RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPV17L (Homo sapiens)

Ensembl gene IDs: ENSG00000156968, ENSG00000275543

Ensembl transcript IDs: ENST00000287594.7, ENST00000396385.4, ENST00000612041.2

Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGGGAGGCTGACGCAGAATGGCGTGAACCCGGGAGGCGGAGCTTaGAGTGAGCCGAGATCTCACAACTGCATTCCAGCCTGGGCGACA +
Preference number: 1 (lower is better)
Translates to: LGRLTQNGVNPGGGA*SEPRSHNCIPAWAT
Trigger: TGTCGCCCAGGCTGGAATGCAGTTGTGAGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTGCGTCAGCCTCCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR CCA 90 bp AAAATTAGTGGGTCATGGTGGCGGGCGCCTTTAGTCCCTGCTACTTaGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGACAGAGGTTG +
Preference number: 1 (lower is better)
Translates to: KISGSWWRAPLVPAT*AEAGEWREPGRQRL
Trigger: CAACCTCTGTCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCCAAGTAGCAGGGACTAAAGGCGCCCGCCACCATGACCCACTAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR TCA 90 bp ATCTGGATGTATATGTGCAGGTCACTGGGATATGATGGCTTAGCTTaGGCTCAGAGGACGGACAGAGACCAGCCTAGCCAACATGGCAAA +
Preference number: 1 (lower is better)
Translates to: IWMYMCRSLGYDGLA*AQRTDRDQPSQHGK
Trigger: TTTGCCATGTTGGCTAGGCTGGTCTCTGTCCGTCCTCTGAGCTCAAGCTAAGCCATCATATCCCAGTGACCTGCACATATACATCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTaGATCTTCAGTAACTTCAGGCCATCTGGATGTATATGTGCAGGT +
Preference number: 1 (lower is better)
Translates to: ITMVQCHQLRLFSLL*IFSNFRPSGCICAG
Trigger: ACCTGCACATATACATCCAGATGGCCTGAAGTTACTGAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR TCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCGGATGGAGGCTGCAGTaGGCCGCGATCGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATGWRLQ*AAIVPL
Trigger: CAGTGGCACGATCGCGGCTCACTGCAGCCTCCATCC...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCCCAGAGGATGGAGGCTaGAGTGAGCCGCGATCGTGC +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATPEDGG*SEPRSC
Trigger: GCACGATCGCGGCTCACTGCAGCCTCCATCCTCTGG...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACCGGGAGGCGGAGCTTaGAGTGAGCCGAGATCTCAC +
Preference number: 2 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTPGGGA*SEPRSH
Trigger: GTGAGATCTCGGCTCACTGCAAGCTCCGCCTCCCGG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCGGAGGCCGAGGTGGGTaGATTATGCGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATGGRGG*IMRSGD
Trigger: ATCTCCTGACCGCATAATCCACCCACCTCGGCCTCC...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTTTGGGAGGCCGAGGTaGGTGGATTATGCGGTCAGG +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATFGRPR*VDYAVR
Trigger: CCTGACCGCATAATCCACCCACCTCGGCCTCCCAAA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR TCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGGGATGGAGGCTGCAGTaGGCCGCGATCGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLGWRLQ*AAIVPL
Trigger: CAGTGGCACGATCGCGGCTCACTGCAGCCTCCATCC...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
3UTR-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCAGTGAGCCGAAATCATaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATSEPKS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGATTTCGGCTCACT...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR GCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGCCAGAGGATGGAGGCTaGAGTGAGCCGCGATCGTGC +
Preference number: 2 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLPEDGG*SEPRSC
Trigger: GCACGATCGCGGCTCACTGCAGCCTCCATCCTCTGG...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
3UTR-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCGAGGTGGGTGGATTATaGGGTCAGGAGATCAAGACC +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATEVGGL*GQEIKT
Trigger: GGTCTTGATCTCCTGACCGCATAATCCACCCACCTC...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCCCAGGAGACAGAGGTTaGAGTGAGCCGAAATCATGC +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATPGDRG*SEPKSC
Trigger: GCATGATTTCGGCTCACTGCAACCTCTGTCTCCTGG...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAGGAGGCCGAGGTGGGTaGATTATGCGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTGGRGG*IMRSGD
