RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPZ (Homo sapiens)

Ensembl gene IDs: ENSG00000158887

Ensembl transcript IDs: ENST00000463290.5, ENST00000476410.1, ENST00000488271.1, ENST00000491222.5, ENST00000526189.3, ENST00000533357.5, ENST00000672287.2, ENST00000672602.2, ENST00000674861.1

Found 470 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATaGCCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTAACCCCC +
Preference number: 1 (lower is better)
Translates to: AGAPGSAHPFVAPSR*PSPLGLWRTPPLTP
Trigger: GGGGGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR GCA 90 bp CTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGG +
Preference number: 1 (lower is better)
Translates to: LVLLGDLTAGRSSGL*SSFRSSISMTITFG
Trigger: CCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR CCA 90 bp AGCCAGGGGGACAGGCTGGGGGATGCAGGAGATGGGAATGCCAGGTaGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCA +
Preference number: 1 (lower is better)
Translates to: SQGDRLGDAGDGNAR*PGLEAEGIKVPFFS
Trigger: TGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCCTGTCCCCCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR TCA 90 bp CAGGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTaGGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTG +
Preference number: 1 (lower is better)
Translates to: QAGGCRRWECQVAWT*GRGYQSPFLLSAQV
Trigger: CACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR TCA 90 bp CCATTTCTTAAGGCTCATTTGCCCCCTCCCCCACTCCCTGACCTATaGGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAG +
Preference number: 1 (lower is better)
Translates to: PFLKAHLPPPPLPDL*GSILSLCLSPQDLE
Trigger: CTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR CCA 90 bp TGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCCAAAGTaGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGG +
Preference number: 1 (lower is better)
Translates to: CLSPQDLESQNSAPK*SGGTNAILKCEDQG
Trigger: CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR CCA 90 bp ACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTaGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATG +
Preference number: 1 (lower is better)
Translates to: TYEDPFSLSVSLLKT*SPRTVLQSGQGEPM
Trigger: CATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR GCA 90 bp GGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: GDAGDGNARWPGLEAEGIRSSGL*SSFRSS
Trigger: GGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCG...GATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR TCA 90 bp GTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTGTAGCTCCATCTCGATaGCCATCACCTTTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: VFEAGSAGGLDSRPELRAVAPSR*PSPLGL
Trigger: AAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTAC...AGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR TCA 90 bp ATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTTCTGCTGGGGGACTTaGCAGCAGGCCGGAGCTCCG +
Preference number: 2 (lower is better)
Translates to: MGMPGGLDLRQRVSKSLSFCWGT*QQAGAP
Trigger: CGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAA...AGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR TCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGTTCTGCTGGGGGACTTaGCAGCAGGCCGGAGCTCCG +
Preference number: 2 (lower is better)
Translates to: APKWSGGTNAILKCEDQGFCWGT*QQAGAP
Trigger: CGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAA...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR GCA 90 bp GGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: GDGNARWPGLEAEGIKVPRSSGL*SSFRSS
Trigger: GGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCG...AGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR CAA 90 bp ATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTaGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGC +
Preference number: 2 (lower is better)
Translates to: IMFLRAFLRLVLLGD*TAGRSSGLCSSFRS
Trigger: GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR CAA 90 bp GATCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTaGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCC +
Preference number: 2 (lower is better)
Translates to: DHLSEFRPIMFLRAF*RLVLLGDLTAGRSS
Trigger: GGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR GCA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGRSSGL*SSFRSS
Trigger: GGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCG...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR CAA 90 bp ACAGGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTaGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: TGWGMQEMGMPGGLD*RQRVSKSLSSQCSG
Trigger: ACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR GCA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSRSSGL*SSFRSS
Trigger: GGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCG...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CCA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCGATGACCATCACCTTTaGGCCTTTGGCGGACTCCAC +
Preference number: 2 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLDDHHL*AFGGLH
Trigger: GTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATC...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTAAGGAGAGTCTGATCTaGGTGCTCTGGGTATTAGCT +
Preference number: 2 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGKESLI*VLWVLA
Trigger: AGCTAATACCCAGAGCACCCAGATCAGACTCTCCTT...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTGGTAGGATTAGCTCCTaGGCTCCCAGAAAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLGRISS*APRKPG
Trigger: CCCTGGCTTTCTGGGAGCCCAGGAGCTAATCCTACC...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR TCA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCGTAGCTCCATCTCGATaGCCATCACCTTTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVVAPSR*PSPLGL
Trigger: AAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTAC...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR TCA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCTGCTATACTGAAGTGTaGGGATCAGGGGCCCCTCTA +
Preference number: 2 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLCYTEV*GSGAPL
Trigger: TAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCA...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR TCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGCAGGTGGCCTGGACTTaGGGCAGAGGGTATCAAAGT +
Preference number: 2 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWQVAWT*GRGYQS
Trigger: ACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTG...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR GCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCAGAATCCCCTGTGGCTaGAGTGCAGCCTCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLRIPCG*SAASSS
Trigger: GGAGGAAGAGGCTGCACTGCAGCCACAGGGGATTCT...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCGCTCTGGGTATTAGCTaGGGGGACAGAGTATGGAGC +
Preference number: 2 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFALGIS*GDRVWS
Trigger: GCTCCATACTCTGTCCCCCCAGCTAATACCCAGAGC...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTGCTCTGGGTATTAGCTaGGGGGACAGAGTATGGAGC +
Preference number: 2 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLALGIS*GDRVWS
Trigger: GCTCCATACTCTGTCCCCCCAGCTAATACCCAGAGC...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATAGGTAGGATTAGCTCCTaGGCTCCCAGAAAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: DLESQNSAPKWSGGTNAIGRISS*APRKPG
Trigger: CCCTGGCTTTCTGGGAGCCCAGGAGCTAATCCTACC...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGGATGGGAATGCCAGGTaGCCTGGACTTGAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: APKWSGGTNAILKCEDQGDGNAR*PGLEAE
Trigger: CTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR TCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCAGGTGGCCTGGACTTaGGGCAGAGGGTATCAAAGT +
Preference number: 2 (lower is better)
Translates to: APKWSGGTNAILKCEDQGQVAWT*GRGYQS
Trigger: ACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTG...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGTCACCTTTGGGCCTTTaGCGGACTCCACCCCTAACC +
Preference number: 2 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLSPLGL*RTPPLT
Trigger: GGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGA...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CCA 90 bp TCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCACCTTTGGGCCTTTaGCGGACTCCACCCCTAACC +
Preference number: 2 (lower is better)
Translates to: SLVRVQAHHVLEGVFEAGSPLGL*RTPPLT
Trigger: GGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGA...ACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CCA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGTCACCTTTGGGCCTTTaGCGGACTCCACCCCTAACC +
Preference number: 2 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWSPLGL*RTPPLT
Trigger: GGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGA...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATAGCTCTGGGTATTAGCTaGGGGGACAGAGTATGGAGC +
Preference number: 2 (lower is better)
Translates to: DLESQNSAPKWSGGTNAIALGIS*GDRVWS
Trigger: GCTCCATACTCTGTCCCCCCAGCTAATACCCAGAGC...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp CTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGGACAGGCGCTCTGGGTATTAGCTaGGGGGACAGAGTATGGAGC +
Preference number: 2 (lower is better)
Translates to: LEAEGIKVPFFSVLRWTGALGIS*GDRVWS
Trigger: GCTCCATACTCTGTCCCCCCAGCTAATACCCAGAGC...GCCTGTCCACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR TCA 90 bp GGGGGCGTGAATTGCAAAAGCCACATGACGTCATTGGTCCTCAGTCATGGGTGTGTAGCTCCATCTCGATaGCCATCACCTTTGGGCCTT +
Preference number: 2 (lower is better)
Translates to: GGVNCKSHMTSLVLSHGCVAPSR*PSPLGL
Trigger: AAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTAC...ACACCCATGACTGAGGACCAATGACGTCATGTGGCTTTTGCAATTCACGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CCA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCAAGGAGAGTCTGATCTaGGTGCTCTGGGTATTAGCT +
Preference number: 2 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLKESLI*VLWVLA
Trigger: AGCTAATACCCAGAGCACCCAGATCAGACTCTCCTT...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCTCTCTCCTCAAGACCTaGAGTCCCAGAACAGTGCTC +
Preference number: 2 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLSLLKT*SPRTVL
Trigger: GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGA...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTGAGAATACAATTGCCTaGGGAATGAATTCTGGAATG +
Preference number: 2 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGENTIA*GMNSGM
Trigger: CATTCCAGAATTCATTCCCCAGGCAATTGTATTCTC...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR TCA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCTGTAAGGGCAGAGGATaGGCACAGGTAAACAAACAA +
Preference number: 2 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLCKGRG*AQVNKQ
Trigger: TTGTTTGTTTACCTGTGCTCATCCTCTGCCCTTACA...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGAAGGAGAGTCTGATCTaGGTGCTCTGGGTATTAGCT +
Preference number: 2 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWKESLI*VLWVLA
Trigger: AGCTAATACCCAGAGCACCCAGATCAGACTCTCCTT...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGCCCCTCTACTTGGGCTaGCTCTTCATTAAGGACTTA +
Preference number: 2 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWPLYLG*LFIKDL
Trigger: TAAGTCCTTAATGAAGAGCCAGCCCAAGTAGAGGGG...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCAACAGTGCTCCAAAGTaGTCAGGGGGAACCAATGCT +
Preference number: 2 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLNSAPK*SGGTNA
Trigger: AGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTT...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR TCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGTGTAAGGGCAGAGGATaGGCACAGGTAAACAAACAA +
Preference number: 2 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWCKGRG*AQVNKQ
Trigger: TTGTTTGTTTACCTGTGCTCATCCTCTGCCCTTACA...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR TCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGATTGCAAAAGCCACATaGCGTCATTGGTCCTCAGTC +
Preference number: 2 (lower is better)
Translates to: APKWSGGTNAILKCEDQGIAKAT*RHWSSV
Trigger: GACTGAGGACCAATGACGTCATGTGGCTTTTGCAAT...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR GCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATAGGGGGAGAATACAATTaGCTGGGGAATGAATTCTGG +
Preference number: 2 (lower is better)
Translates to: DLESQNSAPKWSGGTNAIGGEYN*LGNEFW
Trigger: CCAGAATTCATTCCCCAGGCAATTGTATTCTCCCCC...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR GCA 90 bp ATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTGGGGGAGAATACAATTaGCTGGGGAATGAATTCTGG +
Preference number: 2 (lower is better)
Translates to: MGMPGGLDLRQRVSKSLSGGEYN*LGNEFW
Trigger: CCAGAATTCATTCCCCAGGCAATTGTATTCTCCCCC...AGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGGACAGAGTATGGAGCTaGGGAATGAATTCTGGAATG +
Preference number: 2 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWDRVWS*GMNSGM
Trigger: CATTCCAGAATTCATTCCCCAGCTCCATACTCTGTC...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463290.5
3UTR-3UTR CCA 90 bp ACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCTTCCAGGGGCCCCTCTACTTaGGCTGGCTCTTCATTAAGG +
Preference number: 2 (lower is better)
Translates to: TECRKILRIPCGCSAASSRGPST*AGSSLR
Trigger: CCTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCT...GGAAGAGGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAAGGAGAGTCTGATCTaGGTGCTCTGGGTATTAGCT +
Preference number: 2 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWKESLI*VLWVLA
Trigger: AGCTAATACCCAGAGCACCCAGATCAGACTCTCCTT...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR TCA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGTGTAAGGGCAGAGGATaGGCACAGGTAAACAAACAA +
Preference number: 2 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWCKGRG*AQVNKQ
Trigger: TTGTTTGTTTACCTGTGCTCATCCTCTGCCCTTACA...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR TCA 90 bp ACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCTTCCGAACCAATGCTATACTaGAGTGTGAGGATCAGGGGC +
Preference number: 2 (lower is better)
Translates to: TECRKILRIPCGCSAASSEPMLY*SVRIRG
Trigger: GCCCCTGATCCTCACACTTCAGTATAGCATTGGTTC...GGAAGAGGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCACCTTTGGGCCTTTaGCGGACTCCACCCCTAACC +
Preference number: 2 (lower is better)
Translates to: KYTECRKILRIPCGCSAASPLGL*RTPPLT
Trigger: GGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGA...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR GCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTTCTTAAGGCTCATTTaGCCCCTCCCCCACTCCCTG +
Preference number: 2 (lower is better)
Translates to: KYTECRKILRIPCGCSAAFLRLI*PLPHSL
Trigger: CAGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAA...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp ACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCTTCCCCCCTCTACTTGGGCTaGCTCTTCATTAAGGACTTA +
Preference number: 2 (lower is better)
Translates to: TECRKILRIPCGCSAASSPLYLG*LFIKDL
Trigger: TAAGTCCTTAATGAAGAGCCAGCCCAAGTAGAGGGG...GGAAGAGGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCGAGAATACAATTGCCTaGGGAATGAATTCTGGAATG +
Preference number: 2 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLENTIA*GMNSGM
