RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MRAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000135324

Ensembl transcript IDs: ENST00000257776.5

Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTATTCTGAGGCAGGGGATGGCTGTCTCCAGGTTAGAGCATGGGTaGTTGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCCACCAGA +
Preference number: 1 (lower is better)
Translates to: LILRQGMAVSRLEHG*LEVLRRAVSAQPTR
Trigger: TCTGGTGGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAACCTGGAGACAGCCATCCCCTGCCTCAGAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CCA 90 bp GGTACTTATTCTGAGGCAGGGGATGGCTGTCTCCAGGTTAGAGCATaGGTGGTTGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCCAC +
Preference number: 1 (lower is better)
Translates to: GTYSEAGDGCLQVRA*VVGSSQKSCFSTTH
Trigger: GTGGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAACCTGGAGACAGCCATCCCCTGCCTCAGAATAAGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR GCA 90 bp ACTCAGCTTAATCAGCTCAGCTCTCTTCTAAAGGGGTCTCTTCTCTaGCTCTCTGTCTCTATCTCTATGTCTCTCTCTCCCCCAAACACA +
Preference number: 1 (lower is better)
Translates to: TQLNQLSSLLKGSLL*LSVSISMSLSPPNT
Trigger: TGTGTTTGGGGGAGAGAGAGACATAGAGATAGAGACAGAGAGGCAGAGAAGAGACCCCTTTAGAAGAGAGCTGAGCTGATTAAGCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CCA 90 bp GAAGGCACCTCCTCTCATTCAGCTGACAAGCTTCCTAACATTTCTTaGGGACAAGAGTACCATACATGTACTACGAATTGGTACTTATTC +
Preference number: 1 (lower is better)
Translates to: EGTSSHSADKLPNIS*GQEYHTCTTNWYLF
Trigger: GAATAAGTACCAATTCGTAGTACATGTATGGTACTCTTGTCCCCAAGAAATGTTAGGAAGCTTGTCAGCTGAATGAGAGGAGGTGCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CCA 90 bp AAGGTAATAGCATGGCAAATAGTATTTTTCTTGTTCTGTAGCCAATaGCACAGATACACCAACACAGAGATACCCAGAAGGCACCTCCTC +
Preference number: 1 (lower is better)
Translates to: KVIAWQIVFFLFCSQ*HRYTNTEIPRRHLL
Trigger: GAGGAGGTGCCTTCTGGGTATCTCTGTGTTGGTGTATCTGTGCCATTGGCTACAGAACAAGAAAAATACTATTTGCCATGCTATTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR GCA 90 bp TTTAAAATTTGTATTGGGCCACATTCAAAGCTGTCCTGGGACACATaGCACGGGTTGGACAAGCTTGGTGTAAATACTTTAATACTCCCA +
Preference number: 1 (lower is better)
Translates to: FKICIGPHSKLSWDT*HGLDKLGVNTLILP
Trigger: TGGGAGTATTAAAGTATTTACACCAAGCTTGTCCAACCCGTGGCATGTGTCCCAGGACAGCTTTGAATGTGGCCCAATACAAATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CAA 90 bp ATTCTGAGGCAGGGGATGGCTGTCTCCAGGTTAGAGCATGGGTGGTaGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCCACCAGAAAC +
Preference number: 2 (lower is better)
Translates to: ILRQGMAVSRLEHGW*EVLRRAVSAQPTRN
Trigger: GTTTCTGGTGGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAACCTGGAGACAGCCATCCCCTGCCTCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CCA 90 bp CAGTTAAAAATGGGGCAGCCCAGAGAGGTAAAGCAACTCACCAAAGGTAGAGCACATTCAAAGCTGTCCTaGGACACATGCCACGGGTTG +
Preference number: 2 (lower is better)
Translates to: QLKMGQPREVKQLTKGRAHSKLS*DTCHGL
Trigger: CAACCCGTGGCATGTGTCCCAGGACAGCTTTGAATG...TGCTCTACCTTTGGTGAGTTGCTTTACCTCTCTGGGCTGCCCCATTTTTAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR TCA 90 bp GTTAGAGCATGGGTGGTTGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCCACGACAACCAGATCCCCTaGCTAAAGCTTGGCTCAATT +
Preference number: 2 (lower is better)
Translates to: VRAWVVGSSQKSCFSTTHDNQIP*LKLGSI
Trigger: AATTGAGCCAAGCTTTAGTCAGGGGATCTGGTTGTC...GTGGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR GCA 90 bp CAGTTAAAAATGGGGCAGCCCAGAGAGGTAAAGCAACTCACCAAAGGTAGAGCACTTTTAGCTTCCCTGTaGCACACTGGAAGAAGAGTT +
Preference number: 2 (lower is better)
Translates to: QLKMGQPREVKQLTKGRALLASL*HTGRRV
Trigger: AACTCTTCTTCCAGTGTGGCACAGGGAAGCTAAAAG...TGCTCTACCTTTGGTGAGTTGCTTTACCTCTCTGGGCTGCCCCATTTTTAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CCA 90 bp AATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTACACCTCCAGGTTAGAGCATaGGTGGTTGGAAGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: NLQPTDHLSSKPDDYHLHLQVRA*VVGSSQ
Trigger: CTGAGAACTTCCAACCACCCATGCTCTAACCTGGAG...GTGTAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CAA 90 bp ACCTACACATCTGCCAAGGTAATAGCATGGCAAATAGTATTTTTCTaGTTCTGTAGCCAATGGCACAGATACACCAACACAGAGATACCC +
Preference number: 2 (lower is better)
Translates to: TYTSAKVIAWQIVFF*FCSQWHRYTNTEIP
Trigger: GGGTATCTCTGTGTTGGTGTATCTGTGCCATTGGCTACAGAACAAGAAAAATACTATTTGCCATGCTATTACCTTGGCAGATGTGTAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CCA 90 bp CAAAGCCAGATGACTATCACCTACACATCTGCCAAGGTAATAGCATGGCAAATAATATTAGAGGTGGGATaGATCACTCTAGACCTGTCA +
Preference number: 2 (lower is better)
Translates to: QSQMTITYTSAKVIAWQIILEVG*ITLDLS