Trigger: ATCTCCTGACCGCATAATCCACCCACCTCGGCCTCC...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR TCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAGGCAGGAGAATTGCTTaGACCCAGAGGATGGAGGCT +
Preference number: 2 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTGRRIA*TQRMEA
Trigger: AGCCTCCATCCTCTGGGTTCAAGCAATTCTCCTGCC...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR TCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTATGATGGCTTAGCTTaGGCTCAGAGGACGGACAGA +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATYDGLA*AQRTDR
Trigger: TCTGTCCGTCCTCTGAGCTCAAGCTAAGCCATCATA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCCTGAGGCAGGAGAATTaGTTGAACCCAGAGGATGGA +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATLRQEN*LNPEDG
Trigger: TCCATCCTCTGGGTTCAAGCAATTCTCCTGCCTCAG...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAAGTGAGCCGAAATCATaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTSEPKS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGATTTCGGCTCACT...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAGTAGTCCCAGCTACTTaGGAGGCTGACGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTVVPAT*EADAEW
Trigger: CCATTCTGCGTCAGCCTCCCAAGTAGCTGGGACTAC...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR CAA 90 bp GGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCAAACGGGCTTaGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: GDCLTCPCEEATKRA*YEQHGCLFHLSAGG
Trigger: CCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCCGTTTGGTGGCCTCTTCACACGGACACGTGAGACAGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612041.2
3UTR-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCAATACAAAAATCAGCTaGGCCTGGTGTCACGTGCCT +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATNTKIS*AWCHVP
Trigger: AGGCACGTGACACCAGGCCCAGCTGATTTTTGTATT...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCAGGTTTGGGGATAGGTaGTGGAGTTTGGAGCAATGT +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATRFGDR*WSLEQC
Trigger: ACATTGCTCCAAACTCCACCACCTATCCCCAAACCT...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR CAA 90 bp GGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCAAACAGGCTTaGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: GDCLTCPCEEATKQA*YEQHGCLFHLSAGG
Trigger: CCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTGTTTGGTGGCCTCTTCACACGGACACGTGAGACAGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
3UTR-3UTR TCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTCCTGGCCAACACGGTaGAACTTCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATSWPTR*NFISTK
Trigger: TTTAGTAGAGATGAAGTTTCACCGTGTTGGCCAGGA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR GCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGGAGGTGGGTGGATTATaGGGTCAGGAGATCAAGACC +
Preference number: 2 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLEVGGL*GQEIKT
Trigger: GGTCTTGATCTCCTGACCGCATAATCCACCCACCTC...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
3UTR-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCATTGATCAGTTAGGGTaGGGCAGTAACATATCACAA +
Preference number: 2 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATIDQLG*GSNISQ
Trigger: TTGTGATATGTTACTGCCCCACCCTAACTGATCAAT...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAATTGATCAGTTAGGGTaGGGCAGTAACATATCACAA +
Preference number: 2 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTIDQLG*GSNISQ
Trigger: TTGTGATATGTTACTGCCCCACCCTAACTGATCAAT...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAGTACATTCTCAAGGGTaGGGAGAATTAAAAAGAACC +
Preference number: 2 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTVHSQG*GELKRT
Trigger: GGTTCTTTTTAATTCTCCCCACCCTTGAGAATGTAC...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACTATTTTCACTTCTGTaGATCTTCAGTAACTTCAGG +
Preference number: 2 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTLFSLL*IFSNFR
Trigger: CCTGAAGTTACTGAAGATCCACAGAAGTGAAAATAG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGATTGATCAGTTAGGGTaGGGCAGTAACATATCACAA +