Trigger: CATTCCAGAATTCATTCCCCAGGCAATTGTATTCTC...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp ATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTGAGAATACAATTGCCTaGGGAATGAATTCTGGAATG +
Preference number: 2 (lower is better)
Translates to: MGMPGGLDLRQRVSKSLSENTIA*GMNSGM
Trigger: CATTCCAGAATTCATTCCCCAGGCAATTGTATTCTC...AGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTTCTCAGTGCTCAGGTaGACAGGCACCAAACACACA +
Preference number: 2 (lower is better)
Translates to: KYTECRKILRIPCGCSAAFSVLR*TGTKHT
Trigger: TGTGTGTTTGGTGCCTGTCCACCTGAGCACTGAGAA...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR GCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCGGGGGAGAATACAATTaGCTGGGGAATGAATTCTGG +
Preference number: 2 (lower is better)
Translates to: KYTECRKILRIPCGCSAAGGEYN*LGNEFW
Trigger: CCAGAATTCATTCCCCAGGCAATTGTATTCTCCCCC...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR TCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTGTAAGGGCAGAGGATaGGCACAGGTAAACAAACAA +
Preference number: 2 (lower is better)
Translates to: KYTECRKILRIPCGCSAACKGRG*AQVNKQ
Trigger: TTGTTTGTTTACCTGTGCTCATCCTCTGCCCTTACA...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CAA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGGGGGTGGCGATCACTaGTCCGAGTTCAGGCCCATC +
Preference number: 3 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRGGGDH*SEFRPI
Trigger: GATGGGCCTGAACTCGGACAAGTGATCGCCACCCCC...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGGGTGGCGATCACTaGTCCGAGTTCAGGCCCATC +
Preference number: 3 (lower is better)
Translates to: EGKHLDGGKRSLGPPALAGGGDH*SEFRPI
Trigger: GATGGGCCTGAACTCGGACAAGTGATCGCCACCCCC...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAATCACCTTTGGGCCTTaGGCGGACTCCACCCCTAAC +
Preference number: 3 (lower is better)
Translates to: EGKHLDGGKRSLGPPALAITFGP*ADSTPN
Trigger: GTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGAT...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR GCA 72 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCCATCTCGATGACCATC +
Preference number: 3 (lower is better)
Translates to: LGDLTAGRSSGL*SSFRSSISMTI
Trigger: GATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGGTTCTGCTGGGGGACTaGACAGCAGGCCGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWVLLGD*TAGRSS
Trigger: GGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAAC...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR TCA 72 bp CCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATaGCCATCACCTTTGGGCCTTTGGCGGACTCCACCC +
Preference number: 3 (lower is better)
Translates to: PGSAHPFVAPSR*PSPLGLWRTPP
Trigger: GGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR CCA 72 bp GACAGGCTGGGGGATGCAGGAGATGGGAATGCCAGGTaGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCT +
Preference number: 3 (lower is better)
Translates to: DRLGDAGDGNAR*PGLEAEGIKVP
Trigger: AGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CAA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCGTTCTGCTGGGGGACTaGACAGCAGGCCGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLVLLGD*TAGRSS
Trigger: GGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAAC...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGGTTCTGCTGGGGGACTaGACAGCAGGCCGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWVLLGD*TAGRSS
Trigger: GGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAAC...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp GGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAGGCCCATCATGTTCTaGAGGGCGTTTTTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: GDAGDGNARWPGLEAEGIRPIMF*RAFLRL
Trigger: CAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCT...GATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCTTCTTGAGGGCGTTTTaGAGGCTGGTTCTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLFLRAF*RLVLLG
Trigger: CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAA...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp TGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGATCACCTTTGGGCCTTaGGCGGACTCCACCCCTAAC +
Preference number: 3 (lower is better)
Translates to: WPGLEAEGIKVPFFSVLRITFGP*ADSTPN
Trigger: GTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGAT...CCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGATCACCTTTGGGCCTTaGGCGGACTCCACCCCTAAC +
Preference number: 3 (lower is better)
Translates to: APKWSGGTNAILKCEDQGITFGP*ADSTPN
Trigger: GTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGAT...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTTCTTGAGGGCGTTTTaGAGGCTGGTTCTGCTGGGG +
Preference number: 3 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLFLRAF*RLVLLG
Trigger: CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAA...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGATCACCTTTGGGCCTTaGGCGGACTCCACCCCTAAC +
Preference number: 3 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWITFGP*ADSTPN
Trigger: GTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGAT...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGATCACCTTTGGGCCTTaGGCGGACTCCACCCCTAAC +
Preference number: 3 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLITFGP*ADSTPN
Trigger: GTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGAT...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGAGGCCCATCATGTTCTaGAGGGCGTTTTTGAGGCTG +
Preference number: 3 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWRPIMF*RAFLRL
Trigger: CAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCT...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR-3UTR CAA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCAGCCACATGACGTCATaGGTCCTCAGTCATGGGTGT +
Preference number: 3 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLSHMTS*VLSHGC
Trigger: ACACCCATGACTGAGGACCAATGACGTCATGTGGCT...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR-3UTR CAA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGAGCCACATGACGTCATaGGTCCTCAGTCATGGGTGT +
Preference number: 3 (lower is better)
Translates to: APKWSGGTNAILKCEDQGSHMTS*VLSHGC
Trigger: ACACCCATGACTGAGGACCAATGACGTCATGTGGCT...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
3UTR CCA 72 bp GAAGGAGAGTCTGATCTGGGTGCTCTGGGTATTAGCTaGGGGGACAGAGTATGGAGCTGGGGAATGAATTCT +
Preference number: 3 (lower is better)
Translates to: EGESDLGALGIS*GDRVWSWGMNS
Trigger: AGAATTCATTCCCCAGCTCCATACTCTGTCCCCCCAGCTAATACCCAGAGCACCCAGATCAGACTCTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463290.5
3UTR-3UTR CAA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCGTTCTGCTGGGGGACTaGACAGCAGGCCGGAGCTCC +
Preference number: 3 (lower is better)
Translates to: KYTECRKILRIPCGCSAAVLLGD*TAGRSS
Trigger: GGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAAC...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
3UTR CCA 72 bp AAGCCAGGGGTGAAGGTGGGGGAGAATACAATTGCCTaGGGAATGAATTCTGGAATGAAACTTACATCTCAA +
Preference number: 3 (lower is better)
Translates to: KPGVKVGENTIA*GMNSGMKLTSQ
Trigger: TTGAGATGTAAGTTTCATTCCAGAATTCATTCCCCAGGCAATTGTATTCTCCCCCACCTTCACCCCTGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGGCACTGAGCCTCCTCTaGAGGGCCGCCTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGALSLL*RAACLR
Trigger: ACGCAGGCAGGCGGCCCTGCAGAGGAGGCTCAGTGC...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTTCTGCTGGGGGACTTaGCAGCAGGCCGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GSAGGLDSRPELRALLILFCWGT*QQAGAP
Trigger: CGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAA...AAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp GGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTGACCAGAAGGAGCAGTaGAGGGTCACCCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GSAGGLDSRPELRALLILDQKEQ*RVTREP
Trigger: GGGCTCCCGGGTGACCCTGCACTGCTCCTTCTGGTC...AAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGACCAGAAGGAGCAGTaGAGGGTCACCCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRDQKEQ*RVTREP
Trigger: GGGCTCCCGGGTGACCCTGCACTGCTCCTTCTGGTC...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTGCACTGAGCCTCCTCTaGAGGGCCGCCTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGALSLL*RAACLR
Trigger: ACGCAGGCAGGCGGCCCTGCAGAGGAGGCTCAGTGC...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCATTCTGCTGGGGGACTTaGCAGCAGGCCGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: EGKHLDGGKRSLGPPALAFCWGT*QQAGAP
Trigger: CGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAA...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTTTCTGCTGGGGGACTTaGCAGCAGGCCGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGFCWGT*QQAGAP
Trigger: CGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAA...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTGCAGGGCCGCCTGCCTaGGTAGCCAGCAGTACCGAA +
Preference number: 4 (lower is better)
Translates to: VFEAGSAGGLDSRPELRAAGPPA*VASSTE
Trigger: TTCGGTACTGCTGGCTACGCAGGCAGGCGGCCCTGC...AGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCCGGTGTAAACCACGATaGCCTGGGCCGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSRCKPR*PGPGTA
Trigger: TGCTGTCCCCGGCCCAGGCCATCGTGGTTTACACCG...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCTTCTGCTGGGGGACTTaGCAGCAGGCCGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GDAGDGNARWPGLEAEGIFCWGT*QQAGAP
Trigger: CGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAA...GATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCGACCAGAAGGAGCAGTaGAGGGTCACCCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GDAGDGNARWPGLEAEGIDQKEQ*RVTREP
Trigger: GGGCTCCCGGGTGACCCTGCACTGCTCCTTCTGGTC...GATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTCGGTGTAAACCACGATaGCCTGGGCCGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGRCKPR*PGPGTA
Trigger: TGCTGTCCCCGGCCCAGGCCATCGTGGTTTACACCG...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGTCGAAATGGCATCTCTaGCCCCTTCGGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRSKWHL*PLRAGS
Trigger: GCTACCAGCCCGAAGGGGGCAGAGATGCCATTTCGA...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCGAAATGGCATCTCTaGCCCCTTCGGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSSKWHL*PLRAGS
Trigger: GCTACCAGCCCGAAGGGGGCAGAGATGCCATTTCGA...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLRSSGL*SSFRSS
Trigger: GGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCG...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCACCTTTGGGCCTTTaGCGGACTCCACCCCTAACC +
Preference number: 4 (lower is better)
Translates to: GSAGGLDSRPELRALLILSPLGL*RTPPLT
Trigger: GGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGA...AAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGGTAGGATTAGCTCCTaGGCTCCCAGAAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GVFEAGSAGGLDSRPELRGRISS*APRKPG
Trigger: CCCTGGCTTTCTGGGAGCCCAGGAGCTAATCCTACC...CCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCGATGGGAATGCCAGGTaGCCTGGACTTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSDGNAR*PGLEAE
Trigger: CTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTGGTAGCGCCAGGTaGAGGAGATGTCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: GVFEAGSAGGLDSRPELRAGSAR*RRCHLR
Trigger: TCTCAGATGACATCTCCTTCACCTGGCGCTACCAGC...CCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGCTGGTAGCGCCAGGTaGAGGAGATGTCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRAGSAR*RRCHLR
Trigger: TCTCAGATGACATCTCCTTCACCTGGCGCTACCAGC...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGACTGGATGCGCTCTTTaGAGGTCCCCACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGTGCAL*RSPPRQ
Trigger: TTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGT...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCCCCTCCCCCACTCCCTaGCCTATGAGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLPSPTP*PMRIHS
Trigger: AGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGG...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTCCCTCCCCCACTCCCTaGCCTATGAGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGPSPTP*PMRIHS
Trigger: AGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGG...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTGCAGGGCCGCCTGCCTaGGTAGCCAGCAGTACCGAA +
Preference number: 4 (lower is better)
Translates to: GDGNARWPGLEAEGIKVPAGPPA*VASSTE
Trigger: TTCGGTACTGCTGGCTACGCAGGCAGGCGGCCCTGC...AGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCTCTGCAGGGCCGCCTaGCTGCGTAGCCAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVLCRAA*LRSQQY
Trigger: GTACTGCTGGCTACGCAGGCAGGCGGCCCTGCAGAG...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCTGCAGGGCCGCCTaGCTGCGTAGCCAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLLCRAA*LRSQQY
Trigger: GTACTGCTGGCTACGCAGGCAGGCGGCCCTGCAGAG...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGCACTGAGCCTCCTCTaGAGGGCCGCCTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKALSLL*RAACLR
Trigger: ACGCAGGCAGGCGGCCCTGCAGAGGAGGCTCAGTGC...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCGCACTGAGCCTCCTCTaGAGGGCCGCCTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFALSLL*RAACLR
Trigger: ACGCAGGCAGGCGGCCCTGCAGAGGAGGCTCAGTGC...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGCTGTGGTCCAGCATTaGATACAGCACTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRAVVQH*IQHWRL
Trigger: CAGACGCCAGTGCTGTATGCAATGCTGGACCACAGC...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRSSGLCSSFRSSISMTIRSSGL*SSFRSS
Trigger: GGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCG...GATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTTCACCTTTGGGCCTTTaGCGGACTCCACCCCTAACC +
Preference number: 4 (lower is better)
Translates to: VFEAGSAGGLDSRPELRASPLGL*RTPPLT
Trigger: GGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGA...AGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCGATGACCATCACCTTTaGGCCTTTGGCGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSDDHHL*AFGGLH
Trigger: GTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATC...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCGATGGGAATGCCAGGTaGCCTGGACTTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EGVFEAGSAGGLDSRPELDGNAR*PGLEAE
Trigger: CTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC...GAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCGCTGGTAGCGCCAGGTaGAGGAGATGTCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLAGSAR*RRCHLR
Trigger: TCTCAGATGACATCTCCTTCACCTGGCGCTACCAGC...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTACTGGATGCGCTCTTTaGAGGTCCCCACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: VFEAGSAGGLDSRPELRATGCAL*RSPPRQ
Trigger: TTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGT...AGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTACTGGATGCGCTCTTTaGAGGTCCCCACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGTGCAL*RSPPRQ
Trigger: TTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGT...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGACATACAGCGTGACCTaGGAGGTCTTGCCCACTATG +
Preference number: 4 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGTYSVT*EVLPTM
Trigger: CATAGTGGGCAAGACCTCTCAGGTCACGCTGTATGT...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGACATACAGCGTGACCTaGGAGGTCTTGCCCACTATG +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRTYSVT*EVLPTM
Trigger: CATAGTGGGCAAGACCTCTCAGGTCACGCTGTATGT...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCACATACAGCGTGACCTaGGAGGTCTTGCCCACTATG +
Preference number: 4 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSTYSVT*EVLPTM