Trigger: TGACAGGTCTAGAGTGATCCATCCCACCTCTAATAT...TATTTGCCATGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CCA 90 bp GGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTATCAATTAGGGTTAAGTaGAAGGTACAGAGATTTGAG +
Preference number: 2 (lower is better)
Translates to: GNLQPTDHLSSKPDDYHLSIRVK*KVQRFE
Trigger: CTCAAATCTCTGTACCTTCCACTTAACCCTAATTGA...TAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CCA 90 bp AATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTACACCTTCCTAACATTTCTTaGGGACAAGAGTACCATACA +
Preference number: 2 (lower is better)
Translates to: NLQPTDHLSSKPDDYHLHLPNIS*GQEYHT
Trigger: TGTATGGTACTCTTGTCCCCAAGAAATGTTAGGAAG...GTGTAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CCA 90 bp CAAAGCCAGATGACTATCACCTACACATCTGCCAAGGTAATAGCATGGCAAATATTGTTCTGTAGCCAATaGCACAGATACACCAACACA +
Preference number: 2 (lower is better)
Translates to: QSQMTITYTSAKVIAWQILFCSQ*HRYTNT
Trigger: TGTGTTGGTGTATCTGTGCCATTGGCTACAGAACAA...TATTTGCCATGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CCA 90 bp CAAAGCCAGATGACTATCACCTACACATCTGCCAAGGTAATAGCATGGCAAATACGGGTTGGACAAGCTTaGTGTAAATACTTTAATACT +
Preference number: 2 (lower is better)
Translates to: QSQMTITYTSAKVIAWQIRVGQA*CKYFNT
Trigger: AGTATTAAAGTATTTACACCAAGCTTGTCCAACCCG...TATTTGCCATGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CCA 72 bp AGGCAGGGGATGGCTGTCTCCAGGTTAGAGCATGGGTaGTTGGAAGTTCTCAGAAGAGCTGTTTCAGCACAA +
Preference number: 3 (lower is better)
Translates to: RQGMAVSRLEHG*LEVLRRAVSAQ
Trigger: TTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAACCTGGAGACAGCCATCCCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR GCA 72 bp AATCAGCTCAGCTCTCTTCTAAAGGGGTCTCTTCTCTaGCTCTCTGTCTCTATCTCTATGTCTCTCTCTCCC +
Preference number: 3 (lower is better)
Translates to: NQLSSLLKGSLL*LSVSISMSLSP
Trigger: GGGAGAGAGAGACATAGAGATAGAGACAGAGAGGCAGAGAAGAGACCCCTTTAGAAGAGAGCTGAGCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR GCA 72 bp TGTATTGGGCCACATTCAAAGCTGTCCTGGGACACATaGCACGGGTTGGACAAGCTTGGTGTAAATACTTTA +
Preference number: 3 (lower is better)
Translates to: CIGPHSKLSWDT*HGLDKLGVNTL
Trigger: TAAAGTATTTACACCAAGCTTGTCCAACCCGTGGCATGTGTCCCAGGACAGCTTTGAATGTGGCCCAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CCA 72 bp AGAGGTGTCCAATCTTTTAGCTTCCCTGTGCCACACTaGAAGAAGAGTTGTCTTGGGCCACACATAAAGTAC +
Preference number: 3 (lower is better)
Translates to: RGVQSFSFPVPH*KKSCLGPHIKY
Trigger: GTACTTTATGTGTGGCCCAAGACAACTCTTCTTCCAGTGTGGCACAGGGAAGCTAAAAGATTGGACACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR GCA 72 bp TATAAATCAGAGGTGTCCAATCTTTTAGCTTCCCTGTaGCACACTGGAAGAAGAGTTGTCTTGGGCCACACA +
Preference number: 3 (lower is better)
Translates to: YKSEVSNLLASL*HTGRRVVLGHT
Trigger: TGTGTGGCCCAAGACAACTCTTCTTCCAGTGTGGCACAGGGAAGCTAAAAGATTGGACACCTCTGATTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CAA 90 bp ACCACTCAGCTTAATCAGCTCAGCTCTCTTCTAAAGGGGTCTCTTCTCTGCCTCCAAACACACACAATTTaGGTGGATGTAGATTTCTTG +
Preference number: 3 (lower is better)
Translates to: TTQLNQLSSLLKGSLLCLQTHTI*VDVDFL
Trigger: CAAGAAATCTACATCCACCAAAATTGTGTGTGTTTG...GAGGCAGAGAAGAGACCCCTTTAGAAGAGAGCTGAGCTGATTAAGCTGAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CAA 90 bp ATCTCAGCTCAAAGCCAGATGACTATCACCTACACATCTGCCAAGGTAATAGCAACACTGGAAGAAGAGTaGTCTTGGGCCACACATAAA +
Preference number: 3 (lower is better)
Translates to: ISAQSQMTITYTSAKVIATLEEE*SWATHK
Trigger: TTTATGTGTGGCCCAAGACAACTCTTCTTCCAGTGT...TGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTGAGCTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CCA 72 bp TCCTCTCATTCAGCTGACAAGCTTCCTAACATTTCTTaGGGACAAGAGTACCATACATGTACTACGAATTGG +
Preference number: 3 (lower is better)
Translates to: SSHSADKLPNIS*GQEYHTCTTNW
Trigger: CCAATTCGTAGTACATGTATGGTACTCTTGTCCCCAAGAAATGTTAGGAAGCTTGTCAGCTGAATGAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CCA 72 bp GCATGGCAAATAGTATTTTTCTTGTTCTGTAGCCAATaGCACAGATACACCAACACAGAGATACCCAGAAGG +
Preference number: 3 (lower is better)
Translates to: AWQIVFFLFCSQ*HRYTNTEIPRR
Trigger: CCTTCTGGGTATCTCTGTGTTGGTGTATCTGTGCCATTGGCTACAGAACAAGAAAAATACTATTTGCCATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CAA 90 bp GGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTAGCTGACAATAGGTATTaGGCCAAATTTTTCAACAAG +
Preference number: 3 (lower is better)
Translates to: GNLQPTDHLSSKPDDYHLADNRY*AKFFNK
Trigger: CTTGTTGAAAAATTTGGCCAAATACCTATTGTCAGC...TAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR-3UTR CAA 90 bp ATCTCAGCTCAAAGCCAGATGACTATCACCTACACATCTGCCAAGGTAATAGCACAAATAGTATTTTTCTaGTTCTGTAGCCAATGGCAC +
Preference number: 3 (lower is better)
Translates to: ISAQSQMTITYTSAKVIAQIVFF*FCSQWH
