGGCGGAGTAGGAGAAGAAGCCCTGCACACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp CAAACTCAGTGCTGTCGAGGAGTTGCAGCTCCACGGTaGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAG +
Preference number: 3 (lower is better)
Translates to: QTQCCRGVAAPR*AWGMLVVVGAQ
Trigger: CTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACTGAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp CAGGTGTCCCGAGTGGCAAAGTGCACAGGTAGTAAGTaGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATG +
Preference number: 3 (lower is better)
Translates to: QVSRVAKCTGSK*PLSPAVGVERM
Trigger: CATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTTACTACCTGTGCACTTTGCCACTCGGGACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTCGCCTCACCTCCAGTTaGCAGCTGCCATCAAACTGC +
Preference number: 3 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRRLTSS*QLPSNC
Trigger: GCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGCG...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp TCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTaGGAAAGCCCGTGCCCTCTGGGCAAAGCCAGACCC +
Preference number: 3 (lower is better)
Translates to: SAYRWLPCLFER*ESPCPLGKARP
Trigger: GGGTCTGGCTTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp GGCCAGGGGCACTTGGATGCTGCTTCTGCTTACAGGTaGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCG +
Preference number: 3 (lower is better)
Translates to: GQGHLDAASAYR*LPCLFERWESP
Trigger: CGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp AGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTaGCCAACCAGGTTTCCCAGTCTGACCCTGCTAGAT +
Preference number: 3 (lower is better)
Translates to: RSPSWLLGHGVA*PTRFPSLTLLD
Trigger: ATCTAGCAGGGTCAGACTGGGAAACCTGGTTGGCCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp TCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATaGTGTGGCGTGGCCAACCAGGTTTCCCAGTCTGAC +
Preference number: 3 (lower is better)
Translates to: SNSQKSQLAPRS*CGVANQVSQSD
Trigger: GTCAGACTGGGAAACCTGGTTGGCCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCCTTTCCCTCCCAGGTTaGACCCATGGCCTGAGGCCT +
Preference number: 3 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGLSLPG*THGLRP
Trigger: AGGCCTCAGGCCATGGGTCAAACCTGGGAGGGAAAG...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTCGCCTCACCTCCAGTTaGCAGCTGCCATCAAACTGC +
Preference number: 3 (lower is better)
Translates to: KWPLSPAVGVERMARIISRLTSS*QLPSNC
Trigger: GCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGCG...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp TGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTaGAAAAGTGAGACAGGCCCCACGAGGCCAGCCAGG +
Preference number: 3 (lower is better)
Translates to: WVKVATLVGHVS*KSETGPTRPAR
Trigger: CCTGGCTGGCCTCGTGGGGCCTGTCTCACTTTTCCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTTCCTGTACCAAGTCCTaGGGCCAAGGGTTGTGGTTA +
Preference number: 3 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRSCTKS*GQGLWL
Trigger: TAACCACAACCCTTGGCCCAAGGACTTGGTACAGGA...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGAAGGGGTCTGCTCATaGACTAGGCTTATAGAGGTG +
Preference number: 3 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSEGVCS*TRLIEV
Trigger: CACCTCTATAAGCCTAGTCAATGAGCAGACCCCTTC...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTAGCCAGAAGTCCCAGTaGGCTCCTCGGTCATGGTGT +
Preference number: 3 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGSQKSQ*APRSWC
Trigger: ACACCATGACCGAGGAGCCAACTGGGACTTCTGGCT...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 72 bp CCAGTGAGACTATCAAACTCAGTGCTGTCGAGGAGTTaGAGCTCCACGGTGGGCATGGGGTATGCTCGTAGT +
Preference number: 3 (lower is better)
Translates to: PVRLSNSVLSRS*SSTVGMGYARS
Trigger: ACTACGAGCATACCCCATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACTGAGTTTGATAGTCTCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 72 bp CTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTaGACAGGTAGTAAGTGGCCATTGTCCCCAGCCGTG +
Preference number: 3 (lower is better)
Translates to: LRETIQVSRVAK*TGSKWPLSPAV
Trigger: CACGGCTGGGGACAATGGCCACTTACTACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTTACTCCGCCATGCTCTaGATTCTGAGCATCTCCATC +
Preference number: 3 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRYSAML*ILSISI
Trigger: GATGGAGATGCTCAGAATCAAGAGCATGGCGGAGTA...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 72 bp CTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTaGAGGATGGATGAACAGATGCACTGTCCCTTCTGT +
Preference number: 3 (lower is better)
Translates to: LSQAPWSSTWAK*RMDEQMHCPFC
Trigger: ACAGAAGGGACAGTGCATCTGTTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp AGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATaGATGAACAGATGCACTGTCCCTTCTGTCCCAACT +
Preference number: 3 (lower is better)
Translates to: RHHGVQRGPSAG*MNRCTVPSVPT
Trigger: AGTTGGGACAGAAGGGACAGTGCATCTGTTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp AGTGCACAGGTAGTAAGTGGCCATTGTCCCCAGCCGTaGGAGTGGAGAGGATGGCTAGGATTATCTCTGGAA +
Preference number: 3 (lower is better)
Translates to: SAQVVSGHCPQP*EWRGWLGLSLE
Trigger: TTCCAGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTTACTACCTGTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTAGGTCTGCTGAACACTaGAAACTTCACCAGGCAGTG +
Preference number: 3 (lower is better)
Translates to: KWPLSPAVGVERMARIISRSAEH*KLHQAV
Trigger: CACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCT...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTGGGTGCTCACTTTCCTaGGGTTTCTTTCTCCAGAGT +
Preference number: 3 (lower is better)
Translates to: KWPLSPAVGVERMARIISGCSLS*GFFLQS
Trigger: ACTCTGGAGAAAGAAACCCAAGGAAAGTGAGCACCC...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCAAGTGCTGTCGAGGAGTaGCAGCTCCACGGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPSAVEE*QLHGGH
Trigger: ATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACT...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp ACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATaGACAGATGCACTGTCCCTTCTGTCCCAACTGTGT +
Preference number: 3 (lower is better)
Translates to: TMEFNVGQVQDG*TDALSLLSQLC
Trigger: ACACAGTTGGGACAGAAGGGACAGTGCATCTGTTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp AGGGTAGCACTATTCTCCGGAAGACCAACGGGAACATaGGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTC +
Preference number: 3 (lower is better)
Translates to: RVALFSGRPTGT*GCQTARSPSWL
Trigger: GAGCCAACTGGGACTTCTGGCTGTTTGACATCCTCATGTTCCCGTTGGTCTTCCGGAGAATAGTGCTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp ACGAGGCCAGCCAGGCATTTTCCACAGCAAGTGCCATaGGAAGGAGGTGGGCAAAGTCCTAAGAGAAACCAT +
Preference number: 3 (lower is better)
Translates to: TRPARHFPQQVP*EGGGQSPKRNH
Trigger: ATGGTTTCTCTTAGGACTTTGCCCACCTCCTTCTCATGGCACTTGCTGTGGAAAATGCCTGGCTGGCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 72 bp ACCTGCCTTTCCTCCGCCTCACCTCCAGTTTGCAGCTaGCATCAAACTGCACACAACAAACTGCTGCAGATA +
Preference number: 3 (lower is better)
Translates to: TCLSSASPPVCS*HQTAHNKLLQI
Trigger: TATCTGCAGCAGTTTGTTGTGTGCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGCGGAGGAAAGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGATCCTGTACCAAGTCCTaGGGCCAAGGGTTGTGGTTA +
Preference number: 3 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRSCTKS*GQGLWL
Trigger: TAACCACAACCCTTGGCCCAAGGACTTGGTACAGGA...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCAGGTCTGCTGAACACTaGAAACTTCACCAGGCAGTG +
Preference number: 3 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGRSAEH*KLHQAV
Trigger: CACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCT...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAAGAAGGGGTCTGCTCATaGACTAGGCTTATAGAGGTG +
Preference number: 3 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDEEGVCS*TRLIEV
Trigger: CACCTCTATAAGCCTAGTCAATGAGCAGACCCCTTC...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCAGGGGAGACTGCCCCCTaGCAGAAGGTATATGAGAGC +
Preference number: 3 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPGETAP*QKVYES
Trigger: GCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCCC...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTGTCCCAACTGTGTGGTaGAAATCCCTATGTCTTCTC +
Preference number: 3 (lower is better)
Translates to: KWPLSPAVGVERMARIISVPTVW*KSLCLL
Trigger: GAGAAGACATAGGGATTTCAACCACACAGTTGGGAC...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCGGGTCTAAGGAAACTTaGAAGTGCCTCACCTGGAAT +
Preference number: 3 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGGSKET*KCLTWN
Trigger: ATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACCC...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 72 bp ATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTaGTCACTTTCCTTGGGTTTCTTTCTCCAGAGTGGC +
Preference number: 3 (lower is better)
Translates to: IFRTRVSWHPVG*SLSLGFFLQSG
Trigger: GCCACTCTGGAGAAAGAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp GCACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTaGGTGCTCACTTTCCTTGGGTTTCTTTCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: AHFQNPGVLASS*VLTFLGFLSPE
Trigger: CTCTGGAGAAAGAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATCCTGTACCAAGTCCTaGGGCCAAGGGTTGTGGTTA +
Preference number: 3 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPSCTKS*GQGLWL
Trigger: TAACCACAACCCTTGGCCCAAGGACTTGGTACAGGA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp ACAGATGCACTGTCCCTTCTGTCCCAACTGTGTGGTTaGAATCCCTATGTCTTCTCACCTTTATGGCCGAGG +
Preference number: 3 (lower is better)
Translates to: TDALSLLSQLCG*NPYVFSPLWPR
Trigger: CCTCGGCCATAAAGGTGAGAAGACATAGGGATTTCAACCACACAGTTGGGACAGAAGGGACAGTGCATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp TTAACTAGTCTCTCTCAGGCACCATGGAGTTCAACGTaGGCCAAGTGCAGGATGGATGAACAGATGCACTGT +
Preference number: 3 (lower is better)
Translates to: LTSLSQAPWSST*AKCRMDEQMHC
Trigger: ACAGTGCATCTGTTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACTAGTTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp TGCTCATTGACTAGGCTTATAGAGGTGGTAGTCAGTTaGCTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCT +
Preference number: 3 (lower is better)
Translates to: CSLTRLIEVVVS*LQGKMASGLGA
Trigger: AGCACCAAGACCTGAAGCCATCTTCCCTTGGAGTCAACTGACTACCACCTCTATAAGCCTAGTCAATGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp GAGGTCTCTGTTCTACATCAGCTGATCTGCTTCCAGTaGGACTATCAAACTCAGTGCTGTCGAGGAGTTGCA +
Preference number: 3 (lower is better)
Translates to: EVSVLHQLICFQ*DYQTQCCRGVA
Trigger: TGCAACTCCTCGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACAGAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp ACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATaGGGGCCCACTTCTACAAATGGGGCATTATTTACC +
Preference number: 3 (lower is better)
Translates to: TLLWPIWKLPQS*GPTSTNGALFT
Trigger: GGTAAATAATGCCCCATTTGTAGAAGTGGGCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp ATTCCAAGTAAACCCGACATGGAATTTCAAACACAATaGGCTGCCAATGGAGGGAACCTGTCTGTGGCTCCA +
Preference number: 3 (lower is better)
Translates to: IPSKPDMEFQTQ*AANGGNLSVAP
Trigger: TGGAGCCACAGACAGGTTCCCTCCATTGGCAGCCCATTGTGTTTGAAATTCCATGTCGGGTTTACTTGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGGTAAGGGAAAGAAGCTaGTTCATGGCTTGTTTTGTA +
Preference number: 3 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWVRERS*FMACFV
Trigger: TACAAAACAAGCCATGAACAAGCTTCTTTCCCTTAC...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGGGGTGCTCACTTTCCTaGGGTTTCTTTCTCCAGAGT +
Preference number: 3 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSGCSLS*GFFLQS
Trigger: ACTCTGGAGAAAGAAACCCAAGGAAAGTGAGCACCC...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTACTCCGCCATGCTCTaGATTCTGAGCATCTCCATC +
Preference number: 3 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSYSAML*ILSISI
Trigger: GATGGAGATGCTCAGAATCAAGAGCATGGCGGAGTA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGAGGTCTGCTGAACACTaGAAACTTCACCAGGCAGTG +
Preference number: 3 (lower is better)
Translates to: LQGKMASGLGAVLVITVLRSAEH*KLHQAV
Trigger: CACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCT...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp TTGGGTTTCTTTCTCCAGAGTGGCCAGGCCACCTGCTaGGGATATTCTAGTTTGCATAGTGACCTGATTTGT +
Preference number: 3 (lower is better)
Translates to: LGFFLQSGQATC*GYSSLHSDLIC
Trigger: ACAAATCAGGTCACTATGCAAACTAGAATATCCTCAGCAGGTGGCCTGGCCACTCTGGAGAAAGAAACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp TCACCTTTATGGCCGAGGTCTCTGTTCTACATCAGCTaGTCTGCTTCCAGTGAGACTATCAAACTCAGTGCT +
Preference number: 3 (lower is better)
Translates to: SPLWPRSLFYIS*SASSETIKLSA
Trigger: AGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACAGAGACCTCGGCCATAAAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp ATGAACAGATGCACTGTCCCTTCTGTCCCAACTGTGTaGTTGAAATCCCTATGTCTTCTCACCTTTATGGCC +
Preference number: 3 (lower is better)
Translates to: MNRCTVPSVPTV*LKSLCLLTFMA
Trigger: GGCCATAAAGGTGAGAAGACATAGGGATTTCAACCACACAGTTGGGACAGAAGGGACAGTGCATCTGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCAGAACCCGGGTGTCTaGGCATCCAGTTGGGTGCTC +
Preference number: 3 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHQNPGV*ASSWVL
Trigger: GAGCACCCAACTGGATGCCAAGACACCCGGGTTCTG...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATAGTGCTGTCGAGGAGTaGCAGCTCCACGGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHSAVEE*QLHGGH
Trigger: ATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACT...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGGTCCCAACTGTGTGGTaGAAATCCCTATGTCTTCTC +
Preference number: 3 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMVPTVW*KSLCLL
Trigger: GAGAAGACATAGGGATTTCAACCACACAGTTGGGAC...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp CAACAATATTCCAGATATGTTACCAGAGAGGTCTGCTaGACACTTGAAACTTCACCAGGCAGTGAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: QQYSRYVTREVC*TLETSPGSEPR
Trigger: TCTGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACATATCTGGAATATTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATGGGGAGACTGCCCCCTaGCAGAAGGTATATGAGAGC +
Preference number: 3 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHGETAP*QKVYES
Trigger: GCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCCC...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp TGGAGTTTTCTGGATGGTGTCCACATTAGGTTACTTTaGCGTGTCAGTGTATTCGTATCAGAGAGGCACCAA +
Preference number: 3 (lower is better)
Translates to: WSFLDGVHIRLL*RVSVFVSERHQ
Trigger: TTGGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACACCATCCAGAAAACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAATCCTGTACCAAGTCCTaGGGCCAAGGGTTGTGGTTA +
Preference number: 3 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKSCTKS*GQGLWL
Trigger: TAACCACAACCCTTGGCCCAAGGACTTGGTACAGGA...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp GAAGCTACCTCAGTCATGAGGGCCCACTTCTACAAATaGGGCATTATTTACCCATTTCATTTATGGGGAAAT +
Preference number: 3 (lower is better)
Translates to: EATSVMRAHFYK*GIIYPFHLWGN
Trigger: ATTTCCCCATAAATGAAATGGGTAAATAATGCCCCATTTGTAGAAGTGGGCCCTCATGACTGAGGTAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 72 bp AACCTAGTACTACTTTTACAAATACTGGAAGGGGTCTaGTCATTGACTAGGCTTATAGAGGTGGTAGTCAGT +
Preference number: 3 (lower is better)
Translates to: NLVLLLQILEGV*SLTRLIEVVVS
Trigger: ACTGACTACCACCTCTATAAGCCTAGTCAATGAGCAGACCCCTTCCAGTATTTGTAAAAGTAGTACTAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR GCA 72 bp CCTCTTAACACTATAGGGTCTAAGGAAACTTTGAAGTaGCTCACCTGGAATGTTCTCTCTTATCCTTCCTTT +
Preference number: 3 (lower is better)
Translates to: PLNTIGSKETLK*LTWNVLSYPSF
Trigger: AAAGGAAGGATAAGAGAGAACATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACCCTATAGTGTTAAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR-3UTR CAA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATGGGTCTAAGGAAACTTaGAAGTGCCTCACCTGGAAT +
Preference number: 3 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHGSKET*KCLTWN
Trigger: ATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACCC...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CCA 72 bp TTATTTACCCATTTCATTTATGGGGAAATGAGTTCATaGGAGATGAAAGCTTACCAGAGGCTCAACAGCAGA +
Preference number: 3 (lower is better)
Translates to: LFTHFIYGEMSS*EMKAYQRLNSR
Trigger: TCTGCTGTTGAGCCTCTGGTAAGCTTTCATCTCCCATGAACTCATTTCCCCATAAATGAAATGGGTAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR TCA 72 bp CTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTaGGATCTTCAGGCATCACTCGTTTCACGACAATGG +
Preference number: 3 (lower is better)
Translates to: LNKKLHRRFKHH*DLQASLVSRQW
Trigger: CCATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGCCCCCTCCTAGCCTaGGCCGGTGAGGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGRPLLA*AGEEAA
Trigger: CGCTGCCTCCTCACCGGCGCAGGCTAGGAGGGGGCG...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423968.7
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCCGCGGGAGCCCGCGATaGGGGCAAAACGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLRGSPR*GQNATH
Trigger: GTGCGTGGCGTTTTGCCCCCATCGCGGGCTCCCGCG...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000464896.5
CDS-3UTR TCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCACCTAGCCTGCGCCGGTaGGGAGGCAGCGTCGCGCCC +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPPSLRR*GGSVAP
Trigger: GGGCGCGACGCTGCCTCCTCACCGGCGCAGGCTAGG...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423968.7
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGAGGGGTCCCGAGGGCTaGCCAGGCCACCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRRGPEG*PGHRHC
Trigger: ACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCAGGGGTCCCGAGGGCTaGCCAGGCCACCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGRGPEG*PGHRHC
Trigger: ACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCATGAAAGGGTCTCTCTaGGCGGCGCGCAGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLMKGSL*AARRPS
Trigger: GGAGGGCCTGCGCGCCGCTCAGAGAGACCCTTTCAT...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464896.5
CDS-3UTR CCA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGCCCGGGTCAGATCCGTaGTGCCGGGGAGCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQPGSDP*CRGAGF
Trigger: AAAGCCAGCTCCCCGGCACCACGGATCTGACCCGGG...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000289104.8
CDS-3UTR CCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAAGGGGTCCCGAGGGCTaGCCAGGCCACCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASRGPEG*PGHRHC
Trigger: ACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGTGGGGAGGTTGTCACTaGGGACGGCGCTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQWGGCH*GRRWLP
Trigger: TGGCAACCAGCGCCGTCCCCAGTGACAACCTCCCCA...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTGGGGAGGTTGTCACTaGGGACGGCGCTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAWGGCH*GRRWLP
Trigger: TGGCAACCAGCGCCGTCCCCAGTGACAACCTCCCCA...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGGTTTGTGGGTGCCTGTaGCCCGGTCTCCCCGCCATT +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRVCGCL*PGLPAI
Trigger: AATGGCGGGGAGACCGGGCCACAGGCACCCACAAAC...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGAGGGGTCCCGAGGGCTaGCCAGGCCACCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRRGPEG*PGHRHC
Trigger: ACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCCTTCGTTGGGATGGATaGGACGGGGACAGGCGACAC +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQALRWDG*DGDRRH
Trigger: GTGTCGCCTGTCCCCGTCGCATCCATCCCAACGAAG...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR GCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCGGGTCAGATCCGTGGTaGCGGGGAGCTGGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLGSDPW*RGAGFK
Trigger: CTTAAAGCCAGCTCCCCGGCACCACGGATCTGACCC...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR GCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCGGGTCAGATCCGTGGTaGCGGGGAGCTGGCTTTAAG +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGGSDPW*RGAGFK
Trigger: CTTAAAGCCAGCTCCCCGGCACCACGGATCTGACCC...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR GCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTGGAAGCCATCCCCCGTaGGCATGTATTGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPGSHPP*ACIAPA
Trigger: TGCGGGAGCAATACATGCGCACGGGGGATGGCTTCC...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCGGAAGCCATCCCCCGTaGGCATGTATTGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLGSHPP*ACIAPA
Trigger: TGCGGGAGCAATACATGCGCACGGGGGATGGCTTCC...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCATTGCAGTTTGTGGGTaGCTGTGGCCCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAIAVCG*LWPGLP
Trigger: GGGGAGACCGGGCCACAGGCACCCACAAACTGCAAT...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGTGGGAAAGCCCGTaGCCTCTGGGCAAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLRWESP*PLGKAR
Trigger: TCTGGCTTTGCCCAGAGGGCACGGGCTTTCCCACCT...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTGTGCTGTCGAGGAGTTaGAGCTCCACGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPVLSRS*SSTVGM
Trigger: CATGCCCACCGTGGAGCTGCAACTCCTCGACAGCAC...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCACGCGCAGGATAAGCTaGTGGAAGCGGTCCACGTGC +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLTRRIS*WKRSTC
Trigger: GCACGTGGACCGCTTCCACCAGCTTATCCTGCGCGT...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGTTCAGTGCAGTTAGGTaGGGAGGGGTCCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRFSAVR*GGVPRA
Trigger: AGCCCTCGGGACCCCTCCCCACCTAACTGCACTGAA...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGTTGGCTCCTCGGTCATaGTGTGGCGTGGCCAACCAG +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRLAPRS*CGVANQ
Trigger: CTGGTTGGCCACGCCACACCATGACCGAGGAGCCAA...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGGGGACGGCGCTGGTTaGCATGTTTCTCGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAGDGAG*HVSRRS
Trigger: TGACCTACGAGAAACATGGCAACCAGCGCCGTCCCC...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR GCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGCGCTGAATTCCTCCTaGCCAGCTGTGTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAALNSS*PAVSRT
Trigger: CGTTCTGGACACAGCTGGGCAGGAGGAATTCAGCGC...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
ENST00000621127.4
CDS-3UTR GCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAATTGCAGTTTGTGGGTaGCTGTGGCCCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASIAVCG*LWPGLP
Trigger: GGGGAGACCGGGCCACAGGCACCCACAAACTGCAAT...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTATTGCAGTTTGTGGGTaGCTGTGGCCCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPIAVCG*LWPGLP
Trigger: GGGGAGACCGGGCCACAGGCACCCACAAACTGCAAT...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGGGAGCTGGGGAGACTaGCCCCTTGCAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAGSWGD*PLAEGI
Trigger: TATACCTTCTGCAAGGGGGCAGTCTCCCCAGCTCCC...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCCAAACTTCGTTGGGATaGATGCGACGGGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAQTSLG*MRRGQA
Trigger: CGCCTGTCCCCGTCGCATCCATCCCAACGAAGTTTG...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCATTCAGTGCAGTTAGGTaGGGAGGGGTCCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASFSAVR*GGVPRA
Trigger: AGCCCTCGGGACCCCTCCCCACCTAACTGCACTGAA...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGGGGCCAGGGGCACTTaGATGCTGCTTCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQGARGT*MLLLLT
Trigger: TGTAAGCAGAAGCAGCATCCAAGTGCCCCTGGCCCC...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGCTCCACGGTGGGCATaGGGTATGCTCGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAAPRWA*GMLVVV
Trigger: AACCACTACGAGCATACCCCATGCCCACCGTGGAGC...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGGGTCATGGTGTGGCGTaGCCAACCAGGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRGHGVA*PTRFPS