Trigger: CATAGTGGGCAAGACCTCTCAGGTCACGCTGTATGT...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGCAAAGACATACAGCGTaGCCTGAGAGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRQRHTA*PERSCP
Trigger: TGGGCAAGACCTCTCAGGTCACGCTGTATGTCTTTG...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGTGGCCTTCTTCTCACTaGCAGCTTTGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGWPSSH*QLWCFC
Trigger: GCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCA...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGTGGCCTTCTTCTCACTaGCAGCTTTGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRWPSSH*QLWCFC
Trigger: GCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCA...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAATTCTGCTGGGGGACTTaGCAGCAGGCCGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKFCWGT*QQAGAP
Trigger: CGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAA...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCCCACTCCCTGACCTATaGGGATCCATTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSPLPDL*GSILSL
Trigger: GAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGG...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGCCACTCCCTGACCTATaGGGATCCATTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRPLPDL*GSILSL
Trigger: GAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGG...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCGACCAGAAGGAGCAGTaGAGGGTCACCCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFDQKEQ*RVTREP
Trigger: GGGCTCCCGGGTGACCCTGCACTGCTCCTTCTGGTC...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGCAGGGCCGCCTGCCTaGGTAGCCAGCAGTACCGAA +
Preference number: 4 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGAGPPA*VASSTE
Trigger: TTCGGTACTGCTGGCTACGCAGGCAGGCGGCCCTGC...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGCAGGGCCGCCTGCCTaGGTAGCCAGCAGTACCGAA +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKAGPPA*VASSTE
Trigger: TTCGGTACTGCTGGCTACGCAGGCAGGCGGCCCTGC...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp ATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTGCACTGAGCCTCCTCTaGAGGGCCGCCTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: MGMPGGLDLRQRVSKSLSALSLL*RAACLR
Trigger: ACGCAGGCAGGCGGCCCTGCAGAGGAGGCTCAGTGC...AGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCGCTGTGGTCCAGCATTaGATACAGCACTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: EGVFEAGSAGGLDSRPELAVVQH*IQHWRL
Trigger: CAGACGCCAGTGCTGTATGCAATGCTGGACCACAGC...GAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGCTGTGGTCCAGCATTaGATACAGCACTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: EGKHLDGGKRSLGPPALAAVVQH*IQHWRL
Trigger: CAGACGCCAGTGCTGTATGCAATGCTGGACCACAGC...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp TCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTAACCCCCGATCCGGAGTCCCAGAACAGTaGTCCAAAGTGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SMTITFGPLADSTPNPRSGVPEQ*SKVVRG
Trigger: CCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCC...GGATCGGGGGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCATTCTTAAGGCTCATTTaGCCCCTCCCCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: EGKHLDGGKRSLGPPALAFLRLI*PLPHSL
Trigger: CAGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAA...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp TTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGAGAATCCCCTGTGGCTaGAGTGCAGCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LTAGRSSGLCSSFRSSISRIPCG*SAASSS
Trigger: GGAGGAAGAGGCTGCACTGCAGCCACAGGGGATTCT...CGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp GGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCAGAATCCCCTGTGGCTaGAGTGCAGCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRSSGLCSSFRSSISMTIRIPCG*SAASSS
Trigger: GGAGGAAGAGGCTGCACTGCAGCCACAGGGGATTCT...GATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCGGTGTAAACCACGATaGCCTGGGCCGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVRCKPR*PGPGTA
Trigger: TGCTGTCCCCGGCCCAGGCCATCGTGGTTTACACCG...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCAGTGGAAGATCGAAATaGCATCTCTGCCCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSSGRSK*HLCPLR
Trigger: CCGAAGGGGGCAGAGATGCCATTTCGATCTTCCACT...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGAGTGGAAGATCGAAATaGCATCTCTGCCCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGSGRSK*HLCPLR
Trigger: CCGAAGGGGGCAGAGATGCCATTTCGATCTTCCACT...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCGATGACCATCACCTTTaGGCCTTTGGCGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: EGVFEAGSAGGLDSRPELDDHHL*AFGGLH
Trigger: GTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATC...GAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCAGGGGCCCCTCTACTTaGGCTGGCTCTTCATTAAGG +
Preference number: 4 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLRGPST*AGSSLR
Trigger: CCTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCT...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTAGGGGCCCCTCTACTTaGGCTGGCTCTTCATTAAGG +
Preference number: 4 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGRGPST*AGSSLR
Trigger: CCTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCT...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCTCTCCTCAAGACCTaGAGTCCCAGAACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: GSAGGLDSRPELRALLILSLLKT*SPRTVL
Trigger: GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGA...AAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGTCTCTCCTCAAGACCTaGAGTCCCAGAACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGSLLKT*SPRTVL
Trigger: GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGA...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCGAAGGAGATGTCATCTaGGACCCACTCACTGGACCA +
Preference number: 4 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLEGDVI*DPLTGP
Trigger: TGGTCCAGTGAGTGGGTCTCAGATGACATCTCCTTC...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp TTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGGCTGGTAGCGCCAGGTaGAGGAGATGTCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTAGRSSGLCSSFRSSISAGSAR*RRCHLR
Trigger: TCTCAGATGACATCTCCTTCACCTGGCGCTACCAGC...CGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCCAAAGACATACAGCGTaGCCTGAGAGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLQRHTA*PERSCP
Trigger: TGGGCAAGACCTCTCAGGTCACGCTGTATGTCTTTG...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCAAAGACATACAGCGTaGCCTGAGAGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EGVFEAGSAGGLDSRPELQRHTA*PERSCP
Trigger: TGGGCAAGACCTCTCAGGTCACGCTGTATGTCTTTG...GAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCTTCTGCTGGGGGACTTaGCAGCAGGCCGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLFCWGT*QQAGAP
Trigger: CGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAA...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp ATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTGCAGGGCCGCCTGCCTaGGTAGCCAGCAGTACCGAA +
Preference number: 4 (lower is better)
Translates to: MGMPGGLDLRQRVSKSLSAGPPA*VASSTE
Trigger: TTCGGTACTGCTGGCTACGCAGGCAGGCGGCCCTGC...AGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGGCAGGGCCGCCTGCCTaGGTAGCCAGCAGTACCGAA +
Preference number: 4 (lower is better)
Translates to: APKWSGGTNAILKCEDQGAGPPA*VASSTE
Trigger: TTCGGTACTGCTGGCTACGCAGGCAGGCGGCCCTGC...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCCTCTGCAGGGCCGCCTaGCTGCGTAGCCAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLLCRAA*LRSQQY
Trigger: GTACTGCTGGCTACGCAGGCAGGCGGCCCTGCAGAG...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGGGGCGTGAATTGCAAAAGCCACATGACGTCATTGGTCCTCAGTCATGGGTGTCTCTGCAGGGCCGCCTaGCTGCGTAGCCAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: GGVNCKSHMTSLVLSHGCLCRAA*LRSQQY
Trigger: GTACTGCTGGCTACGCAGGCAGGCGGCCCTGCAGAG...ACACCCATGACTGAGGACCAATGACGTCATGTGGCTTTTGCAATTCACGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGCAGCTTTGGTGCTTCTaGTGTGGTCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRQLWCF*CGPALH
Trigger: ATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTG...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp TTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGTTCTTAAGGCTCATTTaGCCCCTCCCCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: LTAGRSSGLCSSFRSSISFLRLI*PLPHSL
Trigger: CAGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAA...CGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTCGGTGTAAACCACGATaGCCTGGGCCGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLRCKPR*PGPGTA
Trigger: TGCTGTCCCCGGCCCAGGCCATCGTGGTTTACACCG...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAAGTGGAAGATCGAAATaGCATCTCTGCCCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: EGKHLDGGKRSLGPPALASGRSK*HLCPLR
Trigger: CCGAAGGGGGCAGAGATGCCATTTCGATCTTCCACT...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTGGGTCCCCTACCCACTaGATGCGCTCTTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: RSSISMTITFGPLADSTPGSPTH*MRSLKV
Trigger: GACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCC...AGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGRRVLS*LVQFPL
Trigger: AAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCG...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCATTGCATACAGCACTaGCGTCTGCCGCCCGCGCTT +
Preference number: 4 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLHCIQH*RLPPAL
Trigger: AAGCGCGGGCGGCAGACGCCAGTGCTGTATGCAATG...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGAGTCTAGGTTGTGTATaGCAATGGAGCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRSLGCV*QWSHPS
Trigger: GGAAGGATGGCTCCATTGTCATACACAACCTAGACT...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCTGCTATACTGAAGTGTaGGGATCAGGGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GDAGDGNARWPGLEAEGICYTEV*GSGAPL
Trigger: TAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCA...GATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp TCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTAACCCCCGATCCCCACTCCCTGACCTATaGGGATCCATTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SMTITFGPLADSTPNPRSPLPDL*GSILSL
Trigger: GAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGG...GGATCGGGGGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTCTGCAGGGCCGCCTaGCTGCGTAGCCAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLLCRAA*LRSQQY
Trigger: GTACTGCTGGCTACGCAGGCAGGCGGCCCTGCAGAG...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGCTCTGCAGGGCCGCCTaGCTGCGTAGCCAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: LCSSFRSSISMTITFGPLLCRAA*LRSQQY
Trigger: GTACTGCTGGCTACGCAGGCAGGCGGCCCTGCAGAG...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAACGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKRSSGL*SSFRSS
Trigger: GGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCG...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCGGAGTCCCAGAACAGTaGTCCAAAGTGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVGVPEQ*SKVVRG
Trigger: CCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCC...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGGACAGGCCGGTGTAAACCACGATaGCCTGGGCCGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: LEAEGIKVPFFSVLRWTGRCKPR*PGPGTA
Trigger: TGCTGTCCCCGGCCCAGGCCATCGTGGTTTACACCG...GCCTGTCCACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTTGGTGCTTCTGCTGTaGTCCAGCATTGCATACAGC +
Preference number: 4 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLLVLLL*SSIAYS
Trigger: GCTGTATGCAATGCTGGACCACAGCAGAAGCACCAA...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTCACCTTTGGGCCTTTaGCGGACTCCACCCCTAACC +
Preference number: 4 (lower is better)
Translates to: GDGNARWPGLEAEGIKVPSPLGL*RTPPLT
Trigger: GGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGA...AGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCAAGGAGAGTCTGATCTaGGTGCTCTGGGTATTAGCT +
Preference number: 4 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSKESLI*VLWVLA
Trigger: AGCTAATACCCAGAGCACCCAGATCAGACTCTCCTT...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTAAGGAGAGTCTGATCTaGGTGCTCTGGGTATTAGCT +
Preference number: 4 (lower is better)
Translates to: GSAGGLDSRPELRALLILKESLI*VLWVLA
Trigger: AGCTAATACCCAGAGCACCCAGATCAGACTCTCCTT...AAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTGGTAGGATTAGCTCCTaGGCTCCCAGAAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GDGNARWPGLEAEGIKVPGRISS*APRKPG
Trigger: CCCTGGCTTTCTGGGAGCCCAGGAGCTAATCCTACC...AGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAAGTCTAGGTTGTGTATaGCAATGGAGCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: EGKHLDGGKRSLGPPALASLGCV*QWSHPS
Trigger: GGAAGGATGGCTCCATTGTCATACACAACCTAGACT...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTAGTCTAGGTTGTGTATaGCAATGGAGCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: VFEAGSAGGLDSRPELRASLGCV*QWSHPS
Trigger: GGAAGGATGGCTCCATTGTCATACACAACCTAGACT...AGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCAGTCTAGGTTGTGTATaGCAATGGAGCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: EGVFEAGSAGGLDSRPELSLGCV*QWSHPS
Trigger: GGAAGGATGGCTCCATTGTCATACACAACCTAGACT...GAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCATTGCAAAAGCCACATaGCGTCATTGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: EGVFEAGSAGGLDSRPELIAKAT*RHWSSV
Trigger: GACTGAGGACCAATGACGTCATGTGGCTTTTGCAAT...GAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp TTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGGAACCAATGCTATACTaGAGTGTGAGGATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LTAGRSSGLCSSFRSSISEPMLY*SVRIRG
Trigger: GCCCCTGATCCTCACACTTCAGTATAGCATTGGTTC...CGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCGAACCAATGCTATACTaGAGTGTGAGGATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRSSGLCSSFRSSISMTIEPMLY*SVRIRG
Trigger: GCCCCTGATCCTCACACTTCAGTATAGCATTGGTTC...GATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTGAGCATCTGTGGGGTTaGGAAAGTGGGGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLEHLWG*ESGGPG
Trigger: TCCTGGTCCCCCACTTTCTCAACCCCACAGATGCTC...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526189.3
ENST00000533357.5
ENST00000672602.2
CDS-3UTR TCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGAGCATCTGTGGGGTTaGGAAAGTGGGGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKEHLWG*ESGGPG
Trigger: TCCTGGTCCCCCACTTTCTCAACCCCACAGATGCTC...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526189.3
ENST00000533357.5
ENST00000672602.2
CDS-3UTR GCA 90 bp CTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGGACAGGCCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LEAEGIKVPFFSVLRWTGRSSGL*SSFRSS
Trigger: GGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCG...GCCTGTCCACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp TGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: WPGLEAEGIKVPFFSVLRRSSGL*SSFRSS
Trigger: GGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCG...CCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAAGAATCCCCTGTGGCTaGAGTGCAGCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKRIPCG*SAASSS
Trigger: GGAGGAAGAGGCTGCACTGCAGCCACAGGGGATTCT...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGGGAGAATACAATTaGCTGGGGAATGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: EGKHLDGGKRSLGPPALAGGEYN*LGNEFW