Trigger: GTGCCATTGGCTACAGAACAAGAAAAATACTATTTG...TGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTGAGCTGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR GCA 72 bp CTCAGCTCAAAGCCAGATGACTATCACCTACACATCTaGCAAGGTAATAGCATGGCAAATAGTATTTTTCTT +
Preference number: 3 (lower is better)
Translates to: LSSKPDDYHLHI*QGNSMANSIFL
Trigger: AAGAAAAATACTATTTGCCATGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTGAGCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp TGGGCCACATTCAAAGCTGTCCTGGGACACATGCCACGGGTTGGACAAGCTTGGAGGGCTGTGGTCTGGTaGCAAGCTTTGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: WATFKAVLGHMPRVGQAWRAVVW*QALALS
Trigger: GGACAGAGCCAAAGCTTGTCACCAGACCACAGCCCT...CCAAGCTTGTCCAACCCGTGGCATGTGTCCCAGGACAGCTTTGAATGTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp CCAGAGGTTAACAGCTTGCCATGCATGCAACTGTGTGCGCAAAATCAAGTTGTTACATCTCCGACCGGCTaGCTAGCCCCGGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: PEVNSLPCMQLCAQNQVVTSPTG*LAPARG
Trigger: CCCGCGGGCCGGGGCTAGCCAGCCGGTCGGAGATGT...AACAACTTGATTTTGCGCACACAGTTGCATGCATGGCAAGCTGTTAACCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp TGGGCCACATTCAAAGCTGTCCTGGGACACATGCCACGGGTTGGACAAGCTTGGCATTCAAAGCTGTCCTaGGACACATGCCACGGGTTG +
Preference number: 4 (lower is better)
Translates to: WATFKAVLGHMPRVGQAWHSKLS*DTCHGL
Trigger: CAACCCGTGGCATGTGTCCCAGGACAGCTTTGAATG...CCAAGCTTGTCCAACCCGTGGCATGTGTCCCAGGACAGCTTTGAATGTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp ATCTCAGCTCAAAGCCAGATGACTATCACCTACACATCTGCCAAGGTAATAGCACCTGGTTCCGGCTCCTaGCTCCTCCGAGGTGCGCGA +
Preference number: 4 (lower is better)
Translates to: ISAQSQMTITYTSAKVIAPGSGS*LLRGAR
Trigger: TCGCGCACCTCGGAGGAGCCAGGAGCCGGAACCAGG...TGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTGAGCTGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CAA 72 bp CAGGGGATGGCTGTCTCCAGGTTAGAGCATGGGTGGTaGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCC +
Preference number: 4 (lower is better)
Translates to: QGMAVSRLEHGW*EVLRRAVSAQP
Trigger: GGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAACCTGGAGACAGCCATCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp TGGGCCACATTCAAAGCTGTCCTGGGACACATGCCACGGGTTGGACAAGCTTGGCAGCTCAAAGCCAGATaGCTATCACCTACACATCTG +
Preference number: 4 (lower is better)
Translates to: WATFKAVLGHMPRVGQAWQLKAR*LSPTHL
Trigger: CAGATGTGTAGGTGATAGTCATCTGGCTTTGAGCTG...CCAAGCTTGTCCAACCCGTGGCATGTGTCCCAGGACAGCTTTGAATGTGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp TTCCTAACATTTCTTGGGGACAAGAGTACCATACATGTACTACGAATTGGTACTCCGCGGGCTCGGCCCTaGTTCCGGCTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FLTFLGDKSTIHVLRIGTPRARP*FRLLAP
Trigger: AGGAGCCAGGAGCCGGAACCAGGGCCGAGCCCGCGG...AGTACCAATTCGTAGTACATGTATGGTACTCTTGTCCCCAAGAAATGTTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp TGGGCCACATTCAAAGCTGTCCTGGGACACATGCCACGGGTTGGACAAGCTTGGAAACATTGGCCACCATaGCTGTGTAAGATGAGTCTC +
Preference number: 4 (lower is better)
Translates to: WATFKAVLGHMPRVGQAWKHWPP*LCKMSL
Trigger: GAGACTCATCTTACACAGTCATGGTGGCCAATGTTT...CCAAGCTTGTCCAACCCGTGGCATGTGTCCCAGGACAGCTTTGAATGTGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp ACCACTCAGCTTAATCAGCTCAGCTCTCTTCTAAAGGGGTCTCTTCTCTGCCTCTGCATTGTCTTGGTGTaGGGCTCCTGTCTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: TTQLNQLSSLLKGSLLCLCIVLV*GSCLGQ
Trigger: CTGACCAAGACAGGAGCCCCACACCAAGACAATGCA...GAGGCAGAGAAGAGACCCCTTTAGAAGAGAGCTGAGCTGATTAAGCTGAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp TGGGCCACATTCAAAGCTGTCCTGGGACACATGCCACGGGTTGGACAAGCTTGGTTAGATGCCGATTGCTaGGAGGTTCTGTTAGAAATT +
Preference number: 4 (lower is better)
Translates to: WATFKAVLGHMPRVGQAWLDADC*EVLLEI
Trigger: AATTTCTAACAGAACCTCCCAGCAATCGGCATCTAA...CCAAGCTTGTCCAACCCGTGGCATGTGTCCCAGGACAGCTTTGAATGTGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp GTGGGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACATGGCTTCCTGGAGTTaGACGTCACTGTCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: VGNLQPTDHLSSKPDDYHMASWS*TSLSRA
Trigger: AGCCCTTGACAGTGACGTCCAACTCCAGGAAGCCAT...GTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR GCA 90 bp ACCACTCAGCTTAATCAGCTCAGCTCTCTTCTAAAGGGGTCTCTTCTCTGCCTCACAGCTTGCCATGCATaGAACTGTGTGCGCAAAATC +
Preference number: 4 (lower is better)
Translates to: TTQLNQLSSLLKGSLLCLTACHA*NCVRKI
Trigger: GATTTTGCGCACACAGTTGCATGCATGGCAAGCTGT...GAGGCAGAGAAGAGACCCCTTTAGAAGAGAGCTGAGCTGATTAAGCTGAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR GCA 90 bp GTTAGAGCATGGGTGGTTGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCCACGTTAACAGCTTGCCATaGATGCAACTGTGTGCGCAA +
Preference number: 4 (lower is better)
Translates to: VRAWVVGSSQKSCFSTTHVNSLP*MQLCAQ
