RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPZL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197965

Ensembl transcript IDs: ENST00000359523.7, ENST00000392121.7, ENST00000448405.5, ENST00000464954.1, ENST00000465787.5, ENST00000487858.1, ENST00000498279.1

Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTaGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCG +
Preference number: 1 (lower is better)
Translates to: GVVREEQASRCHSSE*PPQHQLHQHMVPAP
Trigger: CGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR TCA 90 bp CAGAGCAGACGCTGCCCAGCTTCAGACATGTGTGGTGACCAAACCTaGTCCCTGTTGACTCACACAGATGTGGCATGTAAGGTGGAGCGT +
Preference number: 1 (lower is better)
Translates to: QSRRCPASDMCGDQT*SLLTHTDVACKVER
Trigger: ACGCTCCACCTTACATGCCACATCTGTGTGAGTCAACAGGGATCAGGTTTGGTCACCACACATGTCTGAAGCTGGGCAGCGTCTGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 90 bp CACTTTGTGGAAATGTCTCAGGGCCAGCACTGTGTGTCACTCTCTTaGGCTGGGCCTATGAACATGGAAGGCAGCAGGGCAGGCGTTTTT +
Preference number: 1 (lower is better)
Translates to: HFVEMSQGQHCVSLS*AGPMNMEGSRAGVF
Trigger: AAAAACGCCTGCCCTGCTGCCTTCCATGTTCATAGGCCCAGCCCAAGAGAGTGACACACAGTGCTGGCCCTGAGACATTTCCACAAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 90 bp TCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATaGTGGCAAAGGCTCACCAGGAGTCTCAGCTTGAAGGATGGTGAC +
Preference number: 1 (lower is better)
Translates to: SSVPQAQPWSAMWFS*WQRLTRSLSLKDGD
Trigger: GTCACCATCCTTCAAGCTGAGACTCCTGGTGAGCCTTTGCCACCATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 90 bp CAGGCCTGTCTACAATGTGTGTCCTCTGTACCTCAAGCACAGCCCTaGTCAGCTATGTGGTTTTCATGGTGGCAAAGGCTCACCAGGAGT +
Preference number: 1 (lower is better)
Translates to: QACLQCVSSVPQAQP*SAMWFSWWQRLTRS
Trigger: ACTCCTGGTGAGCCTTTGCCACCATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACATTGTAGACAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR GCA 90 bp AGGAATATTGGCAGAAGGCATGCTTCAGGCCCAGGGAACAGCATGTaGAAAGGCCCAGAAGCAGGCACACGGACGGCATTTTTGAAGAAA +
Preference number: 1 (lower is better)
Translates to: RNIGRRHASGPGNSM*KGPEAGTRTAFLKK
Trigger: TTTCTTCAAAAATGCCGTCCGTGTGCCTGCTTCTGGGCCTTTGCACATGCTGTTCCCTGGGCCTGAAGCATGCCTTCTGCCAATATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR CCA 90 bp CAATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTaGTTTTCATGGTGGCAAAGGCTCACCAGGAGTCTCAGCTTGAAG +
Preference number: 1 (lower is better)
Translates to: QCVSSVPQAQPWSAM*FSWWQRLTRSLSLK
Trigger: CTTCAAGCTGAGACTCCTGGTGAGCCTTTGCCACCATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR TCA 90 bp TTCATGGTGGCAAAGGCTCACCAGGAGTCTCAGCTTGAAGGATGGTaGCAATCTCAACACCCTTCCCCTCCAAACATAAGAGGCCTTCCA +
Preference number: 1 (lower is better)
Translates to: FMVAKAHQESQLEGW*QSQHPSPPNIRGLP
Trigger: TGGAAGGCCTCTTATGTTTGGAGGGGAAGGGTGTTGAGATTGTCACCATCCTTCAAGCTGAGACTCCTGGTGAGCCTTTGCCACCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR TCA 90 bp AGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTaGAGGCTCTTGCTCTCAGGGAGCTCCGAAATGTTTCATTTATTC +
Preference number: 1 (lower is better)
Translates to: STSFTNTWSRHRKKK*RLLLSGSSEMFHLF
Trigger: GAATAAATGAAACATTTCGGAGCTCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR GCA 90 bp AAGACGACCCTGTTTGCCAGGACGAAGACATGGAGAGGGCAGATCTaGCCTTTAGGCAACCTTAGTTCGTTATCTGCAACCAGGAAAGGA +
Preference number: 1 (lower is better)
Translates to: KTTLFARTKTWRGQI*PLGNLSSLSATRKG
Trigger: TCCTTTCCTGGTTGCAGATAACGAACTAAGGTTGCCTAAAGGGCAGATCTGCCCTCTCCATGTCTTCGTCCTGGCAAACAGGGTCGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 90 bp TCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGGTaGCAAAGGCTCACCAGGAGTCTCAGCTTGAAGGATGGTGACAAT +
Preference number: 1 (lower is better)
Translates to: SVPQAQPWSAMWFSW*QRLTRSLSLKDGDN
Trigger: ATTGTCACCATCCTTCAAGCTGAGACTCCTGGTGAGCCTTTGCCACCATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR TCA 90 bp GCTGCCCAGCTTCAGACATGTGTGGTGACCAAACCTGATCCCTGTTaGCTCACACAGATGTGGCATGTAAGGTGGAGCGTTACAAGAATA +
Preference number: 1 (lower is better)
Translates to: AAQLQTCVVTKPDPC*LTQMWHVRWSVTRI
Trigger: TATTCTTGTAACGCTCCACCTTACATGCCACATCTGTGTGAGTCAACAGGGATCAGGTTTGGTCACCACACATGTCTGAAGCTGGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 90 bp GATGCCCAAAAAGTTTTAGGATGCAAGGCAGAGTTGACCACTTTGTaGAAATGTCTCAGGGCCAGCACTGTGTGTCACTCTCTTGGGCTG +
Preference number: 1 (lower is better)
Translates to: DAQKVLGCKAELTTL*KCLRASTVCHSLGL
Trigger: CAGCCCAAGAGAGTGACACACAGTGCTGGCCCTGAGACATTTCCACAAAGTGGTCAACTCTGCCTTGCATCCTAAAACTTTTTGGGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR TCA 90 bp CTATGTGGTTTTCATGGTGGCAAAGGCTCACCAGGAGTCTCAGCTTaGAGGATGGTGACAATCTCAACACCCTTCCCCTCCAAACATAAG +
Preference number: 1 (lower is better)
Translates to: LCGFHGGKGSPGVSA*RMVTISTPFPSKHK
Trigger: CTTATGTTTGGAGGGGAAGGGTGTTGAGATTGTCACCATCCTTCAAGCTGAGACTCCTGGTGAGCCTTTGCCACCATGAAAACCACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR TCA 90 bp CTTCCATTCATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTaGGGAGCTTTGTCTTGTTTTGTTTCCTTATGCTTAGCACAGTGC +
Preference number: 1 (lower is better)
Translates to: LPFMSPVTSTLWQAP*GALSCFVSLCLAQC
Trigger: GCACTGTGCTAAGCATAAGGAAACAAAACAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATGAATGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR GCA 90 bp CACCACATTGTCTTCCAGACTGAGGTTAAAGCTCTCAGACATCTGTaGCTACCACCTAGACTACACTACCCTCTCAAGTTCCTAAGGGAC +
Preference number: 1 (lower is better)
Translates to: HHIVFQTEVKALRHL*LPPRLHYPLKFLRD
Trigger: GTCCCTTAGGAACTTGAGAGGGTAGTGTAGTCTAGGTGGTAGGCACAGATGTCTGAGAGCTTTAACCTCAGTCTGGAAGACAATGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR GCA 90 bp GTAACATGTATTGAGCAGCTAAGTGCCAGGTGCTGTTCCCTTTACTaGAGACGGAGCAGTGAACAAAACAGCAAGGTTCTGGTCTCTTGT +
Preference number: 1 (lower is better)
Translates to: VTCIEQLSARCCSLY*RRSSEQNSKVLVSC
Trigger: ACAAGAGACCAGAACCTTGCTGTTTTGTTCACTGCTCCGTCTGCAGTAAAGGGAACAGCACCTGGCACTTAGCTGCTCAATACATGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR CCA 90 bp TTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGACGAAGACATaGAGAGGGCAGATCTGCCCTTTAGGCAACCTTAGTTCGTTATCT +
Preference number: 1 (lower is better)
Translates to: LAHNFKTTLFARTKT*RGQICPLGNLSSLS
Trigger: AGATAACGAACTAAGGTTGCCTAAAGGGCAGATCTGCCCTCTCCATGTCTTCGTCCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 90 bp GTTCCCTTTACTGCAGACGGAGCAGTGAACAAAACAGCAAGGTTCTaGTCTCTTGTTAACTATGTTCTAATGCGGGAGAACAGACAAGTG +
Preference number: 1 (lower is better)
Translates to: VPFTADGAVNKTARF*SLVNYVLMRENRQV
Trigger: CACTTGTCTGTTCTCCCGCATTAGAACATAGTTAACAAGAGACCAGAACCTTGCTGTTTTGTTCACTGCTCCGTCTGCAGTAAAGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR CCA 90 bp CAGGCCCAGCCCCTCTTCTCTGTTCCTTTATTAGCTAAGTGGCCCTaGGTAAGCCATATAATCTTTCAAACAATGGGATTAAGATTAGTA +
Preference number: 1 (lower is better)
Translates to: QAQPLFSVPLLAKWP*VSHIIFQTMGLRLV
Trigger: TACTAATCTTAATCCCATTGTTTGAAAGATTATATGGCTTACCCAGGGCCACTTAGCTAATAAAGGAACAGAGAAGAGGGGCTGGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR TCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAACTTGGGCTGGGCCTATaGACATGGAAGGCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQLGLGL*TWKAAG
Trigger: CCCTGCTGCCTTCCATGTTCATAGGCCCAGCCCAAG...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGCACCGCAAGAAGAAGTaGAGGCTCTTGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: VVREEQASRCHSSEWPPQHRKKK*RLLLSG
Trigger: CCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTG...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAACCAGGAGTCTCAGCTTaGAGGATGGTGACAATCTCA +
Preference number: 2 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQPGVSA*RMVTIS
Trigger: TGAGATTGTCACCATCCTTCAAGCTGAGACTCCTGG...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR GCA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGACACAGAGCAGACGCTaGCCAGCTTCAGACATGTGT +
Preference number: 2 (lower is better)
Translates to: VVREEQASRCHSSEWPPQTQSRR*PASDMC
Trigger: ACACATGTCTGAAGCTGGGCAGCGTCTGCTCTGTGT...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAGTTGACCACTTTGTaGAAATGTCTCAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQELTTL*KCLRAS
Trigger: GCTGGCCCTGAGACATTTCCACAAAGTGGTCAACTC...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAAAACCTGATCCCTGTTaGCTCACACAGATGTGGCAT +
Preference number: 2 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQKPDPC*LTQMWH