Trigger: CCAGAATTCATTCCCCAGGCAATTGTATTCTCCCCC...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTGGGGGAGAATACAATTaGCTGGGGAATGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGGGEYN*LGNEFW
Trigger: CCAGAATTCATTCCCCAGGCAATTGTATTCTCCCCC...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTGGCCGGGGACAGCACTaGAAGCACAAAGTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLGRGQH*KHKVGN
Trigger: ATTCCCCACTTTGTGCTTGCAGTGCTGTCCCCGGCC...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491222.5
ENST00000672287.2
CDS-3UTR CCA 90 bp CGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: RSSISMTITFGPLADSTPRRVLS*LVQFPL
Trigger: AAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCG...AGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp CTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGGACAGGCCATTGCATACAGCACTaGCGTCTGCCGCCCGCGCTT +
Preference number: 4 (lower is better)
Translates to: LEAEGIKVPFFSVLRWTGHCIQH*RLPPAL
Trigger: AAGCGCGGGCGGCAGACGCCAGTGCTGTATGCAATG...GCCTGTCCACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGCATTGCATACAGCACTaGCGTCTGCCGCCCGCGCTT +
Preference number: 4 (lower is better)
Translates to: WPGLEAEGIKVPFFSVLRHCIQH*RLPPAL
Trigger: AAGCGCGGGCGGCAGACGCCAGTGCTGTATGCAATG...CCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATACATTGCATACAGCACTaGCGTCTGCCGCCCGCGCTT +
Preference number: 4 (lower is better)
Translates to: DLESQNSAPKWSGGTNAIHCIQH*RLPPAL
Trigger: AAGCGCGGGCGGCAGACGCCAGTGCTGTATGCAATG...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCTTGGTGCTTCTGCTGTaGTCCAGCATTGCATACAGC +
Preference number: 4 (lower is better)
Translates to: GRSSGLCSSFRSSISMTILVLLL*SSIAYS
Trigger: GCTGTATGCAATGCTGGACCACAGCAGAAGCACCAA...GATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCGCTCTGGGTATTAGCTaGGGGGACAGAGTATGGAGC +
Preference number: 4 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVALGIS*GDRVWS
Trigger: GCTCCATACTCTGTCCCCCCAGCTAATACCCAGAGC...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTCCCCTCTACTTGGGCTaGCTCTTCATTAAGGACTTA +
Preference number: 4 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGPLYLG*LFIKDL
Trigger: TAAGTCCTTAATGAAGAGCCAGCCCAAGTAGAGGGG...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCAGGGGCCCCTCTACTTaGGCTGGCTCTTCATTAAGG +
Preference number: 4 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVRGPST*AGSSLR
Trigger: CCTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCT...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCAACAGTGCTCCAAAGTaGTCAGGGGGAACCAATGCT +
Preference number: 4 (lower is better)
Translates to: GRSSGLCSSFRSSISMTINSAPK*SGGTNA
Trigger: AGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTT...GATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGGGTAGGATTAGCTCCTaGGCTCCCAGAAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWGRISS*APRKPG
Trigger: CCCTGGCTTTCTGGGAGCCCAGGAGCTAATCCTACC...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCTTCTCAGTGCTCAGGTaGACAGGCACCAAACACACA +
Preference number: 4 (lower is better)
Translates to: GDAGDGNARWPGLEAEGIFSVLR*TGTKHT
Trigger: TGTGTGTTTGGTGCCTGTCCACCTGAGCACTGAGAA...GATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGTTCTCAGTGCTCAGGTaGACAGGCACCAAACACACA +
Preference number: 4 (lower is better)
Translates to: LTAGRSSGLCSSFRSSISFSVLR*TGTKHT
Trigger: TGTGTGTTTGGTGCCTGTCCACCTGAGCACTGAGAA...CGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
3UTR CAA 72 bp GGCGATCACTTGTCCGAGTTCAGGCCCATCATGTTCTaGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GDHLSEFRPIMF*RAFLRLVLLGD
Trigger: GTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGATCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCACTGGATGCGCTCTTTaGAGGTCCCCACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFTGCAL*RSPPRQ
Trigger: TTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGT...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCAAAGACATACAGCGTaGCCTGAGAGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLQRHTA*PERSCP
Trigger: TGGGCAAGACCTCTCAGGTCACGCTGTATGTCTTTG...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCATGTAAGGGCAGAGGATaGGCACAGGTAAACAAACAA +
Preference number: 4 (lower is better)
Translates to: EGKHLDGGKRSLGPPALACKGRG*AQVNKQ
Trigger: TTGTTTGTTTACCTGTGCTCATCCTCTGCCCTTACA...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp TCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTAACCCCCGATCCATTGCAAAAGCCACATaGCGTCATTGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: SMTITFGPLADSTPNPRSIAKAT*RHWSSV
Trigger: GACTGAGGACCAATGACGTCATGTGGCTTTTGCAAT...GGATCGGGGGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATACCCTCCCCCACTCCCTaGCCTATGAGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: DLESQNSAPKWSGGTNAIPSPTP*PMRIHS
Trigger: AGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGG...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGGACAGGCCCCTCCCCCACTCCCTaGCCTATGAGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: LEAEGIKVPFFSVLRWTGPSPTP*PMRIHS
Trigger: AGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGG...GCCTGTCCACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTCAGGTGGCCTGGACTTaGGGCAGAGGGTATCAAAGT +
Preference number: 4 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLQVAWT*GRGYQS
Trigger: ACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTG...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAACAGGTGGCCTGGACTTaGGGCAGAGGGTATCAAAGT +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKQVAWT*GRGYQS
Trigger: ACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTG...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTGAGCATCTGTGGGGTTaGGAAAGTGGGGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSEHLWG*ESGGPG
Trigger: TCCTGGTCCCCCACTTTCTCAACCCCACAGATGCTC...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526189.3
ENST00000533357.5
ENST00000672602.2
CDS-3UTR GCA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTTCGAAATGGCATCTCTaGCCCCTTCGGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSSKWHL*PLRAGS
Trigger: GCTACCAGCCCGAAGGGGGCAGAGATGCCATTTCGA...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATATCGAAATGGCATCTCTaGCCCCTTCGGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: DLESQNSAPKWSGGTNAISKWHL*PLRAGS
Trigger: GCTACCAGCCCGAAGGGGGCAGAGATGCCATTTCGA...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp CGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTCAGCTTTGGTGCTTCTaGTGTGGTCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: RSSISMTITFGPLADSTPQLWCF*CGPALH
Trigger: ATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTG...AGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp TCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTCGGAGCTCCGGGCTCTaGTCATCCTTTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLVRVQAHHVLEGVFEAGRSSGL*SSFRSS
Trigger: GGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCG...ACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGGGAGTCCCAGAACAGTaGTCCAAAGTGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: APKWSGGTNAILKCEDQGGVPEQ*SKVVRG
Trigger: CCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCC...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTGGAGTCCCAGAACAGTaGTCCAAAGTGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSGVPEQ*SKVVRG
Trigger: CCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCC...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGTTCTTAAGGCTCATTTaGCCCCTCCCCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWFLRLI*PLPHSL
Trigger: CAGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAA...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGTTCTTAAGGCTCATTTaGCCCCTCCCCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGFLRLI*PLPHSL
Trigger: CAGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAA...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTTAAGGCTCATTTaGCCCCTCCCCCACTCCCTG +
Preference number: 4 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFFLRLI*PLPHSL
Trigger: CAGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAA...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCAGTGGAAGATCGAAATaGCATCTCTGCCCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLSGRSK*HLCPLR
Trigger: CCGAAGGGGGCAGAGATGCCATTTCGATCTTCCACT...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCGGGTCCCCTACCCACTaGATGCGCTCTTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLGSPTH*MRSLKV
Trigger: GACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCC...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGGGGTCCCCTACCCACTaGATGCGCTCTTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: APKWSGGTNAILKCEDQGGSPTH*MRSLKV
Trigger: GACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCC...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATAGGGTCCCCTACCCACTaGATGCGCTCTTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: DLESQNSAPKWSGGTNAIGSPTH*MRSLKV
Trigger: GACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCC...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVRRVLS*LVQFPL
Trigger: AAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCG...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATATCACCTTTGGGCCTTTaGCGGACTCCACCCCTAACC +
Preference number: 4 (lower is better)
Translates to: DLESQNSAPKWSGGTNAISPLGL*RTPPLT
Trigger: GGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGA...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGATGACCATCACCTTTaGGCCTTTGGCGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKDDHHL*AFGGLH
Trigger: GTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATC...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGGCTCTGGGTATTAGCTaGGGGGACAGAGTATGGAGC +
Preference number: 4 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWALGIS*GDRVWS
Trigger: GCTCCATACTCTGTCCCCCCAGCTAATACCCAGAGC...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGCTCTGGGTATTAGCTaGGGGGACAGAGTATGGAGC +
Preference number: 4 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGALGIS*GDRVWS
Trigger: GCTCCATACTCTGTCCCCCCAGCTAATACCCAGAGC...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGGGTAGGATTAGCTCCTaGGCTCCCAGAAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: APKWSGGTNAILKCEDQGGRISS*APRKPG
Trigger: CCCTGGCTTTCTGGGAGCCCAGGAGCTAATCCTACC...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGGATGGGAATGCCAGGTaGCCTGGACTTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WPGLEAEGIKVPFFSVLRDGNAR*PGLEAE
Trigger: CTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC...CCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCGATGGGAATGCCAGGTaGCCTGGACTTGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLDGNAR*PGLEAE
Trigger: CTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAACTGCAAGCACAAAGTaGGGAATCAGATGCACCTAT +
Preference number: 4 (lower is better)
Translates to: EGKHLDGGKRSLGPPALATASTK*GIRCTY
Trigger: ATAGGTGCATCTGATTCCCCACTTTGTGCTTGCAGT...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000491222.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCACTGCAAGCACAAAGTaGGGAATCAGATGCACCTAT +
Preference number: 4 (lower is better)
Translates to: EGVFEAGSAGGLDSRPELTASTK*GIRCTY
Trigger: ATAGGTGCATCTGATTCCCCACTTTGTGCTTGCAGT...GAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000491222.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGAAGGAGATGTCATCTaGGACCCACTCACTGGACCA +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKEGDVI*DPLTGP
Trigger: TGGTCCAGTGAGTGGGTCTCAGATGACATCTCCTTC...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTGCTGGTAGCGCCAGGTaGAGGAGATGTCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSAGSAR*RRCHLR
Trigger: TCTCAGATGACATCTCCTTCACCTGGCGCTACCAGC...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCACTGGATGCGCTCTTTaGAGGTCCCCACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLTGCAL*RSPPRQ
Trigger: TTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGT...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTGGCCTTCTTCTCACTaGCAGCTTTGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLWPSSH*QLWCFC
Trigger: GCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCA...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTGCTATACTGAAGTGTaGGGATCAGGGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLCYTEV*GSGAPL
Trigger: TAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCA...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCGAACCAATGCTATACTaGAGTGTGAGGATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLEPMLY*SVRIRG
Trigger: GCCCCTGATCCTCACACTTCAGTATAGCATTGGTTC...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGCCCTCCCCCACTCCCTaGCCTATGAGGATCCATTCT +
Preference number: 4 (lower is better)
Translates to: LCSSFRSSISMTITFGPLPSPTP*PMRIHS
Trigger: AGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGG...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp TCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCGAAATGGCATCTCTaGCCCCTTCGGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SLVRVQAHHVLEGVFEAGSKWHL*PLRAGS
Trigger: GCTACCAGCCCGAAGGGGGCAGAGATGCCATTTCGA...ACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGTCGAAATGGCATCTCTaGCCCCTTCGGGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LCSSFRSSISMTITFGPLSKWHL*PLRAGS
Trigger: GCTACCAGCCCGAAGGGGGCAGAGATGCCATTTCGA...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCGCTGTGGTCCAGCATTaGATACAGCACTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLAVVQH*IQHWRL
Trigger: CAGACGCCAGTGCTGTATGCAATGCTGGACCACAGC...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCAGCTTTGGTGCTTCTaGTGTGGTCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVQLWCF*CGPALH
Trigger: ATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTG...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTCAGCTTTGGTGCTTCTaGTGTGGTCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: GDGNARWPGLEAEGIKVPQLWCF*CGPALH
Trigger: ATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTG...AGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGAGAATCCCCTGTGGCTaGAGTGCAGCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LCSSFRSSISMTITFGPLRIPCG*SAASSS
Trigger: GGAGGAAGAGGCTGCACTGCAGCCACAGGGGATTCT...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp TCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTGGCCGGGGACAGCACTaGAAGCACAAAGTGGGGAAT +
Preference number: 4 (lower is better)
Translates to: SLVRVQAHHVLEGVFEAGGRGQH*KHKVGN
Trigger: ATTCCCCACTTTGTGCTTGCAGTGCTGTCCCCGGCC...ACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491222.5
ENST00000672287.2
CDS-3UTR CCA 90 bp TTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGTGTAGGGTTGTCCCTTaGCATAGTGGAAGATCGAAA +
Preference number: 4 (lower is better)
Translates to: LTAGRSSGLCSSFRSSISCRVVP*HSGRSK
Trigger: TTTCGATCTTCCACTATGCCAAGGGACAACCCTACA...CGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGGGGTCCCCTACCCACTaGATGCGCTCTTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LCSSFRSSISMTITFGPLGSPTH*MRSLKV
Trigger: GACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCC...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGACCCCGTACCTAGTTaGCACTTTTTCAAAGACATA +
Preference number: 4 (lower is better)
Translates to: EGKHLDGGKRSLGPPALADPVPS*HFFKDI