Trigger: ACTGGGAAACCTGGTTGGCCACGCCACACCATGACC...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCGGTCATGGTGTGGCGTaGCCAACCAGGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAGHGVA*PTRFPS
Trigger: ACTGGGAAACCTGGTTGGCCACGCCACACCATGACC...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCTCCTCGGTCATGGTGTaGCGTGGCCAACCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGSSVMV*RGQPGF
Trigger: GAAACCTGGTTGGCCACGCCACACCATGACCGAGGA...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTTCCTCGGTCATGGTGTaGCGTGGCCAACCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPSSVMV*RGQPGF
Trigger: GAAACCTGGTTGGCCACGCCACACCATGACCGAGGA...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCGCCAGAAGTCCCAGTTaGCTCCTCGGTCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLARSPS*LLGHGV
Trigger: CACACCATGACCGAGGAGCCAACTGGGACTTCTGGC...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCCATTGTCCCCAGCCGTaGGAGTGGAGAGGATGGCTA +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLHCPQP*EWRGWL
Trigger: TAGCCATCCTCTCCACTCCCACGGCTGGGGACAATG...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGGAGGATCATCGGGAATaGCTCCCTGTCTTTGACGCG +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLREDHRE*LPVFDA
Trigger: CGCGTCAAAGACAGGGAGTCATTCCCGATGATCCTC...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTGAGGATCATCGGGAATaGCTCCCTGTCTTTGACGCG +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPEDHRE*LPVFDA
Trigger: CGCGTCAAAGACAGGGAGTCATTCCCGATGATCCTC...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCTTTGTCGACATTaGGAGGTGGGTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLRLCRH*EVGPWH
Trigger: GTGCCAAGGACCCACCTCTCAATGTCGACAAAGCCT...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGAGGCTTTGTCGACATTaGGAGGTGGGTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRRLCRH*EVGPWH
Trigger: GTGCCAAGGACCCACCTCTCAATGTCGACAAAGCCT...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTGCTTCCTTGTCTCTTTaGGAGGTGGGAAAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPASLSL*EVGKPV
Trigger: CACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGC...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGTGTCTCCTGGAAAAGTaGGACAGGCCCCACGAGGCC +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRCLLEK*DRPHEA
Trigger: GGCCTCGTGGGGCCTGTCTCACTTTTCCAGGAGACA...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCGCTGTGTCCAGAACATaGAAGGGTCTCTCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLAVSRT*KGLSER
Trigger: CCGCTCAGAGAGACCCTTTCATGTTCTGGACACAGC...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464896.5
CDS-3UTR GCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCTTCGTTGGGATGGATaGGACGGGGACAGGCGACAC +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGLRWDG*DGDRRH
Trigger: GTGTCGCCTGTCCCCGTCGCATCCATCCCAACGAAG...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR GCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGAGGTGGGAAAGCCCGTaGCCTCTGGGCAAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRRWESP*PLGKAR
Trigger: TCTGGCTTTGCCCAGAGGGCACGGGCTTTCCCACCT...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCGGGGCACTTGGATGCTaGTTCTGCTTACAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGGALGC*FCLQVA
Trigger: AGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCC...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGCCAGGGGCACTTGGATaGTGCTTCTGCTTACAGGTG +
Preference number: 4 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQPGALG*CFCLQV
Trigger: CACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCTGG...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCGGGAGACTGCCCCCTTaGAGAAGGTATATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLGRLPP*RRYMRA
Trigger: GGCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCC...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCGGACACTGCCCTGTGTaGAGGGCTTCTTCTCCTACT +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAGHCPV*RASSPT
Trigger: AGTAGGAGAAGAAGCCCTGCACACAGGGCAGTGTCC...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGTGCTGTCGAGGAGTTaGAGCTCCACGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRVLSRS*SSTVGM
Trigger: CATGCCCACCGTGGAGCTGCAACTCCTCGACAGCAC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCGCTGAATTCCTCCTaGCCAGCTGTGTCCAGAACA +
Preference number: 4 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQALNSS*PAVSRT
Trigger: TGTTCTGGACACAGCTGGGCAGGAGGAATTCAGCGC...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464896.5
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGACGCGCAGGATAAGCTaGTGGAAGCGGTCCACGTGC +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRTRRIS*WKRSTC
Trigger: GCACGTGGACCGCTTCCACCAGCTTATCCTGCGCGT...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTTGTCTCTTTGAGAGGTaGGAAAGCCCGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPCLFER*ESPCPL
Trigger: CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACA...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCTGTCTCTTTGAGAGGTaGGAAAGCCCGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGCLFER*ESPCPL
Trigger: CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACA...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCCAGGTTTGACCCATaGCCTGAGGCCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGPRFDP*PEASSY
Trigger: GTAGCTGGAGGCCTCAGGCCATGGGTCAAACCTGGG...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCATCATCAGGGAGCTaGGGAGACTGCCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRASSGS*GDCPLA
Trigger: TGCAAGGGGGCAGTCTCCCCAGCTCCCTGATGATGC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCTTTCTTTCTCCAGAGTaGCCAGGCCACCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLFLSPE*PGHLLR
Trigger: CCTCAGCAGGTGGCCTGGCCACTCTGGAGAAAGAAA...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCACTGGGGTCTTGGTCGTaGCCGATTTCACGAACGCAC +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASLGSWS*PISRTH
Trigger: GTGCGTTCGTGAAATCGGCCACGACCAAGACCCCAG...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464896.5
CDS-3UTR TCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGCTTCCTTGTCTCTTTaGGAGGTGGGAAAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASASLSL*EVGKPV
Trigger: CACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGC...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCGCAGCACAGCTGATGTaGAAACGCAGCAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAAAQLM*KRSKRQ
Trigger: CTGTCTCTTGCTGCGTTTTCACATCAGCTGTGCTGC...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGAGGTGGTAGTCAGTTaGCTCCAAGGGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAEVVVS*LQGKMA
Trigger: AGCCATCTTCCCTTGGAGTCAACTGACTACCACCTC...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGGGCCAGGCCACCTGCTaGGGATATTCTAGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRGQATC*GYSSLH
Trigger: ATGCAAACTAGAATATCCTCAGCAGGTGGCCTGGCC...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGGAGACTGCCCCCTTaGAGAAGGTATATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASGRLPP*RRYMRA
Trigger: GGCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCC...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGTCCCGAGTGGCAAAGTaGACAGGTAGTAAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRSRVAK*TGSKWP
Trigger: TGGCCACTTACTACCTGTGCACTTTGCCACTCGGGA...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCGCCAGATCAGTTCAATaGATGAGCCCAGGCCCTAGT +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLARSVQ*MSPGPS
Trigger: ACTAGGGCCTGGGCTCATGCATTGAACTGATCTGGC...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474559.1
CDS-3UTR CCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCACCACCAGCTTGTATGTaGGGAGGTTGTCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASPPACM*GGCHWG
Trigger: TCCCCAGTGACAACCTCCCCACATACAAGCTGGTGG...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CCA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTACACATTGCAGTTTGTaGGTGCCTGTGGCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPTHCSL*VPVARS
Trigger: AGACCGGGCCACAGGCACCCACAAACTGCAATGTGT...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCGACTCCAAGGGAAGATaGCTTCAGGTCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLDSKGR*LQVLVL
Trigger: CAGCACCAAGACCTGAAGCCATCTTCCCTTGGAGTC...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGCATCATCAGGGAGCTaGGGAGACTGCCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPASSGS*GDCPLA
Trigger: TGCAAGGGGGCAGTCTCCCCAGCTCCCTGATGATGC...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCCACTCCCACCCCAGCTaGAAAAACTCCAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAHSHPS*KNSSLW
Trigger: CCAAAGACTGGAGTTTTTCCAGCTGGGGTGGGAGTG...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCGGGCCAAGTGCAGGATaGATGAACAGATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLGPSAG*MNRCTV
Trigger: GACAGTGCATCTGTTCATCCATCCTGCACTTGGCCC...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGGTCATGGTGTGGCGTaGCCAACCAGGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRGHGVA*PTRFPS
Trigger: ACTGGGAAACCTGGTTGGCCACGCCACACCATGACC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGTCCTCGGTCATGGTGTaGCGTGGCCAACCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGSSVMV*RGQPGF
Trigger: GAAACCTGGTTGGCCACGCCACACCATGACCGAGGA...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCAGAAGTCCCAGTTaGCTCCTCGGTCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRARSPS*LLGHGV
Trigger: CACACCATGACCGAGGAGCCAACTGGGACTTCTGGC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCCCAGCCGTGGGAGTaGAGAGGATGGCTAGGATTA +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGPQPWE*RGWLGL
Trigger: TAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGG...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGTCCCCACTGGGGTCTTaGTCGTGGCCGATTTCACGA +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRSPLGS*SWPISR
Trigger: TCGTGAAATCGGCCACGACCAAGACCCCAGTGGGGA...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000464896.5
CDS-3UTR TCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCTTCCTTGCTCCCTGGTaGTCTTCCTCAAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLFLAPW*SSSSAS
Trigger: TGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAA...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCACCAAGCAGCACAGCTaGTGTGAAAACGCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQATKQHS*CENAAR
Trigger: TCTTGCTGCGTTTTCACATCAGCTGTGCTGCTTGGT...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCACCAAGCAGCACAGCTaGTGTGAAAACGCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRATKQHS*CENAAR
Trigger: TCTTGCTGCGTTTTCACATCAGCTGTGCTGCTTGGT...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTGAGGTGGTAGTCAGTTaGCTCCAAGGGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPEVVVS*LQGKMA
Trigger: AGCCATCTTCCCTTGGAGTCAACTGACTACCACCTC...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTTGCAGAAGGTATATaGGAGCCACACATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGLAEGI*EPHISP
Trigger: TGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAG...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCTTGCAGAAGGTATATaGGAGCCACACATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPLAEGI*EPHISP
Trigger: TGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAG...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCAAGTGCAGGATGGATaGACAGATGCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRQVQDG*TDALSL
Trigger: AAGGGACAGTGCATCTGTTCATCCATCCTGCACTTG...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGACCAACGGGAACATaGGGATGTCAAACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLRPTGT*GCQTAR
Trigger: TCTGGCTGTTTGACATCCTCATGTTCCCGTTGGTCT...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCACCTGTTAAGACTATaGAACAGAAGCTGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPHLLRL*NRSWAL
Trigger: GAGCGCCCAGCTTCTGTTTCATAGTCTTAACAGGTG...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTTGGATGCTGCTTCTaGTTACAGGTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGLGCCF*LQVASL
Trigger: CAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAG...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCTTGGATGCTGCTTCTaGTTACAGGTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPLGCCF*LQVASL
Trigger: CAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAG...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGGGGCACTTGGATGCTaGTTCTGCTTACAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRGALGC*FCLQVA
Trigger: AGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGGGGGCACTTGGATGCTaGTTCTGCTTACAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGGALGC*FCLQVA
Trigger: AGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCC...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCATTACTCCTTCCTACCTaGCTTTCCTCCGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASLLLPT*LSSASP
Trigger: AGGTGAGGCGGAGGAAAGGCAGGTAGGAAGGAGTAA...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTCAAACACAATGGGCTaGCAATGGAGGGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQASNTMG*QWREPV
Trigger: GACAGGTTCCCTCCATTGGCAGCCCATTGTGTTTGA...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGCCACCAGCTTGTATGTaGGGAGGTTGTCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRPPACM*GGCHWG
Trigger: TCCCCAGTGACAACCTCCCCACATACAAGCTGGTGG...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGTCAAATCGACCTTGTTaGCCACGAGGATCATCGGGA +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRSNRPC*PRGSSG
Trigger: TCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGA...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGACACATTGCAGTTTGTaGGTGCCTGTGGCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGTHCSL*VPVARS
Trigger: AGACCGGGCCACAGGCACCCACAAACTGCAATGTGT...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGACACATTGCAGTTTGTaGGTGCCTGTGGCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRTHCSL*VPVARS
Trigger: AGACCGGGCCACAGGCACCCACAAACTGCAATGTGT...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCCTCAGACATTGTGGATaGGGGGTAAGGGAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRALRHCG*GVRERS
Trigger: GCTTCTTTCCCTTACCCCCCATCCACAATGTCTGAG...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCCTCAGACATTGTGGATaGGGGGTAAGGGAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQALRHCG*GVRERS
Trigger: GCTTCTTTCCCTTACCCCCCATCCACAATGTCTGAG...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTATGCTCGTAGTGGTTaGTGCCCAGCAGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAYARSG*CPAGVF
Trigger: GAAAACTCCTGCTGGGCACCAACCACTACGAGCATA...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCACAATGGCAAAGGCATaGGGTGAGGGCATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGTMAKA*GEGISG
Trigger: TCCTGAAATGCCCTCACCCCATGCCTTTGCCATTGT...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCATCTGAGAGCACACAATaGCAAAGGCATGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASSESTQ*QRHGVR
Trigger: CCTCACCCCATGCCTTTGCCATTGTGTGCTCTCAGA...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAAGGCTTTGTCGACATTaGGAGGTGGGTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPRLCRH*EVGPWH
Trigger: GTGCCAAGGACCCACCTCTCAATGTCGACAAAGCCT...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAAACTTCACCAGGCAGTaGGCCCAGACCCCTTTAATA +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASNFTRQ*AQTPLI
Trigger: TATTAAAGGGGTCTGGGCTCACTGCCTGGTGAAGTT...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCACCAGAGAGGTCTGCTaGACACTTGAAACTTCACCA +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGTREVC*TLETSP
Trigger: TGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGT...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGGGTCTAAGGAAACTTTaGAGTGCCTCACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRGLRKL*SASPGM
Trigger: CATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACC...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCGCCATTTCTTTTCCTTaGTCCCTGGTGATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLAISFP*SLVIFL
Trigger: GAGGAAGATCACCAGGGAGCAAGGAAAAGAAATGGC...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGCCATTTCTTTTCCTTaGTCCCTGGTGATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAAISFP*SLVIFL
Trigger: GAGGAAGATCACCAGGGAGCAAGGAAAAGAAATGGC...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCACAAGATCACACATTaGAGTTTGTGGGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGHKITH*SLWVPV
Trigger: CACAGGCACCCACAAACTGCAATGTGTGATCTTGTG...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGAGACTGCCCCCTTaGAGAAGGTATATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPGRLPP*RRYMRA
Trigger: GGCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCC...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCTGCACACAACAAACTaGTGCAGATACCACTTAGGG +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPLHTTN*CRYHLG
Trigger: CCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTGCAG...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGTGGCTTGTCACTTTGTaGTCTTGTCTTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGWLVTL*SCLPRR
Trigger: CCTGCGGGGAAGACAAGAGCACAAAGTGACAAGCCA...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474559.1
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGAGGAGTCTTCAATGGTaGGGTCATAGTCAGGCACAA +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRRSLQW*GHSQAQ
Trigger: TTGTGCCTGACTATGACCCCACCATTGAAGACTCCT...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCGCTTCTGCTTACAGGTaGCTTCCTTGTCTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGASAYR*LPCLFE
Trigger: CTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGC...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCGCTTCTGCTTACAGGTaGCTTCCTTGTCTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAASAYR*LPCLFE
Trigger: CTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGC...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCACTCCCACCCCAGCTaGAAAAACTCCAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGHSHPS*KNSSLW
Trigger: CCAAAGACTGGAGTTTTTCCAGCTGGGGTGGGAGTG...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCATTTCTTTCTCCAGAGTaGCCAGGCCACCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPFLSPE*PGHLLR
Trigger: CCTCAGCAGGTGGCCTGGCCACTCTGGAGAAAGAAA...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAAGAACCCGGGTGTCTTaGCATCCAGTTGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPRTRVS*HPVGCS
Trigger: TGAGCACCCAACTGGATGCCAAGACACCCGGGTTCT...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCGTCTTCTCACCTTTATaGCCGAGGTCTCTGTTCTAC +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGVFSPL*PRSLFY
Trigger: GTAGAACAGAGACCTCGGCCATAAAGGTGAGAAGAC...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCATGGAGTTCAACGTaGGCCAAGTGCAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGPWSST*AKCRMD
Trigger: ATCCATCCTGCACTTGGCCCACGTTGAACTCCATGG...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCTGTCTGAGGGGCCTTTaGGTTAAAGTTGCCACGTTA +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGCLRGL*VKVATL
Trigger: TAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCTCCAAGATGGCCCATTaGTTGTCAATCTCCGTATGT +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGSKMAH*LSISVC
Trigger: ACATACGGAGATTGACAATCAATGGGCCATCTTGGA...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR TCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGCACCTGTTAAGACTATaGAACAGAAGCTGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRHLLRL*NRSWAL
Trigger: GAGCGCCCAGCTTCTGTTTCATAGTCTTAACAGGTG...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGTTCAAACATCACTaGGATCTTCAGGCATCACTC +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLRFKHH*DLQASL
Trigger: GAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCT...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCAGGTTCAAACATCACTaGGATCTTCAGGCATCACTC +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGRFKHH*DLQASL
Trigger: GAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCT...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGATCAGTTCAATGCATaGGCCCAGGCCCTAGTTGTG +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPDQFNA*AQALVV
Trigger: CACAACTAGGGCCTGGGCTCATGCATTGAACTGATC...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474559.1
CDS-3UTR GCA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTGCCATTTCTTTTCCTTaGTCCCTGGTGATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPAISFP*SLVIFL
Trigger: GAGGAAGATCACCAGGGAGCAAGGAAAAGAAATGGC...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCCACACAACAAACTGCTaGAGATACCACTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAHTTNC*RYHLGK
Trigger: CTTCCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTG...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCACAGCTGCCATCAAACTaGACACAACAAACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASQLPSN*TQQTAA
Trigger: TGCAGCAGTTTGTTGTGTGCAGTTTGATGGCAGCTG...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCCAGTTTGCAGCTaGCATCAAACTGCACACAAC +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGPPVCS*HQTAHN
Trigger: GTTGTGTGCAGTTTGATGGCAGCTGCAAACTGGAGG...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGCCTCACCTCCAGTTTaGAGCTGCCATCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPASPPV*SCHQTA
Trigger: TGCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGC...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCGTGGGTCCTTGGCACTaGTTTCTATGTACGGAATAT +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAVGPWH*FLCTEY
Trigger: ATATTCCGTACATAGAAACCAGTGCCAAGGACCCAC...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCGTGGGTCCTTGGCACTaGTTTCTATGTACGGAATAT +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGVGPWH*FLCTEY
Trigger: ATATTCCGTACATAGAAACCAGTGCCAAGGACCCAC...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGACTCTAACGAGGTCATaGAAGGCTTTGTCGACATTG +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRTLTRS*KALSTL
Trigger: CAATGTCGACAAAGCCTTCCATGACCTCGTTAGAGT...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCGGTCTCCCCGCCATTTaGTTTTCTTCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLGLPAI*FSSSSS
Trigger: AGAAGAAGAAGAAGAAAACCAAATGGCGGGGAGACC...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTTGGGCCAAGGGTTGTaGTTAGAAATGGTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQALGQGL*LEMVSV
Trigger: CACTGAAACCATTTCTAACCACAACCCTTGGCCCAA...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGAGATCCAGCATGAACTaGAGTTTTCTGGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRRSSMN*SFLDGV
Trigger: GACACCATCCAGAAAACTCCAGTTCATGCTGGATCT...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGACTCCAAGGGAAGATaGCTTCAGGTCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPDSKGR*LQVLVL
Trigger: CAGCACCAAGACCTGAAGCCATCTTCCCTTGGAGTC...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCGGGGAAATGAGTTCATaGGAGATGAAAGCTTACCAG +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAGEMSS*EMKAYQ
Trigger: CTGGTAAGCTTTCATCTCCCATGAACTCATTTCCCC...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTCTCTACACTCTACTCTaGCCTATCTGGAAGCTACCT +
Preference number: 4 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPLYTLL*PIWKLP
Trigger: AGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAG...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGAGGGTGTCAAACAGTaGAAGAAATCTGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAEGVKQ*KKSEST
Trigger: TGTGCTCTCAGATTTCTTCCACTGTTTGACACCCTC...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGAATTTCAAACACAATaGGCTGCCAATGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQEFQTQ*AANGGN