Trigger: ATGCCACATCTGTGTGAGTCAACAGGGATCAGGTTT...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR GCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAACACAGAGCAGACGCTaGCCAGCTTCAGACATGTGT +
Preference number: 2 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGTQSRR*PASDMC
Trigger: ACACATGTCTGAAGCTGGGCAGCGTCTGCTCTGTGT...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGATGTGGTTTTCATGGTaGCAAAGGCTCACCAGGAGT +
Preference number: 2 (lower is better)
Translates to: VVREEQASRCHSSEWPPQMWFSW*QRLTRS
Trigger: ACTCCTGGTGAGCCTTTGCCACCATGAAAACCACAT...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGATGTGGTGACCAAACCTaGTCCCTGTTGACTCACACA +
Preference number: 2 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGCGDQT*SLLTHT
Trigger: TGTGTGAGTCAACAGGGATCAGGTTTGGTCACCACA...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGGACTGTAAGGAAACATaGCACAGGCCTGTCTACAAT +
Preference number: 2 (lower is better)
Translates to: VVREEQASRCHSSEWPPQDCKET*HRPVYN
Trigger: ATTGTAGACAGGCCTGTGTCATGTTTCCTTACAGTC...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGAGGCTCATCTCAGTGTaGGCAGCTTCCTTCAGGGAA +
Preference number: 2 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLRLISV*AASFRE
Trigger: TTCCCTGAAGGAAGCTGCTCACACTGAGATGAGCCT...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR CCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAATGTGTGTCACTCTCTTaGGCTGGGCCTATGAACATG +
Preference number: 2 (lower is better)
Translates to: PTAPASPTHGPGTARRSECVSLS*AGPMNM
Trigger: CATGTTCATAGGCCCAGCCCAAGAGAGTGACACACA...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGGGCAGAGCACCATGCTaGCAGCTGCCCTTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARGRAPC*QLPLPG
Trigger: CCCAGGCAAGGGCAGCTGCCAGCATGGTGCTCTGCC...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGTTTTATTCCCTTTGTaGATTCTGTTGGAACTCAGC +
Preference number: 2 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQVLFPL*ILLELS
Trigger: GCTGAGTTCCAACAGAATTCACAAAGGGAATAAAAC...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAATTCAGACATGTGTGGTaGCCAAACCTGATCCCTGTT +
Preference number: 2 (lower is better)
Translates to: PTAPASPTHGPGTARRSEFRHVW*PNLIPV
Trigger: AACAGGGATCAGGTTTGGTCACCACACATGTCTGAA...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAGATGCAAGGCAGAGTTaGCCACTTTGTGGAAATGTC +
Preference number: 2 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGDARQS*PLCGNV
Trigger: GACATTTCCACAAAGTGGTCAACTCTGCCTTGCATC...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGCTGCAGACGGAGCAGTaGACAAAACAGCAAGGTTCT +
Preference number: 2 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLLQTEQ*TKQQGS
Trigger: AGAACCTTGCTGTTTTGTTCACTGCTCCGTCTGCAG...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR GCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAAAAGAAGGTGATTCTTaGCAGCTGCAGTGGTGCAAC +
Preference number: 2 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGKEGDS*QLQWCN
Trigger: GTTGCACCACTGCAGCTGGCAAGAATCACCTTCTTT...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAATGTGGCATGTAAGGTaGAGCGTTACAAGAATAACA +
Preference number: 2 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQMWHVR*SVTRIT
Trigger: TGTTATTCTTGTAACGCTCCACCTTACATGCCACAT...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGCCTCAAGCACAGCCCTaGTCAGCTATGTGGTTTTCA +
Preference number: 2 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLPQAQP*SAMWFS
Trigger: TGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGG...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR TCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGACAACTGTGTCCAGAATaGAGTGACCTTCGGCATTTA +
Preference number: 2 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGQLCPE*SDLRHL
Trigger: TAAATGCCGAAGGTCACTTCATTCTGGACACAGTTG...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAAAAAGCGAAAGAAGGTaGTTCTCTAGAGAGCGAGCT +
Preference number: 2 (lower is better)
Translates to: PTAPASPTHGPGTARRSEKSERR*FSRERA
Trigger: AGCTCGCTCTCTAGAGAATCACCTTCTTTCGCTTTT...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGACTGTAAGGAAACATaGCACAGGCCTGTCTACAAT +
Preference number: 2 (lower is better)
Translates to: PTAPASPTHGPGTARRSEDCKET*HRPVYN
Trigger: ATTGTAGACAGGCCTGTGTCATGTTTCCTTACAGTC...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR GCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGAAAGAAGGTGATTCTTaGCAGCTGCAGTGGTGCAAC +
Preference number: 2 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLKEGDS*QLQWCN
Trigger: GTTGCACCACTGCAGCTGGCAAGAATCACCTTCTTT...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR GCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAATATCTTACCACCTTGTaGACACCTCAAAATCTCAAT +
Preference number: 2 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQYLTTL*TPQNLN
Trigger: ATTGAGATTTTGAGGTGTGCACAAGGTGGTAAGATA...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGCAGGGAAACCTGTCCTaGCAGAGCACCATGCTGGCA +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARQGNLS*QSTMLA
Trigger: TGCCAGCATGGTGCTCTGCCAGGACAGGTTTCCCTG...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAACAAATAAATGGTACTaGTACTGTGCTAAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGTNKWY*YCAKGH
Trigger: GTGGCCTTTAGCACAGTATCAGTACCATTTATTTGT...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGTTTTATTCCCTTTGTaGATTCTGTTGGAACTCAGC +
Preference number: 2 (lower is better)
Translates to: PTAPASPTHGPGTARRSEVLFPL*ILLELS
Trigger: GCTGAGTTCCAACAGAATTCACAAAGGGAATAAAAC...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGACTGTTGAGAAAGCAGTaGAAAAACAATGCCCCTTTT +
Preference number: 2 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGLLRKQ*KNNAPF
Trigger: AAAAGGGGCATTGTTTTTTCACTGCTTTCTCAACAG...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR GCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAACAAAAAGTTTTAGGATaGAAGGCAGAGTTGACCACT +
Preference number: 2 (lower is better)
Translates to: PTAPASPTHGPGTARRSEQKVLG*KAELTT
Trigger: AGTGGTCAACTCTGCCTTGCATCCTAAAACTTTTTG...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR GCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGCTTGGGAAGAGGTCCTaGCCTGAGAGGCTCATCTCA +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARLGKRS*PERLIS
Trigger: TGAGATGAGCCTCTCAGGGCAGGACCTCTTCCCAAG...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAGCCAGGACGAAGACATaGAGAGGGCAGATCTGCCCT +
Preference number: 2 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRARTKT*RGQICP
Trigger: AGGGCAGATCTGCCCTCTCCATGTCTTCGTCCTGGC...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAAACATAAGTGTTGAATaGTCTTCACCACACTTTCCA +
Preference number: 2 (lower is better)
Translates to: PTAPASPTHGPGTARRSENISVE*SSPHFP
Trigger: TGGAAAGTGTGGTGAAGATCATTCAACACTTATGTT...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGACACCGCAAGAAGAAGTaGAGGCTCTTGCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRHRKKK*RLLLSG
Trigger: CCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTG...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR TCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGAGGCTCATCTCAGTGTaGGCAGCTTCCTTCAGGGAA +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARRLISV*AASFRE
Trigger: TTCCCTGAAGGAAGCTGCTCACACTGAGATGAGCCT...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGCTAAGTAATGCCTTTTaGGTGCTCCCATACAGAATT +
Preference number: 2 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLLSNAF*VLPYRI
Trigger: AATTCTGTATGGGAGCACTCAAAAGGCATTACTTAG...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR CCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGGTCACTCTCTTGGGCTaGGCCTATGAACATGGAAGG +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARVTLLG*AYEHGR
Trigger: CCTTCCATGTTCATAGGCCCAGCCCAAGAGAGTGAC...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAAGCTTCACCAACACATaGTCCCGGCACCGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRSFTNT*SRHRKK
Trigger: CTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCT...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR CCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGTTTGAGGTGTCTGGTTaGGCAGGAGGCCAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARFEVSG*AGGQEV
Trigger: GACTTCTTGGCCTCCTGCCCAACCAGACACCTCAAA...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CAA 90 bp ATAGATGCCCAAAAAGTTTTAGGATGCAAGGCAGAGTTGACCACTTaGTGGAAATGTCTCAGGGCCAGCACTGTGTGTCACTCTCTTGGG +
Preference number: 2 (lower is better)