Trigger: TTGCGCACACAGTTGCATGCATGGCAAGCTGTTAAC...GTGGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp AGAGGTGTCCAATCTTTTAGCTTCCCTGTGCCACACTGGAAGAAGAGTTGTCTTGACTCTGCATTGTCTTaGTGTGGGGCTCCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: RGVQSFSFPVPHWKKSCLDSALS*CGAPVL
Trigger: CAAGACAGGAGCCCCACACCAAGACAATGCAGAGTC...AAGACAACTCTTCTTCCAGTGTGGCACAGGGAAGCTAAAAGATTGGACACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp GGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTACACTGTCAAGGGCTGTaGTCTGGTGACAAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GNLQPTDHLSSKPDDYHLHCQGL*SGDKLW
Trigger: CCAAAGCTTGTCACCAGACCACAGCCCTTGACAGTG...TAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp GTGGGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACAATTGGTACTTATTCTaGGGCAGGGGATGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VGNLQPTDHLSSKPDDYHNWYLF*GRGWLS
Trigger: AGACAGCCATCCCCTGCCTCAGAATAAGTACCAATT...GTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp AGAGGTGTCCAATCTTTTAGCTTCCCTGTGCCACACTGGAAGAAGAGTTGTCTTTCTGGTGACAAGCTTTaGCTCTGTCCAAGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: RGVQSFSFPVPHWKKSCLSGDKL*LCPSVP
Trigger: TGGAACGCTTGGACAGAGCCAAAGCTTGTCACCAGA...AAGACAACTCTTCTTCCAGTGTGGCACAGGGAAGCTAAAAGATTGGACACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp GTTAGAGCATGGGTGGTTGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCCACAGGTTAGAGCATGGGTaGTTGGAAGTTCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: VRAWVVGSSQKSCFSTTHRLEHG*LEVLRR
Trigger: TCTTCTGAGAACTTCCAACCACCCATGCTCTAACCT...GTGGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp TTCCTAACATTTCTTGGGGACAAGAGTACCATACATGTACTACGAATTGGTACTGCTGCCCACTGCTTCTaGTGGCTTCCTGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: FLTFLGDKSTIHVLRIGTAAHCF*WLPGVG
Trigger: TCCAACTCCAGGAAGCCATCAGAAGCAGTGGGCAGC...AGTACCAATTCGTAGTACATGTATGGTACTCTTGTCCCCAAGAAATGTTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp AATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTACACGGATGTCAAACTTCATaGGCCTGTTCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: NLQPTDHLSSKPDDYHLHGCQTS*ACSAPP
Trigger: AGGAGGAGCTGAACAGGCTCATGAAGTTTGACATCC...GTGTAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp GGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTAGAATTTACAACCCACTaGCCATCTCAGCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GNLQPTDHLSSKPDDYHLEFTTH*PSQLKA
Trigger: GGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTC...TAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR GCA 90 bp ACCACTCAGCTTAATCAGCTCAGCTCTCTTCTAAAGGGGTCTCTTCTCTGCCTCGAATTAGATGCCGATTaGTGGGAGGTTCTGTTAGAA +
Preference number: 4 (lower is better)
Translates to: TTQLNQLSSLLKGSLLCLELDAD*WEVLLE
Trigger: TTCTAACAGAACCTCCCAGCAATCGGCATCTAATTC...GAGGCAGAGAAGAGACCCCTTTAGAAGAGAGCTGAGCTGATTAAGCTGAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR GCA 90 bp GTTAGAGCATGGGTGGTTGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCCACGTAATCAGAATTAGATaGCGATTGCTGGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VRAWVVGSSQKSCFSTTHVIRIR*RLLGGS
Trigger: AGAACCTCCCAGCAATCGGCATCTAATTCTGATTAC...GTGGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR GCA 90 bp GGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTAACCTGGACTCCTCGTTaGCTTGGCGAGAAAATACTT +
Preference number: 4 (lower is better)
Translates to: GNLQPTDHLSSKPDDYHLTWTPR*LGEKIL
Trigger: AAGTATTTTCTCGCCAAGGCAACGAGGAGTCCAGGT...TAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp CAGTTAAAAATGGGGCAGCCCAGAGAGGTAAAGCAACTCACCAAAGGTAGAGCATCTTTGTGTGAGGTCTaGGAAAGTGGCTTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: QLKMGQPREVKQLTKGRASLCEV*ESGLVS
Trigger: GGAAACTAAGCCACTTTCCCAGACCTCACACAAAGA...TGCTCTACCTTTGGTGAGTTGCTTTACCTCTCTGGGCTGCCCCATTTTTAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp ACCACTCAGCTTAATCAGCTCAGCTCTCTTCTAAAGGGGTCTCTTCTCTGCCTCGAAGAAGAGTTGTCTTaGGCCACACATAAAGTACAC +
Preference number: 4 (lower is better)
Translates to: TTQLNQLSSLLKGSLLCLEEELS*ATHKVH
Trigger: GTGTACTTTATGTGTGGCCCAAGACAACTCTTCTTC...GAGGCAGAGAAGAGACCCCTTTAGAAGAGAGCTGAGCTGATTAAGCTGAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CAA 72 bp CCACATTCAAAGCTGTCCTGGGACACATGCCACGGGTaGGACAAGCTTGGTGTAAATACTTTAATACTCCCA +
Preference number: 4 (lower is better)
Translates to: PHSKLSWDTCHG*DKLGVNTLILP
Trigger: TGGGAGTATTAAAGTATTTACACCAAGCTTGTCCAACCCGTGGCATGTGTCCCAGGACAGCTTTGAATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp GTGGGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCAAAGCTGTTCATTCTaGATCTCTTCTCTGAGGACT +
Preference number: 4 (lower is better)
Translates to: VGNLQPTDHLSSKPDDYHQSCSF*ISSLRT