Trigger: GTTCCCTCCATTGGCAGCCCATTGTGTTTGAAATTC...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCGAATTTCAAACACAATaGGCTGCCAATGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGEFQTQ*AANGGN
Trigger: GTTCCCTCCATTGGCAGCCCATTGTGTTTGAAATTC...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCCTCGTTTCACGACAATaGCCACCTGTTAAGACTATG +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLLVSRQ*PPVKTM
Trigger: CATAGTCTTAACAGGTGGCCATTGTCGTGAAACGAG...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGCCTAGCCTGCGCCGGTaGGGAGGCAGCGTCGCGCCC +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLPSLRR*GGSVAP
Trigger: GGGCGCGACGCTGCCTCCTCACCGGCGCAGGCTAGG...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423968.7
ENST00000621127.4
CDS-3UTR GCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTCTTTAAGAGCCTCTaGGCTCCAACCTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGLFKSL*APTFKS
Trigger: AGATTTAAAGGTTGGAGCGCAGAGGCTCTTAAAGAG...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR GCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGTGATCTTCCTCAAGTaGATCAAATCGACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAVIFLK*IKSTLL
Trigger: CAACAAGGTCGATTTGATGCACTTGAGGAAGATCAC...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGTGATCTTCCTCAAGTaGATCAAATCGACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQVIFLK*IKSTLL
Trigger: CAACAAGGTCGATTTGATGCACTTGAGGAAGATCAC...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGCACAAGATCACACATTaGAGTTTGTGGGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRHKITH*SLWVPV
Trigger: CACAGGCACCCACAAACTGCAATGTGTGATCTTGTG...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCAAGGAAACTTTGAAGTaGCTCACCTGGAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGKETLK*LTWNVL
Trigger: GAGAACATTCCAGGTGAGGCACTTCAAAGTTTCCTT...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGACTATCAAACTCAGTaGTGTCGAGGAGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRDYQTQ*CRGVAA
Trigger: AGCTGCAACTCCTCGACAGCACTGAGTTTGATAGTC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCCGCCCCCTCCTAGCCTaGGCCGGTGAGGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGRPLLA*AGEEAA
Trigger: CGCTGCCTCCTCACCGGCGCAGGCTAGGAGGGGGCG...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423968.7
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCATCTTCTGGAAAAACTaGATGGTGAGGGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAIFWKN*MVRALL
Trigger: CAAAAGTGCCCTCACCATCCAGTTTTTCCAGAAGAT...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CCA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTATCTTCTGGAAAAACTaGATGGTGAGGGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPIFWKN*MVRALL
Trigger: CAAAAGTGCCCTCACCATCCAGTTTTTCCAGAAGAT...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCACAAAGATCTTCTaGAAAAACTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASGTKIF*KNWMVR
Trigger: CCTCACCATCCAGTTTTTCCAGAAGATCTTTGTGCC...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CCA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTCCAGAACGTCCAAGATaGCCCATTGATTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPPERPR*PIDCQS
Trigger: AGATTGACAATCAATGGGCCATCTTGGACGTTCTGG...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCATCAAATCGACCTTGTTaGCCACGAGGATCATCGGGA +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPSNRPC*PRGSSG
Trigger: TCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGA...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTGTGGGTCCTTGGCACTaGTTTCTATGTACGGAATAT +
Preference number: 4 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPVGPWH*FLCTEY
Trigger: ATATTCCGTACATAGAAACCAGTGCCAAGGACCCAC...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGTGGGTCCTTGGCACTaGTTTCTATGTACGGAATAT +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASVGPWH*FLCTEY
Trigger: ATATTCCGTACATAGAAACCAGTGCCAAGGACCCAC...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAACTCTAACGAGGTCATaGAAGGCTTTGTCGACATTG +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASTLTRS*KALSTL
Trigger: CAATGTCGACAAAGCCTTCCATGACCTCGTTAGAGT...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTAGGGGTCCCGAGGGCTaGCCAGGCCACCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRRGPEG*PGHRHC
Trigger: ACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGAAAAACTCCAGTCTTTaGCTCACACCAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGKNSSL*LTPAAP
Trigger: AGGTGCTGCTGGTGTGAGCCAAAGACTGGAGTTTTT...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCTTGAAGTGCCTCACCTaGAATGTTCTCTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLLKCLT*NVLSYP
Trigger: AGGATAAGAGAGAACATTCCAGGTGAGGCACTTCAA...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGGGGAAGCATAAGGATTaGGAAGAGCTTTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRGKHKD*EELCPF
Trigger: AAAAGGACAAAGCTCTTCCCAATCCTTATGCTTCCC...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGGTCTTCTCACCTTTATaGCCGAGGTCTCTGTTCTAC +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGVFSPL*PRSLFY
Trigger: GTAGAACAGAGACCTCGGCCATAAAGGTGAGAAGAC...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGTCTGTCCCAACTGTGTaGTTGAAATCCCTATGTCTT +
Preference number: 4 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRSVPTV*LKSLCL
Trigger: AAGACATAGGGATTTCAACCACACAGTTGGGACAGA...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGCTCTACACTCTACTCTaGCCTATCTGGAAGCTACCT +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRLYTLL*PIWKLP
Trigger: AGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAG...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTGAGGGTGTCAAACAGTaGAAGAAATCTGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPEGVKQ*KKSEST
Trigger: TGTGCTCTCAGATTTCTTCCACTGTTTGACACCCTC...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGTGGGAGTGGAGAGGATaGCTAGGATTATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRWEWRG*LGLSLE
Trigger: TTCCAGAGATAATCCTAGCCATCCTCTCCACTCCCA...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTCTCGTTTCACGACAATaGCCACCTGTTAAGACTATG +
Preference number: 4 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPLVSRQ*PPVKTM
Trigger: CATAGTCTTAACAGGTGGCCATTGTCGTGAAACGAG...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCACATTAGGTTACTTTaGCGTGTCAGTGTATTCGTA +
Preference number: 4 (lower is better)
Translates to: GGVPRAGQATVTVPRASGHIRLL*RVSVFV
Trigger: TACGAATACACTGACACGTCAAAGTAACCTAATGTG...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCACTGATCTGCTTCCAGTaGGACTATCAAACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPLICFQ*DYQTQC
Trigger: GCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAG...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGCCATTTCTTTTCCTTaGTCCCTGGTGATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPAISFP*SLVIFL
Trigger: GAGGAAGATCACCAGGGAGCAAGGAAAAGAAATGGC...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTTTTCCGGAATCTGTTaGCTAATTACTCTAACGAGG +
Preference number: 4 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAFSGIC*LITLTR
Trigger: CCTCGTTAGAGTAATTAGGCAACAGATTCCGGAAAA...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCTTTTCCGGAATCTGTTaGCTAATTACTCTAACGAGG +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLFSGIC*LITLTR
Trigger: CCTCGTTAGAGTAATTAGGCAACAGATTCCGGAAAA...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTTTTCCGGAATCTGTTaGCTAATTACTCTAACGAGG +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAFSGIC*LITLTR
Trigger: CCTCGTTAGAGTAATTAGGCAACAGATTCCGGAAAA...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAAAGGAAACTTTGAAGTaGCTCACCTGGAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: WGGVPRAGQATVTVPRASKETLK*LTWNVL
Trigger: GAGAACATTCCAGGTGAGGCACTTCAAAGTTTCCTT...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGACTCTAACGAGGTCATaGAAGGCTTTGTCGACATTG +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGTLTRS*KALSTL
Trigger: CAATGTCGACAAAGCCTTCCATGACCTCGTTAGAGT...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGGTCTCCCCGCCATTTaGTTTTCTTCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRGLPAI*FSSSSS
Trigger: AGAAGAAGAAGAAGAAAACCAAATGGCGGGGAGACC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGGGTCTCCCCGCCATTTaGTTTTCTTCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGGLPAI*FSSSSS
Trigger: AGAAGAAGAAGAAGAAAACCAAATGGCGGGGAGACC...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGGTTTGTGGGTGCCTGTaGCCCGGTCTCCCCGCCATT +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVVCGCL*PGLPAI
Trigger: AATGGCGGGGAGACCGGGCCACAGGCACCCACAAAC...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGAGGGTGTCAAACAGTaGAAGAAATCTGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPREGVKQ*KKSEST
Trigger: TGTGCTCTCAGATTTCTTCCACTGTTTGACACCCTC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAATTCCCTTCGAATCCTaGGACGTCTTTCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPIPFES*DVFLPD
Trigger: ATCTGGAAGAAAGACGTCTCAGGATTCGAAGGGAAT...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR TCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGTTGAGTTTTGGCACTaGTGGGAAAACTCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRVEFWH*WENSVK
Trigger: TTTAACCGAGTTTTCCCATCAGTGCCAAAACTCAAC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGAGGTGGGAAAGCCCGTaGCCTCTGGGCAAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVRWESP*PLGKAR
Trigger: TCTGGCTTTGCCCAGAGGGCACGGGCTTTCCCACCT...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGAGGTGGGAAAGCCCGTaGCCTCTGGGCAAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWRWESP*PLGKAR
Trigger: TCTGGCTTTGCCCAGAGGGCACGGGCTTTCCCACCT...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGGCTTCAGGTCTTGGTaGTGTTTTAGTGATAACAGT +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRGFRSW*CFSDNS
Trigger: ACTGTTATCACTAAAACAGCACCAAGACCTGAAGCC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGATACTGGAAGGGGTCTaGTCATTGACTAGGCTTATA +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGILEGV*SLTRLI
Trigger: TATAAGCCTAGTCAATGAGCAGACCCCTTCCAGTAT...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGATACTGGAAGGGGTCTaGTCATTGACTAGGCTTATA +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRILEGV*SLTRLI
Trigger: TATAAGCCTAGTCAATGAGCAGACCCCTTCCAGTAT...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGAAGGAAACTTTGAAGTaGCTCACCTGGAATGTTCTC +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRKETLK*LTWNVL
Trigger: GAGAACATTCCAGGTGAGGCACTTCAAAGTTTCCTT...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGTGCTGTCGAGGAGTTaGAGCTCCACGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSVLSRS*SSTVGM
Trigger: CATGCCCACCGTGGAGCTGCAACTCCTCGACAGCAC...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGGGGCCCAAACTTCGTTaGGATGGATGCGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVGPKLR*DGCDGD
Trigger: GTCCCCGTCGCATCCATCCCAACGAAGTTTGGGCCC...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCTCCCCGCAGGCCTTCTaGGTGCACCGTTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFSPQAF*VHRSRA
Trigger: GGCCCTGGAACGGTGCACCCAGAAGGCCTGCGGGGA...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGCACAAAGATCTTCTaGAAAAACTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPGTKIF*KNWMVR
Trigger: CCTCACCATCCAGTTTTTCCAGAAGATCTTTGTGCC...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCACGGAATATTGTGTTTaGTCGCCATTTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQATEYCV*SPFLFL
Trigger: AAGGAAAAGAAATGGCGACCAAACACAATATTCCGT...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCACGGAATATTGTGTTTaGTCGCCATTTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLTEYCV*SPFLFL
Trigger: AAGGAAAAGAAATGGCGACCAAACACAATATTCCGT...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAAAGGGGTCCCGAGGGCTaGCCAGGCCACCGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDERGPEG*PGHRHC
Trigger: ACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGCCCAGGTTTGACCCATaGCCTGAGGCCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWPRFDP*PEASSY
Trigger: GTAGCTGGAGGCCTCAGGCCATGGGTCAAACCTGGG...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTCCCAGGTTTGACCCATaGCCTGAGGCCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSPRFDP*PEASSY
Trigger: GTAGCTGGAGGCCTCAGGCCATGGGTCAAACCTGGG...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGATGGCTTCAGGTCTTaGTGCTGTTTTAGTGATAAC +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRDGFRS*CCFSDN
Trigger: GTTATCACTAAAACAGCACCAAGACCTGAAGCCATC...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGGATGGCTTCAGGTCTTaGTGCTGTTTTAGTGATAAC +
Preference number: 4 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGDGFRS*CCFSDN
Trigger: GTTATCACTAAAACAGCACCAAGACCTGAAGCCATC...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGAATTTCAAACACAATaGGCTGCCAATGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPEFQTQ*AANGGN
Trigger: GTTCCCTCCATTGGCAGCCCATTGTGTTTGAAATTC...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTTGTCTCCTGGAAAAGTaGGACAGGCCCCACGAGGCC +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRCLLEK*DRPHEA
Trigger: GGCCTCGTGGGGCCTGTCTCACTTTTCCAGGAGACA...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCCGCAGGCCTTCTGGGTaGACCGTTCCAGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATRRPSG*TVPGPK
Trigger: TTTGGGCCCTGGAACGGTGCACCCAGAAGGCCTGCG...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR GCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGGCGCTGAATTCCTCCTaGCCAGCTGTGTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVALNSS*PAVSRT
Trigger: CGTTCTGGACACAGCTGGGCAGGAGGAATTCAGCGC...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000621127.4
CDS-3UTR GCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGTTTTCCGGAATCTGTTaGCTAATTACTCTAACGAGG +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRFSGIC*LITLTR
Trigger: CCTCGTTAGAGTAATTAGGCAACAGATTCCGGAAAA...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCCTGTTTTCTAATATTTaGATCCCCAACCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: EGSRGLARPPSLCPGPQALFSNI*IPNHRK
Trigger: TTTCCTATGGTTGGGGATGCAAATATTAGAAAACAG...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCCTGTTTTCTAATATTTaGATCCCCAACCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLLFSNI*IPNHRK
Trigger: TTTCCTATGGTTGGGGATGCAAATATTAGAAAACAG...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAATACTGGAAGGGGTCTaGTCATTGACTAGGCTTATA +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPILEGV*SLTRLI
Trigger: TATAAGCCTAGTCAATGAGCAGACCCCTTCCAGTAT...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAATGGGGAGGTTGTCACTaGGGACGGCGCTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLEWGGCH*GRRWLP
Trigger: TGGCAACCAGCGCCGTCCCCAGTGACAACCTCCCCA...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCGTTTGTGGGTGCCTGTaGCCCGGTCTCCCCGCCATT +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATVCGCL*PGLPAI
Trigger: AATGGCGGGGAGACCGGGCCACAGGCACCCACAAAC...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTCCCAGGTTTGACCCATaGCCTGAGGCCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRPRFDP*PEASSY
Trigger: GTAGCTGGAGGCCTCAGGCCATGGGTCAAACCTGGG...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCATCTGTCCCAACTGTGTaGTTGAAATCCCTATGTCTT +
Preference number: 4 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPSVPTV*LKSLCL
Trigger: AAGACATAGGGATTTCAACCACACAGTTGGGACAGA...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGCCCCAGCCGTGGGAGTaGAGAGGATGGCTAGGATTA +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVPQPWE*RGWLGL
Trigger: TAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGG...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGCATTGTCCCCAGCCGTaGGAGTGGAGAGGATGGCTA +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVHCPQP*EWRGWL
Trigger: TAGCCATCCTCTCCACTCCCACGGCTGGGGACAATG...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGGCGGCACGTGCCTGTaGTCTCATCTACTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGGGTCL*SHLLGR
Trigger: CCTCCCGAGTAGATGAGATCACAGGCACGTGCCGCC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR TCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGCTTCCTTGTCTCTTTaGGAGGTGGGAAAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSASLSL*EVGKPV
Trigger: CACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGC...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGCGCAGGCCTTCTGGGTaGACCGTTCCAGGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWRRPSG*TVPGPK
Trigger: TTTGGGCCCTGGAACGGTGCACCCAGAAGGCCTGCG...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR GCA 90 bp GCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGGGACGGCGCTGGTTaGCATGTTTCTCGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: AYRWLPCLFERWESPCPLGDGAG*HVSRRS
Trigger: TGACCTACGAGAAACATGGCAACCAGCGCCGTCCCC...CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR GCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCATTGCAGTTTGTGGGTaGCTGTGGCCCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATIAVCG*LWPGLP
Trigger: GGGGAGACCGGGCCACAGGCACCCACAAACTGCAAT...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGGGGGCACTTGGATGCTaGTTCTGCTTACAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWGALGC*FCLQVA
Trigger: AGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCC...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGCCAGGGGCACTTGGATaGTGCTTCTGCTTACAGGTG +
Preference number: 4 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWPGALG*CFCLQV
Trigger: CACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCTGG...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGCTCGTAGTGGTTGGTaGCCAGCAGGAGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSARSGW*PAGVFW
Trigger: CCAGAAAACTCCTGCTGGGCACCAACCACTACGAGC...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTCCACCAGCTTGTATGTaGGGAGGTTGTCACTGGGGA +
Preference number: 4 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSPPACM*GGCHWG
Trigger: TCCCCAGTGACAACCTCCCCACATACAAGCTGGTGG...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGACACATTGCAGTTTGTaGGTGCCTGTGGCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVTHCSL*VPVARS
Trigger: AGACCGGGCCACAGGCACCCACAAACTGCAATGTGT...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAATTCAGTGCAGTTAGGTaGGGAGGGGTCCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLEFSAVR*GGVPRA
Trigger: AGCCCTCGGGACCCCTCCCCACCTAACTGCACTGAA...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAAGGGGCCAGGGGCACTTaGATGCTGCTTCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKGARGT*MLLLLT
Trigger: TGTAAGCAGAAGCAGCATCCAAGTGCCCCTGGCCCC...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAAGCTCCACGGTGGGCATaGGGTATGCTCGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKAPRWA*GMLVVV
Trigger: AACCACTACGAGCATACCCCATGCCCACCGTGGAGC...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGGTGGGTCATGTCTCCTaGAAAAGTGAGACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWVGHVS*KSETGP
Trigger: GGGGCCTGTCTCACTTTTCCAGGAGACATGACCCAC...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGACAATGGGCTGCCAATaGAGGGAACCTGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVTMGCQ*REPVCG
Trigger: GCCACAGACAGGTTCCCTCCATTGGCAGCCCATTGT...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTACCGGGTCAGATCCGTaGTGCCGGGGAGCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGTGSDP*CRGAGF
Trigger: AAAGCCAGCTCCCCGGCACCACGGATCTGACCCGGT...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614350.4
3UTR CAA 72 bp TCTAGGCCATGTGTAGGGTCTCTTTCCCTCCCAGGTTaGACCCATGGCCTGAGGCCTCCAGCTACAGTTCCC +
Preference number: 4 (lower is better)
Translates to: SRPCVGSLSLPG*THGLRPPATVP
Trigger: GGGAACTGTAGCTGGAGGCCTCAGGCCATGGGTCAAACCTGGGAGGGAAAGAGACCCTACACATGGCCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
3UTR CAA 72 bp CGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTaGGGTTTCTTTCTCCAGAGTGGCCAGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: RVSWHPVGCSLS*GFFLQSGQATC
Trigger: GCAGGTGGCCTGGCCACTCTGGAGAAAGAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGAGGATCATCGGGAATaGCTCCCTGTCTTTGACGCG +
Preference number: 4 (lower is better)
Translates to: AYRWLPCLFERWESPCPLEDHRE*LPVFDA
Trigger: CGCGTCAAAGACAGGGAGTCATTCCCGATGATCCTC...CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAAGAGGATCATCGGGAATaGCTCCCTGTCTTTGACGCG +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKEDHRE*LPVFDA
Trigger: CGCGTCAAAGACAGGGAGTCATTCCCGATGATCCTC...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTAGGCTTTGTCGACATTaGGAGGTGGGTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRRLCRH*EVGPWH
Trigger: GTGCCAAGGACCCACCTCTCAATGTCGACAAAGCCT...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGGAGGTGGTAGTCAGTTaGCTCCAAGGGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVEVVVS*LQGKMA
Trigger: AGCCATCTTCCCTTGGAGTCAACTGACTACCACCTC...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCGCCCCTCAGTGCTGGTaGTCTTGCCGAGGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFAPQCW*SCRGRN
Trigger: GTTCCTACCTCGGCAAGATCACCAGCACTGAGGGGC...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCTGTCTCCTGGAAAAGTaGGACAGGCCCCACGAGGCC +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGCLLEK*DRPHEA
Trigger: GGCCTCGTGGGGCCTGTCTCACTTTTCCAGGAGACA...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCCTTTCTTCCAGATCATaGCCCAGCGTCTCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATLSSRS*PSVSPR
Trigger: GCGGGGAGAGACGCTGGGGCATGATCTGGAAGAAAG...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR GCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCAGGTGGGAAAGCCCGTaGCCTCTGGGCAAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFRWESP*PLGKAR
Trigger: TCTGGCTTTGCCCAGAGGGCACGGGCTTTCCCACCT...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAACCAGGGGCACTTGGATaGTGCTTCTGCTTACAGGTG +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKPGALG*CFCLQV
Trigger: CACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCTGG...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTCCAGGGGCACTTGGATaGTGCTTCTGCTTACAGGTG +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRPGALG*CFCLQV
Trigger: CACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCTGG...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGCTGTTTTCTAATATTTaGATCCCCAACCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRLFSNI*IPNHRK
Trigger: TTTCCTATGGTTGGGGATGCAAATATTAGAAAACAG...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCGTGCTGTCGAGGAGTTaGAGCTCCACGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGVLSRS*SSTVGM
Trigger: CATGCCCACCGTGGAGCTGCAACTCCTCGACAGCAC...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGACGCGCAGGATAAGCTaGTGGAAGCGGTCCACGTGC +
Preference number: 4 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWTRRIS*WKRSTC
Trigger: GCACGTGGACCGCTTCCACCAGCTTATCCTGCGCGT...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTTTCAGTGCAGTTAGGTaGGGAGGGGTCCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGFSAVR*GGVPRA
Trigger: AGCCCTCGGGACCCCTCCCCACCTAACTGCACTGAA...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAATGTCTCTTTGAGAGGTaGGAAAGCCCGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKCLFER*ESPCPL
Trigger: CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACA...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCGTTGCAGCTCCACGGTaGGCATGGGGTATGCTCGTA +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATVAAPR*AWGMLV
Trigger: TACGAGCATACCCCATGCCCACCGTGGAGCTGCAAC...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTGTTGCAGCTCCACGGTaGGCATGGGGTATGCTCGTA +
Preference number: 4 (lower is better)