Trigger: TATGTCTTTGAAAAAGTGCCAACTAGGTACGGGGTC...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGTCACCTTTGGGCCTTTaGCGGACTCCACCCCTAACC +
Preference number: 4 (lower is better)
Translates to: LCSSFRSSISMTITFGPLSPLGL*RTPPLT
Trigger: GGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGA...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp TGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGGATGACCATCACCTTTaGGCCTTTGGCGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: WPGLEAEGIKVPFFSVLRDDHHL*AFGGLH
Trigger: GTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATC...CCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGGGGCGTGAATTGCAAAAGCCACATGACGTCATTGGTCCTCAGTCATGGGTGTGATGACCATCACCTTTaGGCCTTTGGCGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: GGVNCKSHMTSLVLSHGCDDHHL*AFGGLH
Trigger: GTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATC...ACACCCATGACTGAGGACCAATGACGTCATGTGGCTTTTGCAATTCACGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTAACCCCCGATCCGACAGAGTATGGAGCTaGGGAATGAATTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: SMTITFGPLADSTPNPRSDRVWS*GMNSGM
Trigger: CATTCCAGAATTCATTCCCCAGCTCCATACTCTGTC...GGATCGGGGGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463290.5
CDS-3UTR CCA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTAGGGGCCCCTCTACTTaGGCTGGCTCTTCATTAAGG +
Preference number: 4 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSRGPST*AGSSLR
Trigger: CCTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCT...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp ATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTAGGGGCCCCTCTACTTaGGCTGGCTCTTCATTAAGG +
Preference number: 4 (lower is better)
Translates to: MGMPGGLDLRQRVSKSLSRGPST*AGSSLR
Trigger: CCTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCT...AGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCAACAGTGCTCCAAAGTaGTCAGGGGGAACCAATGCT +
Preference number: 4 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLNSAPK*SGGTNA
Trigger: AGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTT...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGAGAATACAATTGCCTaGGGAATGAATTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRENTIA*GMNSGM
Trigger: CATTCCAGAATTCATTCCCCAGGCAATTGTATTCTC...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTGGTAGGATTAGCTCCTaGGCTCCCAGAAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLVRVQAHHVLEGVFEAGGRISS*APRKPG
Trigger: CCCTGGCTTTCTGGGAGCCCAGGAGCTAATCCTACC...ACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GGGGGCGTGAATTGCAAAAGCCACATGACGTCATTGGTCCTCAGTCATGGGTGTGAAGGAGATGTCATCTaGGACCCACTCACTGGACCA +
Preference number: 4 (lower is better)
Translates to: GGVNCKSHMTSLVLSHGCEGDVI*DPLTGP
Trigger: TGGTCCAGTGAGTGGGTCTCAGATGACATCTCCTTC...ACACCCATGACTGAGGACCAATGACGTCATGTGGCTTTTGCAATTCACGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCGAAGGAGATGTCATCTaGGACCCACTCACTGGACCA +
Preference number: 4 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLEGDVI*DPLTGP
Trigger: TGGTCCAGTGAGTGGGTCTCAGATGACATCTCCTTC...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGGACAGGCACATACAGCGTGACCTaGGAGGTCTTGCCCACTATG +
Preference number: 4 (lower is better)
Translates to: LEAEGIKVPFFSVLRWTGTYSVT*EVLPTM
Trigger: CATAGTGGGCAAGACCTCTCAGGTCACGCTGTATGT...GCCTGTCCACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATAACATACAGCGTGACCTaGGAGGTCTTGCCCACTATG +
Preference number: 4 (lower is better)
Translates to: DLESQNSAPKWSGGTNAITYSVT*EVLPTM
Trigger: CATAGTGGGCAAGACCTCTCAGGTCACGCTGTATGT...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGTGGCCTTCTTCTCACTaGCAGCTTTGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: APKWSGGTNAILKCEDQGWPSSH*QLWCFC
Trigger: GCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCA...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTTGGCCTTCTTCTCACTaGCAGCTTTGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSWPSSH*QLWCFC
Trigger: GCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCA...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTGTAGCTCCATCTCGATaGCCATCACCTTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSVAPSR*PSPLGL
Trigger: AAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTAC...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCATTGCAAAAGCCACATaGCGTCATTGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVIAKAT*RHWSSV
Trigger: GACTGAGGACCAATGACGTCATGTGGCTTTTGCAAT...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGTGCTATACTGAAGTGTaGGGATCAGGGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: APKWSGGTNAILKCEDQGCYTEV*GSGAPL
Trigger: TAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCA...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp TGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGCTATACTGAAGTGTaGGGATCAGGGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: WPGLEAEGIKVPFFSVLRCYTEV*GSGAPL
Trigger: TAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCA...CCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCCCACTCCCTGACCTATaGGGATCCATTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLPLPDL*GSILSL
Trigger: GAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGG...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGCAGGTGGCCTGGACTTaGGGCAGAGGGTATCAAAGT +
Preference number: 4 (lower is better)
Translates to: LCSSFRSSISMTITFGPLQVAWT*GRGYQS
Trigger: ACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTG...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCGCACTGAGCCTCCTCTaGAGGGCCGCCTGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAAALSLL*RAACLR
Trigger: ACGCAGGCAGGCGGCCCTGCAGAGGAGGCTCAGTGC...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGGCTGTGGTCCAGCATTaGATACAGCACTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLAVVQH*IQHWRL
Trigger: CAGACGCCAGTGCTGTATGCAATGCTGGACCACAGC...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGCAGCTTTGGTGCTTCTaGTGTGGTCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWQLWCF*CGPALH
Trigger: ATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTG...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCCAGCTTTGGTGCTTCTaGTGTGGTCCAGCATTGCAT +
Preference number: 4 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFQLWCF*CGPALH
Trigger: ATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTG...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGGACAGGCAGTGGAAGATCGAAATaGCATCTCTGCCCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: LEAEGIKVPFFSVLRWTGSGRSK*HLCPLR
Trigger: CCGAAGGGGGCAGAGATGCCATTTCGATCTTCCACT...GCCTGTCCACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTTGTAGGGTTGTCCCTTaGCATAGTGGAAGATCGAAA +
Preference number: 4 (lower is better)
Translates to: RSSISMTITFGPLADSTPCRVVP*HSGRSK
Trigger: TTTCGATCTTCCACTATGCCAAGGGACAACCCTACA...AGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATACGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: DLESQNSAPKWSGGTNAIRRVLS*LVQFPL
Trigger: AAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCG...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLRRVLS*LVQFPL
Trigger: AAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCG...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp ACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCTTCCCATTGCATACAGCACTaGCGTCTGCCGCCCGCGCTT +
Preference number: 4 (lower is better)
Translates to: TECRKILRIPCGCSAASSHCIQH*RLPPAL
Trigger: AAGCGCGGGCGGCAGACGCCAGTGCTGTATGCAATG...GGAAGAGGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGTTGGTGCTTCTGCTGTaGTCCAGCATTGCATACAGC +
Preference number: 4 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGLVLLL*SSIAYS
Trigger: GCTGTATGCAATGCTGGACCACAGCAGAAGCACCAA...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGGATGACCATCACCTTTaGGCCTTTGGCGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLDDHHL*AFGGLH
Trigger: GTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATC...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCAAGGAGAGTCTGATCTaGGTGCTCTGGGTATTAGCT +
Preference number: 4 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVKESLI*VLWVLA
Trigger: AGCTAATACCCAGAGCACCCAGATCAGACTCTCCTT...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTAACAGTGCTCCAAAGTaGTCAGGGGGAACCAATGCT +
Preference number: 4 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLNSAPK*SGGTNA
Trigger: AGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTT...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp ATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCTCCTCAAGACCTaGAGTCCCAGAACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: MGMPGGLDLRQRVSKSLSSLLKT*SPRTVL
Trigger: GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGA...AGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GAGGGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGAGAATACAATTGCCTaGGGAATGAATTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: EGKHLDGGKRSLGPPALAENTIA*GMNSGM
Trigger: CATTCCAGAATTCATTCCCCAGGCAATTGTATTCTC...TGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGTTCTCAGTGCTCAGGTaGACAGGCACCAAACACACA +
Preference number: 4 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWFSVLR*TGTKHT
Trigger: TGTGTGTTTGGTGCCTGTCCACCTGAGCACTGAGAA...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTTCTCAGTGCTCAGGTaGACAGGCACCAAACACACA +
Preference number: 4 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLFSVLR*TGTKHT
Trigger: TGTGTGTTTGGTGCCTGTCCACCTGAGCACTGAGAA...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGGAAGGAGATGTCATCTaGGACCCACTCACTGGACCA +
Preference number: 4 (lower is better)
Translates to: LCSSFRSSISMTITFGPLEGDVI*DPLTGP
Trigger: TGGTCCAGTGAGTGGGTCTCAGATGACATCTCCTTC...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGAGTCTAGGTTGTGTATaGCAATGGAGCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWSLGCV*QWSHPS
Trigger: GGAAGGATGGCTCCATTGTCATACACAACCTAGACT...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp TCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTGGCCTTCTTCTCACTaGCAGCTTTGGTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLVRVQAHHVLEGVFEAGWPSSH*QLWCFC
Trigger: GCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCA...ACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGGTAGCTCCATCTCGATaGCCATCACCTTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LCSSFRSSISMTITFGPLVAPSR*PSPLGL
Trigger: AAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTAC...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp TCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTGTAGCTCCATCTCGATaGCCATCACCTTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLVRVQAHHVLEGVFEAGVAPSR*PSPLGL
Trigger: AAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTAC...ACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGGTAGCTCCATCTCGATaGCCATCACCTTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLVAPSR*PSPLGL
Trigger: AAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTAC...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR TCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAATTGCAAAAGCCACATaGCGTCATTGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKIAKAT*RHWSSV
Trigger: GACTGAGGACCAATGACGTCATGTGGCTTTTGCAAT...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGGGGCGTGAATTGCAAAAGCCACATGACGTCATTGGTCCTCAGTCATGGGTGTGAACCAATGCTATACTaGAGTGTGAGGATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GGVNCKSHMTSLVLSHGCEPMLY*SVRIRG
Trigger: GCCCCTGATCCTCACACTTCAGTATAGCATTGGTTC...ACACCCATGACTGAGGACCAATGACGTCATGTGGCTTTTGCAATTCACGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCCACTCCCTGACCTATaGGGATCCATTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLPLPDL*GSILSL
Trigger: GAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGG...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCGACCAGAAGGAGCAGTaGAGGGTCACCCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAADQKEQ*RVTREP
Trigger: GGGCTCCCGGGTGACCCTGCACTGCTCCTTCTGGTC...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp ACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCTTCCAGAATCCCCTGTGGCTaGAGTGCAGCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TECRKILRIPCGCSAASSRIPCG*SAASSS
Trigger: GGAGGAAGAGGCTGCACTGCAGCCACAGGGGATTCT...GGAAGAGGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWRRVLS*LVQFPL
Trigger: AAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCG...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGGGGCGTGAATTGCAAAAGCCACATGACGTCATTGGTCCTCAGTCATGGGTGTTTGGTGCTTCTGCTGTaGTCCAGCATTGCATACAGC +
Preference number: 4 (lower is better)
Translates to: GGVNCKSHMTSLVLSHGCLVLLL*SSIAYS
Trigger: GCTGTATGCAATGCTGGACCACAGCAGAAGCACCAA...ACACCCATGACTGAGGACCAATGACGTCATGTGGCTTTTGCAATTCACGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTTTGGTGCTTCTGCTGTaGTCCAGCATTGCATACAGC +
Preference number: 4 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSLVLLL*SSIAYS
Trigger: GCTGTATGCAATGCTGGACCACAGCAGAAGCACCAA...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAAAGGAGAGTCTGATCTaGGTGCTCTGGGTATTAGCT +
Preference number: 4 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKKESLI*VLWVLA
Trigger: AGCTAATACCCAGAGCACCCAGATCAGACTCTCCTT...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GCTCCAAAGTGGTCAGGGGGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGAACAGTGCTCCAAAGTaGTCAGGGGGAACCAATGCT +
Preference number: 4 (lower is better)
Translates to: APKWSGGTNAILKCEDQGNSAPK*SGGTNA
Trigger: AGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTT...CCCCTGATCCTCACACTTCAGTATAGCATTGGTTCCCCCTGACCACTTTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGTCTCTCCTCAAGACCTaGAGTCCCAGAACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWSLLKT*SPRTVL
Trigger: GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGA...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATATTCTCAGTGCTCAGGTaGACAGGCACCAAACACACA +
Preference number: 4 (lower is better)
Translates to: DLESQNSAPKWSGGTNAIFSVLR*TGTKHT
Trigger: TGTGTGTTTGGTGCCTGTCCACCTGAGCACTGAGAA...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTATTGCAAAAGCCACATaGCGTCATTGGTCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSIAKAT*RHWSSV
Trigger: GACTGAGGACCAATGACGTCATGTGGCTTTTGCAAT...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGGAACCAATGCTATACTaGAGTGTGAGGATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLEPMLY*SVRIRG
Trigger: GCCCCTGATCCTCACACTTCAGTATAGCATTGGTTC...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR GCA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCGGGGGAGAATACAATTaGCTGGGGAATGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLGGEYN*LGNEFW
Trigger: CCAGAATTCATTCCCCAGGCAATTGTATTCTCCCCC...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp CTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGGACAGGCGGGGGAGAATACAATTaGCTGGGGAATGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: LEAEGIKVPFFSVLRWTGGGEYN*LGNEFW
Trigger: CCAGAATTCATTCCCCAGGCAATTGTATTCTCCCCC...GCCTGTCCACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGTGTAGGGTTGTCCCTTaGCATAGTGGAAGATCGAAA +
Preference number: 4 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGCRVVP*HSGRSK
Trigger: TTTCGATCTTCCACTATGCCAAGGGACAACCCTACA...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGTTGGTGCTTCTGCTGTaGTCCAGCATTGCATACAGC +