Trigger: AGTCCTCAGAGAAGAGATTCAGAATGAACAGCTTTG...GTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp GTTAGAGCATGGGTGGTTGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCCACACCAGTGTGCAGCTTTaGTTCCTCCATGAAATTAAA +
Preference number: 4 (lower is better)
Translates to: VRAWVVGSSQKSCFSTTHTSVQL*FLHEIK
Trigger: TTTAATTTCATGGAGGAATCAAAGCTGCACACTGGT...GTGGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR GCA 90 bp ACCACTCAGCTTAATCAGCTCAGCTCTCTTCTAAAGGGGTCTCTTCTCTGCCTCGTTTTAATACCAGTGTaGAGCTTTGATTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: TTQLNQLSSLLKGSLLCLVLIPV*SFDSSM
Trigger: CATGGAGGAATCAAAGCTGCACACTGGTATTAAAAC...GAGGCAGAGAAGAGACCCCTTTAGAAGAGAGCTGAGCTGATTAAGCTGAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp TTCCTAACATTTCTTGGGGACAAGAGTACCATACATGTACTACGAATTGGTACTGTGGGGCTCCTGTCTTaGTCAGCAAGGTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: FLTFLGDKSTIHVLRIGTVGLLS*SARSAQ
Trigger: TTGTGCTGACCTTGCTGACCAAGACAGGAGCCCCAC...AGTACCAATTCGTAGTACATGTATGGTACTCTTGTCCCCAAGAAATGTTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp CGGGTTGGACAAGCTTGGTGTAAATACTTTAATACTCCCAAAGCTCCAAATGTAAGTGAAAGAGAGACCTaGACTCCTCGTTGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RVGQAWCKYFNTPKAPNVSERET*TPRCLG
Trigger: GCCAAGGCAACGAGGAGTCCAGGTCTCTCTTTCACT...TACATTTGGAGCTTTGGGAGTATTAAAGTATTTACACCAAGCTTGTCCAACCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp GTTAGAGCATGGGTGGTTGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCCACACAATGGAATATTTATaGGCCTTCAGTCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VRAWVVGSSQKSCFSTTHTMEYL*AFSPSK
Trigger: CTTTGAAGGACTGAAGGCTCATAAATATTCCATTGT...GTGGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp AGATACCCAGAAGGCACCTCCTCTCATTCAGCTGACAAGCTTCCTAACATTTCTGAAGGTACAGAGATTTaGGAGAGCCTACAAGAGATA +
Preference number: 4 (lower is better)
Translates to: RYPEGTSSHSADKLPNISEGTEI*ESLQEI
Trigger: TATCTCTTGTAGGCTCTCTCAAATCTCTGTACCTTC...AGAAATGTTAGGAAGCTTGTCAGCTGAATGAGAGGAGGTGCCTTCTGGGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR GCA 90 bp AGATACCCAGAAGGCACCTCCTCTCATTCAGCTGACAAGCTTCCTAACATTTCTTATCACCTACACATCTaGCAAGGTAATAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: RYPEGTSSHSADKLPNISYHLHI*QGNSMA
Trigger: TGCCATGCTATTACCTTGGCAGATGTGTAGGTGATA...AGAAATGTTAGGAAGCTTGTCAGCTGAATGAGAGGAGGTGCCTTCTGGGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR GCA 90 bp CAAAGCCAGATGACTATCACCTACACATCTGCCAAGGTAATAGCATGGCAAATACAGAGGTTAACAGCTTaGCATGCATGCAACTGTGTG +
Preference number: 4 (lower is better)
Translates to: QSQMTITYTSAKVIAWQIQRLTA*HACNCV
Trigger: CACACAGTTGCATGCATGGCAAGCTGTTAACCTCTG...TATTTGCCATGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp CGGGTTGGACAAGCTTGGTGTAAATACTTTAATACTCCCAAAGCTCCAAATGTATTAGAAATTAACCTCTaGGCGGACATCTCCGACCGG +
Preference number: 4 (lower is better)
Translates to: RVGQAWCKYFNTPKAPNVLEINL*ADISDR
Trigger: CCGGTCGGAGATGTCCGCCCAGAGGTTAATTTCTAA...TACATTTGGAGCTTTGGGAGTATTAAAGTATTTACACCAAGCTTGTCCAACCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp AGATACCCAGAAGGCACCTCCTCTCATTCAGCTGACAAGCTTCCTAACATTTCTGACTCCTCGTTGCCTTaGCGAGAAAATACTTTATCT +
Preference number: 4 (lower is better)
Translates to: RYPEGTSSHSADKLPNISDSSLP*RENTLS
Trigger: AGATAAAGTATTTTCTCGCCAAGGCAACGAGGAGTC...AGAAATGTTAGGAAGCTTGTCAGCTGAATGAGAGGAGGTGCCTTCTGGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp CGGGTTGGACAAGCTTGGTGTAAATACTTTAATACTCCCAAAGCTCCAAATGTACTTCTGATGGCTTCCTaGAGTTGGACGTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: RVGQAWCKYFNTPKAPNVLLMAS*SWTSLS
Trigger: TGACAGTGACGTCCAACTCCAGGAAGCCATCAGAAG...TACATTTGGAGCTTTGGGAGTATTAAAGTATTTACACCAAGCTTGTCCAACCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp AGATACCCAGAAGGCACCTCCTCTCATTCAGCTGACAAGCTTCCTAACATTTCTATATTAGAGGTGGGATaGATCACTCTAGACCTGTCA +
Preference number: 4 (lower is better)
Translates to: RYPEGTSSHSADKLPNISILEVG*ITLDLS
Trigger: TGACAGGTCTAGAGTGATCCATCCCACCTCTAATAT...AGAAATGTTAGGAAGCTTGTCAGCTGAATGAGAGGAGGTGCCTTCTGGGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp AGATACCCAGAAGGCACCTCCTCTCATTCAGCTGACAAGCTTCCTAACATTTCTTTGTTCTGTAGCCAATaGCACAGATACACCAACACA +
Preference number: 4 (lower is better)
Translates to: RYPEGTSSHSADKLPNISLFCSQ*HRYTNT
Trigger: TGTGTTGGTGTATCTGTGCCATTGGCTACAGAACAA...AGAAATGTTAGGAAGCTTGTCAGCTGAATGAGAGGAGGTGCCTTCTGGGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp CAAAGCCAGATGACTATCACCTACACATCTGCCAAGGTAATAGCATGGCAAATATCTGAATCTCTTCTCTaGGGACTCTGCATTGTCTTG +
Preference number: 4 (lower is better)
Translates to: QSQMTITYTSAKVIAWQISESLL*GLCIVL
Trigger: CAAGACAATGCAGAGTCCTCAGAGAAGAGATTCAGA...TATTTGCCATGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp CGGGTTGGACAAGCTTGGTGTAAATACTTTAATACTCCCAAAGCTCCAAATGTAAGCGTTCCACCTCATTaGTGTAGCAGTGAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RVGQAWCKYFNTPKAPNVSVPPH*CSSERE