Translates to: KWPLSPAVGVERMARIISVAAPR*AWGMLV
Trigger: TACGAGCATACCCCATGCCCACCGTGGAGCTGCAAC...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAATTGGCTCCTCGGTCATaGTGTGGCGTGGCCAACCAG +
Preference number: 4 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDELAPRS*CGVANQ
Trigger: CTGGTTGGCCACGCCACACCATGACCGAGGAGCCAA...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTTGCACAGGTAGTAAGTaGCCATTGTCCCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRCTGSK*PLSPAV
Trigger: CACGGCTGGGGACAATGGCCACTTACTACCTGTGCA...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGGCGGCACGTGCCTGTaGTCTCATCTACTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSGGTCL*SHLLGR
Trigger: CCTCCCGAGTAGATGAGATCACAGGCACGTGCCGCC...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR TCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAAGCTTCCTTGTCTCTTTaGGAGGTGGGAAAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLEASLSL*EVGKPV
Trigger: CACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGC...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGCTTGCAGAAGGTATATaGGAGCCACACATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVLAEGI*EPHISP
Trigger: TGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAG...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGAAGCCATCCCCCGTaGGCATGTATTGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRGSHPP*ACIAPA
Trigger: TGCGGGAGCAATACATGCGCACGGGGGATGGCTTCC...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAAGGACACTGCCCTGTGTaGAGGGCTTCTTCTCCTACT +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLEGHCPV*RASSPT
Trigger: AGTAGGAGAAGAAGCCCTGCACACAGGGCAGTGTCC...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAATCCCGAGTGGCAAAGTaGACAGGTAGTAAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKSRVAK*TGSKWP
Trigger: TGGCCACTTACTACCTGTGCACTTTGCCACTCGGGA...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCGCGCTGAATTCCTCCTaGCCAGCTGTGTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGALNSS*PAVSRT
Trigger: GGTTCTGGACACAGCTGGGCAGGAGGAATTCAGCGC...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614350.4
CDS-3UTR CCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGAAGGTGGACGCCGAGTaGGAATTCGACTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWKVDAE*EFDSAS
Trigger: AGAGGCCGAGTCGAATTCCCACTCGGCGTCCACCTT...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAACGCGCAGGATAAGCTaGTGGAAGCGGTCCACGTGC +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRTRRIS*WKRSTC
Trigger: GCACGTGGACCGCTTCCACCAGCTTATCCTGCGCGT...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGTCAAATCGACCTTGTTaGCCACGAGGATCATCGGGA +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVSNRPC*PRGSSG
Trigger: TCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGA...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAGTTTGTGGGTGCCTGTaGCCCGGTCTCCCCGCCATT +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPVCGCL*PGLPAI
Trigger: AATGGCGGGGAGACCGGGCCACAGGCACCCACAAAC...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAAACACATTGCAGTTTGTaGGTGCCTGTGGCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLETHCSL*VPVARS
Trigger: AGACCGGGCCACAGGCACCCACAAACTGCAATGTGT...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGATTCAGTGCAGTTAGGTaGGGAGGGGTCCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRFSAVR*GGVPRA
Trigger: AGCCCTCGGGACCCCTCCCCACCTAACTGCACTGAA...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCGGGGCCAGGGGCACTTaGATGCTGCTTCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGGARGT*MLLLLT
Trigger: TGTAAGCAGAAGCAGCATCCAAGTGCCCCTGGCCCC...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGACTCCAAGGGAAGATaGCTTCAGGTCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRDSKGR*LQVLVL
Trigger: CAGCACCAAGACCTGAAGCCATCTTCCCTTGGAGTC...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGCATCATCAGGGAGCTaGGGAGACTGCCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLASSGS*GDCPLA
Trigger: TGCAAGGGGGCAGTCTCCCCAGCTCCCTGATGATGC...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTTTCTTTCTCCAGAGTaGCCAGGCCACCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATFLSPE*PGHLLR
Trigger: CCTCAGCAGGTGGCCTGGCCACTCTGGAGAAAGAAA...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGTATGCTCGTAGTGGTTaGTGCCCAGCAGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWYARSG*CPAGVF
Trigger: GAAAACTCCTGCTGGGCACCAACCACTACGAGCATA...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGGCTCCACGGTGGGCATaGGGTATGCTCGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWAPRWA*GMLVVV
Trigger: AACCACTACGAGCATACCCCATGCCCACCGTGGAGC...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGGCCAAGTGCAGGATaGATGAACAGATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRGPSAG*MNRCTV
Trigger: GACAGTGCATCTGTTCATCCATCCTGCACTTGGCCC...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCTCCTCGGTCATGGTGTaGCGTGGCCAACCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFSSVMV*RGQPGF
Trigger: GAAACCTGGTTGGCCACGCCACACCATGACCGAGGA...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTTCTGAGAGCACACAATaGCAAAGGCATGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRSESTQ*QRHGVR
Trigger: CCTCACCCCATGCCTTTGCCATTGTGTGCTCTCAGA...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTCCCCAGCCGTGGGAGTaGAGAGGATGGCTAGGATTA +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGPQPWE*RGWLGL
Trigger: TAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGG...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTGCACAGGTAGTAAGTaGCCATTGTCCCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATCTGSK*PLSPAV
Trigger: CACGGCTGGGGACAATGGCCACTTACTACCTGTGCA...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTACAATGGGCTGCCAATaGAGGGAACCTGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KWPLSPAVGVERMARIISTMGCQ*REPVCG
Trigger: GCCACAGACAGGTTCCCTCCATTGGCAGCCCATTGT...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CAA 72 bp ATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTaGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: MLLLLTGGFLVS*RGGKARALWAK
Trigger: CTTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAGCCCCTCAGTGCTGGTaGTCTTGCCGAGGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPAPQCW*SCRGRN
Trigger: GTTCCTACCTCGGCAAGATCACCAGCACTGAGGGGC...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGCGCTGAATTCCTCCTaGCCAGCTGTGTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLALNSS*PAVSRT
Trigger: CGTTCTGGACACAGCTGGGCAGGAGGAATTCAGCGC...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAACTTGGATGCTGCTTCTaGTTACAGGTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKLGCCF*LQVASL
Trigger: CAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAG...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAAGGGGCACTTGGATGCTaGTTCTGCTTACAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDEGALGC*FCLQVA
Trigger: AGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCC...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAATGGCATCCAGTTGGGTaGTCACTTTCCTTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKWHPVG*SLSLGF
Trigger: GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCA...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTGCCTCACCTCCAGTTTaGAGCTGCCATCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: KWPLSPAVGVERMARIISASPPV*SCHQTA
Trigger: TGCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGC...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAAATTTCAGGAAGGCTGTaGTCCAGGGGATGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLEISGRL*SRGCEG
Trigger: ACCCTCACATCCCCTGGAGCACAGCCTTCCTGAAAT...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTATTTCAGGAAGGCTGTaGTCCAGGGGATGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KWPLSPAVGVERMARIISISGRL*SRGCEG
Trigger: ACCCTCACATCCCCTGGAGCACAGCCTTCCTGAAAT...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAATCCCGAGTGGCAAAGTaGACAGGTAGTAAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLESRVAK*TGSKWP
Trigger: TGGCCACTTACTACCTGTGCACTTTGCCACTCGGGA...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTCTGTGGCTCCAGATTTaGTGTAACATGTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRLWLQI*CNMSEG
Trigger: CCCCTCAGACATGTTACAGCAAATCTGGAGCCACAG...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGGGCCCAAACTTCGTTaGGATGGATGCGACGGGGAC +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSGPKLR*DGCDGD
Trigger: GTCCCCGTCGCATCCATCCCAACGAAGTTTGGGCCC...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGAAGGTGGACGCCGAGTaGGAATTCGACTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLKVDAE*EFDSAS
Trigger: AGAGGCCGAGTCGAATTCCCACTCGGCGTCCACCTT...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAATCAAATCGACCTTGTTaGCCACGAGGATCATCGGGA +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKSNRPC*PRGSSG
Trigger: TCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGA...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGAGAACCCGGGTGTCTTaGCATCCAGTTGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWRTRVS*HPVGCS
Trigger: TGAGCACCCAACTGGATGCCAAGACACCCGGGTTCT...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCAGAACCCGGGTGTCTTaGCATCCAGTTGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFRTRVS*HPVGCS
Trigger: TGAGCACCCAACTGGATGCCAAGACACCCGGGTTCT...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGTTGCAGCTCCACGGTaGGCATGGGGTATGCTCGTA +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRVAAPR*AWGMLV
Trigger: TACGAGCATACCCCATGCCCACCGTGGAGCTGCAAC...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCCCATGGAGTTCAACGTaGGCCAAGTGCAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATPWSST*AKCRMD
Trigger: ATCCATCCTGCACTTGGCCCACGTTGAACTCCATGG...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGCTCTACACTCTACTCTaGCCTATCTGGAAGCTACCT +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVLYTLL*PIWKLP
Trigger: AGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAG...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGACATTGTCCCCAGCCGTaGGAGTGGAGAGGATGGCTA +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRHCPQP*EWRGWL
Trigger: TAGCCATCCTCTCCACTCCCACGGCTGGGGACAATG...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAAGTGGGTCATGTCTCCTaGAAAAGTGAGACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDEVGHVS*KSETGP
Trigger: GGGGCCTGTCTCACTTTTCCAGGAGACATGACCCAC...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTACAATGGGCTGCCAATaGAGGGAACCTGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGTMGCQ*REPVCG
Trigger: GCCACAGACAGGTTCCCTCCATTGGCAGCCCATTGT...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGCAGCACAGCTGATGTaGAAACGCAGCAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGAAQLM*KRSKRQ
Trigger: CTGTCTCTTGCTGCGTTTTCACATCAGCTGTGCTGC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCGGCCAGGCCACCTGCTaGGGATATTCTAGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGGQATC*GYSSLH
Trigger: ATGCAAACTAGAATATCCTCAGCAGGTGGCCTGGCC...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGTCTAAGGAAACTTTaGAGTGCCTCACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRGLRKL*SASPGM
Trigger: CATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACC...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAACTGTTCTACATCAGCTaGTCTGCTTCCAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKLFYIS*SASSET
Trigger: AGTCTCACTGGAAGCAGATCAGCTGATGTAGAACAG...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCCAAGTGCAGGATGGATaGACAGATGCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATQVQDG*TDALSL
Trigger: AAGGGACAGTGCATCTGTTCATCCATCCTGCACTTG...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGAGGTTCAAACATCACTaGGATCTTCAGGCATCACTC +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVRFKHH*DLQASL
Trigger: GAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCT...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTAGGTTCAAACATCACTaGGATCTTCAGGCATCACTC +
Preference number: 4 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSRFKHH*DLQASL
Trigger: GAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCT...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGCACAAGATCACACATTaGAGTTTGTGGGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AYRWLPCLFERWESPCPLHKITH*SLWVPV
Trigger: CACAGGCACCCACAAACTGCAATGTGTGATCTTGTG...CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTCTTGGATGCTGCTTCTaGTTACAGGTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KWPLSPAVGVERMARIISLGCCF*LQVASL
Trigger: CAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAG...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGGAGACTGCCCCCTTaGAGAAGGTATATGAGAGCC +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRGRLPP*RRYMRA
Trigger: GGCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCC...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTCACACAACAAACTGCTaGAGATACCACTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSHTTNC*RYHLGK
Trigger: CTTCCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTG...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTCTGCACACAACAAACTaGTGCAGATACCACTTAGGG +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRLHTTN*CRYHLG
Trigger: CCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTGCAG...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCATTTCAGGAAGGCTGTaGTCCAGGGGATGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFISGRL*SRGCEG
Trigger: ACCCTCACATCCCCTGGAGCACAGCCTTCCTGAAAT...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCACAAAGATCTTCTaGAAAAACTGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSGTKIF*KNWMVR
Trigger: CCTCACCATCCAGTTTTTCCAGAAGATCTTTGTGCC...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CCA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGGTGGGTCCTTGGCACTaGTTTCTATGTACGGAATAT +
Preference number: 4 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWVGPWH*FLCTEY
Trigger: ATATTCCGTACATAGAAACCAGTGCCAAGGACCCAC...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGACTCTAACGAGGTCATaGAAGGCTTTGTCGACATTG +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVTLTRS*KALSTL
Trigger: CAATGTCGACAAAGCCTTCCATGACCTCGTTAGAGT...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGTTGGGCCAAGGGTTGTaGTTAGAAATGGTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVLGQGL*LEMVSV
Trigger: CACTGAAACCATTTCTAACCACAACCCTTGGCCCAA...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGTGTCTCTTTGAGAGGTaGGAAAGCCCGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLCLFER*ESPCPL
Trigger: CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACA...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGAGAACCCGGGTGTCTTaGCATCCAGTTGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLRTRVS*HPVGCS
Trigger: TGAGCACCCAACTGGATGCCAAGACACCCGGGTTCT...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCACATTGTCCCCAGCCGTaGGAGTGGAGAGGATGGCTA +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSHCPQP*EWRGWL
Trigger: TAGCCATCCTCTCCACTCCCACGGCTGGGGACAATG...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCTCCAGGTGTCCCGAGTaGCAAAGTGCACAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFSRCPE*QSAQVV
Trigger: TACTACCTGTGCACTTTGCCACTCGGGACACCTGGA...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAATGTCTGAGGGGCCTTTaGGTTAAAGTTGCCACGTTA +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKCLRGL*VKVATL
Trigger: TAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTATTCCCTTCGAATCCTaGGACGTCTTTCTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRIPFES*DVFLPD
Trigger: ATCTGGAAGAAAGACGTCTCAGGATTCGAAGGGAAT...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR TCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAGAGGATCATCGGGAATaGCTCCCTGTCTTTGACGCG +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPEDHRE*LPVFDA
Trigger: CGCGTCAAAGACAGGGAGTCATTCCCGATGATCCTC...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTTTCCTTGCTCCCTGGTaGTCTTCCTCAAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGFLAPW*SSSSAS
Trigger: TGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAA...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAAGGCTTTGTCGACATTaGGAGGTGGGTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPRLCRH*EVGPWH
Trigger: GTGCCAAGGACCCACCTCTCAATGTCGACAAAGCCT...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCAACTTCACCAGGCAGTaGGCCCAGACCCCTTTAATA +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGNFTRQ*AQTPLI
Trigger: TATTAAAGGGGTCTGGGCTCACTGCCTGGTGAAGTT...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTACCAGAGAGGTCTGCTaGACACTTGAAACTTCACCA +
Preference number: 4 (lower is better)
Translates to: KWPLSPAVGVERMARIISTREVC*TLETSP
Trigger: TGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGT...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGCAGCACAGCTGATGTaGAAACGCAGCAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLAAQLM*KRSKRQ
Trigger: CTGTCTCTTGCTGCGTTTTCACATCAGCTGTGCTGC...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTACCAAGCAGCACAGCTaGTGTGAAAACGCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGTKQHS*CENAAR
Trigger: TCTTGCTGCGTTTTCACATCAGCTGTGCTGCTTGGT...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTCTGATCTGCTTCCAGTaGGACTATCAAACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: KWPLSPAVGVERMARIISLICFQ*DYQTQC
Trigger: GCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAG...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAACTGTTCTACATCAGCTaGTCTGCTTCCAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLELFYIS*SASSET
Trigger: AGTCTCACTGGAAGCAGATCAGCTGATGTAGAACAG...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCCACCTGTTAAGACTATaGAACAGAAGCTGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFHLLRL*NRSWAL
Trigger: GAGCGCCCAGCTTCTGTTTCATAGTCTTAACAGGTG...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGCTCTTTAAGAGCCTCTaGGCTCCAACCTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVLFKSL*APTFKS
Trigger: AGATTTAAAGGTTGGAGCGCAGAGGCTCTTAAAGAG...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR GCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCAGCGCTGAATTCCTCCTaGCCAGCTGTGTCCAGAACG +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPALNSS*PAVSRT
Trigger: CGTTCTGGACACAGCTGGGCAGGAGGAATTCAGCGC...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000621127.4
CDS-3UTR GCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCACCAGGGGCACTTGGATaGTGCTTCTGCTTACAGGTG +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSPGALG*CFCLQV
Trigger: CACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCTGG...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCAGGGAGCTGGGGAGACTaGCCCCTTGCAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPGSWGD*PLAEGI
Trigger: TATACCTTCTGCAAGGGGGCAGTCTCCCCAGCTCCC...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAGCTCGTAGTGGTTGGTaGCCAGCAGGAGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPARSGW*PAGVFW
Trigger: CCAGAAAACTCCTGCTGGGCACCAACCACTACGAGC...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTTCAAACACAATGGGCTaGCAATGGAGGGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGSNTMG*QWREPV
Trigger: GACAGGTTCCCTCCATTGGCAGCCCATTGTGTTTGA...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGAGCTGGCTTTAAGGTaGACGCCGAGTGGGAATTCG +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSELALR*TPSGNS
Trigger: CGAATTCCCACTCGGCGTCCACCTTAAAGCCAGCTC...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAACACATTGCAGTTTGTaGGTGCCTGTGGCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSTHCSL*VPVARS
Trigger: AGACCGGGCCACAGGCACCCACAAACTGCAATGTGT...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCCCCAGGTTTGACCCATaGCCTGAGGCCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTPRFDP*PEASSY
Trigger: GTAGCTGGAGGCCTCAGGCCATGGGTCAAACCTGGG...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGACTCCAAGGGAAGATaGCTTCAGGTCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRDSKGR*LQVLVL
Trigger: CAGCACCAAGACCTGAAGCCATCTTCCCTTGGAGTC...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGGCATCATCAGGGAGCTaGGGAGACTGCCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSASSGS*GDCPLA
Trigger: TGCAAGGGGGCAGTCTCCCCAGCTCCCTGATGATGC...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCACCAGCAGGAGTTTTCTaGCTGTGGACACTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSPAGVF*LWTLPC
Trigger: ACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGG...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCACCAGCAGGAGTTTTCTaGCTGTGGACACTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPPAGVF*LWTLPC
Trigger: ACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGG...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGGCCAAGTGCAGGATaGATGAACAGATGCACTGTC +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRGPSAG*MNRCTV
Trigger: GACAGTGCATCTGTTCATCCATCCTGCACTTGGCCC...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAAGGGGAAATGAGTTCATaGGAGATGAAAGCTTACCAG +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKGEMSS*EMKAYQ
Trigger: CTGGTAAGCTTTCATCTCCCATGAACTCATTTCCCC...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTTGGCTCCTCGGTCATaGTGTGGCGTGGCCAACCAG +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSLAPRS*CGVANQ
Trigger: CTGGTTGGCCACGCCACACCATGACCGAGGAGCCAA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGAGGGTGTCAAACAGTaGAAGAAATCTGAGAGCACA +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWREGVKQ*KKSEST
Trigger: TGTGCTCTCAGATTTCTTCCACTGTTTGACACCCTC...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTTGGGAGTGGAGAGGATaGCTAGGATTATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KWPLSPAVGVERMARIISWEWRG*LGLSLE
Trigger: TTCCAGAGATAATCCTAGCCATCCTCTCCACTCCCA...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCATGCACAGGTAGTAAGTaGCCATTGTCCCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPCTGSK*PLSPAV
Trigger: CACGGCTGGGGACAATGGCCACTTACTACCTGTGCA...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCATGCACAGGTAGTAAGTaGCCATTGTCCCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSCTGSK*PLSPAV
Trigger: CACGGCTGGGGACAATGGCCACTTACTACCTGTGCA...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGACCAGAGAGGTCTGCTaGACACTTGAAACTTCACCA +
Preference number: 4 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWTREVC*TLETSP
Trigger: TGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGT...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGGCCCCTCAGTGCTGGTaGTCTTGCCGAGGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMAPQCW*SCRGRN
Trigger: GTTCCTACCTCGGCAAGATCACCAGCACTGAGGGGC...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGGCCCCTCAGTGCTGGTaGTCTTGCCGAGGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLAPQCW*SCRGRN
Trigger: GTTCCTACCTCGGCAAGATCACCAGCACTGAGGGGC...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCCTGATCTGCTTCCAGTaGGACTATCAAACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFLICFQ*DYQTQC
Trigger: GCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAG...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTTCCCAACTGTGTGGTTaGAATCCCTATGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KWPLSPAVGVERMARIISSQLCG*NPYVFS
Trigger: TGAGAAGACATAGGGATTTCAACCACACAGTTGGGA...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCGGGGACGGCGCTGGTTaGCATGTTTCTCGTAGGTCA +
Preference number: 4 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTGDGAG*HVSRRS
Trigger: TGACCTACGAGAAACATGGCAACCAGCGCCGTCCCC...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR GCA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTGGAAGCCATCCCCCGTaGGCATGTATTGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFGSHPP*ACIAPA