Preference number: 4 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLLVLLL*SSIAYS
Trigger: GCTGTATGCAATGCTGGACCACAGCAGAAGCACCAA...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp TGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGCCCCTCTACTTGGGCTaGCTCTTCATTAAGGACTTA +
Preference number: 4 (lower is better)
Translates to: WPGLEAEGIKVPFFSVLRPLYLG*LFIKDL
Trigger: TAAGTCCTTAATGAAGAGCCAGCCCAAGTAGAGGGG...CCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCTAGGTTGTGTATaGCAATGGAGCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWSLGCV*QWSHPS
Trigger: GGAAGGATGGCTCCATTGTCATACACAACCTAGACT...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATATGTAAGGGCAGAGGATaGGCACAGGTAAACAAACAA +
Preference number: 4 (lower is better)
Translates to: DLESQNSAPKWSGGTNAICKGRG*AQVNKQ
Trigger: TTGTTTGTTTACCTGTGCTCATCCTCTGCCCTTACA...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGTAGGGTTGTCCCTTaGCATAGTGGAAGATCGAAA +
Preference number: 4 (lower is better)
Translates to: WPGLEAEGIKVPFFSVLRCRVVP*HSGRSK
Trigger: TTTCGATCTTCCACTATGCCAAGGGACAACCCTACA...CCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GGGGGCGTGAATTGCAAAAGCCACATGACGTCATTGGTCCTCAGTCATGGGTGTTGTAGGGTTGTCCCTTaGCATAGTGGAAGATCGAAA +
Preference number: 4 (lower is better)
Translates to: GGVNCKSHMTSLVLSHGCCRVVP*HSGRSK
Trigger: TTTCGATCTTCCACTATGCCAAGGGACAACCCTACA...ACACCCATGACTGAGGACCAATGACGTCATGTGGCTTTTGCAATTCACGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACCCCGTACCTAGTTaGCACTTTTTCAAAGACATA +
Preference number: 4 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGDPVPS*HFFKDI
Trigger: TATGTCTTTGAAAAAGTGCCAACTAGGTACGGGGTC...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGCCCCTCTACTTGGGCTaGCTCTTCATTAAGGACTTA +
Preference number: 4 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWPLYLG*LFIKDL
Trigger: TAAGTCCTTAATGAAGAGCCAGCCCAAGTAGAGGGG...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCGGAGTCCCAGAACAGTaGTCCAAAGTGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAAGVPEQ*SKVVRG
Trigger: CCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCC...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGTGTAGGGTTGTCCCTTaGCATAGTGGAAGATCGAAA +
Preference number: 4 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLCRVVP*HSGRSK
Trigger: TTTCGATCTTCCACTATGCCAAGGGACAACCCTACA...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCGGGTCCCCTACCCACTaGATGCGCTCTTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAAGSPTH*MRSLKV
Trigger: GACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCC...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp ATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTGACCCCGTACCTAGTTaGCACTTTTTCAAAGACATA +
Preference number: 4 (lower is better)
Translates to: MGMPGGLDLRQRVSKSLSDPVPS*HFFKDI
Trigger: TATGTCTTTGAAAAAGTGCCAACTAGGTACGGGGTC...AGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp ACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCTTCCAACAGTGCTCCAAAGTaGTCAGGGGGAACCAATGCT +
Preference number: 4 (lower is better)
Translates to: TECRKILRIPCGCSAASSNSAPK*SGGTNA
Trigger: AGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTT...GGAAGAGGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCGAGAATACAATTGCCTaGGGAATGAATTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFENTIA*GMNSGM
Trigger: CATTCCAGAATTCATTCCCCAGGCAATTGTATTCTC...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCGCTGGTAGCGCCAGGTaGAGGAGATGTCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAAAGSAR*RRCHLR
Trigger: TCTCAGATGACATCTCCTTCACCTGGCGCTACCAGC...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCACTGGATGCGCTCTTTaGAGGTCCCCACCTCGTCAA +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAATGCAL*RSPPRQ
Trigger: TTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGT...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCGCTGTGGTCCAGCATTaGATACAGCACTGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAAAVVQH*IQHWRL
Trigger: CAGACGCCAGTGCTGTATGCAATGCTGGACCACAGC...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR GCA 90 bp ACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCTTCCGGGGGAGAATACAATTaGCTGGGGAATGAATTCTGG +
Preference number: 4 (lower is better)
Translates to: TECRKILRIPCGCSAASSGGEYN*LGNEFW
Trigger: CCAGAATTCATTCCCCAGGCAATTGTATTCTCCCCC...GGAAGAGGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGGAGAATACAATTGCCTaGGGAATGAATTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: WPGLEAEGIKVPFFSVLRENTIA*GMNSGM
Trigger: CATTCCAGAATTCATTCCCCAGGCAATTGTATTCTC...CCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR TCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCGTAGCTCCATCTCGATaGCCATCACCTTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAAVAPSR*PSPLGL
Trigger: AAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTAC...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCAGTGGAAGATCGAAATaGCATCTCTGCCCCCTTCGG +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAASGRSK*HLCPLR
Trigger: CCGAAGGGGGCAGAGATGCCATTTCGATCTTCCACT...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGGAGAATACAATTGCCTaGGGAATGAATTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWENTIA*GMNSGM
Trigger: CATTCCAGAATTCATTCCCCAGGCAATTGTATTCTC...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCCCCCTCTACTTGGGCTaGCTCTTCATTAAGGACTTA +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAAPLYLG*LFIKDL
Trigger: TAAGTCCTTAATGAAGAGCCAGCCCAAGTAGAGGGG...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CCA 90 bp AAATATACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCGACCCCGTACCTAGTTaGCACTTTTTCAAAGACATA +
Preference number: 4 (lower is better)
Translates to: KYTECRKILRIPCGCSAADPVPS*HFFKDI
Trigger: TATGTCTTTGAAAAAGTGCCAACTAGGTACGGGGTC...GGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGTATATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS GCA 90 bp ACCGAGCGACTGGGGCTTGACTGTTCCCATCCCACCCCTCACTGCTaGCCGGCGGCTCCCAGGGTTCTCCTTCCCATCTTGTCTAGGCCC +
Preference number: 5 (lower is better)
Translates to: TERLGLDCSHPTPHC*PAAPRVLLPILSRP
Trigger: GGGCCTAGACAAGATGGGAAGGAGAACCCTGGGAGCCGCCGGGCAGCAGTGAGGGGTGGGATGGGAACAGTCAAGCCCCAGTCGCTCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS GCA 90 bp GTCACCGAGCGACTGGGGCTTGACTGTTCCCATCCCACCCCTCACTaGTGCCCGGCGGCTCCCAGGGTTCTCCTTCCCATCTTGTCTAGG +
Preference number: 5 (lower is better)
Translates to: VTERLGLDCSHPTPH*CPAAPRVLLPILSR
Trigger: CCTAGACAAGATGGGAAGGAGAACCCTGGGAGCCGCCGGGCAGCAGTGAGGGGTGGGATGGGAACAGTCAAGCCCCAGTCGCTCGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS-3UTR CAA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCGTTCTGCTGGGGGACTaGACAGCAGGCCGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLVLLGD*TAGRSS
Trigger: GGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAAC...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS GCA 90 bp ACTGGCGTCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTTGTaGAATTTCCCCTTCTCCATAGCACTGAGCCTCCTCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TGVCRPRFDASFPGL*NFPFSIALSLLCRA
Trigger: GGCCCTGCAGAGGAGGCTCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGACGCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS GCA 90 bp CCGCTAACCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTTGTaGAATTTCCCCTTCTCCATAGCACTGAGCCTCCTCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PLTCRPRFDASFPGL*NFPFSIALSLLCRA
Trigger: GGCCCTGCAGAGGAGGCTCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGGTTAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS-3UTR CAA 90 bp GAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCGGGGGTGGCGATCACTaGTCCGAGTTCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: EGVFEAGSAGGLDSRPELGGGDH*SEFRPI
Trigger: GATGGGCCTGAACTCGGACAAGTGATCGCCACCCCC...GAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS CCA 90 bp GGGAGCCCACAGCACCATGGACCTCCCTGTCGGTGTAAACCACGATaGCCTGGGCCGGGGACAGCACTGCAAGCACAAAGTGGGGAATCA +
Preference number: 5 (lower is better)
Translates to: GSPQHHGPPCRCKPR*PGPGTALQAQSGES
Trigger: TGATTCCCCACTTTGTGCTTGCAGTGCTGTCCCCGGCCCAGGCCATCGTGGTTTACACCGACAGGGAGGTCCATGGTGCTGTGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491222.5
ENST00000672287.2
CDS-3UTR CAA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTGACTCCCCCAGCCCCTaGGCCTTCTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGDSPSP*AFFSLT
Trigger: TGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGAGTC...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTGACTCCCCCAGCCCCTaGGCCTTCTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: VFEAGSAGGLDSRPELRADSPSP*AFFSLT
Trigger: TGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGAGTC...AGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTCGCTATTTCTTATCCTaGCGAGACTCCCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: GSAGGLDSRPELRALLILRYFLS*RDSPSP
Trigger: GGGGCTGGGGGAGTCTCGCAAGGATAAGAAATAGCG...AAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGCGCTATTTCTTATCCTaGCGAGACTCCCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRRYFLS*RDSPSP
Trigger: GGGGCTGGGGGAGTCTCGCAAGGATAAGAAATAGCG...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCGGGGGTGGCGATCACTaGTCCGAGTTCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: GRSSGLCSSFRSSISMTIGGGDH*SEFRPI
Trigger: GATGGGCCTGAACTCGGACAAGTGATCGCCACCCCC...GATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp TCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTAACCCCCGATCCGGGGGTGGCGATCACTaGTCCGAGTTCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: SMTITFGPLADSTPNPRSGGGDH*SEFRPI
Trigger: GATGGGCCTGAACTCGGACAAGTGATCGCCACCCCC...GGATCGGGGGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTCAGGGGCCCCTCTACTaGGGCTGGCTCTTCATTAAG +
Preference number: 5 (lower is better)
Translates to: GSAGGLDSRPELRALLILQGPLY*GWLFIK
Trigger: CTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCTG...AAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGCAGGGGCCCCTCTACTaGGGCTGGCTCTTCATTAAG +
Preference number: 5 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGQGPLY*GWLFIK
Trigger: CTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCTG...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGCCAGGTGGCCTGGACTaGAGGCAGAGGGTATCAAAG +
Preference number: 5 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGPGGLD*RQRVSK
Trigger: CTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGG...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS CCA 90 bp CCAAGTCCCGCTAACCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTTCTCCATAGCACTGAGCCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PSPANLPPALRRVLS*LVQFPLLHSTEPPL
Trigger: CAGAGGAGGCTCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGGTTAGCGGGACTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS CCA 90 bp GACAGCTTTGGTGCTTCTGCTGTGGTCCAGCATTGCATACAGCACTaGCGTCTGGGGGAGGGGCGCACACATCAGTCACCGAGCGACTGG +
Preference number: 5 (lower is better)
Translates to: DSFGASAVVQHCIQH*RLGEGRTHQSPSDW
Trigger: CCAGTCGCTCGGTGACTGATGTGTGCGCCCCTCCCCCAGACGCCAGTGCTGTATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS-3UTR CAA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSASFPG*CNFPFS
Trigger: GGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGC...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRASFPG*CNFPFS
Trigger: GGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGC...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGTGCTGTGGTCCAGCATaGCATACAGCACTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGCCGPA*HTALAS
Trigger: AGACGCCAGTGCTGTATGCAATGCTGGACCACAGCA...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCCGCTATTTCTTATCCTaGCGAGACTCCCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLRYFLS*RDSPSP
Trigger: GGGGCTGGGGGAGTCTCGCAAGGATAAGAAATAGCG...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCATCACCTTTGGGCCTTaGGCGGACTCCACCCCTAAC +
Preference number: 5 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLITFGP*ADSTPN
Trigger: GTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGAT...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCATCACCTTTGGGCCTTaGGCGGACTCCACCCCTAAC +
Preference number: 5 (lower is better)
Translates to: EGVFEAGSAGGLDSRPELITFGP*ADSTPN
Trigger: GTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGAT...GAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTGTTCTGCTGGGGGACTaGACAGCAGGCCGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GDGNARWPGLEAEGIKVPVLLGD*TAGRSS
Trigger: GGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAAC...AGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTTCTTGAGGGCGTTTTaGAGGCTGGTTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSFLRAF*RLVLLG
Trigger: CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAA...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGTTTCTTAAGGCTCATTaGCCCCCTCCCCCACTCCCT +
Preference number: 5 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGFLKAH*PPPPLP
Trigger: AGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAAA...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS GCA 90 bp AGGGTTCTCCTTCCCATCTTGTCTAGGCCCCAAGTCCCGCTAACCTaGCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTTGTGCAATTTC +
Preference number: 5 (lower is better)
Translates to: RVLLPILSRPQVPLT*RPRFDASFPGLCNF
Trigger: GAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGGTTAGCGGGACTTGGGGCCTAGACAAGATGGGAAGGAGAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS CCA 90 bp ATACAGCACTGGCGTCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTTCTCCATAGCACTGAGCCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: IQHWRLPPALRRVLS*LVQFPLLHSTEPPL
Trigger: CAGAGGAGGCTCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGACGCCAGTGCTGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CCA 90 bp AGCCCCTTGGCCTTCTTCTCACTGACAGCTTTGGTGCTTCTGCTGTaGTCCAGCATTGCATACAGCACTGGCGTCTGCCGCCCGCGCTTC +
Preference number: 5 (lower is better)
Translates to: SPLAFFSLTALVLLL*SSIAYSTGVCRPRF
Trigger: GAAGCGCGGGCGGCAGACGCCAGTGCTGTATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCAAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000463290.5
ENST00000488271.1
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS-3UTR CAA 90 bp GGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCCACTGGATGCGCTCTTaGAAGGTCCCCACCTCGTCA +
Preference number: 5 (lower is better)
Translates to: GDAGDGNARWPGLEAEGIHWMRS*KVPTSS
Trigger: TGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTG...GATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp CTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LGDAGDGNARWPGLEAEGASFPG*CNFPFS
Trigger: GGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGC...ACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTTGCTGTGGTCCAGCATaGCATACAGCACTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: VFEAGSAGGLDSRPELRACCGPA*HTALAS
Trigger: AGACGCCAGTGCTGTATGCAATGCTGGACCACAGCA...AGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGAAAGCACCTAGACGGGGGTAAGAGGAGCCTAGGTCCCCCTGCTCTGGCAGGGTTCTCACTGACAGCTTaGGTGCTTCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GKHLDGGKRSLGPPALAGFSLTA*VLLLWS