Translates to: IDAQKVLGCKAELTT*WKCLRASTVCHSLG
Trigger: CCCAAGAGAGTGACACACAGTGCTGGCCCTGAGACATTTCCACAAAGTGGTCAACTCTGCCTTGCATCCTAAAACTTTTTGGGCATCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CAA 90 bp ACTTCCATTCATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTaGAGGAGCTTTGTCTTGTTTTGTTTCCTTATGCTTAGCACAGTG +
Preference number: 2 (lower is better)
Translates to: TSIHVTCHLHPVASS*RSFVLFCFLMLSTV
Trigger: CACTGTGCTAAGCATAAGGAAACAAAACAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATGAATGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR GCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGGTTTTGAAGCTCATATaGCCTTTATCTTACCACCTT +
Preference number: 2 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLVLKLI*PLSYHL
Trigger: AAGGTGGTAAGATAAAGGGCATATGAGCTTCAAAAC...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR GCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGTGGAGAGGGCAGATCTaGCCTTTAGGCAACCTTAGT +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARWRGQI*PLGNLS
Trigger: ACTAAGGTTGCCTAAAGGGCAGATCTGCCCTCTCCA...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGCTTTGTGAATTCTGTTaGAACTCAGCCTTCAAACAT +
Preference number: 2 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLLCEFC*NSAFKH
Trigger: ATGTTTGAAGGCTGAGTTCCAACAGAATTCACAAAG...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR CCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGGAGTTGACCACTTTGTaGAAATGTCTCAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARELTTL*KCLRAS
Trigger: GCTGGCCCTGAGACATTTCCACAAAGTGGTCAACTC...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGATTTGAGGTGTCTGGTTaGGCAGGAGGCCAAGAAGTC +
Preference number: 2 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRFEVSG*AGGQEV
Trigger: GACTTCTTGGCCTCCTGCCCAACCAGACACCTCAAA...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR GCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAGATTCTCTGCCAGAATaGCAGGGCACTGACAGAGTT +
Preference number: 2 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRDSLPE*QGTDRV
Trigger: AACTCTGTCAGTGCCCTGGCATTCTGGCAGAGAATC...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR CCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGATGTGGTTTTCATGGTaGCAAAGGCTCACCAGGAGT +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARMWFSW*QRLTRS
Trigger: ACTCCTGGTGAGCCTTTGCCACCATGAAAACCACAT...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGCAACTGTGTCCAGAATaGAGTGACCTTCGGCATTTA +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARQLCPE*SDLRHL
Trigger: TAAATGCCGAAGGTCACTTCATTCTGGACACAGTTG...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR GCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGTATCTTACCACCTTGTaGACACCTCAAAATCTCAAT +
Preference number: 2 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMYLTTL*TPQNLN
Trigger: ATTGAGATTTTGAGGTGTGCACAAGGTGGTAAGATA...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGACAAATAAATGGTACTaGTACTGTGCTAAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARTNKWY*YCAKGH
Trigger: GTGGCCTTTAGCACAGTATCAGTACCATTTATTTGT...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGATGTGGCATGTAAGGTaGAGCGTTACAAGAATAACA +
Preference number: 2 (lower is better)
Translates to: ECSHTELAHNFKTTLFARMWHVR*SVTRIT
Trigger: TGTTATTCTTGTAACGCTCCACCTTACATGCCACAT...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR TCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAAACATCCCCAGAAGATaGCAAGATGAGAAGAAAAAG +
Preference number: 2 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRNIPRR*QDEKKK
Trigger: CTTTTTCTTCTCATCTTGTCATCTTCTGGGGATGTT...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR CCA 72 bp GTCTCAGGGCCAGCACTGTGTGTCACTCTCTTGGGCTaGGCCTATGAACATGGAAGGCAGCAGGGCAGGCGT +
Preference number: 3 (lower is better)
Translates to: VSGPALCVTLLG*AYEHGRQQGRR
Trigger: ACGCCTGCCCTGCTGCCTTCCATGTTCATAGGCCCAGCCCAAGAGAGTGACACACAGTGCTGGCCCTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 72 bp CTCAGTGTGAGCAGCTTCCTTCAGGGAAACCTGTCCTaGCAGAGCACCATGCTGGCAGCTGCCCTTGCCTGG +
Preference number: 3 (lower is better)
Translates to: LSVSSFLQGNLS*QSTMLAAALAW
Trigger: CCAGGCAAGGGCAGCTGCCAGCATGGTGCTCTGCCAGGACAGGTTTCCCTGAAGGAAGCTGCTCACACTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 72 bp AGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTaGCCCCCACAGCACCAGCTTCACCAACACATGGTC +
Preference number: 3 (lower is better)
Translates to: REEQASRCHSSE*PPQHQLHQHMV
Trigger: GACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGGCGAGCTCTGGGAGATaGGAGAGCGGCAACATAATG +
Preference number: 3 (lower is better)
Translates to: VVREEQASRCHSSEWPPQASSGR*ESGNIM
Trigger: CATTATGTTGCCGCTCTCCAATCTCCCAGAGCTCGC...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAAGGAGGGAGAATCACTaGAGCCCAAGAGTTCAAGGC +
Preference number: 3 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQRRENH*SPRVQG
Trigger: GCCTTGAACTCTTGGGCTCAAGTGATTCTCCCTCCT...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGCAGAGTTGACCACTTaGTGGAAATGTCTCAGGGCC +
Preference number: 3 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQAELTT*WKCLRA
Trigger: GGCCCTGAGACATTTCCACAAAGTGGTCAACTCTGC...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGGGAGAAAAAGTAACATaGCCCCTCACTCCCACTCAC +
Preference number: 3 (lower is better)
Translates to: VVREEQASRCHSSEWPPQGEKVT*PLTPTH
Trigger: GTGAGTGGGAGTGAGGGGCAATGTTACTTTTTCTCC...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGGATGCAAGGCAGAGTaGACCACTTTGTGGAAATGT +
Preference number: 3 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQGCKAE*TTLWKC
Trigger: ACATTTCCACAAAGTGGTCAACTCTGCCTTGCATCC...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGACTGTGTGTCACTCTCTaGGGCTGGGCCTATGAACAT +
Preference number: 3 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGLCVTL*GWAYEH
Trigger: ATGTTCATAGGCCCAGCCCAAGAGAGTGACACACAG...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGCAGAGTTGACCACTTaGTGGAAATGTCTCAGGGCC +
Preference number: 3 (lower is better)
Translates to: PTAPASPTHGPGTARRSEAELTT*WKCLRA
Trigger: GGCCCTGAGACATTTCCACAAAGTGGTCAACTCTGC...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGGGATGCAAGGCAGAGTaGACCACTTTGTGGAAATGT +
Preference number: 3 (lower is better)
Translates to: VVREEQASRCHSSEWPPQGCKAE*TTLWKC
Trigger: ACATTTCCACAAAGTGGTCAACTCTGCCTTGCATCC...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 72 bp CCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATaGTGGCAAAGGCTCACCAGGAGTCTCAGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: PQAQPWSAMWFS*WQRLTRSLSLK
Trigger: CTTCAAGCTGAGACTCCTGGTGAGCCTTTGCCACCATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 72 bp TCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTaGTTTTCATGGTGGCAAAGGCTCACCAGGAGTCTC +
Preference number: 3 (lower is better)
Translates to: SSVPQAQPWSAM*FSWWQRLTRSL
Trigger: GAGACTCCTGGTGAGCCTTTGCCACCATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGACCAGGAGTCTCAGCTaGAAGGATGGTGACAATCTC +
Preference number: 3 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLTRSLS*KDGDNL
Trigger: GAGATTGTCACCATCCTTCAAGCTGAGACTCCTGGT...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR-3UTR CAA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGTGCTTAGCACAGTGCTaGGCACAGGATTGTTCTCAG +
Preference number: 3 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLCLAQC*AQDCSQ
Trigger: CTGAGAACAATCCTGTGCCAAGCACTGTGCTAAGCA...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR TCA 72 bp CGCTGCCCAGCTTCAGACATGTGTGGTGACCAAACCTaGTCCCTGTTGACTCACACAGATGTGGCATGTAAG +
Preference number: 3 (lower is better)
Translates to: RCPASDMCGDQT*SLLTHTDVACK
Trigger: CTTACATGCCACATCTGTGTGAGTCAACAGGGATCAGGTTTGGTCACCACACATGTCTGAAGCTGGGCAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR TCA 72 bp ACAGAGCAGACGCTGCCCAGCTTCAGACATGTGTGGTaGCCAAACCTGATCCCTGTTGACTCACACAGATGT +
Preference number: 3 (lower is better)
Translates to: TEQTLPSFRHVW*PNLIPVDSHRC
Trigger: ACATCTGTGTGAGTCAACAGGGATCAGGTTTGGTCACCACACATGTCTGAAGCTGGGCAGCGTCTGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAACTTTATCTTACCACCTaGTGCACACCTCAAAATCTC +
Preference number: 3 (lower is better)
Translates to: PTAPASPTHGPGTARRSELYLTT*CTPQNL
Trigger: GAGATTTTGAGGTGTGCACAAGGTGGTAAGATAAAG...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGCTGTGTGTCACTCTCTaGGGCTGGGCCTATGAACAT +