Trigger: TGCGGGAGCAATACATGCGCACGGGGGATGGCTTCC...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGTGATCTTCCTCAAGTaGATCAAATCGACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: AYRWLPCLFERWESPCPLVIFLK*IKSTLL
Trigger: CAACAAGGTCGATTTGATGCACTTGAGGAAGATCAC...CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGATTGCAGTTTGTGGGTaGCTGTGGCCCGGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMIAVCG*LWPGLP
Trigger: GGGGAGACCGGGCCACAGGCACCCACAAACTGCAAT...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGATGGCATCCAGTTGGGTaGTCACTTTCCTTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRWHPVG*SLSLGF
Trigger: GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCA...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAACTGCACACAACAAACTaGTGCAGATACCACTTAGGG +
Preference number: 4 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDELHTTN*CRYHLG
Trigger: CCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTGCAG...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAACAGCTGCCATCAAACTaGACACAACAAACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDEQLPSN*TQQTAA
Trigger: TGCAGCAGTTTGTTGTGTGCAGTTTGATGGCAGCTG...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGCAGCTGCCATCAAACTaGACACAACAAACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWQLPSN*TQQTAA
Trigger: TGCAGCAGTTTGTTGTGTGCAGTTTGATGGCAGCTG...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGACCTCCAGTTTGCAGCTaGCATCAAACTGCACACAAC +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRPPVCS*HQTAHN
Trigger: GTTGTGTGCAGTTTGATGGCAGCTGCAAACTGGAGG...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCGACTATCAAACTCAGTaGTGTCGAGGAGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGDYQTQ*CRGVAA
Trigger: AGCTGCAACTCCTCGACAGCACTGAGTTTGATAGTC...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGCTGTGGCTCCAGATTTaGTGTAACATGTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLLWLQI*CNMSEG
Trigger: CCCCTCAGACATGTTACAGCAAATCTGGAGCCACAG...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCCCAGAACGTCCAAGATaGCCCATTGATTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATPERPR*PIDCQS
Trigger: AGATTGACAATCAATGGGCCATCTTGGACGTTCTGG...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGACGCGCAGGATAAGCTaGTGGAAGCGGTCCACGTGC +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMTRRIS*WKRSTC
Trigger: GCACGTGGACCGCTTCCACCAGCTTATCCTGCGCGT...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTGGTCTCCCCGCCATTTaGTTTTCTTCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KWPLSPAVGVERMARIISGLPAI*FSSSSS
Trigger: AGAAGAAGAAGAAGAAAACCAAATGGCGGGGAGACC...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAAGATGGCTTCAGGTCTTaGTGCTGTTTTAGTGATAAC +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKDGFRS*CCFSDN
Trigger: GTTATCACTAAAACAGCACCAAGACCTGAAGCCATC...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATTTCTTTCTCCAGAGTaGCCAGGCCACCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPFLSPE*PGHLLR
Trigger: CCTCAGCAGGTGGCCTGGCCACTCTGGAGAAAGAAA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAAGGGAAGCATAAGGATTaGGAAGAGCTTTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKGKHKD*EELCPF
Trigger: AAAAGGACAAAGCTCTTCCCAATCCTTATGCTTCCC...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGGCTCCACGGTGGGCATaGGGTATGCTCGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSAPRWA*GMLVVV
Trigger: AACCACTACGAGCATACCCCATGCCCACCGTGGAGC...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCGTCTTCTCACCTTTATaGCCGAGGTCTCTGTTCTAC +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGVFSPL*PRSLFY
Trigger: GTAGAACAGAGACCTCGGCCATAAAGGTGAGAAGAC...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCCTCTACACTCTACTCTaGCCTATCTGGAAGCTACCT +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGLYTLL*PIWKLP
Trigger: AGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAG...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGGGTCATGGTGTGGCGTaGCCAACCAGGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSGHGVA*PTRFPS
Trigger: ACTGGGAAACCTGGTTGGCCACGCCACACCATGACC...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCGCCAGAAGTCCCAGTTaGCTCCTCGGTCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTARSPS*LLGHGV
Trigger: CACACCATGACCGAGGAGCCAACTGGGACTTCTGGC...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCATCCAGGTGTCCCGAGTaGCAAAGTGCACAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPSRCPE*QSAQVV
Trigger: TACTACCTGTGCACTTTGCCACTCGGGACACCTGGA...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
3UTR CAA 72 bp TGTGTGCAGGGCTTCTTCTCCTACTCCGCCATGCTCTaGATTCTGAGCATCTCCATCCTTACTCCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: CVQGFFSYSAML*ILSISILTPSY
Trigger: GTAGGAAGGAGTAAGGATGGAGATGCTCAGAATCAAGAGCATGGCGGAGTAGGAGAAGAAGCCCTGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCATTCCTTGCTCCCTGGTaGTCTTCCTCAAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSFLAPW*SSSSAS
Trigger: TGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAA...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAACCAGAGAGGTCTGCTaGACACTTGAAACTTCACCA +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRTREVC*TLETSP
Trigger: TGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGT...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAAGTTGAGTTTTGGCACTaGTGGGAAAACTCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLEVEFWH*WENSVK
Trigger: TTTAACCGAGTTTTCCCATCAGTGCCAAAACTCAAC...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTCACATTAGGTTACTTTaGCGTGTCAGTGTATTCGTA +
Preference number: 4 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRHIRLL*RVSVFV
Trigger: TACGAATACACTGACACGTCAAAGTAACCTAATGTG...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTCTAAGGAAACTTTaGAGTGCCTCACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLGLRKL*SASPGM
Trigger: CATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACC...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGCTGATCTGCTTCCAGTaGGACTATCAAACTCAGTGC +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLLICFQ*DYQTQC
Trigger: GCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAG...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGCTGTTCTACATCAGCTaGTCTGCTTCCAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLLFYIS*SASSET
Trigger: AGTCTCACTGGAAGCAGATCAGCTGATGTAGAACAG...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGACTGTTCTACATCAGCTaGTCTGCTTCCAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRLFYIS*SASSET
Trigger: AGTCTCACTGGAAGCAGATCAGCTGATGTAGAACAG...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAATCCCAACTGTGTGGTTaGAATCCCTATGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDESQLCG*NPYVFS
Trigger: TGAGAAGACATAGGGATTTCAACCACACAGTTGGGA...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCACAAGTGCAGGATGGATaGACAGATGCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSQVQDG*TDALSL
Trigger: AAGGGACAGTGCATCTGTTCATCCATCCTGCACTTG...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGCCATTTCTTTTCCTTaGTCCCTGGTGATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLAISFP*SLVIFL
Trigger: GAGGAAGATCACCAGGGAGCAAGGAAAAGAAATGGC...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAATTTTCCGGAATCTGTTaGCTAATTACTCTAACGAGG +
Preference number: 4 (lower is better)
Translates to: RWLPCLFERWESPCPLGKFSGIC*LITLTR
Trigger: CCTCGTTAGAGTAATTAGGCAACAGATTCCGGAAAA...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAAGGCTTCAGGTCTTGGTaGTGTTTTAGTGATAACAGT +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLEGFRSW*CFSDNS
Trigger: ACTGTTATCACTAAAACAGCACCAAGACCTGAAGCC...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCATACTGGAAGGGGTCTaGTCATTGACTAGGCTTATA +
Preference number: 4 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATILEGV*SLTRLI
Trigger: TATAAGCCTAGTCAATGAGCAGACCCCTTCCAGTAT...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAACACACAACAAACTGCTaGAGATACCACTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDEHTTNC*RYHLGK
Trigger: CTTCCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTG...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCACCTCCAGTTTGCAGCTaGCATCAAACTGCACACAAC +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPPPVCS*HQTAHN
Trigger: GTTGTGTGCAGTTTGATGGCAGCTGCAAACTGGAGG...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATTACTCCTTCCTACCTaGCTTTCCTCCGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPLLLPT*LSSASP
Trigger: AGGTGAGGCGGAGGAAAGGCAGGTAGGAAGGAGTAA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGGCTCGTAGTGGTTGGTaGCCAGCAGGAGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSARSGW*PAGVFW
Trigger: CCAGAAAACTCCTGCTGGGCACCAACCACTACGAGC...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATCCCGAGTGGCAAAGTaGACAGGTAGTAAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPSRVAK*TGSKWP
Trigger: TGGCCACTTACTACCTGTGCACTTTGCCACTCGGGA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCACTGTGGCTCCAGATTTaGTGTAACATGTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSLWLQI*CNMSEG
Trigger: CCCCTCAGACATGTTACAGCAAATCTGGAGCCACAG...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCATCAAACACAATGGGCTaGCAATGGAGGGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPSNTMG*QWREPV
Trigger: GACAGGTTCCCTCCATTGGCAGCCCATTGTGTTTGA...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGCAAACTTCGTTGGGATaGATGCGACGGGGACAGGCG +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLQTSLG*MRRGQA
Trigger: CGCCTGTCCCCGTCGCATCCATCCCAACGAAGTTTG...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGAGGAGTCTTCAATGGTaGGGTCATAGTCAGGCACAA +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLRSLQW*GHSQAQ
Trigger: TTGTGCCTGACTATGACCCCACCATTGAAGACTCCT...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CCA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCACTCTAACGAGGTCATaGAAGGCTTTGTCGACATTG +
Preference number: 4 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGTLTRS*KALSTL
Trigger: CAATGTCGACAAAGCCTTCCATGACCTCGTTAGAGT...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTTTCAGTGCAGTTAGGTaGGGAGGGGTCCCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVFSAVR*GGVPRA
Trigger: AGCCCTCGGGACCCCTCCCCACCTAACTGCACTGAA...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGTTGGGCCAAGGGTTGTaGTTAGAAATGGTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWLGQGL*LEMVSV
Trigger: CACTGAAACCATTTCTAACCACAACCCTTGGCCCAA...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTGTCTCTTTGAGAGGTaGGAAAGCCCGTGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSCLFER*ESPCPL
Trigger: CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCACTCAGACATTGTGGATaGGGGGTAAGGGAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPLRHCG*GVRERS
Trigger: GCTTCTTTCCCTTACCCCCCATCCACAATGTCTGAG...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCACTCAGACATTGTGGATaGGGGGTAAGGGAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSLRHCG*GVRERS
Trigger: GCTTCTTTCCCTTACCCCCCATCCACAATGTCTGAG...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGAGATCCAGCATGAACTaGAGTTTTCTGGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWRSSMN*SFLDGV
Trigger: GACACCATCCAGAAAACTCCAGTTCATGCTGGATCT...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAAGATGGCTTCAGGTCTTaGTGCTGTTTTAGTGATAAC +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLEDGFRS*CCFSDN
Trigger: GTTATCACTAAAACAGCACCAAGACCTGAAGCCATC...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAAAAAACTCCAGTCTTTaGCTCACACCAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRKNSSL*LTPAAP
Trigger: AGGTGCTGCTGGTGTGAGCCAAAGACTGGAGTTTTT...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCATATGCTCGTAGTGGTTaGTGCCCAGCAGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSYARSG*CPAGVF
Trigger: GAAAACTCCTGCTGGGCACCAACCACTACGAGCATA...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAATCTGTCCCAACTGTGTaGTTGAAATCCCTATGTCTT +
Preference number: 4 (lower is better)
Translates to: PALLPSCTKSLGQGLWLESVPTV*LKSLCL
Trigger: AAGACATAGGGATTTCAACCACACAGTTGGGACAGA...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCACCATGGAGTTCAACGTaGGCCAAGTGCAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPPWSST*AKCRMD
Trigger: ATCCATCCTGCACTTGGCCCACGTTGAACTCCATGG...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGGGGGAAATGAGTTCATaGGAGATGAAAGCTTACCAG +
Preference number: 4 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWGEMSS*EMKAYQ
Trigger: CTGGTAAGCTTTCATCTCCCATGAACTCATTTCCCC...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGGCCAGAAGTCCCAGTTaGCTCCTCGGTCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLARSPS*LLGHGV
Trigger: CACACCATGACCGAGGAGCCAACTGGGACTTCTGGC...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATCTGAGAGCACACAATaGCAAAGGCATGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPSESTQ*QRHGVR
Trigger: CCTCACCCCATGCCTTTGCCATTGTGTGCTCTCAGA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATCCAGGTGTCCCGAGTaGCAAAGTGCACAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPSRCPE*QSAQVV
Trigger: TACTACCTGTGCACTTTGCCACTCGGGACACCTGGA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCACAATGGGCTGCCAATaGAGGGAACCTGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTTMGCQ*REPVCG
Trigger: GCCACAGACAGGTTCCCTCCATTGGCAGCCCATTGT...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAACTCGTTTCACGACAATaGCCACCTGTTAAGACTATG +
Preference number: 4 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDELVSRQ*PPVKTM
Trigger: CATAGTCTTAACAGGTGGCCATTGTCGTGAAACGAG...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAAGCAGGCCCTCCCCACTaGGGTCTTGGTCGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKAGPPH*GLGRGR
Trigger: TCGGCCACGACCAAGACCCCAGTGGGGAGGGCCTGC...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464896.5
3UTR CAA 72 bp AGCACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTaGGGTGCTCACTTTCCTTGGGTTTCTTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: STFSEPGCLGIQ*GAHFPWVSFSR
Trigger: TCTGGAGAAAGAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAAGTTGAGTTTTGGCACTaGTGGGAAAACTCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDEVEFWH*WENSVK
Trigger: TTTAACCGAGTTTTCCCATCAGTGCCAAAACTCAAC...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAGGTCTAAGGAAACTTTaGAGTGCCTCACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPGLRKL*SASPGM
Trigger: CATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACC...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCACAAGTGCAGGATGGATaGACAGATGCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPQVQDG*TDALSL
Trigger: AAGGGACAGTGCATCTGTTCATCCATCCTGCACTTG...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCACACCTGTTAAGACTATaGAACAGAAGCTGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPHLLRL*NRSWAL
Trigger: GAGCGCCCAGCTTCTGTTTCATAGTCTTAACAGGTG...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGGCTTCAGGTCTTGGTaGTGTTTTAGTGATAACAGT +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGGFRSW*CFSDNS
Trigger: ACTGTTATCACTAAAACAGCACCAAGACCTGAAGCC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTGGGAGCTGGGGAGACTaGCCCCTTGCAGAAGGTATA +
Preference number: 4 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVGSWGD*PLAEGI
Trigger: TATACCTTCTGCAAGGGGGCAGTCTCCCCAGCTCCC...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATGGCATCCAGTTGGGTaGTCACTTTCCTTGGGTTTC +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPWHPVG*SLSLGF
Trigger: GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCGCCTCACCTCCAGTTTaGAGCTGCCATCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTASPPV*SCHQTA
Trigger: TGCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGC...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTTACTCCTTCCTACCTaGCTTTCCTCCGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSLLLPT*LSSASP
Trigger: AGGTGAGGCGGAGGAAAGGCAGGTAGGAAGGAGTAA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTGGACACTGCCCTGTGTaGAGGGCTTCTTCTCCTACT +
Preference number: 4 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFGHCPV*RASSPT
Trigger: AGTAGGAGAAGAAGCCCTGCACACAGGGCAGTGTCC...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGGAGCTGGCTTTAAGGTaGACGCCGAGTGGGAATTCG +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLELALR*TPSGNS
Trigger: CGAATTCCCACTCGGCGTCCACCTTAAAGCCAGCTC...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAGCTTCTGCTTACAGGTaGCTTCCTTGTCTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPASAYR*LPCLFE
Trigger: CTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGC...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCCACTCCCACCCCAGCTaGAAAAACTCCAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTHSHPS*KNSSLW
Trigger: CCAAAGACTGGAGTTTTTCCAGCTGGGGTGGGAGTG...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCTTGAAGTGCCTCACCTaGAATGTTCTCTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFLKCLT*NVLSYP
Trigger: AGGATAAGAGAGAACATTCCAGGTGAGGCACTTCAA...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGCCAGCAGGAGTTTTCTaGCTGTGGACACTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLPAGVF*LWTLPC
Trigger: ACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGG...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGTCTTCTCACCTTTATaGCCGAGGTCTCTGTTCTAC +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSVFSPL*PRSLFY
Trigger: GTAGAACAGAGACCTCGGCCATAAAGGTGAGAAGAC...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTCTGAGAGCACACAATaGCAAAGGCATGGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSSESTQ*QRHGVR
Trigger: CCTCACCCCATGCCTTTGCCATTGTGTGCTCTCAGA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTCCAGGTGTCCCGAGTaGCAAAGTGCACAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSSRCPE*QSAQVV
Trigger: TACTACCTGTGCACTTTGCCACTCGGGACACCTGGA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTTCCTTGCTCCCTGGTaGTCTTCCTCAAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSFLAPW*SSSSAS
Trigger: TGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGGCAGCACAGCTGATGTaGAAACGCAGCAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMAAQLM*KRSKRQ
Trigger: CTGTCTCTTGCTGCGTTTTCACATCAGCTGTGCTGC...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCCACATTAGGTTACTTTaGCGTGTCAGTGTATTCGTA +
Preference number: 4 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFHIRLL*RVSVFV
Trigger: TACGAATACACTGACACGTCAAAGTAACCTAATGTG...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGAGACCAACGGGAACATaGGGATGTCAAACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSRPTGT*GCQTAR
Trigger: TCTGGCTGTTTGACATCCTCATGTTCCCGTTGGTCT...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGTGATCTTCCTCAAGTaGATCAAATCGACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLVIFLK*IKSTLL
Trigger: CAACAAGGTCGATTTGATGCACTTGAGGAAGATCAC...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCACACAAGATCACACATTaGAGTTTGTGGGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPHKITH*SLWVPV
Trigger: CACAGGCACCCACAAACTGCAATGTGTGATCTTGTG...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCCTTGGATGCTGCTTCTaGTTACAGGTGGCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTLGCCF*LQVASL
Trigger: CAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAG...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGCTGTTTTCTAATATTTaGATCCCCAACCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: AYRWLPCLFERWESPCPLLFSNI*IPNHRK
Trigger: TTTCCTATGGTTGGGGATGCAAATATTAGAAAACAG...CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCACACACAACAAACTGCTaGAGATACCACTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSHTTNC*RYHLGK
Trigger: CTTCCCTAAGTGGTATCTGCAGCAGTTTGTTGTGTG...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGCCTCCAGTTTGCAGCTaGCATCAAACTGCACACAAC +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSPPVCS*HQTAHN
Trigger: GTTGTGTGCAGTTTGATGGCAGCTGCAAACTGGAGG...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTATTTCAGGAAGGCTGTaGTCCAGGGGATGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFISGRL*SRGCEG
Trigger: ACCCTCACATCCCCTGGAGCACAGCCTTCCTGAAAT...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGCTGTGGCTCCAGATTTaGTGTAACATGTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSLWLQI*CNMSEG
Trigger: CCCCTCAGACATGTTACAGCAAATCTGGAGCCACAG...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCACCAGAACGTCCAAGATaGCCCATTGATTGTCAATCT +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPPERPR*PIDCQS
Trigger: AGATTGACAATCAATGGGCCATCTTGGACGTTCTGG...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAGGTCTCCCCGCCATTTaGTTTTCTTCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPGLPAI*FSSSSS
Trigger: AGAAGAAGAAGAAGAAAACCAAATGGCGGGGAGACC...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCATTGGGCCAAGGGTTGTaGTTAGAAATGGTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPLGQGL*LEMVSV
Trigger: CACTGAAACCATTTCTAACCACAACCCTTGGCCCAA...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCAAAAAACTCCAGTCTTTaGCTCACACCAGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPKNSSL*LTPAAP
Trigger: AGGTGCTGCTGGTGTGAGCCAAAGACTGGAGTTTTT...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGATTGAAGTGCCTCACCTaGAATGTTCTCTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRLKCLT*NVLSYP
Trigger: AGGATAAGAGAGAACATTCCAGGTGAGGCACTTCAA...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTATGCTCGTAGTGGTTaGTGCCCAGCAGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSYARSG*CPAGVF
Trigger: GAAAACTCCTGCTGGGCACCAACCACTACGAGCATA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGCCATGGAGTTCAACGTaGGCCAAGTGCAGGATGGAT +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMPWSST*AKCRMD
Trigger: ATCCATCCTGCACTTGGCCCACGTTGAACTCCATGG...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCACAATGGCAAAGGCATaGGGTGAGGGCATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTTMAKA*GEGISG
Trigger: TCCTGAAATGCCCTCACCCCATGCCTTTGCCATTGT...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATGGGAGTGGAGAGGATaGCTAGGATTATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPWEWRG*LGLSLE
Trigger: TTCCAGAGATAATCCTAGCCATCCTCTCCACTCCCA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTGTGGGTCATGTCTCCTaGAAAAGTGAGACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVVGHVS*KSETGP
Trigger: GGGGCCTGTCTCACTTTTCCAGGAGACATGACCCAC...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGTTCCTTGCTCCCTGGTaGTCTTCCTCAAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMFLAPW*SSSSAS
Trigger: TGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAA...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGCTTGCAGAAGGTATATaGGAGCCACACATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMLAEGI*EPHISP
Trigger: TGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAG...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTGGCCAGGCCACCTGCTaGGGATATTCTAGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVGQATC*GYSSLH
Trigger: ATGCAAACTAGAATATCCTCAGCAGGTGGCCTGGCC...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTAGACCAACGGGAACATaGGGATGTCAAACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFRPTGT*GCQTAR
Trigger: TCTGGCTGTTTGACATCCTCATGTTCCCGTTGGTCT...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAAGGCAGGAGAATCACGTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKGRRIT*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCACGTGATTCTCCTGCC...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614350.4
CDS-3UTR GCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAAGGAAGCCATCCCCCGTaGGCATGTATTGCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKGSHPP*ACIAPA