Preference number: 2 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLIDQLG*GSNISQ
Trigger: TTGTGATATGTTACTGCCCCACCCTAACTGATCAAT...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
3UTR-3UTR TCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCGGCAGGAGAATTGCTTaGACCCAGAGGATGGAGGCT +
Preference number: 2 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFGRRIA*TQRMEA
Trigger: AGCCTCCATCCTCTGGGTTCAAGCAATTCTCCTGCC...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCAGTGAGCCGAAATCATaGCACTGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFSEPKS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGATTTCGGCTCACT...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCGTAGTCCCAGCTACTTaGGAGGCTGACGCAGAATGG +
Preference number: 2 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFVVPAT*EADAEW
Trigger: CCATTCTGCGTCAGCCTCCCAAGTAGCTGGGACTAC...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGCTATTTTCACTTCTGTaGATCTTCAGTAACTTCAGG +
Preference number: 2 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLLFSLL*IFSNFR
Trigger: CCTGAAGTTACTGAAGATCCACAGAAGTGAAAATAG...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
3UTR-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCGAGGTGGGTGGATTATaGGGTCAGGAGATCAAGACC +
Preference number: 2 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFEVGGL*GQEIKT
Trigger: GGTCTTGATCTCCTGACCGCATAATCCACCCACCTC...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCCAGGAGACAGAGGTTaGAGTGAGCCGAAATCATGC +
Preference number: 2 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFPGDRG*SEPKSC
Trigger: GCATGATTTCGGCTCACTGCAACCTCTGTCTCCTGG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCTGAGGCAGGAGAATTaGTTGAACCCAGAGGATGGA +
Preference number: 2 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFLRQEN*LNPEDG
Trigger: TCCATCCTCTGGGTTCAAGCAATTCTCCTGCCTCAG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR CCA 72 bp GGGTCATGGTGGCGGGCGCCTTTAGTCCCTGCTACTTaGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGA +
Preference number: 3 (lower is better)
Translates to: GSWWRAPLVPAT*AEAGEWREPGR
Trigger: TCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCCAAGTAGCAGGGACTAAAGGCGCCCGCCACCATGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR GCA 72 bp CTGACGCAGAATGGCGTGAACCCGGGAGGCGGAGCTTaGAGTGAGCCGAGATCTCACAACTGCATTCCAGCC +
Preference number: 3 (lower is better)
Translates to: LTQNGVNPGGGA*SEPRSHNCIPA
Trigger: GGCTGGAATGCAGTTGTGAGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTGCGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CAA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCAGGCAGGAGAATTGCTaGAACCCAGAGGATGGAGGC +
Preference number: 3 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATRQENC*NPEDGG
Trigger: GCCTCCATCCTCTGGGTTCAAGCAATTCTCCTGCCT...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CAA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAAGGCAGGAGAATTGCTaGAACCCAGAGGATGGAGGC +
Preference number: 3 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTRQENC*NPEDGG
Trigger: GCCTCCATCCTCTGGGTTCAAGCAATTCTCCTGCCT...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR GCA 72 bp ATTCATCTTCTGCCTCCTGAGCTCGAGAGATCCTCCTaGATGAGTCTTCCAAGTAGCTGGGACTACAGGCTC +
Preference number: 3 (lower is better)
Translates to: IHLLPPELERSS*MSLPSSWDYRL
Trigger: GAGCCTGTAGTCCCAGCTACTTGGAAGACTCATGCAGGAGGATCTCTCGAGCTCAGGAGGCAGAAGATGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR TCA 72 bp TATATGTGCAGGTCACTGGGATATGATGGCTTAGCTTaGGCTCAGAGGACGGACAGAGACCAGCCTAGCCAA +
Preference number: 3 (lower is better)
Translates to: YMCRSLGYDGLA*AQRTDRDQPSQ
Trigger: TTGGCTAGGCTGGTCTCTGTCCGTCCTCTGAGCTCAAGCTAAGCCATCATATCCCAGTGACCTGCACATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR TCA 72 bp GGCCATCTGGATGTATATGTGCAGGTCACTGGGATATaGTGGCTTAGCTTGAGCTCAGAGGACGGACAGAGA +
Preference number: 3 (lower is better)
Translates to: GHLDVYVQVTGI*WLSLSSEDGQR