Preference number: 3 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMLCVTL*GWAYEH
Trigger: ATGTTCATAGGCCCAGCCCAAGAGAGTGACACACAG...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR GCA 72 bp CTGTTTGCCAGGACGAAGACATGGAGAGGGCAGATCTaGCCTTTAGGCAACCTTAGTTCGTTATCTGCAACC +
Preference number: 3 (lower is better)
Translates to: LFARTKTWRGQI*PLGNLSSLSAT
Trigger: GGTTGCAGATAACGAACTAAGGTTGCCTAAAGGGCAGATCTGCCCTCTCCATGTCTTCGTCCTGGCAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGGGAGAAAAAGTAACATaGCCCCTCACTCCCACTCAC +
Preference number: 3 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMGEKVT*PLTPTH
Trigger: GTGAGTGGGAGTGAGGGGCAATGTTACTTTTTCTCC...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR TCA 72 bp CTTCAGACATGTGTGGTGACCAAACCTGATCCCTGTTaGCTCACACAGATGTGGCATGTAAGGTGGAGCGTT +
Preference number: 3 (lower is better)
Translates to: LQTCVVTKPDPC*LTQMWHVRWSV
Trigger: AACGCTCCACCTTACATGCCACATCTGTGTGAGTCAACAGGGATCAGGTTTGGTCACCACACATGTCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR GCA 72 bp ATTGAGCAGCTAAGTGCCAGGTGCTGTTCCCTTTACTaGAGACGGAGCAGTGAACAAAACAGCAAGGTTCTG +
Preference number: 3 (lower is better)
Translates to: IEQLSARCCSLY*RRSSEQNSKVL
Trigger: CAGAACCTTGCTGTTTTGTTCACTGCTCCGTCTGCAGTAAAGGGAACAGCACCTGGCACTTAGCTGCTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR TCA 72 bp TGCTTCCACCTACTCATCCATCCACGTAACATGTATTaGGCAGCTAAGTGCCAGGTGCTGTTCCCTTTACTG +
Preference number: 3 (lower is better)
Translates to: CFHLLIHPRNMY*AAKCQVLFPLL
Trigger: CAGTAAAGGGAACAGCACCTGGCACTTAGCTGCTCAATACATGTTACGTGGATGGATGAGTAGGTGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR GCA 72 bp CTTTATAAAGAAGGTGATTCTTGCCAGCTGCAGTGGTaGAACTATAGTTCGTTCCAGCTACTCGGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: LYKEGDSCQLQW*NYSSFQLLGRL
Trigger: CAGCCTCCCGAGTAGCTGGAACGAACTATAGTTGCACCACTGCAGCTGGCAAGAATCACCTTCTTTATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACGCGAGCTCTGGGAGATaGGAGAGCGGCAACATAATG +
Preference number: 3 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNASSGR*ESGNIM
Trigger: CATTATGTTGCCGCTCTCCAATCTCCCAGAGCTCGC...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR TCA 72 bp AGTGCTTGGCACAGGATTGTTCTCAGTGTAGGTTGCTaGATGGATGAATGCTTCCACCTACTCATCCATCCA +
Preference number: 3 (lower is better)
Translates to: SAWHRIVLSVGC*MDECFHLLIHP
Trigger: TGGATGGATGAGTAGGTGGAAGCATTCATCCATTCAGCAACCTACACTGAGAACAATCCTGTGCCAAGCACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR CCA 72 bp AAAGTTTTAGGATGCAAGGCAGAGTTGACCACTTTGTaGAAATGTCTCAGGGCCAGCACTGTGTGTCACTCT +
Preference number: 3 (lower is better)
Translates to: KVLGCKAELTTL*KCLRASTVCHS
Trigger: AGAGTGACACACAGTGCTGGCCCTGAGACATTTCCACAAAGTGGTCAACTCTGCCTTGCATCCTAAAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR-3UTR CAA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGGCAACAGCATTAGTTTaGAAGCTCATATGCCCTTTA +
Preference number: 3 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMATALV*KLICPL
Trigger: TAAAGGGCATATGAGCTTCAAAACTAATGCTGTTGC...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CCA 72 bp ACTGCAGACGGAGCAGTGAACAAAACAGCAAGGTTCTaGTCTCTTGTTAACTATGTTCTAATGCGGGAGAAC +
Preference number: 3 (lower is better)
Translates to: TADGAVNKTARF*SLVNYVLMREN
Trigger: GTTCTCCCGCATTAGAACATAGTTAACAAGAGACCAGAACCTTGCTGTTTTGTTCACTGCTCCGTCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR CCA 72 bp GCCCAGCCCCTCTTCTCTGTTCCTTTATTAGCTAAGTaGCCCTGGGTAAGCCATATAATCTTTCAAACAATG +
Preference number: 3 (lower is better)
Translates to: AQPLFSVPLLAK*PWVSHIIFQTM
Trigger: CATTGTTTGAAAGATTATATGGCTTACCCAGGGCCACTTAGCTAATAAAGGAACAGAGAAGAGGGGCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR GCA 72 bp GCTTTGTCTTGTTTTGTTTCCTTATGCTTAGCACAGTaGTTGGCACAGGATTGTTCTCAGTGTAGGTTGCTG +
Preference number: 3 (lower is better)
Translates to: ALSCFVSLCLAQ*LAQDCSQCRLL
Trigger: CAGCAACCTACACTGAGAACAATCCTGTGCCAAGCACTGTGCTAAGCATAAGGAAACAAAACAAGACAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR CCA 72 bp CCCCTCTTCTCTGTTCCTTTATTAGCTAAGTGGCCCTaGGTAAGCCATATAATCTTTCAAACAATGGGATTA +
Preference number: 3 (lower is better)
Translates to: PLFSVPLLAKWP*VSHIIFQTMGL
Trigger: TAATCCCATTGTTTGAAAGATTATATGGCTTACCCAGGGCCACTTAGCTAATAAAGGAACAGAGAAGAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR GCA 72 bp TTCATGTATGCAACAGCATTAGTTTTGAAGCTCATATaGCCTTTATCTTACCACCTTGTGCACACCTCAAAA +
Preference number: 3 (lower is better)
Translates to: FMYATALVLKLI*PLSYHLVHTSK
Trigger: TTTTGAGGTGTGCACAAGGTGGTAAGATAAAGGGCATATGAGCTTCAAAACTAATGCTGTTGCATACATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGGCTCCGGCGGACGCTaGCATCGTCCAGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQGSGGR*HRPATA
Trigger: TGCAGTGGCTGGACGATGGCAGCGTCCGCCGGAGCC...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGACCATCGTCCAGCCACTaGAGTCGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGPSSSH*SRRRRR
Trigger: GCGGCGGCGGCGGCGACTGCAGTGGCTGGACGATGG...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAACCAGCGCCGGCTGTCTaGGGCTGCAATCACCGCCCC +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSEPAPAV*GCNHRP
Trigger: GGGGCGGTGATTGCAGCCCCAGACAGCCGGCGCTGG...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCAGAGCACCATGCTaGCAGCTGCCCTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSEGRAPC*QLPLPG
Trigger: CCCAGGCAAGGGCAGCTGCCAGCATGGTGCTCTGCC...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAACACCGCAAGAAGAAGTaGAGGCTCTTGCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQHRKKK*RLLLSG
Trigger: CCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTG...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGGGCACTGACAGAGTTTaGGGTGTCTGGTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VVREEQASRCHSSEWPPQGTDRV*GVWLGR
Trigger: CCTGCCCAACCAGACACCTCAAACTCTGTCAGTGCC...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAACTGGTGAGGATTCTCTaGCAGAATGCCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQLVRIL*QNARAL
Trigger: CAGTGCCCTGGCATTCTGGCAGAGAATCCTCACCAG...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGACCTGGCAGAGCACCATaGTGGCAGCTGCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGPGRAP*WQLPLP
Trigger: AGGCAAGGGCAGCTGCCAGCATGGTGCTCTGCCAGG...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAACACAGAGCAGACGCTaGCCAGCTTCAGACATGTGT +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQTQSRR*PASDMC
Trigger: ACACATGTCTGAAGCTGGGCAGCGTCTGCTCTGTGT...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGCCAGCGCCGGCTGTCTaGGGCTGCAATCACCGCCCC +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMPAPAV*GCNHRP
Trigger: GGGGCGGTGATTGCAGCCCCAGACAGCCGGCGCTGG...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAGAAGAGGTCCTGCCCTaGGAGGCTCATCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGEEVLP*EAHLSV
Trigger: CACACTGAGATGAGCCTCTCAGGGCAGGACCTCTTC...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAACCACGTAACATGTATTaGGCAGCTAAGTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQPRNMY*AAKCQV
Trigger: CACCTGGCACTTAGCTGCTCAATACATGTTACGTGG...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR GCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGGGCTCCGGCGGACGCTaGCATCGTCCAGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMGSGGR*HRPATA
Trigger: TGCAGTGGCTGGACGATGGCAGCGTCCGCCGGAGCC...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGATTCTCTGCCAGAATaGCAGGGCACTGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQDSLPE*QGTDRV
Trigger: AACTCTGTCAGTGCCCTGGCATTCTGGCAGAGAATC...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAATTCAGACATGTGTGGTaGCCAAACCTGATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQFRHVW*PNLIPV
Trigger: AACAGGGATCAGGTTTGGTCACCACACATGTCTGAA...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGATGCAAGGCAGAGTTaGCCACTTTGTGGAAATGTC +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQDARQS*PLCGNV
Trigger: GACATTTCCACAAAGTGGTCAACTCTGCCTTGCATC...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGTACTTCCTTTTGGTGTaGGAGGCCACAGGGCATAGT +
Preference number: 4 (lower is better)
Translates to: VVREEQASRCHSSEWPPQYFLLV*EATGHS
Trigger: ACTATGCCCTGTGGCCTCTCACACCAAAAGGAAGTA...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAAGCTTCACCAACACATaGTCCCGGCACCGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGSFTNT*SRHRKK
Trigger: CTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCT...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAATGTCATTCGAGTGAGTaGCCCCCACAGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSECHSSE*PPQHQL