Trigger: CTCTCTTTCACTGCTACATCAATGAGGTGGAACGCT...TACATTTGGAGCTTTGGGAGTATTAAAGTATTTACACCAAGCTTGTCCAACCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR GCA 90 bp GGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTAAAAAATCACGAAGACTaGAAGACCAACCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: GNLQPTDHLSSKPDDYHLKNHED*KTNPKS
Trigger: GGATTTTGGGTTGGTCTTGCAGTCTTCGTGATTTTT...TAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp GAGAGCCTACAAGAGATACGAGGCAGTACCCTAGTTTATACTGTTTTATGTATACTCCAGGTTAGAGCATaGGTGGTTGGAAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ESLQEIRGSTLVYTVLCILQVRA*VVGSSQ
Trigger: CTGAGAACTTCCAACCACCCATGCTCTAACCTGGAG...TATACATAAAACAGTATAAACTAGGGTACTGCCTCGTATCTCTTGTAGGCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR TCA 90 bp TTCCTAACATTTCTTGGGGACAAGAGTACCATACATGTACTACGAATTGGTACTGACAACCAGATCCCCTaGCTAAAGCTTGGCTCAATT +
Preference number: 4 (lower is better)
Translates to: FLTFLGDKSTIHVLRIGTDNQIP*LKLGSI
Trigger: AATTGAGCCAAGCTTTAGTCAGGGGATCTGGTTGTC...AGTACCAATTCGTAGTACATGTATGGTACTCTTGTCCCCAAGAAATGTTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp AGATACCCAGAAGGCACCTCCTCTCATTCAGCTGACAAGCTTCCTAACATTTCTCGGGTTGGACAAGCTTaGTGTAAATACTTTAATACT +
Preference number: 4 (lower is better)
Translates to: RYPEGTSSHSADKLPNISRVGQA*CKYFNT
Trigger: AGTATTAAAGTATTTACACCAAGCTTGTCCAACCCG...AGAAATGTTAGGAAGCTTGTCAGCTGAATGAGAGGAGGTGCCTTCTGGGTATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp ATCTCAGCTCAAAGCCAGATGACTATCACCTACACATCTGCCAAGGTAATAGCACTTCCTAACATTTCTTaGGGACAAGAGTACCATACA +
Preference number: 4 (lower is better)
Translates to: ISAQSQMTITYTSAKVIALPNIS*GQEYHT
Trigger: TGTATGGTACTCTTGTCCCCAAGAAATGTTAGGAAG...TGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTGAGCTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR GCA 90 bp GAGAGCCTACAAGAGATACGAGGCAGTACCCTAGTTTATACTGTTTTATGTATACTTTTAGCTTCCCTGTaGCACACTGGAAGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: ESLQEIRGSTLVYTVLCILLASL*HTGRRV
Trigger: AACTCTTCTTCCAGTGTGGCACAGGGAAGCTAAAAG...TATACATAAAACAGTATAAACTAGGGTACTGCCTCGTATCTCTTGTAGGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp AATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTACACAGAAAATACTTTATCTaGCTCCAGAGGTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: NLQPTDHLSSKPDDYHLHRKYFI*LQRSSK
Trigger: TTTGGAAGACCTCTGGAGCCAGATAAAGTATTTTCT...GTGTAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp ATCTCAGCTCAAAGCCAGATGACTATCACCTACACATCTGCCAAGGTAATAGCATTCCAGAACAATAGGTaGTTCAGAAATCAGAAGATC +
Preference number: 4 (lower is better)
Translates to: ISAQSQMTITYTSAKVIAFQNNR*FRNQKI
Trigger: GATCTTCTGATTTCTGAACCACCTATTGTTCTGGAA...TGCTATTACCTTGGCAGATGTGTAGGTGATAGTCATCTGGCTTTGAGCTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CCA 90 bp AATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTACACTCAATTAGGGTTAAGTaGAAGGTACAGAGATTTGAG +
Preference number: 4 (lower is better)
Translates to: NLQPTDHLSSKPDDYHLHSIRVK*KVQRFE
Trigger: CTCAAATCTCTGTACCTTCCACTTAACCCTAATTGA...GTGTAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
3UTR CAA 72 bp TCTGCCAAGGTAATAGCATGGCAAATAGTATTTTTCTaGTTCTGTAGCCAATGGCACAGATACACCAACACA +
Preference number: 4 (lower is better)
Translates to: SAKVIAWQIVFF*FCSQWHRYTNT
Trigger: TGTGTTGGTGTATCTGTGCCATTGGCTACAGAACAAGAAAAATACTATTTGCCATGCTATTACCTTGGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CCA 90 bp GACATCTCCGACCGGCTGGCTAGCCCCGGCCCGCGGGCTCGGCCCTaGTTCCGGCTCCTGGCTCCTCCGAGGTGCGCGAGCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: DISDRLASPGPRARP*FRLLAPPRCASAAA
Trigger: GGCGGCGGCGCTCGCGCACCTCGGAGGAGCCAGGAGCCGGAACCAGGGCCGAGCCCGCGGGCCGGGGCTAGCCAGCCGGTCGGAGATGTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS GCA 90 bp TTGGGGATGTCAAACTTCATGAGCCTGTTCAGCTCCTCCTCTGGCTaGCCACTGCTTCTGATGGCTTCCTGGAGTTGGACGTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: LGMSNFMSLFSSSSG*PLLLMASWSWTSLS
Trigger: TGACAGTGACGTCCAACTCCAGGAAGCCATCAGAAGCAGTGGGCAGCCAGAGGAGGAGCTGAACAGGCTCATGAAGTTTGACATCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS TCA 90 bp TGGTCTGGTGACAAGCTTTGGCTCTGTCCAAGCGTTCCACCTCATTaGTGTAGCAGTGAAAGAGAGACCTGGACTCCTCGTTGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: WSGDKLWLCPSVPPH*CSSERETWTPRCLG
Trigger: GCCAAGGCAACGAGGAGTCCAGGTCTCTCTTTCACTGCTACATCAATGAGGTGGAACGCTTGGACAGAGCCAAAGCTTGTCACCAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp CAGTTAAAAATGGGGCAGCCCAGAGAGGTAAAGCAACTCACCAAAGGTAGAGCAGATGGCTTCCTGGAGTaGGACGTCACTGTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: QLKMGQPREVKQLTKGRADGFLE*DVTVKG