Trigger: TCTCTGTCCGTCCTCTGAGCTCAAGCTAAGCCATCATATCCCAGTGACCTGCACATATACATCCAGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR CCA 72 bp GGCAGGGGTGGATCTCACAAAGTACATTCTCAAGGGTaGGGAGAATTAAAAAGAACCTTCTTAAGGGTGGGA +
Preference number: 3 (lower is better)
Translates to: GRGGSHKVHSQG*GELKRTFLRVG
Trigger: TCCCACCCTTAAGAAGGTTCTTTTTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR-3UTR CAA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCAGGCAGGAGAATTGCTaGAACCCAGAGGATGGAGGC +
Preference number: 3 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFRQENC*NPEDGG
Trigger: GCCTCCATCCTCTGGGTTCAAGCAATTCTCCTGCCT...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR CCA 72 bp GGTGGGAGGATTACAAAGTACATTGATCAGTTAGGGTaGGGCAGTAACATATCACAATGGTGCAATGTCATC +
Preference number: 3 (lower is better)
Translates to: GGRITKYIDQLG*GSNISQWCNVI
Trigger: GATGACATTGCACCATTGTGATATGTTACTGCCCCACCCTAACTGATCAATGTACTTTGTAATCCTCCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
3UTR CCA 72 bp GTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTaGATCTTCAGTAACTTCAGGCCATCTGGATGTATA +
Preference number: 3 (lower is better)
Translates to: VQCHQLRLFSLL*IFSNFRPSGCI
Trigger: TATACATCCAGATGGCCTGAAGTTACTGAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTGGTCGGCGTCTTCCTaGACCGGGTCCGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATWSASS*TGSGPP
Trigger: GGGAGGCCCGGACCCGGTGCAGGAAGACGCCGACCA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTTGGCCTCGCGGCCCTaGAGCCGCTGTTGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATLASRP*SRCCSA
Trigger: CGCGCTGCAACAGCGGCTGCAGGGCCGCGAGGCCAA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCAGCCTCCAGAGCAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATSLQSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTGCTCTGGAGGCT...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCCCGGGAGGCGGAGCTTaGAGTGAGCCGAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATPGGGA*SEPRSH
Trigger: GTGAGATCTCGGCTCACTGCAAGCTCCGCCTCCCGG...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAGGATGGAGGCTGCAGTaGGCCGCGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTGWRLQ*AAIVPL
Trigger: CAGTGGCACGATCGCGGCTCACTGCAGCCTCCATCC...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCACTCCTGGGCTCAGATaGTCCACCTGCCTTCGCCTC +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATTPGLR*STCLRL
Trigger: GAGGCGAAGGCAGGTGGATCATCTGAGCCCAGGAGT...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCGTGATCTCGGCTCACTaGAACCTCCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATVISAH*NLHLLG
Trigger: GCCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCAC...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCCCGGGAGACAGAGGTTaGAGTGAGGCGAGATCGCGA +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATPGDRG*SEARSR
Trigger: TCGCGATCTCGCCTCACTGCAACCTCTGTCTCCCGG...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCGCACCCCCAAGTAGCTaGGAGGACAGGTGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATAPPSS*EDRCKP
Trigger: TGGCTTGCACCTGTCCTCCCAGCTACTTGGGGGTGC...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTGGAGTGCAGTGGCCTaGTCTCTGCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATWSAVA*SLLTAS
Trigger: GCTTGCAGTGAGCAGAGATCAGGCCACTGCACTCCA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAACTCCTGAGCTCAAGTaGTCCGCCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTTPELK*SARLGL
Trigger: GAGGCCAAGGCGGGCGGATCACTTGAGCTCAGGAGT...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACCTCCTGGGCTTGAGTaGTCCTCCTGCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTPPGLE*SSCLST
Trigger: GGTGCTGAGGCAGGAGGATCACTCAAGCCCAGGAGG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTTGCCCTTCCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATLPFLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGGAAGGGCAA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCGGCAGGAGAATTGCTTaGACCCAGAGGATGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATGRRIA*TQRMEA
Trigger: AGCCTCCATCCTCTGGGTTCAAGCAATTCTCCTGCC...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCATGGTCTCGATCTCCTaGCCTTGTGATCCAACCGCC +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATMVSIS*PCDPTA