Trigger: GGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAA...CCCTGCCAGAGCAGGGGGACCTAGGCTCCTCTTACCCCCGTCTAGGTGCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCATCACCTTTGGGCCTTaGGCGGACTCCACCCCTAAC +
Preference number: 5 (lower is better)
Translates to: GRSSGLCSSFRSSISMTIITFGP*ADSTPN
Trigger: GTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGAT...GATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGTTCTGCTGGGGGACTaGACAGCAGGCCGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGVLLGD*TAGRSS
Trigger: GGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAAC...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTTCTGCTGGGGGACTaGACAGCAGGCCGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKVLLGD*TAGRSS
Trigger: GGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAAC...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGCTGGGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGAGGCCCATCATGTTCTaGAGGGCGTTTTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GWGMQEMGMPGGLDLRQRRPIMF*RAFLRL
Trigger: CAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCT...CCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGCGTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGAGCCACATGACGTCATaGGTCCTCAGTCATGGGTGT +
Preference number: 5 (lower is better)
Translates to: GVFEAGSAGGLDSRPELRSHMTS*VLSHGC
Trigger: ACACCCATGACTGAGGACCAATGACGTCATGTGGCT...CCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp TCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTAACCCCCGATCCCAGGGGCCCCTCTACTaGGGCTGGCTCTTCATTAAG +
Preference number: 5 (lower is better)
Translates to: SMTITFGPLADSTPNPRSQGPLY*GWLFIK
Trigger: CTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCTG...GGATCGGGGGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GTTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTTTTCTTAAGGCTCATTaGCCCCCTCCCCCACTCCCT +
Preference number: 5 (lower is better)
Translates to: VFEAGSAGGLDSRPELRAFLKAH*PPPPLP
Trigger: AGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAAA...AGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp TTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGCCAGGTGGCCTGGACTaGAGGCAGAGGGTATCAAAG +
Preference number: 5 (lower is better)
Translates to: LTAGRSSGLCSSFRSSISPGGLD*RQRVSK
Trigger: CTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGG...CGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS GCA 90 bp ACTGGCGTCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTTGTaGAATTTCCCCTTCTCCATAGCACTGCAAGAAGAGAGACTGCTG +
Preference number: 5 (lower is better)
Translates to: TGVCRPRFDASFPGL*NFPFSIALQEERLL
Trigger: CAGCAGTCTCTCTTCTTGCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGACGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488271.1
CDS-3UTR CAA 90 bp CTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCCTCGTCAATGTAGGGTaGTCCCTTGGCATAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LGDLTAGRSSGLCSSFRSLVNVG*SLGIVE
Trigger: TTCCACTATGCCAAGGGACAACCCTACATTGACGAG...GCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCTGCTGTGGTCCAGCATaGCATACAGCACTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: GRSSGLCSSFRSSISMTICCGPA*HTALAS
Trigger: AGACGCCAGTGCTGTATGCAATGCTGGACCACAGCA...GATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGGGATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCTGCTGTGGTCCAGCATaGCATACAGCACTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: GDAGDGNARWPGLEAEGICCGPA*HTALAS
Trigger: AGACGCCAGTGCTGTATGCAATGCTGGACCACAGCA...GATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TTTTTGAGGCTGGTTCTGCTGGGGGACTTGACAGCAGGCCGGAGCTCCGGGCTCTTCTCACTGACAGCTTaGGTGCTTCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: FLRLVLLGDLTAGRSSGLFSLTA*VLLLWS
Trigger: GGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAA...GAGCCCGGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAACCAGCCTCAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCGACTCCCCCAGCCCCTaGGCCTTCTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVDSPSP*AFFSLT
Trigger: TGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGAGTC...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTAACCCCCGATCCTTCTTGAGGGCGTTTTaGAGGCTGGTTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SMTITFGPLADSTPNPRSFLRAF*RLVLLG
Trigger: CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAA...GGATCGGGGGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGGGGGGTGGCGATCACTaGTCCGAGTTCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGGGGDH*SEFRPI
Trigger: GATGGGCCTGAACTCGGACAAGTGATCGCCACCCCC...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
59% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTGGGGGTGGCGATCACTaGTCCGAGTTCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLGGGDH*SEFRPI
Trigger: GATGGGCCTGAACTCGGACAAGTGATCGCCACCCCC...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS TCA 90 bp AGATCGAAATGGCATCTCTGCCCCCTTCGGGCTGGTAGCGCCAGGTaGAGGAGATGTCATCTGAGACCCACTCACTGGACCAGAAGGAGC +
Preference number: 5 (lower is better)
Translates to: RSKWHLCPLRAGSAR*RRCHLRPTHWTRRS
Trigger: GCTCCTTCTGGTCCAGTGAGTGGGTCTCAGATGACATCTCCTTCACCTGGCGCTACCAGCCCGAAGGGGGCAGAGATGCCATTTCGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS TCA 90 bp AGCCATCCTTCCAGCGAGGGTCCCCTACCCACTGGATGCGCTCTTTaGAGGTCCCCACCTCGTCAATGTAGGGTTGTCCCTTGGCATAGT +
Preference number: 5 (lower is better)
Translates to: SHPSSEGPLPTGCAL*RSPPRQCRVVPWHS
Trigger: ACTATGCCAAGGGACAACCCTACATTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCCTCGCTGGAAGGATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CCA 90 bp ATACAGCACTGGCGTCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTTCTCCATAGCACTGCAAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: IQHWRLPPALRRVLS*LVQFPLLHSTARRE
Trigger: CTCTCTTCTTGCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGACGCCAGTGCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488271.1
CDS-3UTR CAA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCACTGGATGCGCTCTTaGAAGGTCCCCACCTCGTCA +
Preference number: 5 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLHWMRS*KVPTSS
Trigger: TGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTG...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCGACTCCCCCAGCCCCTaGGCCTTCTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFDSPSP*AFFSLT
Trigger: TGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGAGTC...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCGCTATTTCTTATCCTaGCGAGACTCCCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLRYFLS*RDSPSP
Trigger: GGGGCTGGGGGAGTCTCGCAAGGATAAGAAATAGCG...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp CGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTTTCTTGAGGGCGTTTTaGAGGCTGGTTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RSSISMTITFGPLADSTPFLRAF*RLVLLG
Trigger: CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAA...AGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGCCGGAGCTCCGGGCTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCAGGCCCATCATGTTCTaGAGGGCGTTTTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GRSSGLCSSFRSSISMTIRPIMF*RAFLRL
Trigger: CAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCT...GATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAGCCCGGAGCTCCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp ATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTGGGGGTGGCGATCACTaGTCCGAGTTCAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: MGMPGGLDLRQRVSKSLSGGGDH*SEFRPI
Trigger: GATGGGCCTGAACTCGGACAAGTGATCGCCACCCCC...AGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TCGATGACCATCACCTTTGGGCCTTTGGCGGACTCCACCCCTAACCCCCGATCCAGCCACATGACGTCATaGGTCCTCAGTCATGGGTGT +
Preference number: 5 (lower is better)
Translates to: SMTITFGPLADSTPNPRSSHMTS*VLSHGC
Trigger: ACACCCATGACTGAGGACCAATGACGTCATGTGGCT...GGATCGGGGGTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGATGGTCATCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTCACTGGATGCGCTCTTaGAAGGTCCCCACCTCGTCA +
Preference number: 5 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLHWMRS*KVPTSS
Trigger: TGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTG...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGGGGCGTGAATTGCAAAAGCCACATGACGTCATTGGTCCTCAGTCATGGGTGTGACTCCCCCAGCCCCTaGGCCTTCTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: GGVNCKSHMTSLVLSHGCDSPSP*AFFSLT
Trigger: TGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGAGTC...ACACCCATGACTGAGGACCAATGACGTCATGTGGCTTTTGCAATTCACGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGATCACCTTTGGGCCTTaGGCGGACTCCACCCCTAAC +
Preference number: 5 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGITFGP*ADSTPN
Trigger: GTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGAT...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTATCACCTTTGGGCCTTaGGCGGACTCCACCCCTAAC +
Preference number: 5 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLITFGP*ADSTPN
Trigger: GTTAGGGGTGGAGTCCGCCAAAGGCCCAAAGGTGAT...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGCAGGGGCCCCTCTACTaGGGCTGGCTCTTCATTAAG +
Preference number: 5 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGQGPLY*GWLFIK
Trigger: CTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCTG...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCCAGGGGCCCCTCTACTaGGGCTGGCTCTTCATTAAG +
Preference number: 5 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFQGPLY*GWLFIK
Trigger: CTTAATGAAGAGCCAGCCCAAGTAGAGGGGCCCCTG...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCTTTCTTAAGGCTCATTaGCCCCCTCCCCCACTCCCT +
Preference number: 5 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLFLKAH*PPPPLP
Trigger: AGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAAA...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCCCAGGTGGCCTGGACTaGAGGCAGAGGGTATCAAAG +
Preference number: 5 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFPGGLD*RQRVSK
Trigger: CTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGG...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp CTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGGACAGGCCACTGGATGCGCTCTTaGAAGGTCCCCACCTCGTCA +
Preference number: 5 (lower is better)
Translates to: LEAEGIKVPFFSVLRWTGHWMRS*KVPTSS
Trigger: TGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTG...GCCTGTCCACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGAACCAATGCTATACTGAAGTGTGAGGATCAGGGGCCCCTCTACTTGGGCTGGGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GTNAILKCEDQGPLYLGWASFPG*CNFPFS
Trigger: GGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGC...CCAGCCCAAGTAGAGGGGCCCCTGATCCTCACACTTCAGTATAGCATTGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTCACTGACAGCTTaGGTGCTTCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GDGNARWPGLEAEGIKVPFSLTA*VLLLWS
Trigger: GGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAA...AGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGGACTCCCCCAGCCCCTaGGCCTTCTTCTCACTGACA +
Preference number: 5 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLDSPSP*AFFSLT
Trigger: TGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGAGTC...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGGGGCGTGAATTGCAAAAGCCACATGACGTCATTGGTCCTCAGTCATGGGTGTCGCTATTTCTTATCCTaGCGAGACTCCCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: GGVNCKSHMTSLVLSHGCRYFLS*RDSPSP
Trigger: GGGGCTGGGGGAGTCTCGCAAGGATAAGAAATAGCG...ACACCCATGACTGAGGACCAATGACGTCATGTGGCTTTTGCAATTCACGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp ACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCTTCCGTTCTGCTGGGGGACTaGACAGCAGGCCGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: TECRKILRIPCGCSAASSVLLGD*TAGRSS
Trigger: GGAGCTCCGGCCTGCTGTCAAGTCCCCCAGCAGAAC...GGAAGAGGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTTGAGGGCGTTTTaGAGGCTGGTTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: DGNARWPGLEAEGIKVPFFLRAF*RLVLLG
Trigger: CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAA...GAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTAGGCCCATCATGTTCTaGAGGGCGTTTTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GDGNARWPGLEAEGIKVPRPIMF*RAFLRL
Trigger: CAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCT...AGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTAGCCACATGACGTCATaGGTCCTCAGTCATGGGTGT +
Preference number: 5 (lower is better)
Translates to: GDGNARWPGLEAEGIKVPSHMTS*VLSHGC
Trigger: ACACCCATGACTGAGGACCAATGACGTCATGTGGCT...AGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS TCA 90 bp TCTTATCCTTGCGAGACTCCCCCAGCCCCTTGGCCTTCTTCTCACTaGCAGCTTTGGTGCTTCTGCTGTGGTCCAGCATTGCATACAGCA +
Preference number: 5 (lower is better)
Translates to: SYPCETPPAPWPSSH*QLWCFCCGPALHTA
Trigger: TGCTGTATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGAGTCTCGCAAGGATAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000463290.5
ENST00000476410.1
ENST00000488271.1
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS-3UTR CAA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCTCGTCAATGTAGGGTaGTCCCTTGGCATAGTGGAA +
Preference number: 5 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVLVNVG*SLGIVE
Trigger: TTCCACTATGCCAAGGGACAACCCTACATTGACGAG...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTCACTGGATGCGCTCTTaGAAGGTCCCCACCTCGTCA +
Preference number: 5 (lower is better)
Translates to: SLVRVQAHHVLEGVFEAGHWMRS*KVPTSS
Trigger: TGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTG...ACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGCACTGGATGCGCTCTTaGAAGGTCCCCACCTCGTCA +
Preference number: 5 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWHWMRS*KVPTSS
Trigger: TGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTG...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GACCTGGAGTCCCAGAACAGTGCTCCAAAGTGGTCAGGGGGAACCAATGCTATAGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: DLESQNSAPKWSGGTNAIASFPG*CNFPFS
Trigger: GGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGC...TATAGCATTGGTTCCCCCTGACCACTTTGGAGCACTGTTCTGGGACTCCAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGTTCTCACTGACAGCTTaGGTGCTTCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGFSLTA*VLLLWS
Trigger: GGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAA...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGCGCTATTTCTTATCCTaGCGAGACTCCCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: LCSSFRSSISMTITFGPLRYFLS*RDSPSP
Trigger: GGGGCTGGGGGAGTCTCGCAAGGATAAGAAATAGCG...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GATGCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAAGGCCCATCATGTTCTaGAGGGCGTTTTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: DAGDGNARWPGLEAEGIKRPIMF*RAFLRL
Trigger: CAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCT...TTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTAGCCACATGACGTCATaGGTCCTCAGTCATGGGTGT +
Preference number: 5 (lower is better)
Translates to: EMGMPGGLDLRQRVSKSLSHMTS*VLSHGC
Trigger: ACACCCATGACTGAGGACCAATGACGTCATGTGGCT...AAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGCCAGGTGGCCTGGACTaGAGGCAGAGGGTATCAAAG +
Preference number: 5 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWPGGLD*RQRVSK
Trigger: CTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGG...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGCTCGTCAATGTAGGGTaGTCCCTTGGCATAGTGGAA +