Trigger: AAGCTGGTGCTGTGGGGGCCACTCACTCGAATGACA...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGCAGGGAAACCTGTCCTaGCAGAGCACCATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLQGNLS*QSTMLA
Trigger: TGCCAGCATGGTGCTCTGCCAGGACAGGTTTCCCTG...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGGCCAGGACGAAGACATaGAGAGGGCAGATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLARTKT*RGQICP
Trigger: AGGGCAGATCTGCCCTCTCCATGTCTTCGTCCTGGC...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAACAACTGTGTCCAGAATaGAGTGACCTTCGGCATTTA +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQQLCPE*SDLRHL
Trigger: TAAATGCCGAAGGTCACTTCATTCTGGACACAGTTG...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAAGGCTCATCTCAGTGTaGGCAGCTTCCTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSERLISV*AASFRE
Trigger: TTCCCTGAAGGAAGCTGCTCACACTGAGATGAGCCT...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGCCTGGCAGAGCACCATaGTGGCAGCTGCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMPGRAP*WQLPLP
Trigger: AGGCAAGGGCAGCTGCCAGCATGGTGCTCTGCCAGG...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGCTTGGGAAGAGGTCCTaGCCTGAGAGGCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLLGKRS*PERLIS
Trigger: TGAGATGAGCCTCTCAGGGCAGGACCTCTTCCCAAG...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAATTTGAGGTGTCTGGTTaGGCAGGAGGCCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSEFEVSG*AGGQEV
Trigger: GACTTCTTGGCCTCCTGCCCAACCAGACACCTCAAA...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAATGTGGTGACCAAACCTaGTCCCTGTTGACTCACACA +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSECGDQT*SLLTHT
Trigger: TGTGTGAGTCAACAGGGATCAGGTTTGGTCACCACA...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAACCAGGAGTCTCAGCTTaGAGGATGGTGACAATCTCA +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSEPGVSA*RMVTIS
Trigger: TGAGATTGTCACCATCCTTCAAGCTGAGACTCCTGG...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGACCAGGAGTCTCAGCTTaGAGGATGGTGACAATCTCA +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGPGVSA*RMVTIS
Trigger: TGAGATTGTCACCATCCTTCAAGCTGAGACTCCTGG...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACCCATCGTCCAGCCACTaGAGTCGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNPSSSH*SRRRRR
Trigger: GCGGCGGCGGCGGCGACTGCAGTGGCTGGACGATGG...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGACACAGAGCAGACGCTaGCCAGCTTCAGACATGTGT +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLTQSRR*PASDMC
Trigger: ACACATGTCTGAAGCTGGGCAGCGTCTGCTCTGTGT...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR GCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGATGGAGAGGGCAGATCTaGCCTTTAGGCAACCTTAGT +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGWRGQI*PLGNLS
Trigger: ACTAAGGTTGCCTAAAGGGCAGATCTGCCCTCTCCA...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAGCTCTCAGACATCTGTaGCTACCACCTAGACTACAC +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGALRHL*LPPRLH
Trigger: GTGTAGTCTAGGTGGTAGGCACAGATGTCTGAGAGC...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGGTCACTCTCTTGGGCTaGGCCTATGAACATGGAAGG +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLVTLLG*AYEHGR
Trigger: CCTTCCATGTTCATAGGCCCAGCCCAAGAGAGTGAC...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGATGTGTGTCACTCTCTTaGGCTGGGCCTATGAACATG +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGCVSLS*AGPMNM
Trigger: CATGTTCATAGGCCCAGCCCAAGAGAGTGACACACA...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAGCTATGTGGTTTTCATaGTGGCAAAGGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGAMWFS*WQRLTR
Trigger: CCTGGTGAGCCTTTGCCACCATGAAAACCACATAGC...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGACCTCAAGCACAGCCCTaGTCAGCTATGTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGPQAQP*SAMWFS
Trigger: TGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGG...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAACCTCAAGCACAGCCCTaGTCAGCTATGTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSEPQAQP*SAMWFS
Trigger: TGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGG...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGAAACCACAGGAATATTaGCAGAAGGCATGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VVREEQASRCHSSEWPPQKPQEY*QKACFR
Trigger: CCTGAAGCATGCCTTCTGCCAATATTCCTGTGGTTT...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAACAAATAAATGGTACTaGTACTGTGCTAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQTNKWY*YCAKGH
Trigger: GTGGCCTTTAGCACAGTATCAGTACCATTTATTTGT...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAACACGGACGGCATTTTTaGAGAAAAGAAGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSEHGRHF*RKEGRC
Trigger: ACACCTGCCTTCTTTTCTTCAAAAATGCCGTCCGTG...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGCAGGGAAACCTGTCCTaGCAGAGCACCATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMQGNLS*QSTMLA
Trigger: TGCCAGCATGGTGCTCTGCCAGGACAGGTTTCCCTG...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGGCCAGGACGAAGACATaGAGAGGGCAGATCTGCCCT +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMARTKT*RGQICP
Trigger: AGGGCAGATCTGCCCTCTCCATGTCTTCGTCCTGGC...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGCTTGGGCTGGGCCTATaGACATGGAAGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ECSHTELAHNFKTTLFARLGLGL*TWKAAG
Trigger: CCCTGCTGCCTTCCATGTTCATAGGCCCAGCCCAAG...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAAACTCTCTGATGTACTaGAGCCAGTGTAATCCCGTT +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSENSLMY*SQCNPV
Trigger: AACGGGATTACACTGGCTGCAGTACATCAGAGAGTT...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR GCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGCTTGGGAAGAGGTCCTaGCCTGAGAGGCTCATCTCA +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMLGKRS*PERLIS
Trigger: TGAGATGAGCCTCTCAGGGCAGGACCTCTTCCCAAG...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAACTTTGTGAATTCTGTTaGAACTCAGCCTTCAAACAT +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQLCEFC*NSAFKH
Trigger: ATGTTTGAAGGCTGAGTTCCAACAGAATTCACAAAG...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGATGTGGTTTTCATGGTaGCAAAGGCTCACCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLMWFSW*QRLTRS
Trigger: ACTCCTGGTGAGCCTTTGCCACCATGAAAACCACAT...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGAAAAGCGAAAGAAGGTaGTTCTCTAGAGAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLKSERR*FSRERA
Trigger: AGCTCGCTCTCTAGAGAATCACCTTCTTTCGCTTTT...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGGACTGTAAGGAAACATaGCACAGGCCTGTCTACAAT +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLDCKET*HRPVYN
Trigger: ATTGTAGACAGGCCTGTGTCATGTTTCCTTACAGTC...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGGAAGAGGTCCTGCCCTaGGAGGCTCATCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: ECSHTELAHNFKTTLFAREEVLP*EAHLSV
Trigger: CACACTGAGATGAGCCTCTCAGGGCAGGACCTCTTC...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGGTTTTGAAGCTCATATaGCCTTTATCTTACCACCTT +
Preference number: 4 (lower is better)
Translates to: VVREEQASRCHSSEWPPQVLKLI*PLSYHL
Trigger: AAGGTGGTAAGATAAAGGGCATATGAGCTTCAAAAC...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAGTAATGCCTTTTGAGTaGTCCCATACAGAATTAGCG +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGVMPFE*SHTELA
Trigger: CGCTAATTCTGTATGGGAGCACTCAAAAGGCATTAC...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAGAAAGAAATGCAAAGTaGCTGGCTCACACCAAGTAT +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGERNAK*LAHTKY
Trigger: ATACTTGGTGTGAGCCAGGCACTTTGCATTTCTTTC...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR GCA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGGAGAAAACTGCAACTaGATTTCAGCACATTTATTT +
Preference number: 4 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQGENCN*ISAHLF
Trigger: AAATAAATGTGCTGAAATGCAGTTGCAGTTTTCTCC...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGTTTGAGGTGTCTGGTTaGGCAGGAGGCCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMFEVSG*AGGQEV
Trigger: GACTTCTTGGCCTCCTGCCCAACCAGACACCTCAAA...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAAACATCCCCAGAAGATaGCAAGATGAGAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSENIPRR*QDEKKK