Trigger: GGCGGTTGGATCACAAGGTCAGGAGATCGAGACCAT...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTCATCTTCTGCCTCCTaGGCTCGAGAGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATSSSAS*AREILL
Trigger: CAGGAGGATCTCTCGAGCTCAGGAGGCAGAAGATGA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTGGCCATGCTGGTCTTaGACTCCTGACCTCAACCGA +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATWPCWS*TPDLNR
Trigger: TCGGTTGAGGTCAGGAGTTCAAGACCAGCATGGCCA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACTGATCTCTGCTCACTaGAAGCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTLISAH*KLRLPG
Trigger: ACCCGGGAGGCGGAGCTTGCAGTGAGCAGAGATCAG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAGTGATCTCGGCTCACTaGAACCTCCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTVISAH*NLHLLG
Trigger: GCCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCAC...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACCGGGAGACAGAGGTTaGAGTGAGGCGAGATCGCGA +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTPGDRG*SEARSR
Trigger: TCGCGATCTCGCCTCACTGCAACCTCTGTCTCCCGG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCGTTGAGGCCAGGAGTTaGAGACTGTCTCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATVEARS*RLSHVS
Trigger: GGACACGTGAGACAGTCTCCAACTCCTGGCCTCAAC...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGACTCCTGAGCTCAAGTaGTCCGCCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLTPELK*SARLGL
Trigger: GAGGCCAAGGCGGGCGGATCACTTGAGCTCAGGAGT...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACATCGCCTAGGCTGGAGTaGAGTGGCCTGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTSPRLE*SGLISA
Trigger: AGCAGAGATCAGGCCACTGCACTCCAGCCTAGGCGA...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCACAGTCTTGCTCTGTTaGCCTTCCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATTVLLC*PSWSAV
Trigger: CACTGCACTCCAGGAAGGGCAACAGAGCAAGACTGT...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTTAGTCCCTGCTACTTaGGCTGAGGCAGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATLVPAT*AEAGEW
Trigger: CCATTCTCCTGCCTCAGCCCAAGTAGCAGGGACTAA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAATGGTCTCGATCTCCTaGCCTTGTGATCCAACCGCC +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTMVSIS*PCDPTA
Trigger: GGCGGTTGGATCACAAGGTCAGGAGATCGAGACCAT...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGACTCCTGGGCTCAGATaGTCCACCTGCCTTCGCCTC +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLTPGLR*STCLRL
Trigger: GAGGCGAAGGCAGGTGGATCATCTGAGCCCAGGAGT...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR TCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACATGGCCATGCTGGTCTTaGACTCCTGACCTCAACCGA +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTWPCWS*TPDLNR
Trigger: TCGGTTGAGGTCAGGAGTTCAAGACCAGCATGGCCA...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAAGCCACCTGAGTAGCTaGGACTACAGGACGCACTAC +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTSHLSS*DYRTHY
Trigger: GTAGTGCGTCCTGTAGTCTCAGCTACTCAGGTGGCT...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACCTGTCTCAGCCACCTaGGTAGCTGAGACTACAGGA +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTPVSAT*VAETTG
Trigger: TCCTGTAGTCTCAGCTACTCAGGTGGCTGAGACAGG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGGTGATCTCGGCTCACTaGAACCTCCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLVISAH*NLHLLG
Trigger: GCCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATCAC...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAGTTGAGGCCAGGAGTTaGAGACTGTCTCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTVEARS*RLSHVS
Trigger: GGACACGTGAGACAGTCTCCAACTCCTGGCCTCAAC...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCCCACATTGCCCAAGTTaGTCTCAAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATPHCPS*SQTPEL
Trigger: GAGCTCAGGAGTTTGAGACCAACTTGGGCAATGTGG...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGGCACCCCCAAGTAGCTaGGAGGACAGGTGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLAPPSS*EDRCKP