Preference number: 5 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGLVNVG*SLGIVE
Trigger: TTCCACTATGCCAAGGGACAACCCTACATTGACGAG...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp CCCCTCCCCCACTCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCATGTCTGGAGGGTTTTaGACGTCACAAGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: PLPHSLTYEDPFSLSVSLMSGGF*TSQVNV
Trigger: CACGTTCACTTGTGACGTCAAAAACCCTCCAGACAT...GAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGAGTGGGGGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GCAGGAGATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCATGTCTGGAGGGTTTTaGACGTCACAAGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: AGDGNARWPGLEAEGIKVMSGGF*TSQVNV
Trigger: CACGTTCACTTGTGACGTCAAAAACCCTCCAGACAT...GACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCATCTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLASFPG*CNFPFS
Trigger: GGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGC...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp TCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTGCTGTGGTCCAGCATaGCATACAGCACTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: SLVRVQAHHVLEGVFEAGCCGPA*HTALAS
Trigger: AGACGCCAGTGCTGTATGCAATGCTGGACCACAGCA...ACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp CTCTGCTCATCCTTTCGTAGCTCCATCTCGATGACCATCACCTTTGGGCCTTTGTGCTGTGGTCCAGCATaGCATACAGCACTGGCGTCT +
Preference number: 5 (lower is better)
Translates to: LCSSFRSSISMTITFGPLCCGPA*HTALAS
Trigger: AGACGCCAGTGCTGTATGCAATGCTGGACCACAGCA...CAAAGGCCCAAAGGTGATGGTCATCGAGATGGAGCTACGAAAGGATGAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp GGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTTTCTCACTGACAGCTTaGGTGCTTCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GMPGGLDLRQRVSKSLSSFSLTA*VLLLWS
Trigger: GGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAA...AGAAGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGTTCTTGAGGGCGTTTTaGAGGCTGGTTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWFLRAF*RLVLLG
Trigger: CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAA...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp ATGGGAATGCCAGGTGGCCTGGACTTGAGGCAGAGGGTATCAAAGTCCCTTTCTCTCGTCAATGTAGGGTaGTCCCTTGGCATAGTGGAA +
Preference number: 5 (lower is better)
Translates to: MGMPGGLDLRQRVSKSLSLVNVG*SLGIVE
Trigger: TTCCACTATGCCAAGGGACAACCCTACATTGACGAG...AGAAAGGGACTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGGCATTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp GAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTGGGGATGTCTGGAGGGTTTTaGACGTCACAAGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: EFRPIMFLRAFLRLVLLGMSGGF*TSQVNV
Trigger: CACGTTCACTTGTGACGTCAAAAACCCTCCAGACAT...CCCCAGCAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp TCACTTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTTCTCACTGACAGCTTaGGTGCTTCTGCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: SLVRVQAHHVLEGVFEAGFSLTA*VLLLWS
Trigger: GGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAA...ACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGAGGCCCATCATGTTCTaGAGGGCGTTTTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLRPIMF*RAFLRL
Trigger: CAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCT...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGGCCCATCATGTTCTaGAGGGCGTTTTTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWRPIMF*RAFLRL
Trigger: CAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCT...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TCCCTGACCTATGAGGATCCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGCCACATGACGTCATaGGTCCTCAGTCATGGGTGT +
Preference number: 5 (lower is better)
Translates to: SLTYEDPFSLSVSLLKTWSHMTS*VLSHGC
Trigger: ACACCCATGACTGAGGACCAATGACGTCATGTGGCT...CCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGGATCCTCATAGGTCAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp ACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCTTCCCCAGGTGGCCTGGACTaGAGGCAGAGGGTATCAAAG +
Preference number: 5 (lower is better)
Translates to: TECRKILRIPCGCSAASSPGGLD*RQRVSK
Trigger: CTTTGATACCCTCTGCCTCAAGTCCAGGCCACCTGG...GGAAGAGGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp TTGTCCGAGTTCAGGCCCATCATGTTCTTGAGGGCGTTTTTGAGGCTGGTTCTGCTCGTCAATGTAGGGTaGTCCCTTGGCATAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LSEFRPIMFLRAFLRLVLLVNVG*SLGIVE
Trigger: TTCCACTATGCCAAGGGACAACCCTACATTGACGAG...CAGAACCAGCCTCAAAAACGCCCTCAAGAACATGATGGGCCTGAACTCGGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
CDS-3UTR CAA 90 bp CCATTCTCTCTCTCTGTCTCTCTCCTCAAGACCTGGAGTCCCAGAACAGTGCTCATGTCTGGAGGGTTTTaGACGTCACAAGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: PFSLSVSLLKTWSPRTVLMSGGF*TSQVNV
Trigger: CACGTTCACTTGTGACGTCAAAAACCCTCCAGACAT...GAGCACTGTTCTGGGACTCCAGGTCTTGAGGAGAGAGACAGAGAGAGAGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp CTTGAGGCAGAGGGTATCAAAGTCCCTTTCTTCTCAGTGCTCAGGTGGACAGGCATGTCTGGAGGGTTTTaGACGTCACAAGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: LEAEGIKVPFFSVLRWTGMSGGF*TSQVNV
Trigger: CACGTTCACTTGTGACGTCAAAAACCCTCCAGACAT...GCCTGTCCACCTGAGCACTGAGAAGAAAGGGACTTTGATACCCTCTGCCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS-3UTR CAA 90 bp ACAGAATGTAGAAAAATCCTAAGAATCCCCTGTGGCTGCAGTGCAGCCTCTTCCTTTCTTAAGGCTCATTaGCCCCCTCCCCCACTCCCT +
Preference number: 5 (lower is better)
Translates to: TECRKILRIPCGCSAASSFLKAH*PPPPLP
Trigger: AGGGAGTGGGGGAGGGGGCAAATGAGCCTTAAGAAA...GGAAGAGGCTGCACTGCAGCCACAGGGGATTCTTAGGATTTTTCTACATTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
CDS CAA 90 bp ACCCCTCACTGCTGCCCGGCGGCTCCCAGGGTTCTCCTTCCCATCTaGTCTAGGCCCCAAGTCCCGCTAACCTGCCGCCCGCGCTTCGAC +
Preference number: 6 (lower is better)
Translates to: TPHCCPAAPRVLLPI*SRPQVPLTCRPRFD
Trigger: GTCGAAGCGCGGGCGGCAGGTTAGCGGGACTTGGGGCCTAGACAAGATGGGAAGGAGAACCCTGGGAGCCGCCGGGCAGCAGTGAGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS GCA 72 bp CTTCCCATCTTGTCTAGGCCCCAAGTCCCGCTAACCTaGCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTTG +
Preference number: 6 (lower is better)
Translates to: LPILSRPQVPLT*RPRFDASFPGL
Trigger: CAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGGTTAGCGGGACTTGGGGCCTAGACAAGATGGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS CAA 90 bp AGCACTGGCGTCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCCATAGCACTGAGCCTCCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: STGVCRPRFDASFPG*CNFPFSIALSLLCR
Trigger: CCTGCAGAGGAGGCTCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGACGCCAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CAA 90 bp GTCCCGCTAACCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCCATAGCACTGAGCCTCCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VPLTCRPRFDASFPG*CNFPFSIALSLLCR
Trigger: CCTGCAGAGGAGGCTCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGGTTAGCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS CCA 72 bp CTGCTGTGGTCCAGCATTGCATACAGCACTGGCGTCTaGGGGAGGGGCGCACACATCAGTCACCGAGCGACT +
Preference number: 6 (lower is better)
Translates to: LLWSSIAYSTGV*GRGAHISHRAT
Trigger: AGTCGCTCGGTGACTGATGTGTGCGCCCCTCCCCCAGACGCCAGTGCTGTATGCAATGCTGGACCACAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS CCA 72 bp GGTGCTTCTGCTGTGGTCCAGCATTGCATACAGCACTaGCGTCTGGGGGAGGGGCGCACACATCAGTCACCG +
Preference number: 6 (lower is better)
Translates to: GASAVVQHCIQH*RLGEGRTHQSP
Trigger: CGGTGACTGATGTGTGCGCCCCTCCCCCAGACGCCAGTGCTGTATGCAATGCTGGACCACAGCAGAAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS TCA 72 bp TGGCATCTCTGCCCCCTTCGGGCTGGTAGCGCCAGGTaGAGGAGATGTCATCTGAGACCCACTCACTGGACC +
Preference number: 6 (lower is better)
Translates to: WHLCPLRAGSAR*RRCHLRPTHWT
Trigger: GGTCCAGTGAGTGGGTCTCAGATGACATCTCCTTCACCTGGCGCTACCAGCCCGAAGGGGGCAGAGATGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CCA 72 bp TGGCGTCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTTCTCCATAGCACTGAG +
Preference number: 6 (lower is better)
Translates to: WRLPPALRRVLS*LVQFPLLHSTE
Trigger: CTCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CCA 72 bp TGGCGTCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTTCTCCATAGCACTGCA +
Preference number: 6 (lower is better)
Translates to: WRLPPALRRVLS*LVQFPLLHSTA
Trigger: TGCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488271.1
CDS CCA 72 bp CAGCACCATGGACCTCCCTGTCGGTGTAAACCACGATaGCCTGGGCCGGGGACAGCACTGCAAGCACAAAGT +
Preference number: 6 (lower is better)
Translates to: QHHGPPCRCKPR*PGPGTALQAQS
Trigger: ACTTTGTGCTTGCAGTGCTGTCCCCGGCCCAGGCCATCGTGGTTTACACCGACAGGGAGGTCCATGGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491222.5
ENST00000672287.2
CDS CAA 72 bp GTCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCCATAGCACTGAGCCTC +
Preference number: 6 (lower is better)
Translates to: VCRPRFDASFPG*CNFPFSIALSL
Trigger: GAGGCTCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CAA 72 bp ACCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCCATAGCACTGAGCCTC +
Preference number: 6 (lower is better)
Translates to: TCRPRFDASFPG*CNFPFSIALSL
Trigger: GAGGCTCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS TCA 72 bp TCCAGCGAGGGTCCCCTACCCACTGGATGCGCTCTTTaGAGGTCCCCACCTCGTCAATGTAGGGTTGTCCCT +
Preference number: 6 (lower is better)
Translates to: SSEGPLPTGCAL*RSPPRQCRVVP
Trigger: AGGGACAACCCTACATTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCCTCGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS GCA 72 bp ACTGACAGCTTTGGTGCTTCTGCTGTGGTCCAGCATTaGATACAGCACTGGCGTCTGCCGCCCGCGCTTCGA +
Preference number: 6 (lower is better)
Translates to: TDSFGASAVVQH*IQHWRLPPALR
Trigger: TCGAAGCGCGGGCGGCAGACGCCAGTGCTGTATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTGTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000463290.5
ENST00000488271.1
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS GCA 72 bp ACTGACAGCTTTGGTGCTTCTGCTGTGGTCCAGCATTaGATACAGCACTGGCGTCTGGGGGAGGGGCGCACA +
Preference number: 6 (lower is better)
Translates to: TDSFGASAVVQH*IQHWRLGEGRT
Trigger: TGTGCGCCCCTCCCCCAGACGCCAGTGCTGTATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTGTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS CCA 72 bp CAGCACCATGGACCTCCCTGTCGGTGTAAACCACGATaGCCTGGGCCGGGGACAGCACCAAAGAAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: QHHGPPCRCKPR*PGPGTAPKKRR
Trigger: TCTTCTCTTCTTTGGTGCTGTCCCCGGCCCAGGCCATCGTGGTTTACACCGACAGGGAGGTCCATGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463290.5
ENST00000526189.3
ENST00000533357.5
ENST00000672602.2
ENST00000674861.1
CDS CCA 72 bp ATGGAGCCATCCTTCCAGCGAGGGTCCCCTACCCACTaGATGCGCTCTTTGAAGGTCCCCACCTCGTCAATG +
Preference number: 6 (lower is better)
Translates to: MEPSFQRGSPTH*MRSLKVPTSSM
Trigger: CATTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCCTCGCTGGAAGGATGGCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CCA 72 bp GCTAACCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTaGCTTGTGCAATTTCCCCTTCTCCATAGCACTGAG +
Preference number: 6 (lower is better)
Translates to: ANLPPALRRVLS*LVQFPLLHSTE
Trigger: CTCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGGTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS CAA 90 bp AGCACTGGCGTCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCCATAGCACTGCAAGAAGAGAGACTG +
Preference number: 6 (lower is better)
Translates to: STGVCRPRFDASFPG*CNFPFSIALQEERL
Trigger: CAGTCTCTCTTCTTGCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGACGCCAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488271.1
CDS CAA 90 bp TTGCGAGACTCCCCCAGCCCCTTGGCCTTCTTCTCACTGACAGCTTaGGTGCTTCTGCTGTGGTCCAGCATTGCATACAGCACTGGCGTC +
Preference number: 6 (lower is better)
Translates to: LRDSPSPLAFFSLTA*VLLLWSSIAYSTGV
Trigger: GACGCCAGTGCTGTATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGAGTCTCGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000463290.5
ENST00000476410.1
ENST00000488271.1
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CAA 72 bp GTCTGCCGCCCGCGCTTCGACGCGTCCTTTCCTGGCTaGTGCAATTTCCCCTTCTCCATAGCACTGCAAGAA +
Preference number: 6 (lower is better)
Translates to: VCRPRFDASFPG*CNFPFSIALQE
Trigger: TTCTTGCAGTGCTATGGAGAAGGGGAAATTGCACAAGCCAGGAAAGGACGCGTCGAAGCGCGGGCGGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488271.1
CDS CAA 90 bp CCCGCTAACCGCTATTTCTTATCCTTGCGAGACTCCCCCAGCCCCTaGGCCTTCTTCTCACTGACAGCTTTGGTGCTTCTGCTGTGGTCC +
Preference number: 6 (lower is better)
Translates to: PANRYFLSLRDSPSP*AFFSLTALVLLLWS
Trigger: GGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGAGTCTCGCAAGGATAAGAAATAGCGGTTAGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000463290.5
ENST00000476410.1
ENST00000488271.1
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CCA 72 bp GCCTTCTTCTCACTGACAGCTTTGGTGCTTCTGCTGTaGTCCAGCATTGCATACAGCACTGGCGTCTGCCGC +
Preference number: 6 (lower is better)
Translates to: AFFSLTALVLLL*SSIAYSTGVCR
Trigger: GCGGCAGACGCCAGTGCTGTATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000463290.5
ENST00000488271.1
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CCA 72 bp GCCTTCTTCTCACTGACAGCTTTGGTGCTTCTGCTGTaGTCCAGCATTGCATACAGCACTGGCGTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: AFFSLTALVLLL*SSIAYSTGVWG
Trigger: CCCCCAGACGCCAGTGCTGTATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476410.1
CDS CAA 72 bp TCCCCCAGCCCCTTGGCCTTCTTCTCACTGACAGCTTaGGTGCTTCTGCTGTGGTCCAGCATTGCATACAGC +
Preference number: 6 (lower is better)
Translates to: SPSPLAFFSLTA*VLLLWSSIAYS
Trigger: GCTGTATGCAATGCTGGACCACAGCAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000463290.5
ENST00000476410.1
ENST00000488271.1
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CAA 90 bp CCACTGGATGCGCTCTTTGAAGGTCCCCACCTCGTCAATGTAGGGTaGTCCCTTGGCATAGTGGAAGATCGAAATGGCATCTCTGCCCCC +
Preference number: 6 (lower is better)
Translates to: PLDALFEGPHLVNVG*SLGIVEDRNGISAP
Trigger: GGGGGCAGAGATGCCATTTCGATCTTCCACTATGCCAAGGGACAACCCTACATTGACGAGGTGGGGACCTTCAAAGAGCGCATCCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CAA 72 bp CGCTATTTCTTATCCTTGCGAGACTCCCCCAGCCCCTaGGCCTTCTTCTCACTGACAGCTTTGGTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: RYFLSLRDSPSP*AFFSLTALVLL
Trigger: CAGAAGCACCAAAGCTGTCAGTGAGAAGAAGGCCAAGGGGCTGGGGGAGTCTCGCAAGGATAAGAAATAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000463290.5
ENST00000476410.1
ENST00000488271.1
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS CAA 72 bp GCGCTCTTTGAAGGTCCCCACCTCGTCAATGTAGGGTaGTCCCTTGGCATAGTGGAAGATCGAAATGGCATC +
Preference number: 6 (lower is better)
Translates to: ALFEGPHLVNVG*SLGIVEDRNGI
Trigger: GATGCCATTTCGATCTTCCACTATGCCAAGGGACAACCCTACATTGACGAGGTGGGGACCTTCAAAGAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000526189.3
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1
CDS TCA 72 bp CTAGTTGGCACTTTTTCAAAGACATACAGCGTGACCTaGGAGGTCTTGCCCACTATGTCTGGAGGGTTTTTG +
Preference number: 6 (lower is better)
Translates to: LVGTFSKTYSVT*EVLPTMSGGFL
Trigger: CAAAAACCCTCCAGACATAGTGGGCAAGACCTCTCAGGTCACGCTGTATGTCTTTGAAAAAGTGCCAACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000463290.5
ENST00000491222.5
ENST00000533357.5
ENST00000672287.2
ENST00000672602.2
ENST00000674861.1