Trigger: TGCGGGAGCAATACATGCGCACGGGGGATGGCTTCC...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAGGCTTCAGGTCTTGGTaGTGTTTTAGTGATAACAGT +
Preference number: 4 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPGFRSW*CFSDNS
Trigger: ACTGTTATCACTAAAACAGCACCAAGACCTGAAGCC...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGTCAAATCGACCTTGTTaGCCACGAGGATCATCGGGA +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMSNRPC*PRGSSG
Trigger: TCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGA...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTACGGAATATTGTGTTTaGTCGCCATTTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGTEYCV*SPFLFL
Trigger: AAGGAAAAGAAATGGCGACCAAACACAATATTCCGT...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGCTCAGACATTGTGGATaGGGGGTAAGGGAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMLRHCG*GVRERS
Trigger: GCTTCTTTCCCTTACCCCCCATCCACAATGTCTGAG...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAATTGGCTCCTCGGTCATaGTGTGGCGTGGCCAACCAG +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKLAPRS*CGVANQ
Trigger: CTGGTTGGCCACGCCACACCATGACCGAGGAGCCAA...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGACAATGGCAAAGGCATaGGGTGAGGGCATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMTMAKA*GEGISG
Trigger: TCCTGAAATGCCCTCACCCCATGCCTTTGCCATTGT...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTGGGAGTGGAGAGGATaGCTAGGATTATCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSWEWRG*LGLSLE
Trigger: TTCCAGAGATAATCCTAGCCATCCTCTCCACTCCCA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCACACATTAGGTTACTTTaGCGTGTCAGTGTATTCGTA +
Preference number: 4 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSHIRLL*RVSVFV
Trigger: TACGAATACACTGACACGTCAAAGTAACCTAATGTG...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGCACAAGATCACACATTaGAGTTTGTGGGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMHKITH*SLWVPV
Trigger: CACAGGCACCCACAAACTGCAATGTGTGATCTTGTG...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGCACAAGATCACACATTaGAGTTTGTGGGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLHKITH*SLWVPV
Trigger: CACAGGCACCCACAAACTGCAATGTGTGATCTTGTG...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTCAGCTGCCATCAAACTaGACACAACAAACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFQLPSN*TQQTAA
Trigger: TGCAGCAGTTTGTTGTGTGCAGTTTGATGGCAGCTG...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGGACTATCAAACTCAGTaGTGTCGAGGAGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLDYQTQ*CRGVAA
Trigger: AGCTGCAACTCCTCGACAGCACTGAGTTTGATAGTC...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGAGGAGTCTTCAATGGTaGGGTCATAGTCAGGCACAA +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLRSLQW*GHSQAQ
Trigger: TTGTGCCTGACTATGACCCCACCATTGAAGACTCCT...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CCA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTTCAAATCGACCTTGTTaGCCACGAGGATCATCGGGA +
Preference number: 4 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVSNRPC*PRGSSG
Trigger: TCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGA...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGGCTTCTGCTTACAGGTaGCTTCCTTGTCTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMASAYR*LPCLFE
Trigger: CTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGC...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGGCTTCTGCTTACAGGTaGCTTCCTTGTCTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLASAYR*LPCLFE
Trigger: CTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGC...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGAGATCCAGCATGAACTaGAGTTTTCTGGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSRSSMN*SFLDGV
Trigger: GACACCATCCAGAAAACTCCAGTTCATGCTGGATCT...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATCTGTCCCAACTGTGTaGTTGAAATCCCTATGTCTT +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPSVPTV*LKSLCL
Trigger: AAGACATAGGGATTTCAACCACACAGTTGGGACAGA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCGGGGAAATGAGTTCATaGGAGATGAAAGCTTACCAG +
Preference number: 4 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTGEMSS*EMKAYQ
Trigger: CTGGTAAGCTTTCATCTCCCATGAACTCATTTCCCC...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAACCCCAGCCGTGGGAGTaGAGAGGATGGCTAGGATTA +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKPQPWE*RGWLGL
Trigger: TAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGG...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCGAATTTCAAACACAATaGGCTGCCAATGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTEFQTQ*AANGGN
Trigger: GTTCCCTCCATTGGCAGCCCATTGTGTTTGAAATTC...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGGTTGAGTTTTGGCACTaGTGGGAAAACTCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSVEFWH*WENSVK
Trigger: TTTAACCGAGTTTTCCCATCAGTGCCAAAACTCAAC...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGTCCCAACTGTGTGGTTaGAATCCCTATGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMSQLCG*NPYVFS
Trigger: TGAGAAGACATAGGGATTTCAACCACACAGTTGGGA...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCATTTTCCGGAATCTGTTaGCTAATTACTCTAACGAGG +
Preference number: 4 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPFSGIC*LITLTR
Trigger: CCTCGTTAGAGTAATTAGGCAACAGATTCCGGAAAA...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAAGGACACTGCCCTGTGTaGAGGGCTTCTTCTCCTACT +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKGHCPV*RASSPT
Trigger: AGTAGGAGAAGAAGCCCTGCACACAGGGCAGTGTCC...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGATCTTCTGGAAAAACTaGATGGTGAGGGCACTTTTG +
Preference number: 4 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSIFWKN*MVRALL
Trigger: CAAAAGTGCCCTCACCATCCAGTTTTTCCAGAAGAT...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CCA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTGTGGGTCCTTGGCACTaGTTTCTATGTACGGAATAT +
Preference number: 4 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFVGPWH*FLCTEY
Trigger: ATATTCCGTACATAGAAACCAGTGCCAAGGACCCAC...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATGTTGCAGCTCCACGGTaGGCATGGGGTATGCTCGTA +
Preference number: 4 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHVAAPR*AWGMLV
Trigger: TACGAGCATACCCCATGCCCACCGTGGAGCTGCAAC...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTTGTCTGAGGGGCCTTTaGGTTAAAGTTGCCACGTTA +
Preference number: 4 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVCLRGL*VKVATL
Trigger: TAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGGTTGAGTTTTGGCACTaGTGGGAAAACTCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMVEFWH*WENSVK
Trigger: TTTAACCGAGTTTTCCCATCAGTGCCAAAACTCAAC...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAAGGCCAGGCCACCTGCTaGGGATATTCTAGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKGQATC*GYSSLH
Trigger: ATGCAAACTAGAATATCCTCAGCAGGTGGCCTGGCC...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAAGCCTCACCTCCAGTTTaGAGCTGCCATCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKASPPV*SCHQTA
Trigger: TGCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGC...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTACTCTAACGAGGTCATaGAAGGCTTTGTCGACATTG +
Preference number: 4 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVTLTRS*KALSTL
Trigger: CAATGTCGACAAAGCCTTCCATGACCTCGTTAGAGT...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGGGGAAGCATAAGGATTaGGAAGAGCTTTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLGKHKD*EELCPF
Trigger: AAAAGGACAAAGCTCTTCCCAATCCTTATGCTTCCC...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAATTCCTTGCTCCCTGGTaGTCTTCCTCAAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKFLAPW*SSSSAS
Trigger: TGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAA...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAAAACTTCACCAGGCAGTaGGCCCAGACCCCTTTAATA +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKNFTRQ*AQTPLI
Trigger: TATTAAAGGGGTCTGGGCTCACTGCCTGGTGAAGTT...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAATCAAACACAATGGGCTaGCAATGGAGGGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKSNTMG*QWREPV
Trigger: GACAGGTTCCCTCCATTGGCAGCCCATTGTGTTTGA...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCCCACCCCAGCTaGAAAAACTCCAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHHSHPS*KNSSLW
Trigger: CCAAAGACTGGAGTTTTTCCAGCTGGGGTGGGAGTG...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTTTGAAGTGCCTCACCTaGAATGTTCTCTCTTATCCT +
Preference number: 4 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVLKCLT*NVLSYP
Trigger: AGGATAAGAGAGAACATTCCAGGTGAGGCACTTCAA...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGACGGAATATTGTGTTTaGTCGCCATTTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LQGKMASGLGAVLVITVLTEYCV*SPFLFL
Trigger: AAGGAAAAGAAATGGCGACCAAACACAATATTCCGT...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGACGGAATATTGTGTTTaGTCGCCATTTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMTEYCV*SPFLFL
Trigger: AAGGAAAAGAAATGGCGACCAAACACAATATTCCGT...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATACAATGGCAAAGGCATaGGGTGAGGGCATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHTMAKA*GEGISG
Trigger: TCCTGAAATGCCCTCACCCCATGCCTTTGCCATTGT...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAATGTCTGAGGGGCCTTTaGGTTAAAGTTGCCACGTTA +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKCLRGL*VKVATL
Trigger: TAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR TCA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAATCCCAACTGTGTGGTTaGAATCCCTATGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKSQLCG*NPYVFS
Trigger: TGAGAAGACATAGGGATTTCAACCACACAGTTGGGA...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATGACTATCAAACTCAGTaGTGTCGAGGAGTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHDYQTQ*CRGVAA
Trigger: AGCTGCAACTCCTCGACAGCACTGAGTTTGATAGTC...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATGTGATCTTCCTCAAGTaGATCAAATCGACCTTGTTG +
Preference number: 4 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHVIFLK*IKSTLL
Trigger: CAACAAGGTCGATTTGATGCACTTGAGGAAGATCAC...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR GCA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCTGTTTTCTAATATTTaGATCCCCAACCATAGGAAA +
Preference number: 4 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHLFSNI*IPNHRK
Trigger: TTTCCTATGGTTGGGGATGCAAATATTAGAAAACAG...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCATGGTGAGGGCACTTTaGCCCACACCCCCATCCCCC +
Preference number: 5 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAMVRAL*PTPPSP
Trigger: GGGGGATGGGGGTGTGGGCAAAAGTGCCCTCACCAT...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CAA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTAGGGCCCAAACTTCGTaGGGATGGATGCGACGGGGA +
Preference number: 5 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPRAQTS*GWMRRG
Trigger: TCCCCGTCGCATCCATCCCAACGAAGTTTGGGCCCT...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CAA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCAGGGCCCAAACTTCGTaGGGATGGATGCGACGGGGA +
Preference number: 5 (lower is better)
Translates to: EGSRGLARPPSLCPGPQARAQTS*GWMRRG
Trigger: TCCCCGTCGCATCCATCCCAACGAAGTTTGGGCCCT...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CAA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTTGTATGTGGGGAGGTaGTCACTGGGGACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: EGSRGLARPPSLCPGPQALYVGR*SLGTAL
Trigger: CAGCGCCGTCCCCAGTGACAACCTCCCCACATACAA...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CAA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTGGGGGCCAGGGGCACTaGGATGCTGCTTCTGCTTAC +
Preference number: 5 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPGGQGH*DAASAY
Trigger: GTAAGCAGAAGCAGCATCCAAGTGCCCCTGGCCCCC...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCCTTTCCCTCCCAGGTTaGACCCATGGCCTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: EGSRGLARPPSLCPGPQALSLPG*THGLRP
Trigger: AGGCCTCAGGCCATGGGTCAAACCTGGGAGGGAAAG...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCTTTCCCTCCCAGGTTaGACCCATGGCCTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPLSLPG*THGLRP
Trigger: AGGCCTCAGGCCATGGGTCAAACCTGGGAGGGAAAG...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTAGTGCTGTCGAGGAGTaGCAGCTCCACGGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPSAVEE*QLHGGH
Trigger: ATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACT...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCAGTGCTGTCGAGGAGTaGCAGCTCCACGGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: EGSRGLARPPSLCPGPQASAVEE*QLHGGH
Trigger: ATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACT...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGGTAGTAAGTGGCCATaGTCCCCAGCCGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQGSKWP*SPAVGV
Trigger: CACTCCCACGGCTGGGGACAATGGCCACTTACTACC...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGGTAGTAAGTGGCCATaGTCCCCAGCCGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAGSKWP*SPAVGV
Trigger: CACTCCCACGGCTGGGGACAATGGCCACTTACTACC...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCGGTAGTAAGTGGCCATaGTCCCCAGCCGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: GGVPRAGQATVTVPRASGGSKWP*SPAVGV
Trigger: CACTCCCACGGCTGGGGACAATGGCCACTTACTACC...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCGGGGAGACTGCCCCCTaGCAGAAGGTATATGAGAGC +
Preference number: 5 (lower is better)
Translates to: RWGGVPRAGQATVTVPRAGETAP*QKVYES
Trigger: GCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCCC...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGAGCCAGAAGTCCCAGTaGGCTCCTCGGTCATGGTGT +
Preference number: 5 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQSQKSQ*APRSWC
Trigger: ACACCATGACCGAGGAGCCAACTGGGACTTCTGGCT...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGTTGTATGTGGGGAGGTaGTCACTGGGGACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRLYVGR*SLGTAL
Trigger: CAGCGCCGTCCCCAGTGACAACCTCCCCACATACAA...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CAA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTATCACACATTGCAGTTaGTGGGTGCCTGTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPITHCS*WVPVAR
Trigger: CCGGGCCACAGGCACCCACAAACTGCAATGTGTGAT...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGCAGAACCCGGGTGTCTaGGCATCCAGTTGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRQNPGV*ASSWVL
Trigger: GAGCACCCAACTGGATGCCAAGACACCCGGGTTCTG...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAAGCCAGAAGTCCCAGTaGGCTCCTCGGTCATGGTGT +
Preference number: 5 (lower is better)
Translates to: WGGVPRAGQATVTVPRASSQKSQ*APRSWC
Trigger: ACACCATGACCGAGGAGCCAACTGGGACTTCTGGCT...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGCACTGGCTTGTCACTTaGTGCTCTTGTCTTCCCCGC +
Preference number: 5 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQHWLVT*CSCLPR
Trigger: GCGGGGAAGACAAGAGCACAAAGTGACAAGCCAGTG...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474559.1
CDS-3UTR CAA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCAATGACTCCCTGTCTTaGACGCGCAGGATAAGCTGG +
Preference number: 5 (lower is better)
Translates to: EGSRGLARPPSLCPGPQANDSLS*TRRISW
Trigger: CCAGCTTATCCTGCGCGTCAAAGACAGGGAGTCATT...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCAATGACTCCCTGTCTTaGACGCGCAGGATAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RWGGVPRAGQATVTVPRANDSLS*TRRISW
Trigger: CCAGCTTATCCTGCGCGTCAAAGACAGGGAGTCATT...GGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCATCAAATCGACCTTGTaGGCCACGAGGATCATCGGG +
Preference number: 5 (lower is better)
Translates to: VGRGPEGWPGHRHCAQGLIKSTL*ATRIIG
Trigger: CCCGATGATCCTCGTGGCCAACAAGGTCGATTTGAT...GAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGAAGGCTTTGTCGACATaGAGAGGTGGGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRKALST*RGGSLA
Trigger: TGCCAAGGACCCACCTCTCAATGTCGACAAAGCCTT...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCTCCTGTACCAAGTCCTaGGGCCAAGGGTTGTGGTTA +
Preference number: 5 (lower is better)
Translates to: GGVPRAGQATVTVPRASGSCTKS*GQGLWL
Trigger: TAACCACAACCCTTGGCCCAAGGACTTGGTACAGGA...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCGCCTCACCTCCAGTTaGCAGCTGCCATCAAACTGC +
Preference number: 5 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGRLTSS*QLPSNC
Trigger: GCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGCG...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTAATGACTCCCTGTCTTaGACGCGCAGGATAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPNDSLS*TRRISW
Trigger: CCAGCTTATCCTGCGCGTCAAAGACAGGGAGTCATT...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTTGCATCAAATCGACCTaGTTGGCCACGAGGATCATC +
Preference number: 5 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPCIKST*LATRII
Trigger: GATGATCCTCGTGGCCAACAAGGTCGATTTGATGCA...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGAGGTCTGCTGAACACTaGAAACTTCACCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GRGPEGWPGHRHCAQGLRRSAEH*KLHQAV
Trigger: CACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCT...CCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCAGGTCTGCTGAACACTaGAAACTTCACCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: EGSRGLARPPSLCPGPQARSAEH*KLHQAV
Trigger: CACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCT...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGAGGTCTGCTGAACACTaGAAACTTCACCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQRSAEH*KLHQAV
Trigger: CACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCT...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCGAAGGGGTCTGCTCATaGACTAGGCTTATAGAGGTG +
Preference number: 5 (lower is better)
Translates to: EGSRGLARPPSLCPGPQAEGVCS*TRLIEV
Trigger: CACCTCTATAAGCCTAGTCAATGAGCAGACCCCTTC...GGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCGAAGGGGTCTGCTCATaGACTAGGCTTATAGAGGTG +
Preference number: 5 (lower is better)
Translates to: GGVPRAGQATVTVPRASGEGVCS*TRLIEV
Trigger: CACCTCTATAAGCCTAGTCAATGAGCAGACCCCTTC...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS CCA 90 bp CCCCGCAGGCCTTCTGGGTGCACCGTTCCAGGGCCCAAACTTCGTTaGGATGGATGCGACGGGGACAGGCGACACTCGCGCACCATTTCA +
Preference number: 5 (lower is better)
Translates to: PRRPSGCTVPGPKLR*DGCDGDRRHSRTIS
Trigger: TGAAATGGTGCGCGAGTGTCGCCTGTCCCCGTCGCATCCATCCCAACGAAGTTTGGGCCCTGGAACGGTGCACCCAGAAGGCCTGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CAA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCATGCATCAAATCGACCTaGTTGGCCACGAGGATCATC +
Preference number: 5 (lower is better)
Translates to: WGGVPRAGQATVTVPRASCIKST*LATRII
Trigger: GATGATCCTCGTGGCCAACAAGGTCGATTTGATGCA...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTTCACAAGATCACACATaGCAGTTTGTGGGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: GGEGSRGLARPPSLCPGPSQDHT*QFVGAC
Trigger: ACAGGCACCCACAAACTGCAATGTGTGATCTTGTGA...AGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGTCACAAGATCACACATaGCAGTTTGTGGGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: GEGSRGLARPPSLCPGPQSQDHT*QFVGAC
Trigger: ACAGGCACCCACAAACTGCAATGTGTGATCTTGTGA...CTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTAGGTCTGCTGAACACTaGAAACTTCACCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPRSAEH*KLHQAV
Trigger: CACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCT...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGTGTCTTGGCATCCAGTaGGGTGCTCACTTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGCLGIQ*GAHFPW
Trigger: CCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACA...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCGGGTCTAAGGAAACTTaGAAGTGCCTCACCTGGAAT +
Preference number: 5 (lower is better)
Translates to: GGVPRAGQATVTVPRASGGSKET*KCLTWN
Trigger: ATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACCC...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS GCA 90 bp TCTTCCAGATCATGCCCCAGCGTCTCTCCCCGCAGGCCTTCTGGGTaGACCGTTCCAGGGCCCAAACTTCGTTGGGATGGATGCGACGGG +
Preference number: 5 (lower is better)
Translates to: SSRSCPSVSPRRPSG*TVPGPKLRWDGCDG
Trigger: CCCGTCGCATCCATCCCAACGAAGTTTGGGCCCTGGAACGGTGCACCCAGAAGGCCTGCGGGGAGAGACGCTGGGGCATGATCTGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CAA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGTCCAAGATGGCCCATaGATTGTCAATCTCCGTATG +
Preference number: 5 (lower is better)
Translates to: WGGVPRAGQATVTVPRASVQDGP*IVNLRM
Trigger: CATACGGAGATTGACAATCAATGGGCCATCTTGGAC...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CAA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGTGCATCAAATCGACCTaGTTGGCCACGAGGATCATC +
Preference number: 5 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGCIKST*LATRII
Trigger: GATGATCCTCGTGGCCAACAAGGTCGATTTGATGCA...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGTGCATCAAATCGACCTaGTTGGCCACGAGGATCATC +
Preference number: 5 (lower is better)
Translates to: VRWGGVPRAGQATVTVPRCIKST*LATRII
Trigger: GATGATCCTCGTGGCCAACAAGGTCGATTTGATGCA...CCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCATCCTGTACCAAGTCCTaGGGCCAAGGGTTGTGGTTA +
Preference number: 5 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPSCTKS*GQGLWL
Trigger: TAACCACAACCCTTGGCCCAAGGACTTGGTACAGGA...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCATTGAGAGGTGGGTCCTaGGCACTGGTTTCTATGTAC +
Preference number: 5 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPLRGGS*ALVSMY
Trigger: GTACATAGAAACCAGTGCCAAGGACCCACCTCTCAA...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCATCAGACCACACTGGCTaGTCACTTTGTGCTCTTGTC +
Preference number: 5 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPSDHTG*SLCALV
Trigger: GACAAGAGCACAAAGTGACAAGCCAGTGTGGTCTGA...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474559.1
CDS GCA 90 bp CACCAGCTTGTATGTGGGGAGGTTGTCACTGGGGACGGCGCTGGTTaGCATGTTTCTCGTAGGTCAGACCCGGGTCAGATCCGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: HQLVCGEVVTGDGAG*HVSRRSDPGQIRGA
Trigger: GGCACCACGGATCTGACCCGGGTCTGACCTACGAGAAACATGGCAACCAGCGCCGTCCCCAGTGACAACCTCCCCACATACAAGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000289104.8
CDS GCA 90 bp CCGTCACTGTGCCCAGGGCCTCAGGCCTGTCACAAGATCACACATTaGAGTTTGTGGGTGCCTGTGGCCCGGTCTCCCCGCCATTTGGTT +
Preference number: 5 (lower is better)
Translates to: PSLCPGPQACHKITH*SLWVPVARSPRHLV
Trigger: AACCAAATGGCGGGGAGACCGGGCCACAGGCACCCACAAACTGCAATGTGTGATCTTGTGACAGGCCTGAGGCCCTGGGCACAGTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCTCTATGTACGGAATATaGTGTTTGGTCGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: GGVPRAGQATVTVPRASGSMYGI*CLVAIS
Trigger: AGAAATGGCGACCAAACACAATATTCCGTACATAGA...GCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS GCA 90 bp GGTGGACGCCGAGTGGGAATTCGACTCGGCCTCTTTAAGAGCCTCTaGGCTCCAACCTTTAAATCTCCGCTCCGGCCGGGCCAACTTCTG +
Preference number: 5 (lower is better)
Translates to: GGRRVGIRLGLFKSL*APTFKSPLRPGQLL
Trigger: CAGAAGTTGGCCCGGCCGGAGCGGAGATTTAAAGGTTGGAGCGCAGAGGCTCTTAAAGAGGCCGAGTCGAATTCCCACTCGGCGTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS CCA 90 bp CAGGCCTTCTGGGTGCACCGTTCCAGGGCCCAAACTTCGTTGGGATaGATGCGACGGGGACAGGCGACACTCGCGCACCATTTCATTGTT +
Preference number: 5 (lower is better)
Translates to: QAFWVHRSRAQTSLG*MRRGQATLAHHFIV
Trigger: AACAATGAAATGGTGCGCGAGTGTCGCCTGTCCCCGTCGCATCCATCCCAACGAAGTTTGGGCCCTGGAACGGTGCACCCAGAAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS CCA 90 bp TCTTTCTTCCAGATCATGCCCCAGCGTCTCTCCCCGCAGGCCTTCTaGGTGCACCGTTCCAGGGCCCAAACTTCGTTGGGATGGATGCGA +
Preference number: 5 (lower is better)
Translates to: SFFQIMPQRLSPQAF*VHRSRAQTSLGWMR