Trigger: CTTTTTCTTCTCATCTTGTCATCTTCTGGGGATGTT...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGCACCGCAAGAAGAAGTaGAGGCTCTTGCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ECSHTELAHNFKTTLFARHRKKK*RLLLSG
Trigger: CCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTG...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAACTAAGTAATGCCTTTTaGGTGCTCCCATACAGAATT +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSELSNAF*VLPYRI
Trigger: AATTCTGTATGGGAGCACTCAAAAGGCATTACTTAG...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGACTAAGTAATGCCTTTTaGGTGCTCCCATACAGAATT +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGLSNAF*VLPYRI
Trigger: AATTCTGTATGGGAGCACTCAAAAGGCATTACTTAG...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGTTATGCTTAGCACAGTaGTTGGCACAGGATTGTTCT +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLLCLAQ*LAQDCS
Trigger: AGAACAATCCTGTGCCAAGCACTGTGCTAAGCATAA...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAATGTGGCATGTAAGGTaGAGCGTTACAAGAATAACA +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSEMWHVR*SVTRIT
Trigger: TGTTATTCTTGTAACGCTCCACCTTACATGCCACAT...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGGCTATGTGGTTTTCATaGTGGCAAAGGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMAMWFS*WQRLTR
Trigger: CCTGGTGAGCCTTTGCCACCATGAAAACCACATAGC...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGAGCTTCACCAACACATaGTCCCGGCACCGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ECSHTELAHNFKTTLFARSFTNT*SRHRKK
Trigger: CTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCT...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGCCTTTATTAGCTAAGTaGCCCTGGGTAAGCCATATA +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLPLLAK*PWVSHI
Trigger: TATATGGCTTACCCAGGGCCACTTAGCTAATAAAGG...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGCTGTGCATATATGACTaGGCCCGACACAGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMLCIYD*ARHSSV
Trigger: GACACTACTGTGTCGGGCCCAGTCATATATGCACAG...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392121.7
3UTR CAA 72 bp CTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTaGTTTTGTTTCCTTATGCTTAGCACAGTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LHPVASSLRSFV*FCFLMLSTVLG
Trigger: GCCAAGCACTGTGCTAAGCATAAGGAAACAAAACAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAAACATAAGTGTTGAATaGTCTTCACCACACTTTCCA +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGNISVE*SSPHFP
Trigger: TGGAAAGTGTGGTGAAGATCATTCAACACTTATGTT...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGAAAGAAGGTGATTCTTaGCAGCTGCAGTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMKEGDS*QLQWCN
Trigger: GTTGCACCACTGCAGCTGGCAAGAATCACCTTCTTT...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAATATCTTACCACCTTGTaGACACCTCAAAATCTCAAT +
Preference number: 4 (lower is better)
Translates to: PTAPASPTHGPGTARRSEYLTTL*TPQNLN
Trigger: ATTGAGATTTTGAGGTGTGCACAAGGTGGTAAGATA...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGACTTTGTGAATTCTGTTaGAACTCAGCCTTCAAACAT +
Preference number: 4 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGLCEFC*NSAFKH
Trigger: ATGTTTGAAGGCTGAGTTCCAACAGAATTCACAAAG...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
3UTR CAA 72 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTaGAGGAGCTTTGTCTTGTTTTGTTTCCTTATGCTT +
Preference number: 4 (lower is better)
Translates to: HVTCHLHPVASS*RSFVLFCFLML
Trigger: AAGCATAAGGAAACAAAACAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACATGACTGGGCCCTGGTaGGATCCAGAAGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNMTGPW*DPEGRL
Trigger: GAGTCTGCCTTCTGGATCTCACCAGGGCCCAGTCAT...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGAAAAGCGAAAGAAGGTaGTTCTCTAGAGAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMKSERR*FSRERA
Trigger: AGCTCGCTCTCTAGAGAATCACCTTCTTTCGCTTTT...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACGGCACTGACAGAGTTTaGGGTGTCTGGTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNGTDRV*GVWLGR
Trigger: CCTGCCCAACCAGACACCTCAAACTCTGTCAGTGCC...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGATTAGGAACAAGGCTGTaGATCAAACAGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRLGTRL*IKQRPQ
Trigger: CTGGGGCCGCTGTTTGATCCACAGCCTTGTTCCTAA...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGTTTGGTACTTCCTTTTaGTGTGAGAGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: ECSHTELAHNFKTTLFARFGTSF*CERPQG
Trigger: GCCCTGTGGCCTCTCACACCAAAAGGAAGTACCAAA...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGAAACCTGATCCCTGTTaGCTCACACAGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: ECSHTELAHNFKTTLFARKPDPC*LTQMWH
Trigger: ATGCCACATCTGTGTGAGTCAACAGGGATCAGGTTT...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGCTCAGTGTAGGTTGCTaGATGGATGAATGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ECSHTELAHNFKTTLFARLSVGC*MDECFH
Trigger: GTGGAAGCATTCATCCATTCAGCAACCTACACTGAG...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR GCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGATGGAGAGGGCAGATCTaGCCTTTAGGCAACCTTAGT +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRWRGQI*PLGNLS
Trigger: ACTAAGGTTGCCTAAAGGGCAGATCTGCCCTCTCCA...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGATGTGTGTCACTCTCTTaGGCTGGGCCTATGAACATG +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRCVSLS*AGPMNM
Trigger: CATGTTCATAGGCCCAGCCCAAGAGAGTGACACACA...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAGAGTTGACCACTTTGTaGAAATGTCTCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRELTTL*KCLRAS
Trigger: GCTGGCCCTGAGACATTTCCACAAAGTGGTCAACTC...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACTGTCATTCGAGTGAGTaGCCCCCACAGCACCAGCTT +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNCHSSE*PPQHQL
Trigger: AAGCTGGTGCTGTGGGGGCCACTCACTCGAATGACA...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGACAGCTCCTAAGGGACTaGGAGAAAACTGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRQLLRD*EKTATA
Trigger: TGCAGTTGCAGTTTTCTCCCAGTCCCTTAGGAGCTG...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR CAA 72 bp CAAAAAGTTTTAGGATGCAAGGCAGAGTTGACCACTTaGTGGAAATGTCTCAGGGCCAGCACTGTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: QKVLGCKAELTT*WKCLRASTVCH
Trigger: GTGACACACAGTGCTGGCCCTGAGACATTTCCACAAAGTGGTCAACTCTGCCTTGCATCCTAAAACTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGGTTTTATTCCCTTTGTaGATTCTGTTGGAACTCAGC +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMVLFPL*ILLELS
Trigger: GCTGAGTTCCAACAGAATTCACAAAGGGAATAAAAC...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGCTGTTGAGAAAGCAGTaGAAAAACAATGCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMLLRKQ*KNNAPF
Trigger: AAAAGGGGCATTGTTTTTTCACTGCTTTCTCAACAG...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACAGGCTCATCTCAGTGTaGGCAGCTTCCTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNRLISV*AASFRE
Trigger: TTCCCTGAAGGAAGCTGCTCACACTGAGATGAGCCT...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGACTGTGGCAAGCTCCTTaGGGAGCTTTGTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRLWQAP*GALSCF
Trigger: AAAACAAGACAAAGCTCCTCAAGGAGCTTGCCACAG...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR GCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAAAAGAAGGTGATTCTTaGCAGCTGCAGTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRKEGDS*QLQWCN
Trigger: GTTGCACCACTGCAGCTGGCAAGAATCACCTTCTTT...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
3UTR CAA 72 bp ATAGATGCCCAAAAAGTTTTAGGATGCAAGGCAGAGTaGACCACTTTGTGGAAATGTCTCAGGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: IDAQKVLGCKAE*TTLWKCLRAST
Trigger: AGTGCTGGCCCTGAGACATTTCCACAAAGTGGTCAACTCTGCCTTGCATCCTAAAACTTTTTGGGCATCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACCTGCAGACGGAGCAGTaGACAAAACAGCAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNLQTEQ*TKQQGS
Trigger: AGAACCTTGCTGTTTTGTTCACTGCTCCGTCTGCAG...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR GCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACGATTCTCTGCCAGAATaGCAGGGCACTGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNDSLPE*QGTDRV
Trigger: AACTCTGTCAGTGCCCTGGCATTCTGGCAGAGAATC...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAGAAATGCAAAGTGCCTaGCTCACACCAAGTATTTGG +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTREMQSA*LTPSIW
Trigger: CCAAATACTTGGTGTGAGCCAGGCACTTTGCATTTC...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACAAACCTGATCCCTGTTaGCTCACACAGATGTGGCAT +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNKPDPC*LTQMWH