Trigger: GCCCTTGACAGTGACGTCCAACTCCAGGAAGCCATC...TGCTCTACCTTTGGTGAGTTGCTTTACCTCTCTGGGCTGCCCCATTTTTAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS TCA 90 bp CTGGCTCCAGAGGTCTTCCAAAGTCTGACACAAAGCTGTTCATTCTaGATCTCTTCTCTGAGGACTCTGCATTGTCTTGGTGTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: LAPEVFQSLTQSCSF*ISSLRTLHCLGVGL
Trigger: GAGCCCCACACCAAGACAATGCAGAGTCCTCAGAGAAGAGATTCAGAATGAACAGCTTTGTGTCAGACTTTGGAAGACCTCTGGAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp AGAGGTGTCCAATCTTTTAGCTTCCCTGTGCCACACTGGAAGAAGAGTTGTCTTGGACTCTGCATTGTCTaGGTGTGGGGCTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: RGVQSFSFPVPHWKKSCLGLCIV*VWGSCL
Trigger: AAGACAGGAGCCCCACACCAAGACAATGCAGAGTCC...AAGACAACTCTTCTTCCAGTGTGGCACAGGGAAGCTAAAAGATTGGACACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp GTGGGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACGACCTGGACTCCTCGTaGCCTTGGCGAGAAAATACT +
Preference number: 5 (lower is better)
Translates to: VGNLQPTDHLSSKPDDYHDLDSS*PWRENT
Trigger: AGTATTTTCTCGCCAAGGCAACGAGGAGTCCAGGTC...GTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp GTTAGAGCATGGGTGGTTGGAAGTTCTCAGAAGAGCTGTTTCAGCACAACCCACTTAGAGCATGGGTGGTaGGAAGTTCTCAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: VRAWVVGSSQKSCFSTTHLEHGW*EVLRRA
Trigger: AGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAA...GTGGGTTGTGCTGAAACAGCTCTTCTGAGAACTTCCAACCACCCATGCTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp CAGTTAAAAATGGGGCAGCCCAGAGAGGTAAAGCAACTCACCAAAGGTAGAGCACCAGAGGTTAACAGCTaGCCATGCATGCAACTGTGT +
Preference number: 5 (lower is better)
Translates to: QLKMGQPREVKQLTKGRAPEVNS*PCMQLC
Trigger: ACACAGTTGCATGCATGGCAAGCTGTTAACCTCTGG...TGCTCTACCTTTGGTGAGTTGCTTTACCTCTCTGGGCTGCCCCATTTTTAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp GGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTAGGACTCCTCGTTGCCTaGGCGAGAAAATACTTTATC +
Preference number: 5 (lower is better)
Translates to: GNLQPTDHLSSKPDDYHLGLLVA*ARKYFI
Trigger: GATAAAGTATTTTCTCGCCAAGGCAACGAGGAGTCC...TAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp CCAGAGGTTAACAGCTTGCCATGCATGCAACTGTGTGCGCAAAATCAAGTTGTTTCTCAATCCAGGTCTTaGTGTGAGGTCTGGGAAAGT +
Preference number: 5 (lower is better)
Translates to: PEVNSLPCMQLCAQNQVVSQSRS*CEVWES
Trigger: ACTTTCCCAGACCTCACACAAAGACCTGGATTGAGA...AACAACTTGATTTTGCGCACACAGTTGCATGCATGGCAAGCTGTTAACCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS TCA 90 bp AGGAAGACCCTTTACAGAGCATGTTTCTCAATCCAGGTCTTTGTGTaGGGTCTGGGAAAGTGGCTTAGTTTCCAGAACAATAGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: RKTLYRACFSIQVFV*GLGKWLSFQNNRWF
Trigger: GAACCACCTATTGTTCTGGAAACTAAGCCACTTTCCCAGACCTCACACAAAGACCTGGATTGAGAAACATGCTCTGTAAAGGGTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp CCAGAGGTTAACAGCTTGCCATGCATGCAACTGTGTGCGCAAAATCAAGTTGTTAGAATTAGATGCCGATaGCTGGGAGGTTCTGTTAGA +
Preference number: 5 (lower is better)
Translates to: PEVNSLPCMQLCAQNQVVRIRCR*LGGSVR
Trigger: TCTAACAGAACCTCCCAGCAATCGGCATCTAATTCT...AACAACTTGATTTTGCGCACACAGTTGCATGCATGGCAAGCTGTTAACCTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CCA 90 bp CCCTTTACAGAGCATGTTTCTCAATCCAGGTCTTTGTGTGAGGTCTaGGAAAGTGGCTTAGTTTCCAGAACAATAGGTGGTTCAGAAATC +
Preference number: 5 (lower is better)
Translates to: PFTEHVSQSRSLCEV*ESGLVSRTIGGSEI
Trigger: GATTTCTGAACCACCTATTGTTCTGGAAACTAAGCCACTTTCCCAGACCTCACACAAAGACCTGGATTGAGAAACATGCTCTGTAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp GGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCTATCTGTGTTCACAAAGTaGGGGATGTCAAACTTCATG +
Preference number: 5 (lower is better)
Translates to: GNLQPTDHLSSKPDDYHLSVFTK*GMSNFM
Trigger: CATGAAGTTTGACATCCCCAACTTTGTGAACACAGA...TAGGTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp GTGGGGAATTTACAACCCACTGACCATCTCAGCTCAAAGCCAGATGACTATCACCAAATAGTATTTTTCTaGTTCTGTAGCCAATGGCAC +
Preference number: 5 (lower is better)
Translates to: VGNLQPTDHLSSKPDDYHQIVFF*FCSQWH
Trigger: GTGCCATTGGCTACAGAACAAGAAAAATACTATTTG...GTGATAGTCATCTGGCTTTGAGCTGAGATGGTCAGTGGGTTGTAAATTCCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS-3UTR CAA 90 bp CGGGTTGGACAAGCTTGGTGTAAATACTTTAATACTCCCAAAGCTCCAAATGTAGCTGACAATAGGTATTaGGCCAAATTTTTCAACAAG +
Preference number: 5 (lower is better)
Translates to: RVGQAWCKYFNTPKAPNVADNRY*AKFFNK
Trigger: CTTGTTGAAAAATTTGGCCAAATACCTATTGTCAGC...TACATTTGGAGCTTTGGGAGTATTAAAGTATTTACACCAAGCTTGTCCAACCCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CCA 72 bp GACCGGCTGGCTAGCCCCGGCCCGCGGGCTCGGCCCTaGTTCCGGCTCCTGGCTCCTCCGAGGTGCGCGAGC +
Preference number: 6 (lower is better)
Translates to: DRLASPGPRARP*FRLLAPPRCAS