Trigger: TCGCATCCATCCCAACGAAGTTTGGGCCCTGGAACGGTGCACCCAGAAGGCCTGCGGGGAGAGACGCTGGGGCATGATCTGGAAGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS CCA 90 bp TCAGATCCGTGGTGCCGGGGAGCTGGCTTTAAGGTGGACGCCGAGTaGGAATTCGACTCGGCCTCTTTAAGAGCCTCTGCGCTCCAACCT +
Preference number: 5 (lower is better)
Translates to: SDPWCRGAGFKVDAE*EFDSASLRASALQP
Trigger: AGGTTGGAGCGCAGAGGCTCTTAAAGAGGCCGAGTCGAATTCCCACTCGGCGTCCACCTTAAAGCCAGCTCCCCGGCACCACGGATCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS-3UTR CAA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCATACGGAATATTGTGTTaGGTCGCCATTTCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: WGGVPRAGQATVTVPRASYGILC*VAISFP
Trigger: AGGAAAAGAAATGGCGACCAAACACAATATTCCGTA...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCATCTATGTACGGAATATaGTGTTTGGTCGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: WGGVPRAGQATVTVPRASSMYGI*CLVAIS
Trigger: AGAAATGGCGACCAAACACAATATTCCGTACATAGA...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGGCCTTCTATGTACGGAATATaGTGTTTGGTCGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: RGPEGWPGHRHCAQGLRPSMYGI*CLVAIS
Trigger: AGAAATGGCGACCAAACACAATATTCCGTACATAGA...AGGCCTGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGCCTCAGTAAGGGAAAGAAGCTaGTTCATGGCTTGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: WGGVPRAGQATVTVPRASVRERS*FMACFV
Trigger: TACAAAACAAGCCATGAACAAGCTTCTTTCCCTTAC...TGAGGCCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGCAGAACCCGGGTGTCTaGGCATCCAGTTGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWQNPGV*ASSWVL
Trigger: GAGCACCCAACTGGATGCCAAGACACCCGGGTTCTG...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS TCA 90 bp GGACTGGCACCGTGTCTGATGCCTCAGCCAGATCAGTTCAATGCATaGGCCCAGGCCCTAGTTGTGACCACAGCTCCAGCTCCCCAAACC +
Preference number: 5 (lower is better)
Translates to: GLAPCLMPQPDQFNA*AQALVVTTAPAPQT
Trigger: GGTTTGGGGAGCTGGAGCTGTGGTCACAACTAGGGCCTGGGCTCATGCATTGAACTGATCTGGCTGAGGCATCAGACACGGTGCCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS GCA 90 bp CCTTCTGGGTGCACCGTTCCAGGGCCCAAACTTCGTTGGGATGGATaGGACGGGGACAGGCGACACTCGCGCACCATTTCATTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: PSGCTVPGPKLRWDG*DGDRRHSRTISLFQ
Trigger: CTGAAACAATGAAATGGTGCGCGAGTGTCGCCTGTCCCCGTCGCATCCATCCCAACGAAGTTTGGGCCCTGGAACGGTGCACCCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS GCA 90 bp GGTCAGGTCCAGGACAGAGTGAGTCCACACTGGCTTGTCACTTTGTaGTCTTGTCTTCCCCGCAGGGCAGGACTGGCACCGTGTCTGATG +
Preference number: 5 (lower is better)
Translates to: GQVQDRVSPHWLVTL*SCLPRRAGLAPCLM
Trigger: CATCAGACACGGTGCCAGTCCTGCCCTGCGGGGAAGACAAGAGCACAAAGTGACAAGCCAGTGTGGACTCACTCTGTCCTGGACCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS CCA 90 bp TCAGCCACCCTCTCTGGTCAGGTCCAGGACAGAGTGAGTCCACACTaGCTTGTCACTTTGTGCTCTTGTCTTCCCCGCAGGGCAGGACTG +
Preference number: 5 (lower is better)
Translates to: SATLSGQVQDRVSPH*LVTLCSCLPRRAGL
Trigger: CAGTCCTGCCCTGCGGGGAAGACAAGAGCACAAAGTGACAAGCCAGTGTGGACTCACTCTGTCCTGGACCTGACCAGAGAGGGTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS-3UTR CAA 90 bp TTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGGGTACGGAATATTGTGTTaGGTCGCCATTTCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LGGEGSRGLARPPSLCPGYGILC*VAISFP
Trigger: AGGAAAAGAAATGGCGACCAAACACAATATTCCGTA...CCCTGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTATCACACATTGCAGTTaGTGGGTGCCTGTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSITHCS*WVPVAR
Trigger: CCGGGCCACAGGCACCCACAAACTGCAATGTGTGAT...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGGGAGACTGCCCCCTaGCAGAAGGTATATGAGAGC +
Preference number: 5 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSGETAP*QKVYES
Trigger: GCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCCC...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAACAGAACCCGGGTGTCTaGGCATCCAGTTGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: RWLPCLFERWESPCPLGKQNPGV*ASSWVL
Trigger: GAGCACCCAACTGGATGCCAAGACACCCGGGTTCTG...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS TCA 90 bp TCCGAGCCTTGTCAGCCACCCTCTCTGGTCAGGTCCAGGACAGAGTaGGTCCACACTGGCTTGTCACTTTGTGCTCTTGTCTTCCCCGCA +
Preference number: 5 (lower is better)
Translates to: SEPCQPPSLVRSRTE*VHTGLSLCALVFPA
Trigger: TGCGGGGAAGACAAGAGCACAAAGTGACAAGCCAGTGTGGACTCACTCTGTCCTGGACCTGACCAGAGAGGGTGGCTGACAAGGCTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS CCA 90 bp TGCCCAGGGCCTCAGGCCTGTCACAAGATCACACATTGCAGTTTGTaGGTGCCTGTGGCCCGGTCTCCCCGCCATTTGGTTTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CPGPQACHKITHCSL*VPVARSPRHLVFFF
Trigger: GAAGAAGAAAACCAAATGGCGGGGAGACCGGGCCACAGGCACCCACAAACTGCAATGTGTGATCTTGTGACAGGCCTGAGGCCCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GAGGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTATCACACATTGCAGTTaGTGGGTGCCTGTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: EDVKQPEVPVGSSVMVWRITHCS*WVPVAR
Trigger: CCGGGCCACAGGCACCCACAAACTGCAATGTGTGAT...ACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CAGTTAGGTGGGGAGGGGTCCCGAGGGCTGGCCAGGCCACCGTCACTGTGCCCAGTAAGGGAAAGAAGCTaGTTCATGGCTTGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: QLGGEGSRGLARPPSLCPVRERS*FMACFV
Trigger: TACAAAACAAGCCATGAACAAGCTTCTTTCCCTTAC...TGGGCACAGTGACGGTGGCCTGGCCAGCCCTCGGGACCCCTCCCCACCTAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGCGCCTCACCTCCAGTTaGCAGCTGCCATCAAACTGC +
Preference number: 5 (lower is better)
Translates to: AYRWLPCLFERWESPCPLRLTSS*QLPSNC
Trigger: GCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGCG...CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS GCA 90 bp CACCAGCTTGTATGTGGGGAGGTTGTCACTGGGGACGGCGCTGGTTaGCATGTTTCTCGTAGGTCAGACCATGAAAGGGTCTCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: HQLVCGEVVTGDGAG*HVSRRSDHERVSLS
Trigger: GCTCAGAGAGACCCTTTCATGGTCTGACCTACGAGAAACATGGCAACCAGCGCCGTCCCCAGTGACAACCTCCCCACATACAAGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475711.5
CDS CCA 90 bp AAACCTCTGGAGGCCACGATTCCGAGCCTTGTCAGCCACCCTCTCTaGTCAGGTCCAGGACAGAGTGAGTCCACACTGGCTTGTCACTTT +
Preference number: 5 (lower is better)
Translates to: KPLEATIPSLVSHPL*SGPGQSESTLACHF
Trigger: AAAGTGACAAGCCAGTGTGGACTCACTCTGTCCTGGACCTGACCAGAGAGGGTGGCTGACAAGGCTCGGAATCGTGGCCTCCAGAGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS-3UTR CAA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAATTGTATGTGGGGAGGTaGTCACTGGGGACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDELYVGR*SLGTAL
Trigger: CAGCGCCGTCCCCAGTGACAACCTCCCCACATACAA...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CAA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTAATGACTCCCTGTCTTaGACGCGCAGGATAAGCTGG +
Preference number: 5 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSNDSLS*TRRISW
Trigger: CCAGCTTATCCTGCGCGTCAAAGACAGGGAGTCATT...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGGGGCCAGGGGCACTaGGATGCTGCTTCTGCTTAC +
Preference number: 5 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLGGQGH*DAASAY
Trigger: GTAAGCAGAAGCAGCATCCAAGTGCCCCTGGCCCCC...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGTGTCTTGGCATCCAGTaGGGTGCTCACTTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVCLGIQ*GAHFPW
Trigger: CCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACA...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCAGTGCTGTCGAGGAGTaGCAGCTCCACGGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGSAVEE*QLHGGH
Trigger: ATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACT...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTAGCCAGAAGTCCCAGTaGGCTCCTCGGTCATGGTGT +
Preference number: 5 (lower is better)
Translates to: KWPLSPAVGVERMARIISSQKSQ*APRSWC
Trigger: ACACCATGACCGAGGAGCCAACTGGGACTTCTGGCT...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS GCA 90 bp CACCAGCTTGTATGTGGGGAGGTTGTCACTGGGGACGGCGCTGGTTaGCATGTTTCTCGTAGGTCAGACCACACTGGCTTGTCACTTTGT +
Preference number: 5 (lower is better)
Translates to: HQLVCGEVVTGDGAG*HVSRRSDHTGLSLC
Trigger: ACAAAGTGACAAGCCAGTGTGGTCTGACCTACGAGAAACATGGCAACCAGCGCCGTCCCCAGTGACAACCTCCCCACATACAAGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474559.1
CDS-3UTR CAA 90 bp GCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGATCAAATCGACCTTGTaGGCCACGAGGATCATCGGG +
Preference number: 5 (lower is better)
Translates to: AYRWLPCLFERWESPCPLIKSTL*ATRIIG
Trigger: CCCGATGATCCTCGTGGCCAACAAGGTCGATTTGAT...CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGTTGAGAGGTGGGTCCTaGGCACTGGTTTCTATGTAC +
Preference number: 5 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVLRGGS*ALVSMY
Trigger: GTACATAGAAACCAGTGCCAAGGACCCACCTCTCAA...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGATGTCAAACAGCCAGAAGTCCCAGTTGGCTCCTCGGTCATGGTGTGGCGTGGGAAGGGGTCTGCTCATaGACTAGGCTTATAGAGGTG +
Preference number: 5 (lower is better)
Translates to: GCQTARSPSWLLGHGVAWEGVCS*TRLIEV
Trigger: CACCTCTATAAGCCTAGTCAATGAGCAGACCCCTTC...CCACGCCACACCATGACCGAGGAGCCAACTGGGACTTCTGGCTGTTTGACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGGGGGAGACTGCCCCCTaGCAGAAGGTATATGAGAGC +
Preference number: 5 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWGETAP*QKVYES
Trigger: GCTCTCATATACCTTCTGCAAGGGGGCAGTCTCCCC...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCCGCCTCACCTCCAGTTaGCAGCTGCCATCAAACTGC +
Preference number: 5 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGRLTSS*QLPSNC
Trigger: GCAGTTTGATGGCAGCTGCAAACTGGAGGTGAGGCG...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTTACTCCGCCATGCTCTaGATTCTGAGCATCTCCATC +
Preference number: 5 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSYSAML*ILSISI
Trigger: GATGGAGATGCTCAGAATCAAGAGCATGGCGGAGTA...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTAGTAAGTGGCCATaGTCCCCAGCCGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRGSKWP*SPAVGV
Trigger: CACTCCCACGGCTGGGGACAATGGCCACTTACTACC...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAATGCATCAAATCGACCTaGTTGGCCACGAGGATCATC +
Preference number: 5 (lower is better)
Translates to: RWLPCLFERWESPCPLGKCIKST*LATRII
Trigger: GATGATCCTCGTGGCCAACAAGGTCGATTTGATGCA...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGTTGAGAGGTGGGTCCTaGGCACTGGTTTCTATGTAC +
Preference number: 5 (lower is better)
Translates to: AYRWLPCLFERWESPCPLLRGGS*ALVSMY
Trigger: GTACATAGAAACCAGTGCCAAGGACCCACCTCTCAA...CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAAAAGGCTTTGTCGACATaGAGAGGTGGGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: PALLPSCTKSLGQGLWLEKALST*RGGSLA
Trigger: TGCCAAGGACCCACCTCTCAATGTCGACAAAGCCTT...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTTCACAAGATCACACATaGCAGTTTGTGGGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSSQDHT*QFVGAC
Trigger: ACAGGCACCCACAAACTGCAATGTGTGATCTTGTGA...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTTCCTGTACCAAGTCCTaGGGCCAAGGGTTGTGGTTA +
Preference number: 5 (lower is better)
Translates to: KWPLSPAVGVERMARIISSCTKS*GQGLWL
Trigger: TAACCACAACCCTTGGCCCAAGGACTTGGTACAGGA...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCACTTTCCCTCCCAGGTTaGACCCATGGCCTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPLSLPG*THGLRP
Trigger: AGGCCTCAGGCCATGGGTCAAACCTGGGAGGGAAAG...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS CCA 90 bp CACCAGAGCCTTCCGAAGCCCAGGACAGCCACGTGGCCAAAAGCATaGACTTCAGATATGATCTTGGGCAAGCTGTTGGCTCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: HQSLPKPRTATWPKA*TSDMILGKLLALFH
Trigger: GTGAAAAAGAGCCAACAGCTTGCCCAAGATCATATCTGAAGTCCATGCTTTTGGCCACGTGGCTGTCCTGGGCTTCGGAAGGCTCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS-3UTR CAA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCAATGACTCCCTGTCTTaGACGCGCAGGATAAGCTGG +
Preference number: 5 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFNDSLS*TRRISW
Trigger: CCAGCTTATCCTGCGCGTCAAAGACAGGGAGTCATT...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTAAGGCTTTGTCGACATaGAGAGGTGGGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGKALST*RGGSLA
Trigger: TGCCAAGGACCCACCTCTCAATGTCGACAAAGCCTT...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CCTTGCAGAAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAATCACACATTGCAGTTaGTGGGTGCCTGTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PCRRYMRATHQPSLPYFSITHCS*WVPVAR
Trigger: CCGGGCCACAGGCACCCACAAACTGCAATGTGTGAT...TGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTTCTGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGTCTCTCTCAGGCACCATGGAGTTCAACGTGGGCCAAGTGCAGGATGGATGAATCCTGTACCAAGTCCTaGGGCCAAGGGTTGTGGTTA +
Preference number: 5 (lower is better)
Translates to: SLSQAPWSSTWAKCRMDESCTKS*GQGLWL
Trigger: TAACCACAACCCTTGGCCCAAGGACTTGGTACAGGA...TTCATCCATCCTGCACTTGGCCCACGTTGAACTCCATGGTGCCTGAGAGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTCAGTCATGAGGGCAGAGGTGGTAGTCAGTaGACTCCAAGGGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: AHSTLYSGLSGSYLSHEGRGGSQ*TPREDG
Trigger: GCCATCTTCCCTTGGAGTCAACTGACTACCACCTCT...GCCCTCATGACTGAGGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCGGGTGCTCACTTTCCTaGGGTTTCTTTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATGCSLS*GFFLQS
Trigger: ACTCTGGAGAAAGAAACCCAAGGAAAGTGAGCACCC...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TGTCTGAGGGGCCTTTGGGTTAAAGTTGCCACGTTAGTGGGTCATGTCTCCTGGTGTCTTGGCATCCAGTaGGGTGCTCACTTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: CLRGLWVKVATLVGHVSWCLGIQ*GAHFPW
Trigger: CCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACA...CCAGGAGACATGACCCACTAACGTGGCAACTTTAACCCAAAGGCCCCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGGTCTAAGGAAACTTaGAAGTGCCTCACCTGGAAT +
Preference number: 5 (lower is better)
Translates to: AYRWLPCLFERWESPCPLGSKET*KCLTWN
Trigger: ATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACCC...CAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCTGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AAGTGGCCATTGTCCCCAGCCGTGGGAGTGGAGAGGATGGCTAGGATTATCTCTTACTCCGCCATGCTCTaGATTCTGAGCATCTCCATC +
Preference number: 5 (lower is better)
Translates to: KWPLSPAVGVERMARIISYSAML*ILSISI
Trigger: GATGGAGATGCTCAGAATCAAGAGCATGGCGGAGTA...AGAGATAATCCTAGCCATCCTCTCCACTCCCACGGCTGGGGACAATGGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCTACTCCGCCATGCTCTaGATTCTGAGCATCTCCATC +
Preference number: 5 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATYSAML*ILSISI
Trigger: GATGGAGATGCTCAGAATCAAGAGCATGGCGGAGTA...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CCTGCCCTTCTCCCTTCCTGTACCAAGTCCTTGGGCCAAGGGTTGTGGTTAGAATACTCCGCCATGCTCTaGATTCTGAGCATCTCCATC +
Preference number: 5 (lower is better)
Translates to: PALLPSCTKSLGQGLWLEYSAML*ILSISI
Trigger: GATGGAGATGCTCAGAATCAAGAGCATGGCGGAGTA...TTCTAACCACAACCCTTGGCCCAAGGACTTGGTACAGGAAGGGAGAAGGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS CCA 90 bp CTTAAAGTCATATCTCCATCTTACTTCTGCTGCCAGACAAACCTCTaGAGGCCACGATTCCGAGCCTTGTCAGCCACCCTCTCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: LKVISPSYFCCQTNL*RPRFRALSATLSGQ
Trigger: CTGACCAGAGAGGGTGGCTGACAAGGCTCGGAATCGTGGCCTCCAGAGGTTTGTCTGGCAGCAGAAGTAAGATGGAGATATGACTTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000477784.1
CDS-3UTR CAA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTATGGTGAGGGCACTTTaGCCCACACCCCCATCCCCC +
Preference number: 5 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFMVRAL*PTPPSP
Trigger: GGGGGATGGGGGTGTGGGCAAAAGTGCCCTCACCAT...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CAA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGAAGGCTTTGTCGACATaGAGAGGTGGGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLKALST*RGGSLA
Trigger: TGCCAAGGACCCACCTCTCAATGTCGACAAAGCCTT...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGAAGGGGTCTGCTCATaGACTAGGCTTATAGAGGTG +
Preference number: 5 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGEGVCS*TRLIEV
Trigger: CACCTCTATAAGCCTAGTCAATGAGCAGACCCCTTC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGGATGTCACGGGGCACACTCTACACTCTACTCTGGCCTATCTGGAAGCTACCGTCCCAACTGTGTGGTaGAAATCCCTATGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: RDVTGHTLHSTLAYLEATVPTVW*KSLCLL
Trigger: GAGAAGACATAGGGATTTCAACCACACAGTTGGGAC...GGTAGCTTCCAGATAGGCCAGAGTAGAGTGTAGAGTGTGCCCCGTGACATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGGTTTCGTCCAAGATGGCCCATaGATTGTCAATCTCCGTATG +
Preference number: 5 (lower is better)
Translates to: FRTRVSWHPVGCSLSLGFVQDGP*IVNLRM
Trigger: CATACGGAGATTGACAATCAATGGGCCATCTTGGAC...GAAACCCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CAA 90 bp CCACGGTGGGCATGGGGTATGCTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTTACGGAATATTGTGTTaGGTCGCCATTTCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: PRWAWGMLVVVGAQQEFSYGILC*VAISFP
Trigger: AGGAAAAGAAATGGCGACCAAACACAATATTCCGTA...AGAAAACTCCTGCTGGGCACCAACCACTACGAGCATACCCCATGCCCACCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CTCGTAGTGGTTGGTGCCCAGCAGGAGTTTTCTGGCTGTGGACACTGCCCTGTGTCTATGTACGGAATATaGTGTTTGGTCGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: LVVVGAQQEFSGCGHCPVSMYGI*CLVAIS
Trigger: AGAAATGGCGACCAAACACAATATTCCGTACATAGA...CACAGGGCAGTGTCCACAGCCAGAAAACTCCTGCTGGGCACCAACCACTACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCATCCTGTACCAAGTCCTaGGGCCAAGGGTTGTGGTTA +
Preference number: 5 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPSCTKS*GQGLWL
Trigger: TAACCACAACCCTTGGCCCAAGGACTTGGTACAGGA...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTGGGGGCCAGGGGCACTaGGATGCTGCTTCTGCTTAC +
Preference number: 5 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVGGQGH*DAASAY
Trigger: GTAAGCAGAAGCAGCATCCAAGTGCCCCTGGCCCCC...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAAGAGGTGGTAGTCAGTaGACTCCAAGGGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPRGGSQ*TPREDG
Trigger: GCCATCTTCCCTTGGAGTCAACTGACTACCACCTCT...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGAGTGCTGTCGAGGAGTaGCAGCTCCACGGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: LQGKMASGLGAVLVITVLSAVEE*QLHGGH
Trigger: ATGCCCACCGTGGAGCTGCAACTCCTCGACAGCACT...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTGTCCCAACTGTGTGGTaGAAATCCCTATGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGVPTVW*KSLCLL
Trigger: GAGAAGACATAGGGATTTCAACCACACAGTTGGGAC...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTCTCCCCACTGGGGTCTaGGTCGTGGCCGATTTCACG +
Preference number: 5 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVLPTGV*VVADFT
Trigger: CGTGAAATCGGCCACGACCAAGACCCCAGTGGGGAG...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000464896.5
CDS GCA 90 bp TTGGTCGCCATTTCTTTTCCTTGCTCCCTGGTGATCTTCCTCAAGTaGATCAAATCGACCTTGTTGGCCACGAGGATCATCGGGAATGAC +
Preference number: 5 (lower is better)
Translates to: LVAISFPCSLVIFLK*IKSTLLATRIIGND
Trigger: GTCATTCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAAAAGAAATGGCGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000494949.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGTCACAAGATCACACATaGCAGTTTGTGGGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLSQDHT*QFVGAC
Trigger: ACAGGCACCCACAAACTGCAATGTGTGATCTTGTGA...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGTGGCTTCCTTGTCTCTTTGAGAGGTGGGAAAGCCCGTGCCCTCTGGGCAAAGTAAGGGAAAGAAGCTaGTTCATGGCTTGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: RWLPCLFERWESPCPLGKVRERS*FMACFV
Trigger: TACAAAACAAGCCATGAACAAGCTTCTTTCCCTTAC...TTTGCCCAGAGGGCACGGGCTTTCCCACCTCTCAAAGAGACAAGGAAGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTCTTTCCCTCCCAGGTTaGACCCATGGCCTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVLSLPG*THGLRP
Trigger: AGGCCTCAGGCCATGGGTCAAACCTGGGAGGGAAAG...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGAGGGTCTAAGGAAACTTaGAAGTGCCTCACCTGGAAT +
Preference number: 5 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRGSKET*KCLTWN
Trigger: ATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACCC...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CACATTTTCAGAACCCGGGTGTCTTGGCATCCAGTTGGGTGCTCACTTTCCTTGGTCCCAACTGTGTGGTaGAAATCCCTATGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: HIFRTRVSWHPVGCSLSLVPTVW*KSLCLL
Trigger: GAGAAGACATAGGGATTTCAACCACACAGTTGGGAC...CAAGGAAAGTGAGCACCCAACTGGATGCCAAGACACCCGGGTTCTGAAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTAGCCAGAAGTCCCAGTaGGCTCCTCGGTCATGGTGT +
Preference number: 5 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFSQKSQ*APRSWC
Trigger: ACACCATGACCGAGGAGCCAACTGGGACTTCTGGCT...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCAATGACTCCCTGTCTTaGACGCGCAGGATAAGCTGG +
Preference number: 5 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTNDSLS*TRRISW
Trigger: CCAGCTTATCCTGCGCGTCAAAGACAGGGAGTCATT...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCAGGGTGCTCACTTTCCTaGGGTTTCTTTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPGCSLS*GFFLQS
Trigger: ACTCTGGAGAAAGAAACCCAAGGAAAGTGAGCACCC...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS TCA 90 bp ACGGAATATTGTGTTTGGTCGCCATTTCTTTTCCTTGCTCCCTGGTaGTCTTCCTCAAGTGCATCAAATCGACCTTGTTGGCCACGAGGA +
Preference number: 5 (lower is better)
Translates to: TEYCVWSPFLFLAPW*SSSSASNRPCWPRG
Trigger: TCCTCGTGGCCAACAAGGTCGATTTGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAAAAGAAATGGCGACCAAACACAATATTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000494949.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAAATGGTGAGGGCACTTTaGCCCACACCCCCATCCCCC +
Preference number: 5 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKMVRAL*PTPPSP
Trigger: GGGGGATGGGGGTGTGGGCAAAAGTGCCCTCACCAT...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CAA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGATCAAATCGACCTTGTaGGCCACGAGGATCATCGGG +
Preference number: 5 (lower is better)
Translates to: LQGKMASGLGAVLVITVLIKSTL*ATRIIG
Trigger: CCCGATGATCCTCGTGGCCAACAAGGTCGATTTGAT...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTATCAAATCGACCTTGTaGGCCACGAGGATCATCGGG +
Preference number: 5 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFIKSTL*ATRIIG
Trigger: CCCGATGATCCTCGTGGCCAACAAGGTCGATTTGAT...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGCAAAGTCCTAAGAGAAACCATCCAGGTGTCCCGAGTGGCAAAGTGCACAGGTTACGGAATATTGTGTTaGGTCGCCATTTCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: GKVLRETIQVSRVAKCTGYGILC*VAISFP
Trigger: AGGAAAAGAAATGGCGACCAAACACAATATTCCGTA...ACCTGTGCACTTTGCCACTCGGGACACCTGGATGGTTTCTCTTAGGACTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCTTGAGAGGTGGGTCCTaGGCACTGGTTTCTATGTAC +
Preference number: 5 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTLRGGS*ALVSMY
Trigger: GTACATAGAAACCAGTGCCAAGGACCCACCTCTCAA...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TGTTCTACATCAGCTGATCTGCTTCCAGTGAGACTATCAAACTCAGTGCTGTCGTTGAGAGGTGGGTCCTaGGCACTGGTTTCTATGTAC +
Preference number: 5 (lower is better)
Translates to: CSTSADLLPVRLSNSVLSLRGGS*ALVSMY
Trigger: GTACATAGAAACCAGTGCCAAGGACCCACCTCTCAA...CGACAGCACTGAGTTTGATAGTCTCACTGGAAGCAGATCAGCTGATGTAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCAGGTCTGCTGAACACTaGAAACTTCACCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTRSAEH*KLHQAV
Trigger: CACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCT...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCGGGTGCTCACTTTCCTaGGGTTTCTTTCTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTGCSLS*GFFLQS
Trigger: ACTCTGGAGAAAGAAACCCAAGGAAAGTGAGCACCC...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CAGAAGGTTCAAACATCACTGAGATCTTCAGGCATCACTCGTTTCACGACAATGTGTCTTGGCATCCAGTaGGGTGCTCACTTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: QKVQTSLRSSGITRFTTMCLGIQ*GAHFPW