Trigger: ATGCCACATCTGTGTGAGTCAACAGGGATCAGGTTT...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACTTCAGACATGTGTGGTaGCCAAACCTGATCCCTGTT +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNFRHVW*PNLIPV
Trigger: AACAGGGATCAGGTTTGGTCACCACACATGTCTGAA...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGCTGTTGAGAAAGCAGTaGAAAAACAATGCCCCTTTT +
Preference number: 4 (lower is better)
Translates to: ECSHTELAHNFKTTLFARLLRKQ*KNNAPF
Trigger: AAAAGGGGCATTGTTTTTTCACTGCTTTCTCAACAG...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACATGTGGTTTTCATGGTaGCAAAGGCTCACCAGGAGT +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNMWFSW*QRLTRS
Trigger: ACTCCTGGTGAGCCTTTGCCACCATGAAAACCACAT...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAACAAATAAATGGTACTaGTACTGTGCTAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRTNKWY*YCAKGH
Trigger: GTGGCCTTTAGCACAGTATCAGTACCATTTATTTGT...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR TCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACCAACTGTGTCCAGAATaGAGTGACCTTCGGCATTTA +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNQLCPE*SDLRHL
Trigger: TAAATGCCGAAGGTCACTTCATTCTGGACACAGTTG...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAGTTTTATTCCCTTTGTaGATTCTGTTGGAACTCAGC +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRVLFPL*ILLELS
Trigger: GCTGAGTTCCAACAGAATTCACAAAGGGAATAAAAC...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR GCA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAGTTTTGAAGCTCATATaGCCTTTATCTTACCACCTT +
Preference number: 4 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRVLKLI*PLSYHL
Trigger: AAGGTGGTAAGATAAAGGGCATATGAGCTTCAAAAC...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR GCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACGTAATGCCTTTTGAGTaGTCCCATACAGAATTAGCG +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNVMPFE*SHTELA
Trigger: CGCTAATTCTGTATGGGAGCACTCAAAAGGCATTAC...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR TCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACAACATCCCCAGAAGATaGCAAGATGAGAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNNIPRR*QDEKKK
Trigger: CTTTTTCTTCTCATCTTGTCATCTTCTGGGGATGTT...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACCAAAAAGTTTTAGGATaGAAGGCAGAGTTGACCACT +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNQKVLG*KAELTT
Trigger: AGTGGTCAACTCTGCCTTGCATCCTAAAACTTTTTG...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR GCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACTGTTTTGTTTCCTTATaGTTAGCACAGTGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNCFVSL*LAQCLA
Trigger: TGCCAAGCACTGTGCTAAGCATAAGGAAACAAAACA...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CCA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACTTAGCTAAGTGGCCCTaGGTAAGCCATATAATCTTT +
Preference number: 4 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNLAKWP*VSHIIF
Trigger: AAAGATTATATGGCTTACCCAGGGCCACTTAGCTAA...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS GCA 90 bp CCGGCTGTCTGGGGCTGCAATCACCGCCCCGGCTCCGGCGGACGCTaGCATCGTCCAGCCACTGCAGTCGCCGCCGCCGCCGCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: PAVWGCNHRPGSGGR*HRPATAVAAAAAAS
Trigger: GGACGCGGCGGCGGCGGCGGCGACTGCAGTGGCTGGACGATGGCAGCGTCCGCCGGAGCCGGGGCGGTGATTGCAGCCCCAGACAGCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359523.7
ENST00000392121.7
ENST00000448405.5
ENST00000464954.1
ENST00000465787.5
CDS CCA 90 bp CCCAAGCGCCGCCGCCAGCACCGACCACAGCCAGCGCCGGCTGTCTaGGGCTGCAATCACCGCCCCGGCTCCGGCGGACGCTGCCATCGT +
Preference number: 5 (lower is better)
Translates to: PKRRRQHRPQPAPAV*GCNHRPGSGGRCHR
Trigger: ACGATGGCAGCGTCCGCCGGAGCCGGGGCGGTGATTGCAGCCCCAGACAGCCGGCGCTGGCTGTGGTCGGTGCTGGCGGCGGCGCTTGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359523.7
ENST00000392121.7
ENST00000448405.5
ENST00000464954.1
ENST00000465787.5
CDS GCA 90 bp CGAAGCCTCAGCCCCACTCCGGCCCTCGCTGTCCGCTCATTGGCCTaGCCGCACCCTTTTAAGGACGCGATTGGAGAGTCAGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: RSLSPTPALAVRSLA*PHPFKDAIGESGCP
Trigger: TGGACAGCCTGACTCTCCAATCGCGTCCTTAAAAGGGTGCGGGCAGGCCAATGAGCGGACAGCGAGGGCCGGAGTGGGGCTGAGGCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS CCA 90 bp TGCACCGAAGCCTCAGCCCCACTCCGGCCCTCGCTGTCCGCTCATTaGCCTGCCCGCACCCTTTTAAGGACGCGATTGGAGAGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: CTEASAPLRPSLSAH*PARTLLRTRLESQA
Trigger: AGCCTGACTCTCCAATCGCGTCCTTAAAAGGGTGCGGGCAGGCCAATGAGCGGACAGCGAGGGCCGGAGTGGGGCTGAGGCTTCGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS-3UTR CAA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGTGGGTGTGCAGGGCTaGGGAAGAGGTCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQVGVQG*GRGPAL
Trigger: CAGGGCAGGACCTCTTCCCAAGCCCTGCACACCCAC...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGGTGGGTGTGCAGGGCTaGGGAAGAGGTCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLVGVQG*GRGPAL
Trigger: CAGGGCAGGACCTCTTCCCAAGCCCTGCACACCCAC...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CAA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAACTGTGTGTCACTCTCTaGGGCTGGGCCTATGAACAT +
Preference number: 5 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQLCVTL*GWAYEH
Trigger: ATGTTCATAGGCCCAGCCCAAGAGAGTGACACACAG...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGAGGAGGGAGAATCACTaGAGCCCAAGAGTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: VVREEQASRCHSSEWPPQRRENH*SPRVQG
Trigger: GCCTTGAACTCTTGGGCTCAAGTGATTCTCCCTCCT...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAACCAGGAGTCTCAGCTaGAAGGATGGTGACAATCTC +
Preference number: 5 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQTRSLS*KDGDNL
Trigger: GAGATTGTCACCATCCTTCAAGCTGAGACTCCTGGT...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGCGAGCTCTGGGAGATaGGAGAGCGGCAACATAATG +
Preference number: 5 (lower is better)
Translates to: PTAPASPTHGPGTARRSEASSGR*ESGNIM
Trigger: CATTATGTTGCCGCTCTCCAATCTCCCAGAGCTCGC...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGACCAGGAGTCTCAGCTaGAAGGATGGTGACAATCTC +
Preference number: 5 (lower is better)
Translates to: VVREEQASRCHSSEWPPQTRSLS*KDGDNL
Trigger: GAGATTGTCACCATCCTTCAAGCTGAGACTCCTGGT...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp AGTGAGTGGCCCCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAACAAACCACAGGAATATaGGCAGAAGGCATGCTTCAG +
Preference number: 5 (lower is better)
Translates to: SEWPPQHQLHQHMVPAPQQTTGI*AEGMLQ
Trigger: CTGAAGCATGCCTTCTGCCAATATTCCTGTGGTTTG...TTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGGGGCCACTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS CCA 90 bp GTCCCGTGGTCCTCTTCATTGTCTCTCCTCGCCACAGGTCTTTGCTaGGTACTAACCTCGCCTCCGTTTCAGCTCTTCTTGTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VPWSSSLSLLATGLC*VLTSPPFQLFLFSA
Trigger: GGCAGAGAACAAGAAGAGCTGAAACGGAGGCGAGGTTAGTACCCAGCAAAGACCTGTGGCGAGGAGAGACAATGAAGAGGACCACGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS-3UTR CAA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAAGGAGGGAGAATCACTaGAGCCCAAGAGTTCAAGGC +
Preference number: 5 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGRRENH*SPRVQG
Trigger: GCCTTGAACTCTTGGGCTCAAGTGATTCTCCCTCCT...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS GCA 90 bp CCAGTCCCGTGGTCCTCTTCATTGTCTCTCCTCGCCACAGGTCTTTaGTGGGTACTAACCTCGCCTCCGTTTCAGCTCTTCTTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: PVPWSSSLSLLATGL*WVLTSPPFQLFLFS
Trigger: AGAGAACAAGAAGAGCTGAAACGGAGGCGAGGTTAGTACCCAGCAAAGACCTGTGGCGAGGAGAGACAATGAAGAGGACCACGGGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS-3UTR CAA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGATTAAGACGACCCTGTTaGCCAGGACGAAGACATGGA +
Preference number: 5 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGLRRPC*PGRRHG
Trigger: TCCATGTCTTCGTCCTGGCAAACAGGGTCGTCTTAA...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAATTAAGACGACCCTGTTaGCCAGGACGAAGACATGGA +
Preference number: 5 (lower is better)
Translates to: PTAPASPTHGPGTARRSELRRPC*PGRRHG
Trigger: TCCATGTCTTCGTCCTGGCAAACAGGGTCGTCTTAA...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp GTGGTAAGGGAGGAACAGGCCTCCAGGTGTCATTCGAGTGAGTGGCCCCCACAGCTTTATCTTACCACCTaGTGCACACCTCAAAATCTC +
Preference number: 5 (lower is better)
Translates to: VVREEQASRCHSSEWPPQLYLTT*CTPQNL