Trigger: GCTCGCGCACCTCGGAGGAGCCAGGAGCCGGAACCAGGGCCGAGCCCGCGGGCCGGGGCTAGCCAGCCGGTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CCA 72 bp GCCGATTGCTGGGAGGTTCTGTTAGAAATTAACCTCTaGGCGGACATCTCCGACCGGCTGGCTAGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: ADCWEVLLEINL*ADISDRLASPG
Trigger: GCCGGGGCTAGCCAGCCGGTCGGAGATGTCCGCCCAGAGGTTAATTTCTAACAGAACCTCCCAGCAATCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS TCA 72 bp GCCTGTTCAGCTCCTCCTCTGGCTGCCCACTGCTTCTaGTGGCTTCCTGGAGTTGGACGTCACTGTCAAGGG +
Preference number: 6 (lower is better)
Translates to: ACSAPPLAAHCF*WLPGVGRHCQG
Trigger: CCCTTGACAGTGACGTCCAACTCCAGGAAGCCATCAGAAGCAGTGGGCAGCCAGAGGAGGAGCTGAACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CCA 72 bp TCCTCCTCTGGCTGCCCACTGCTTCTGATGGCTTCCTaGAGTTGGACGTCACTGTCAAGGGCTGTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SSSGCPLLLMAS*SWTSLSRAVVW
Trigger: CCAGACCACAGCCCTTGACAGTGACGTCCAACTCCAGGAAGCCATCAGAAGCAGTGGGCAGCCAGAGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CAA 72 bp CTCTGGCTGCCCACTGCTTCTGATGGCTTCCTGGAGTaGGACGTCACTGTCAAGGGCTGTGGTCTGGTGACA +
Preference number: 6 (lower is better)
Translates to: LWLPTASDGFLE*DVTVKGCGLVT
Trigger: TGTCACCAGACCACAGCCCTTGACAGTGACGTCCAACTCCAGGAAGCCATCAGAAGCAGTGGGCAGCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS TCA 72 bp TGGAGTTGGACGTCACTGTCAAGGGCTGTGGTCTGGTaGCAAGCTTTGGCTCTGTCCAAGCGTTCCACCTCA +
Preference number: 6 (lower is better)
Translates to: WSWTSLSRAVVW*QALALSKRSTS
Trigger: TGAGGTGGAACGCTTGGACAGAGCCAAAGCTTGTCACCAGACCACAGCCCTTGACAGTGACGTCCAACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CCA 72 bp TGGCTTCCTGGAGTTGGACGTCACTGTCAAGGGCTGTaGTCTGGTGACAAGCTTTGGCTCTGTCCAAGCGTT +
Preference number: 6 (lower is better)
Translates to: WLPGVGRHCQGL*SGDKLWLCPSV
Trigger: AACGCTTGGACAGAGCCAAAGCTTGTCACCAGACCACAGCCCTTGACAGTGACGTCCAACTCCAGGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS TCA 72 bp GGTCTGTGTTCACAAAGTTGGGGATGTCAAACTTCATaGGCCTGTTCAGCTCCTCCTCTGGCTGCCCACTGC +
Preference number: 6 (lower is better)
Translates to: GLCSQSWGCQTS*ACSAPPLAAHC
Trigger: GCAGTGGGCAGCCAGAGGAGGAGCTGAACAGGCTCATGAAGTTTGACATCCCCAACTTTGTGAACACAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS TCA 72 bp GACAAGCTTTGGCTCTGTCCAAGCGTTCCACCTCATTaGTGTAGCAGTGAAAGAGAGACCTGGACTCCTCGT +
Preference number: 6 (lower is better)
Translates to: DKLWLCPSVPPH*CSSERETWTPR
Trigger: ACGAGGAGTCCAGGTCTCTCTTTCACTGCTACATCAATGAGGTGGAACGCTTGGACAGAGCCAAAGCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CAA 72 bp GTAGCAGTGAAAGAGAGACCTGGACTCCTCGTTGCCTaGGCGAGAAAATACTTTATCTGGCTCCAGAGGTCT +
Preference number: 6 (lower is better)
Translates to: VAVKERPGLLVA*ARKYFIWLQRS
Trigger: AGACCTCTGGAGCCAGATAAAGTATTTTCTCGCCAAGGCAACGAGGAGTCCAGGTCTCTCTTTCACTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CAA 90 bp CTCATTGATGTAGCAGTGAAAGAGAGACCTGGACTCCTCGTTGCCTaGGCGAGAAAATACTTTATCTGGCTCCAGAGGTCTTCCAAAGTC +
Preference number: 6 (lower is better)
Translates to: LIDVAVKERPGLLVA*ARKYFIWLQRSSKV
Trigger: GACTTTGGAAGACCTCTGGAGCCAGATAAAGTATTTTCTCGCCAAGGCAACGAGGAGTCCAGGTCTCTCTTTCACTGCTACATCAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CCA 72 bp GAGCATGTTTCTCAATCCAGGTCTTTGTGTGAGGTCTaGGAAAGTGGCTTAGTTTCCAGAACAATAGGTGGT +
Preference number: 6 (lower is better)
Translates to: EHVSQSRSLCEV*ESGLVSRTIGG
Trigger: ACCACCTATTGTTCTGGAAACTAAGCCACTTTCCCAGACCTCACACAAAGACCTGGATTGAGAAACATGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CAA 72 bp AGACCCTTTACAGAGCATGTTTCTCAATCCAGGTCTTaGTGTGAGGTCTGGGAAAGTGGCTTAGTTTCCAGA +
Preference number: 6 (lower is better)
Translates to: RPFTEHVSQSRS*CEVWESGLVSR
Trigger: TCTGGAAACTAAGCCACTTTCCCAGACCTCACACAAAGACCTGGATTGAGAAACATGCTCTGTAAAGGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CAA 90 bp TCTTCAGGAAGACCCTTTACAGAGCATGTTTCTCAATCCAGGTCTTaGTGTGAGGTCTGGGAAAGTGGCTTAGTTTCCAGAACAATAGGT +
Preference number: 6 (lower is better)
Translates to: SSGRPFTEHVSQSRS*CEVWESGLVSRTIG
Trigger: ACCTATTGTTCTGGAAACTAAGCCACTTTCCCAGACCTCACACAAAGACCTGGATTGAGAAACATGCTCTGTAAAGGGTCTTCCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS TCA 72 bp GAGGTCTTCCAAAGTCTGACACAAAGCTGTTCATTCTaGATCTCTTCTCTGAGGACTCTGCATTGTCTTGGT +
Preference number: 6 (lower is better)
Translates to: EVFQSLTQSCSF*ISSLRTLHCLG
Trigger: ACCAAGACAATGCAGAGTCCTCAGAGAAGAGATTCAGAATGAACAGCTTTGTGTCAGACTTTGGAAGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257776.5
CDS CCA 72 bp GGTCTGGGAAAGTGGCTTAGTTTCCAGAACAATAGGTaGTTCAGAAATCAGAAGATCATCCTCCCCAAAGTA +
Preference number: 6 (lower is better)
Translates to: GLGKWLSFQNNR*FRNQKIILPKV
Trigger: TACTTTGGGGAGGATGATCTTCTGATTTCTGAACCACCTATTGTTCTGGAAACTAAGCCACTTTCCCAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257776.5