Trigger: CCAAGGAAAGTGAGCACCCAACTGGATGCCAAGACA...CATTGTCGTGAAACGAGTGATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TCAACAGCAGAGGATACAGAAGACCAACCCTTAACTAGTCTCTCTCAGGCACCAGGGTCTAAGGAAACTTaGAAGTGCCTCACCTGGAAT +
Preference number: 5 (lower is better)
Translates to: STAEDTEDQPLTSLSQAPGSKET*KCLTWN
Trigger: ATTCCAGGTGAGGCACTTCAAAGTTTCCTTAGACCC...TGGTGCCTGAGAGAGACTAGTTAAGGGTTGGTCTTCTGTATCCTCTGCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS TCA 90 bp TACACCATAAACTACAGAGAGAAGCTAACTGGCTGCTGGGCAGTGTaGACAGACCTAAGGGTGAAAACCATTGCCCGAAACATTTTCAGC +
Preference number: 5 (lower is better)
Translates to: YTINYREKLTGCWAV*TDLRVKTIARNIFS
Trigger: GCTGAAAATGTTTCGGGCAATGGTTTTCACCCTTAGGTCTGTTCACACTGCCCAGCAGCCAGTTAGCTTCTCTCTGTAGTTTATGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS TCA 90 bp TGGCACTGGTTTCTATGTACGGAATCTGGAAGGCAAAGCTCAACTTaGTCAAAGTGGCACAGAGATCCTCAAAGCCCTGTTACACCCTTA +
Preference number: 5 (lower is better)
Translates to: WHWFLCTESGRQSST*SKWHRDPQSPVTPL
Trigger: TAAGGGTGTAACAGGGCTTTGAGGATCTCTGTGCCACTTTGATCAAGTTGAGCTTTGCCTTCCAGATTCCGTACATAGAAACCAGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478647.1
CDS-3UTR CAA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGATACGGAATATTGTGTTaGGTCGCCATTTCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRYGILC*VAISFP
Trigger: AGGAAAAGAAATGGCGACCAAACACAATATTCCGTA...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AGGGGCACTTGGATGCTGCTTCTGCTTACAGGTGGCTTCCTTGTCTCTTTGAGATCTATGTACGGAATATaGTGTTTGGTCGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: RGTWMLLLLTGGFLVSLRSMYGI*CLVAIS
Trigger: AGAAATGGCGACCAAACACAATATTCCGTACATAGA...TCTCAAAGAGACAAGGAAGCCACCTGTAAGCAGAAGCAGCATCCAAGTGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GTGTCCACATTAGGTTACTTTGACGTGTCAGTGTATTCGTATCAGAGAGGCACCTCACAAGATCACACATaGCAGTTTGTGGGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: VSTLGYFDVSVYSYQRGTSQDHT*QFVGAC
Trigger: ACAGGCACCCACAAACTGCAATGTGTGATCTTGTGA...GGTGCCTCTCTGATACGAATACACTGACACGTCAAAGTAACCTAATGTGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GACTTAATAAAAAGTTACACAGAAGGTTCAAACATCACTGAGATCTTCAGGCATGGGGGCCAGGGGCACTaGGATGCTGCTTCTGCTTAC +
Preference number: 5 (lower is better)
Translates to: DLIKSYTEGSNITEIFRHGGQGH*DAASAY
Trigger: GTAAGCAGAAGCAGCATCCAAGTGCCCCTGGCCCCC...ATGCCTGAAGATCTCAGTGATGTTTGAACCTTCTGTGTAACTTTTTATTAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp TTTAGAACTGACATGCTCATGACAGCCACTCCCCTCAGCAAAATACAATCTGTTAGAGGTGGTAGTCAGTaGACTCCAAGGGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: FRTDMLMTATPLSKIQSVRGGSQ*TPREDG
Trigger: GCCATCTTCCCTTGGAGTCAACTGACTACCACCTCT...AACAGATTGTATTTTGCTGAGGGGAGTGGCTGTCATGAGCATGTCAGTTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp CTCCAAGGGAAGATGGCTTCAGGTCTTGGTGCTGTTTTAGTGATAACAGTATTGGTCCAAGATGGCCCATaGATTGTCAATCTCCGTATG +
Preference number: 5 (lower is better)
Translates to: LQGKMASGLGAVLVITVLVQDGP*IVNLRM
Trigger: CATACGGAGATTGACAATCAATGGGCCATCTTGGAC...CAATACTGTTATCACTAAAACAGCACCAAGACCTGAAGCCATCTTCCCTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000423968.7
CDS-3UTR CAA 90 bp ATGTTACCAGAGAGGTCTGCTGAACACTTGAAACTTCACCAGGCAGTGAGCCCAGTAAGGGAAAGAAGCTaGTTCATGGCTTGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: MLPERSAEHLKLHQAVSPVRERS*FMACFV
Trigger: TACAAAACAAGCCATGAACAAGCTTCTTTCCCTTAC...TGGGCTCACTGCCTGGTGAAGTTTCAAGTGTTCAGCAGACCTCTCTGGTAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTGTCCCAACTGTGTGGTaGAAATCCCTATGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFVPTVW*KSLCLL
Trigger: GAGAAGACATAGGGATTTCAACCACACAGTTGGGAC...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS GCA 90 bp GAGCAAATCCACTTCAAGTGCCTGGTCTTTGGAAGCCCTGTTGGTTaGTGTTATTACAGTGGAGTTTCAGAGCTCTTAAAGTCATATCTC +
Preference number: 5 (lower is better)
Translates to: EQIHFKCLVFGSPVG*CYYSGVSELLKSYL
Trigger: GAGATATGACTTTAAGAGCTCTGAAACTCCACTGTAATAACAGCAACCAACAGGGCTTCCAAAGACCAGGCACTTGAAGTGGATTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000477784.1
CDS GCA 90 bp GTTTCTATGTACGGAATATTGTGTTTGGTCGCCATTTCTTTTCCTTaGTCCCTGGTGATCTTCCTCAAGTGCATCAAATCGACCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VSMYGILCLVAISFP*SLVIFLKCIKSTLL
Trigger: CAACAAGGTCGATTTGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAAAAGAAATGGCGACCAAACACAATATTCCGTACATAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000494949.5
ENST00000614350.4
ENST00000621127.4
CDS CCA 90 bp ATTGATTGTCAATCTCCGTATGTTTCAGGTAGGAGTCTTCAATGGTaGGGTCATAGTCAGGCACAAAGATCTTCTGGAAAAACTGGATGG +
Preference number: 5 (lower is better)
Translates to: IDCQSPYVSGRSLQW*GHSQAQRSSGKTGW
Trigger: CCATCCAGTTTTTCCAGAAGATCTTTGTGCCTGACTATGACCCCACCATTGAAGACTCCTACCTGAAACATACGGAGATTGACAATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000474559.1
CDS-3UTR CAA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAAATCAAATCGACCTTGTaGGCCACGAGGATCATCGGG +
Preference number: 5 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKIKSTL*ATRIIG
Trigger: CCCGATGATCCTCGTGGCCAACAAGGTCGATTTGAT...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAAAAGGCTTTGTCGACATaGAGAGGTGGGTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKKALST*RGGSLA
Trigger: TGCCAAGGACCCACCTCTCAATGTCGACAAAGCCTT...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS-3UTR CAA 90 bp AAGGTATATGAGAGCCACACATCAGCCCAGCCTTCCTTACTTCTCAGATCATTTTACGGAATATTGTGTTaGGTCGCCATTTCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: KVYESHTSAQPSLLLRSFYGILC*VAISFP
Trigger: AGGAAAAGAAATGGCGACCAAACACAATATTCCGTA...AAATGATCTGAGAAGTAAGGAAGGCTGGGCTGATGTGTGGCTCTCATATACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000614350.4
ENST00000621127.4
CDS CCA 90 bp CCCAATAGCCTCAAGCATCATTTAGGGCTTTTCACTCTTTCAGGTTaGAAAGTGTTACTAATGGCTTTTCCAATTCCCTCTTGTTCTCTA +
Preference number: 5 (lower is better)
Translates to: PNSLKHHLGLFTLSG*KVLLMAFPIPSCSL
Trigger: TAGAGAACAAGAGGGAATTGGAAAAGCCATTAGTAACACTTTCCAACCTGAAAGAGTGAAAAGCCCTAAATGATGCTTGAGGCTATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478647.1
CDS-3UTR CAA 90 bp GGTAAGGGAAAGAAGCTTGTTCATGGCTTGTTTTGTACTTTGTATGTGGATAAATCTATGTACGGAATATaGTGTTTGGTCGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: GKGKKLVHGLFCTLYVDKSMYGI*CLVAIS
Trigger: AGAAATGGCGACCAAACACAATATTCCGTACATAGA...TTTATCCACATACAAAGTACAAAACAAGCCATGAACAAGCTTCTTTCCCTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000614350.4
ENST00000621127.4
CDS CCA 72 bp GCGGCGCGCAGGCCCTCCCCACTGGGGTCTTGGTCGTaGCCGATTTCACGAACGCACACCGTTACGCGGGAG +
Preference number: 6 (lower is better)
Translates to: AARRPSPLGSWS*PISRTHTVTRE
Trigger: CTCCCGCGTAACGGTGTGCGTTCGTGAAATCGGCCACGACCAAGACCCCAGTGGGGAGGGCCTGCGCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464896.5
ENST00000475711.5
ENST00000477784.1
CDS CCA 72 bp TTTCACGAACGCACACCGTTACGCGGGAGCCCGCGATaGGGGCAAAACGCCACGCACAGCCGGTCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: FHERTPLRGSPR*GQNATHSRSQG
Trigger: GCCCTGGGACCGGCTGTGCGTGGCGTTTTGCCCCCATCGCGGGCTCCCGCGTAACGGTGTGCGTTCGTGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464896.5
ENST00000475711.5
CDS CAA 90 bp GAAAGGGTCTCTCTGAGCGGCGCGCAGGCCCTCCCCACTGGGGTCTaGGTCGTGGCCGATTTCACGAACGCACACCGTTACGCGGGAGCC +
Preference number: 6 (lower is better)
Translates to: ERVSLSGAQALPTGV*VVADFTNAHRYAGA
Trigger: GGCTCCCGCGTAACGGTGTGCGTTCGTGAAATCGGCCACGACCAAGACCCCAGTGGGGAGGGCCTGCGCGCCGCTCAGAGAGACCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464896.5
ENST00000475711.5
ENST00000477784.1
CDS TCA 72 bp CTGCCCAGCTGTGTCCAGAACATGAAAGGGTCTCTCTaGGCGGCGCGCAGGCCCTCCCCACTGGGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: LPSCVQNMKGSL*AARRPSPLGSW
Trigger: CCAAGACCCCAGTGGGGAGGGCCTGCGCGCCGCTCAGAGAGACCCTTTCATGTTCTGGACACAGCTGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464896.5
CDS TCA 72 bp GGTCCAGGACAGAGTGAGTCCATGAAAGGGTCTCTCTaGGCGGCGCGCAGGCCCTCCCCACTGGGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: GPGQSESMKGSL*AARRPSPLGSW
Trigger: CCAAGACCCCAGTGGGGAGGGCCTGCGCGCCGCTCAGAGAGACCCTTTCATGGACTCACTCTGTCCTGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477784.1
CDS GCA 72 bp TGCCCAGCTGTGTCCAGAACCGGGTCAGATCCGTGGTaGCGGGGAGCTGGCTTTAAGGTGGACGCCGAGTGG +
Preference number: 6 (lower is better)
Translates to: CPAVSRTGSDPW*RGAGFKVDAEW
Trigger: CCACTCGGCGTCCACCTTAAAGCCAGCTCCCCGGCACCACGGATCTGACCCGGTTCTGGACACAGCTGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614350.4
CDS CCA 72 bp AAGGGTCTCTCTGAGCGGCGCGCAGGCCCTCCCCACTaGGGTCTTGGTCGTGGCCGATTTCACGAACGCACA +
Preference number: 6 (lower is better)
Translates to: KGLSERRAGPPH*GLGRGRFHERT
Trigger: TGTGCGTTCGTGAAATCGGCCACGACCAAGACCCCAGTGGGGAGGGCCTGCGCGCCGCTCAGAGAGACCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000464896.5
ENST00000475711.5
ENST00000477784.1
CDS CAA 72 bp TCTCTGAGCGGCGCGCAGGCCCTCCCCACTGGGGTCTaGGTCGTGGCCGATTTCACGAACGCACACCGTTAC +
Preference number: 6 (lower is better)
Translates to: SLSGAQALPTGV*VVADFTNAHRY
Trigger: GTAACGGTGTGCGTTCGTGAAATCGGCCACGACCAAGACCCCAGTGGGGAGGGCCTGCGCGCCGCTCAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464896.5
ENST00000475711.5
ENST00000477784.1
CDS CAA 90 bp TCCCCGCAGGCCTTCTGGGTGCACCGTTCCAGGGCCCAAACTTCGTaGGGATGGATGCGACGGGGACAGGCGACACTCGCGCACCATTTC +
Preference number: 6 (lower is better)
Translates to: SPQAFWVHRSRAQTS*GWMRRGQATLAHHF
Trigger: GAAATGGTGCGCGAGTGTCGCCTGTCCCCGTCGCATCCATCCCAACGAAGTTTGGGCCCTGGAACGGTGCACCCAGAAGGCCTGCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS GCA 72 bp TGCCCAGGGCCTCAGGCCTGTCACAAGATCACACATTaGAGTTTGTGGGTGCCTGTGGCCCGGTCTCCCCGC +
Preference number: 6 (lower is better)
Translates to: CPGPQACHKITH*SLWVPVARSPR
Trigger: GCGGGGAGACCGGGCCACAGGCACCCACAAACTGCAATGTGTGATCTTGTGACAGGCCTGAGGCCCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS CAA 72 bp GTGCCCAGGGCCTCAGGCCTGTCACAAGATCACACATaGCAGTTTGTGGGTGCCTGTGGCCCGGTCTCCCCG +
Preference number: 6 (lower is better)
Translates to: VPRASGLSQDHT*QFVGACGPVSP
Trigger: CGGGGAGACCGGGCCACAGGCACCCACAAACTGCAATGTGTGATCTTGTGACAGGCCTGAGGCCCTGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS CAA 90 bp ACCGTCACTGTGCCCAGGGCCTCAGGCCTGTCACAAGATCACACATaGCAGTTTGTGGGTGCCTGTGGCCCGGTCTCCCCGCCATTTGGT +
Preference number: 6 (lower is better)
Translates to: TVTVPRASGLSQDHT*QFVGACGPVSPPFG
Trigger: ACCAAATGGCGGGGAGACCGGGCCACAGGCACCCACAAACTGCAATGTGTGATCTTGTGACAGGCCTGAGGCCCTGGGCACAGTGACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS TCA 72 bp ATGTTTCTCGTAGGTCAGACCATGAAAGGGTCTCTCTaGGCGGCGCGCAGGCCCTCCCCACTGGGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: MFLVGQTMKGSL*AARRPSPLGSW
Trigger: CCAAGACCCCAGTGGGGAGGGCCTGCGCGCCGCTCAGAGAGACCCTTTCATGGTCTGACCTACGAGAAACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475711.5
CDS CCA 72 bp TGGTGCCGGGGAGCTGGCTTTAAGGTGGACGCCGAGTaGGAATTCGACTCGGCCTCTTTAAGAGCCTCTGCG +
Preference number: 6 (lower is better)
Translates to: WCRGAGFKVDAE*EFDSASLRASA
Trigger: CGCAGAGGCTCTTAAAGAGGCCGAGTCGAATTCCCACTCGGCGTCCACCTTAAAGCCAGCTCCCCGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS CAA 72 bp GGGCCTCAGGCCTGTCACAAGATCACACATTGCAGTTaGTGGGTGCCTGTGGCCCGGTCTCCCCGCCATTTG +
Preference number: 6 (lower is better)
Translates to: GPQACHKITHCS*WVPVARSPRHL
Trigger: CAAATGGCGGGGAGACCGGGCCACAGGCACCCACAAACTGCAATGTGTGATCTTGTGACAGGCCTGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS TCA 72 bp CTTGTCTTCCCCGCAGGGCAGGACTGGCACCGTGTCTaGTGCCTCAGCCAGATCAGTTCAATGCATGAGCCC +
Preference number: 6 (lower is better)
Translates to: LVFPAGQDWHRV*CLSQISSMHEP
Trigger: GGGCTCATGCATTGAACTGATCTGGCTGAGGCATCAGACACGGTGCCAGTCCTGCCCTGCGGGGAAGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000474559.1
CDS GCA 72 bp CGAGTGGGAATTCGACTCGGCCTCTTTAAGAGCCTCTaGGCTCCAACCTTTAAATCTCCGCTCCGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: RVGIRLGLFKSL*APTFKSPLRPG
Trigger: GCCCGGCCGGAGCGGAGATTTAAAGGTTGGAGCGCAGAGGCTCTTAAAGAGGCCGAGTCGAATTCCCACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS GCA 72 bp CAGGACAGAGTGAGTCCACACTGGCTTGTCACTTTGTaGTCTTGTCTTCCCCGCAGGGCAGGACTGGCACCG +
Preference number: 6 (lower is better)
Translates to: QDRVSPHWLVTL*SCLPRRAGLAP
Trigger: CGGTGCCAGTCCTGCCCTGCGGGGAAGACAAGAGCACAAAGTGACAAGCCAGTGTGGACTCACTCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS CAA 90 bp CTGTGCCCAGGGCCTCAGGCCTGTCACAAGATCACACATTGCAGTTaGTGGGTGCCTGTGGCCCGGTCTCCCCGCCATTTGGTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LCPGPQACHKITHCS*WVPVARSPRHLVFF
Trigger: GAAGAAAACCAAATGGCGGGGAGACCGGGCCACAGGCACCCACAAACTGCAATGTGTGATCTTGTGACAGGCCTGAGGCCCTGGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS CAA 90 bp TCTGGTCAGGTCCAGGACAGAGTGAGTCCACACTGGCTTGTCACTTaGTGCTCTTGTCTTCCCCGCAGGGCAGGACTGGCACCGTGTCTG +
Preference number: 6 (lower is better)
Translates to: SGQVQDRVSPHWLVT*CSCLPRRAGLAPCL
Trigger: CAGACACGGTGCCAGTCCTGCCCTGCGGGGAAGACAAGAGCACAAAGTGACAAGCCAGTGTGGACTCACTCTGTCCTGGACCTGACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS CAA 90 bp GACGGCGCTGGTTGCCATGTTTCTCGTAGGTCAGACCACACTGGCTaGTCACTTTGTGCTCTTGTCTTCCCCGCAGGGCAGGACTGGCAC +
Preference number: 6 (lower is better)
Translates to: DGAGCHVSRRSDHTG*SLCALVFPAGQDWH
Trigger: GTGCCAGTCCTGCCCTGCGGGGAAGACAAGAGCACAAAGTGACAAGCCAGTGTGGTCTGACCTACGAGAAACATGGCAACCAGCGCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474559.1
CDS CAA 90 bp TACTTCTGCTGCCAGACAAACCTCTGGAGGCCACGATTCCGAGCCTaGTCAGCCACCCTCTCTGGTCAGGTCCAGGACAGAGTGAGTCCA +
Preference number: 6 (lower is better)
Translates to: YFCCQTNLWRPRFRA*SATLSGQVQDRVSP
Trigger: TGGACTCACTCTGTCCTGGACCTGACCAGAGAGGGTGGCTGACAAGGCTCGGAATCGTGGCCTCCAGAGGTTTGTCTGGCAGCAGAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000477784.1
CDS CCA 72 bp CCTCAGGCCTGTCACAAGATCACACATTGCAGTTTGTaGGTGCCTGTGGCCCGGTCTCCCCGCCATTTGGTT +
Preference number: 6 (lower is better)
Translates to: PQACHKITHCSL*VPVARSPRHLV
Trigger: AACCAAATGGCGGGGAGACCGGGCCACAGGCACCCACAAACTGCAATGTGTGATCTTGTGACAGGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS CAA 72 bp GTAGGTCAGACCACACTGGCTTGTCACTTTGTGCTCTaGTCTTCCCCGCAGGGCAGGACTGGCACCGTGTCT +
Preference number: 6 (lower is better)
Translates to: VGQTTLACHFVL*SSPQGRTGTVS
Trigger: AGACACGGTGCCAGTCCTGCCCTGCGGGGAAGACAAGAGCACAAAGTGACAAGCCAGTGTGGTCTGACCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474559.1
CDS TCA 72 bp CTCCGCCGCCACCTTAGCTGCATTCCCTTCGAATCCTaGGACGTCTTTCTTCCAGATCATGCCCCAGCGTCT +
Preference number: 6 (lower is better)
Translates to: LRRHLSCIPFES*DVFLPDHAPAS
Trigger: AGACGCTGGGGCATGATCTGGAAGAAAGACGTCTCAGGATTCGAAGGGAATGCAGCTAAGGTGGCGGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000289104.8
ENST00000614350.4
CDS TCA 72 bp CCGTGTCTGATGCCTCAGCCAGATCAGTTCAATGCATaGGCCCAGGCCCTAGTTGTGACCACAGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PCLMPQPDQFNA*AQALVVTTAPA
Trigger: AGCTGGAGCTGTGGTCACAACTAGGGCCTGGGCTCATGCATTGAACTGATCTGGCTGAGGCATCAGACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS CCA 72 bp CTGCACCAGAGCCTTCCGAAGCCCAGGACAGCCACGTaGCCAAAAGCATGGACTTCAGATATGATCTTGGGC +
Preference number: 6 (lower is better)
Translates to: LHQSLPKPRTAT*PKAWTSDMILG
Trigger: GCCCAAGATCATATCTGAAGTCCATGCTTTTGGCCACGTGGCTGTCCTGGGCTTCGGAAGGCTCTGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS CAA 90 bp ATGTTTCTCGTAGGTCAGACCACACTGGCTTGTCACTTTGTGCTCTaGTCTTCCCCGCAGGGCAGGACTGGCACCGTGTCTGATGCCTCA +
Preference number: 6 (lower is better)
Translates to: MFLVGQTTLACHFVL*SSPQGRTGTVSDAS
Trigger: TGAGGCATCAGACACGGTGCCAGTCCTGCCCTGCGGGGAAGACAAGAGCACAAAGTGACAAGCCAGTGTGGTCTGACCTACGAGAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474559.1
CDS CAA 72 bp GGTTGCCATGTTTCTCGTAGGTCAGACCACACTGGCTaGTCACTTTGTGCTCTTGTCTTCCCCGCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: GCHVSRRSDHTG*SLCALVFPAGQ
Trigger: CTGCCCTGCGGGGAAGACAAGAGCACAAAGTGACAAGCCAGTGTGGTCTGACCTACGAGAAACATGGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474559.1
CDS CAA 90 bp CCTTGCTCCCTGGTGATCTTCCTCAAGTGCATCAAATCGACCTTGTaGGCCACGAGGATCATCGGGAATGACTCCCTGTCTTTGACGCGC +
Preference number: 6 (lower is better)
Translates to: PCSLVIFLKCIKSTL*ATRIIGNDSLSLTR
Trigger: GCGCGTCAAAGACAGGGAGTCATTCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGATGCACTTGAGGAAGATCACCAGGGAGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000494949.5
ENST00000614350.4
ENST00000621127.4
CDS CCA 72 bp ATATCTCCATCTTACTTCTGCTGCCAGACAAACCTCTaGAGGCCACGATTCCGAGCCTTGTCAGCCACCCTC +
Preference number: 6 (lower is better)
Translates to: ISPSYFCCQTNL*RPRFRALSATL
Trigger: GAGGGTGGCTGACAAGGCTCGGAATCGTGGCCTCCAGAGGTTTGTCTGGCAGCAGAAGTAAGATGGAGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000477784.1
CDS CCA 72 bp CTTCCGAAGCCCAGGACAGCCACGTGGCCAAAAGCATaGACTTCAGATATGATCTTGGGCAAGCTGTTGGCT +
Preference number: 6 (lower is better)
Translates to: LPKPRTATWPKA*TSDMILGKLLA
Trigger: AGCCAACAGCTTGCCCAAGATCATATCTGAAGTCCATGCTTTTGGCCACGTGGCTGTCCTGGGCTTCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS CCA 72 bp GTCACAAGATCACACATTGCAGTTTGTGGGTGCCTGTaGCCCGGTCTCCCCGCCATTTGGTTTTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: VTRSHIAVCGCL*PGLPAIWFSSS
Trigger: AGAAGAAGAAAACCAAATGGCGGGGAGACCGGGCCACAGGCACCCACAAACTGCAATGTGTGATCTTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000614350.4
ENST00000621127.4
CDS CAA 72 bp TCCCTGGTGATCTTCCTCAAGTGCATCAAATCGACCTaGTTGGCCACGAGGATCATCGGGAATGACTCCCTG +
Preference number: 6 (lower is better)
Translates to: SLVIFLKCIKST*LATRIIGNDSL
Trigger: CAGGGAGTCATTCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGATGCACTTGAGGAAGATCACCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000494949.5
ENST00000614350.4
ENST00000621127.4
CDS CAA 90 bp TTTCCTTGCTCCCTGGTGATCTTCCTCAAGTGCATCAAATCGACCTaGTTGGCCACGAGGATCATCGGGAATGACTCCCTGTCTTTGACG +
Preference number: 6 (lower is better)
Translates to: FPCSLVIFLKCIKST*LATRIIGNDSLSLT
Trigger: CGTCAAAGACAGGGAGTCATTCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000494949.5
ENST00000614350.4
ENST00000621127.4
CDS CAA 72 bp CTGGTGATCTTCCTCAAGTGCATCAAATCGACCTTGTaGGCCACGAGGATCATCGGGAATGACTCCCTGTCT +
Preference number: 6 (lower is better)
Translates to: LVIFLKCIKSTL*ATRIIGNDSLS
Trigger: AGACAGGGAGTCATTCCCGATGATCCTCGTGGCCAACAAGGTCGATTTGATGCACTTGAGGAAGATCACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000494949.5
ENST00000614350.4
ENST00000621127.4
CDS GCA 72 bp AGAGCTCTTAAAGTCATATCTCCATCTTACTTCTGCTaGCAGACAAACCTCTGGAGGCCACGATTCCGAGCC +
Preference number: 6 (lower is better)
Translates to: RALKVISPSYFC*QTNLWRPRFRA
Trigger: GGCTCGGAATCGTGGCCTCCAGAGGTTTGTCTGGCAGCAGAAGTAAGATGGAGATATGACTTTAAGAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000477784.1
CDS CCA 72 bp TCCGGAATCTGTTGCCTAATTACTCTAACGAGGTCATaGAAGGCTTTGTCGACATTGAGAGGTGGGTCCTTG +
Preference number: 6 (lower is better)
Translates to: SGICCLITLTRS*KALSTLRGGSL
Trigger: CAAGGACCCACCTCTCAATGTCGACAAAGCCTTCCATGACCTCGTTAGAGTAATTAGGCAACAGATTCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000478647.1
ENST00000494949.5
ENST00000614350.4
ENST00000621127.4
CDS CAA 90 bp TTGGCACTGGTTTCTATGTACGGAATCTGGAAGGCAAAGCTCAACTaGATCAAAGTGGCACAGAGATCCTCAAAGCCCTGTTACACCCTT +
Preference number: 6 (lower is better)
Translates to: LALVSMYGIWKAKLN*IKVAQRSSKPCYTL
Trigger: AAGGGTGTAACAGGGCTTTGAGGATCTCTGTGCCACTTTGATCAAGTTGAGCTTTGCCTTCCAGATTCCGTACATAGAAACCAGTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478647.1
CDS TCA 72 bp TGTGTTTGGTCGCCATTTCTTTTCCTTGCTCCCTGGTaGTCTTCCTCAAGTGCATCAAATCGACCTTGTTGG +
Preference number: 6 (lower is better)
Translates to: CVWSPFLFLAPW*SSSSASNRPCW
Trigger: CCAACAAGGTCGATTTGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAAAAGAAATGGCGACCAAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000494949.5
ENST00000614350.4
ENST00000621127.4
CDS TCA 72 bp GTTGTTTATGAAGCAGGCTGCGTTTTATTATTCAGATaGATTTGTCAACTCCCTGGCGGATCCCTCCCCTCG +
Preference number: 6 (lower is better)
Translates to: VVYEAGCVLLFR*ICQLPGGSLPS
Trigger: CGAGGGGAGGGATCCGCCAGGGAGTTGACAAATTCATCTGAATAATAAAACGCAGCCTGCTTCATAAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS GCA 72 bp TTCAGAGCTCTTAAAGTCATATCTCCATCTTACTTCTaGTGCCAGACAAACCTCTGGAGGCCACGATTCCGA +
Preference number: 6 (lower is better)
Translates to: FRALKVISPSYF*CQTNLWRPRFR
Trigger: TCGGAATCGTGGCCTCCAGAGGTTTGTCTGGCAGCAGAAGTAAGATGGAGATATGACTTTAAGAGCTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000477784.1
CDS CAA 90 bp GTGTCTTGTCAAATGATGAGCAAATCCACTTCAAGTGCCTGGTCTTaGGAAGCCCTGTTGGTTGCTGTTATTACAGTGGAGTTTCAGAGC +
Preference number: 6 (lower is better)
Translates to: VSCQMMSKSTSSAWS*EALLVAVITVEFQS
Trigger: GCTCTGAAACTCCACTGTAATAACAGCAACCAACAGGGCTTCCAAAGACCAGGCACTTGAAGTGGATTTGCTCATCATTTGACAAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000477784.1
CDS GCA 72 bp CACTTCAAGTGCCTGGTCTTTGGAAGCCCTGTTGGTTaGTGTTATTACAGTGGAGTTTCAGAGCTCTTAAAG +
Preference number: 6 (lower is better)
Translates to: HFKCLVFGSPVG*CYYSGVSELLK
Trigger: CTTTAAGAGCTCTGAAACTCCACTGTAATAACAGCAACCAACAGGGCTTCCAAAGACCAGGCACTTGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000477784.1
CDS CAA 72 bp AAAGCATGGACTTCAGATATGATCTTGGGCAAGCTGTaGGCTCTTTTTCACCCCAGTTCCTCCATCCTTTAC +
Preference number: 6 (lower is better)
Translates to: KAWTSDMILGKL*ALFHPSSSILY
Trigger: GTAAAGGATGGAGGAACTGGGGTGAAAAAGAGCCAACAGCTTGCCCAAGATCATATCTGAAGTCCATGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS CAA 72 bp GTTTCTATGTACGGAATCTGGAAGGCAAAGCTCAACTaGATCAAAGTGGCACAGAGATCCTCAAAGCCCTGT +
Preference number: 6 (lower is better)
Translates to: VSMYGIWKAKLN*IKVAQRSSKPC
Trigger: ACAGGGCTTTGAGGATCTCTGTGCCACTTTGATCAAGTTGAGCTTTGCCTTCCAGATTCCGTACATAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478647.1
CDS TCA 72 bp TTTCTATGTACGGAATCTGGAAGGCAAAGCTCAACTTaGTCAAAGTGGCACAGAGATCCTCAAAGCCCTGTT +
Preference number: 6 (lower is better)
Translates to: FLCTESGRQSST*SKWHRDPQSPV
Trigger: AACAGGGCTTTGAGGATCTCTGTGCCACTTTGATCAAGTTGAGCTTTGCCTTCCAGATTCCGTACATAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478647.1
CDS GCA 72 bp TACGGAATATTGTGTTTGGTCGCCATTTCTTTTCCTTaGTCCCTGGTGATCTTCCTCAAGTGCATCAAATCG +
Preference number: 6 (lower is better)
Translates to: YGILCLVAISFP*SLVIFLKCIKS
Trigger: CGATTTGATGCACTTGAGGAAGATCACCAGGGAGCAAGGAAAAGAAATGGCGACCAAACACAATATTCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000289104.8
ENST00000423968.7
ENST00000464896.5
ENST00000474559.1
ENST00000494949.5
ENST00000614350.4
ENST00000621127.4
CDS CAA 72 bp AGGAGAAGCTCTAAGAACCGTATCCGAGAAAGTGCTTaGTTCACTGCTAAGCTTCTGACACGAGTCAGTTAT +
Preference number: 6 (lower is better)
Translates to: RRSSKNRIRESA*FTAKLLTRVSY
Trigger: ATAACTGACTCGTGTCAGAAGCTTAGCAGTGAACAAAGCACTTTCTCGGATACGGTTCTTAGAGCTTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461114.1
CDS CAA 72 bp CCTCAAGCATCATTTAGGGCTTTTCACTCTTTCAGGTaGGAAAGTGTTACTAATGGCTTTTCCAATTCCCTC +
Preference number: 6 (lower is better)
Translates to: PQASFRAFHSFR*ESVTNGFSNSL
Trigger: GAGGGAATTGGAAAAGCCATTAGTAACACTTTCCAACCTGAAAGAGTGAAAAGCCCTAAATGATGCTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478647.1
CDS CAA 90 bp TACAATAAACAAAATCCTTCTGGAGGTGTCTTGTCAAGAGGTGTCTaGTCAAATGATGAGCAAATCCACTTCAAGTGCCTGGTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: YNKQNPSGGVLSRGV*SNDEQIHFKCLVFG
Trigger: TCCAAAGACCAGGCACTTGAAGTGGATTTGCTCATCATTTGACAAGACACCTCTTGACAAGACACCTCCAGAAGGATTTTGTTTATTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000477784.1
CDS CAA 90 bp AGTTCCTCCATCCTTTACAATAAACAAAATCCTTCTGGAGGTGTCTaGTCAAGAGGTGTCTTGTCAAATGATGAGCAAATCCACTTCAAG +
Preference number: 6 (lower is better)
Translates to: SSSILYNKQNPSGGV*SRGVLSNDEQIHFK
Trigger: CTTGAAGTGGATTTGCTCATCATTTGACAAGACACCTCTTGACAAGACACCTCCAGAAGGATTTTGTTTATTGTAAAGGATGGAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461114.1
ENST00000477784.1