Trigger: GAGATTTTGAGGTGTGCACAAGGTGGTAAGATAAAG...CTGTGGGGGCCACTCACTCGAATGACACCTGGAGGCCTGTTCCTCCCTTACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGATGCAAGGCAGAGTaGACCACTTTGTGGAAATGT +
Preference number: 5 (lower is better)
Translates to: PTAPASPTHGPGTARRSEGCKAE*TTLWKC
Trigger: ACATTTCCACAAAGTGGTCAACTCTGCCTTGCATCC...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp ATGTGTGTCCTCTGTACCTCAAGCACAGCCCTGGTCAGCTATGTGGTTTTCATGGCGAGCTCTGGGAGATaGGAGAGCGGCAACATAATG +
Preference number: 5 (lower is better)
Translates to: MCVLCTSSTALVSYVVFMASSGR*ESGNIM
Trigger: CATTATGTTGCCGCTCTCCAATCTCCCAGAGCTCGC...CATGAAAACCACATAGCTGACCAGGGCTGTGCTTGAGGTACAGAGGACACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp CCCACAGCACCAGCTTCACCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGCAACAGCATTAGTTTaGAAGCTCATATGCCCTTTA +
Preference number: 5 (lower is better)
Translates to: PTAPASPTHGPGTARRSEATALV*KLICPL
Trigger: TAAAGGGCATATGAGCTTCAAAACTAATGCTGTTGC...TTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGGTGAAGCTGGTGCTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp CCAACACATGGTCCCGGCACCGCAAGAAGAAGTGAAGGCTCTTGCTCTCAGGGAGCTCACACCAAGTATTaGGTAACTACTAGTTACTTC +
Preference number: 5 (lower is better)
Translates to: PTHGPGTARRSEGSCSQGAHTKY*VTTSYF
Trigger: GAAGTAACTAGTAGTTACCAAATACTTGGTGTGAGC...TCCCTGAGAGCAAGAGCCTTCACTTCTTCTTGCGGTGCCGGGACCATGTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CAA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGGCAGAGTTGACCACTTaGTGGAAATGTCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: ECSHTELAHNFKTTLFARAELTT*WKCLRA
Trigger: GGCCCTGAGACATTTCCACAAAGTGGTCAACTCTGC...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGGGAGAAAAAGTAACATaGCCCCTCACTCCCACTCAC +
Preference number: 5 (lower is better)
Translates to: ECSHTELAHNFKTTLFARGEKVT*PLTPTH
Trigger: GTGAGTGGGAGTGAGGGGCAATGTTACTTTTTCTCC...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp GGGAGAACAGACAAGTGTGTACTGGGAAAGAGGGAGAGAAATAGAGTAACTAGAGCAGAGTTGACCACTTaGTGGAAATGTCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GRTDKCVLGKRERNRVTRAELTT*WKCLRA
Trigger: GGCCCTGAGACATTTCCACAAAGTGGTCAACTCTGC...TCTAGTTACTCTATTTCTCTCCCTCTTTCCCAGTACACACTTGTCTGTTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CAA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGTGCTTAGCACAGTGCTaGGCACAGGATTGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: ECSHTELAHNFKTTLFARCLAQC*AQDCSQ
Trigger: CTGAGAACAATCCTGTGCCAAGCACTGTGCTAAGCA...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CAA 90 bp CATGTCACCTGTCACCTCCACCCTGTGGCAAGCTCCTTGAGGAGCTTTGTCTTGTTTCAGCACATTTATTaGAGTAAGGAAGCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: HVTCHLHPVASSLRSFVLFQHIY*SKEAVW
Trigger: CCAAACTGCTTCCTTACTCAAATAAATGTGCTGAAA...CAAGACAAAGCTCCTCAAGGAGCTTGCCACAGGGTGGAGGTGACAGGTGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CAA 90 bp GAGTGCTCCCATACAGAATTAGCGCATAATTTTAAGACGACCCTGTTTGCCAGGACACGGACGGCATTTTaGAAGAAAAGAAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: ECSHTELAHNFKTTLFARTRTAF*KKRRQV
Trigger: CACCTGCCTTCTTTTCTTCAAAAATGCCGTCCGTGT...CCTGGCAAACAGGGTCGTCTTAAAATTATGCGCTAATTCTGTATGGGAGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359523.7
CDS-3UTR CAA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACCTTTATCTTACCACCTaGTGCACACCTCAAAATCTC +
Preference number: 5 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNLYLTT*CTPQNL
Trigger: GAGATTTTGAGGTGTGCACAAGGTGGTAAGATAAAG...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS-3UTR CAA 90 bp GAAGAAAAAGCAGCAGCTCATAATGGACTCCAAACTACAGGGAGAAAAAGTAACGCAACAGCATTAGTTTaGAAGCTCATATGCCCTTTA +
Preference number: 5 (lower is better)
Translates to: EEKAAAHNGLQTTGRKSNATALV*KLICPL
Trigger: TAAAGGGCATATGAGCTTCAAAACTAATGCTGTTGC...GTTACTTTTTCTCCCTGTAGTTTGGAGTCCATTATGAGCTGCTGCTTTTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359523.7
ENST00000392121.7
CDS GCA 72 bp TGGGGCTGCAATCACCGCCCCGGCTCCGGCGGACGCTaGCATCGTCCAGCCACTGCAGTCGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: WGCNHRPGSGGR*HRPATAVAAAA
Trigger: GGCGGCGGCGGCGACTGCAGTGGCTGGACGATGGCAGCGTCCGCCGGAGCCGGGGCGGTGATTGCAGCCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359523.7
ENST00000392121.7
ENST00000448405.5
ENST00000464954.1
ENST00000465787.5
CDS CCA 72 bp GCCTCAGCCCCACTCCGGCCCTCGCTGTCCGCTCATTaGCCTGCCCGCACCCTTTTAAGGACGCGATTGGAG +
Preference number: 6 (lower is better)
Translates to: ASAPLRPSLSAH*PARTLLRTRLE
Trigger: CTCCAATCGCGTCCTTAAAAGGGTGCGGGCAGGCCAATGAGCGGACAGCGAGGGCCGGAGTGGGGCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS CAA 90 bp CTGCACCGAAGCCTCAGCCCCACTCCGGCCCTCGCTGTCCGCTCATaGGCCTGCCCGCACCCTTTTAAGGACGCGATTGGAGAGTCAGGC +
Preference number: 6 (lower is better)
Translates to: LHRSLSPTPALAVRS*ACPHPFKDAIGESG
Trigger: GCCTGACTCTCCAATCGCGTCCTTAAAAGGGTGCGGGCAGGCCAATGAGCGGACAGCGAGGGCCGGAGTGGGGCTGAGGCTTCGGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS CAA 72 bp AGCCTCAGCCCCACTCCGGCCCTCGCTGTCCGCTCATaGGCCTGCCCGCACCCTTTTAAGGACGCGATTGGA +
Preference number: 6 (lower is better)
Translates to: SLSPTPALAVRS*ACPHPFKDAIG
Trigger: TCCAATCGCGTCCTTAAAAGGGTGCGGGCAGGCCAATGAGCGGACAGCGAGGGCCGGAGTGGGGCTGAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS CAA 90 bp TCGCTGTCCGCTCATTGGCCTGCCCGCACCCTTTTAAGGACGCGATaGGAGAGTCAGGCTGTCCATCATCCGTCCGCCGGGAAGGCCCCG +
Preference number: 6 (lower is better)
Translates to: SLSAHWPARTLLRTR*ESQAVHHPSAGKAP
Trigger: CGGGGCCTTCCCGGCGGACGGATGATGGACAGCCTGACTCTCCAATCGCGTCCTTAAAAGGGTGCGGGCAGGCCAATGAGCGGACAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS GCA 72 bp AGCCCCACTCCGGCCCTCGCTGTCCGCTCATTGGCCTaGCCGCACCCTTTTAAGGACGCGATTGGAGAGTCA +
Preference number: 6 (lower is better)
Translates to: SPTPALAVRSLA*PHPFKDAIGES
Trigger: TGACTCTCCAATCGCGTCCTTAAAAGGGTGCGGGCAGGCCAATGAGCGGACAGCGAGGGCCGGAGTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS CAA 72 bp GCTCATTGGCCTGCCCGCACCCTTTTAAGGACGCGATaGGAGAGTCAGGCTGTCCATCATCCGTCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: AHWPARTLLRTR*ESQAVHHPSAG
Trigger: CCCGGCGGACGGATGATGGACAGCCTGACTCTCCAATCGCGTCCTTAAAAGGGTGCGGGCAGGCCAATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS CAA 90 bp TCCAGTCCCGTGGTCCTCTTCATTGTCTCTCCTCGCCACAGGTCTTaGCTGGGTACTAACCTCGCCTCCGTTTCAGCTCTTCTTGTTCTC +
Preference number: 6 (lower is better)
Translates to: SSPVVLFIVSPRHRS*LGTNLASVSALLVL
Trigger: GAGAACAAGAAGAGCTGAAACGGAGGCGAGGTTAGTACCCAGCAAAGACCTGTGGCGAGGAGAGACAATGAAGAGGACCACGGGACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS GCA 72 bp TGGTCCTCTTCATTGTCTCTCCTCGCCACAGGTCTTTaGTGGGTACTAACCTCGCCTCCGTTTCAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: WSSSLSLLATGL*WVLTSPPFQLF
Trigger: GAAGAGCTGAAACGGAGGCGAGGTTAGTACCCAGCAAAGACCTGTGGCGAGGAGAGACAATGAAGAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS CAA 72 bp GTGGTCCTCTTCATTGTCTCTCCTCGCCACAGGTCTTaGCTGGGTACTAACCTCGCCTCCGTTTCAGCTCTT +
Preference number: 6 (lower is better)
Translates to: VVLFIVSPRHRS*LGTNLASVSAL
Trigger: AAGAGCTGAAACGGAGGCGAGGTTAGTACCCAGCAAAGACCTGTGGCGAGGAGAGACAATGAAGAGGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS CCA 72 bp TCCTCTTCATTGTCTCTCCTCGCCACAGGTCTTTGCTaGGTACTAACCTCGCCTCCGTTTCAGCTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: SSSLSLLATGLC*VLTSPPFQLFL
Trigger: CAAGAAGAGCTGAAACGGAGGCGAGGTTAGTACCCAGCAAAGACCTGTGGCGAGGAGAGACAATGAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487858.1
CDS CAA 72 bp TATTCCACATTTAATAGCAGGCCCACTGATTTCCACTaGCCCATGTTAGAACACCTCCTAAGGAGACTGCCT +
Preference number: 6 (lower is better)
Translates to: YSTFNSRPTDFH*PMLEHLLRRLP
Trigger: AGGCAGTCTCCTTAGGAGGTGTTCTAACATGGGCAAGTGGAAATCAGTGGGCCTGCTATTAAATGTGGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465787.5
CDS CAA 90 bp TTAGAATCATATTCCACATTTAATAGCAGGCCCACTGATTTCCACTaGCCCATGTTAGAACACCTCCTAAGGAGACTGCCTGATTCTGAC +
Preference number: 6 (lower is better)
Translates to: LESYSTFNSRPTDFH*PMLEHLLRRLPDSD
Trigger: GTCAGAATCAGGCAGTCTCCTTAGGAGGTGTTCTAACATGGGCAAGTGGAAATCAGTGGGCCTGCTATTAAATGTGGAATATGATTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465787.5
CDS TCA 72 bp TGCATATATGACTGGGCCAGCATAATTCTTTTAGTCTaGGCGTATTGTGACCAATACAAATATTGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: CIYDWASIILLV*AYCDQYKYCFL
Trigger: AAGGAAGCAATATTTGTATTGGTCACAATACGCTCAGACTAAAAGAATTATGCTGGCCCAGTCATATATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498279.1