Trigger: TGGCTTGCACCTGTCCTCCCAGCTACTTGGGGGTGC...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR TCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGAGACAGAGGTTGCAGTaGGGCGAGATCGCGACACTG +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLRQRLQ*GEIATL
Trigger: CAGTGTCGCGATCTCGCCTCACTGCAACCTCTGTCT...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR TCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTCCTGGCTAACACAGTaGAACCCCGACTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATSWLTQ*NPDSTK
Trigger: TTTAGTAGAGTCGGGGTTTCACTGTGTTAGCCAGGA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACATTCATGCAATTCTCCTaGCTCAGCCTCCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTFMQFS*LSLQSS
Trigger: GCTGCTCTGGAGGCTGAGGCAGGAGAATTGCATGAA...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGTCGCCTAGGCTGGAGTaGAGTGGCCTGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLSPRLE*SGLISA
Trigger: AGCAGAGATCAGGCCACTGCACTCCAGCCTAGGCGA...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR GCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGTTGCCCTTCCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLLPFLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGGAAGGGCAA...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAACAGTCTTGCTCTGTTaGCCTTCCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTTVLLC*PSWSAV
Trigger: CACTGCACTCCAGGAAGGGCAACAGAGCAAGACTGT...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGGGAGGCCGAGGTGGGTaGATTATGCGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLGGRGG*IMRSGD
Trigger: ATCTCCTGACCGCATAATCCACCCACCTCGGCCTCC...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGTTTGGGAGGCCGAGGTaGGTGGATTATGCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLFGRPR*VDYAVR
Trigger: CCTGACCGCATAATCCACCCACCTCGGCCTCCCAAA...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACTGGTCTCAAACTCCTaGGCTCAGATGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTLVSNS*AQMIHL
Trigger: CAGGTGGATCATCTGAGCCCAGGAGTTTGAGACCAG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACATATGATGGCTTAGCTTaGGCTCAGAGGACGGACAGA +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTYDGLA*AQRTDR
Trigger: TCTGTCCGTCCTCTGAGCTCAAGCTAAGCCATCATA...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGTGGCCATGCTGGTCTTaGACTCCTGACCTCAACCGA +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLWPCWS*TPDLNR
Trigger: TCGGTTGAGGTCAGGAGTTCAAGACCAGCATGGCCA...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR TCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGAGCCACCTGAGTAGCTaGGACTACAGGACGCACTAC +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLSHLSS*DYRTHY
Trigger: GTAGTGCGTCCTGTAGTCTCAGCTACTCAGGTGGCT...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR TCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGCCTGTCTCAGCCACCTaGGTAGCTGAGACTACAGGA +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLPVSAT*VAETTG
Trigger: TCCTGTAGTCTCAGCTACTCAGGTGGCTGAGACAGG...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACTGAGGCAGGAGAATTaGTTGAACCCAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTLRQEN*LNPEDG
Trigger: TCCATCCTCTGGGTTCAAGCAATTCTCCTGCCTCAG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCAGGCTCACACCACCATaGTTGGCTAATTTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATRLTPP*LANFCR
Trigger: CCTACAAAAATTAGCCAAGCATGGTGGTGTGAGCCT...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACTCGAGAGATCCTCCTaGATGAGTCTTCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTLERSS*MSLPSS
Trigger: GCTACTTGGAAGACTCATGCAGGAGGATCTCTCGAG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAGCTCACTACAACCTATaGCTCCCAGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTAHYNL*LPGSSD
Trigger: ATCGCTTGAACCTGGGAGGCATAGGTTGTAGTGAGC...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAAGTCTTCCAAGTAGCTaGGACTACAGGCTCACACCA +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTSLPSS*DYRLTP
Trigger: TGGTGTGAGCCTGTAGTCCCAGCTACTTGGAAGACT...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTGGTCGGCGTCTTCCTaGACCGGGTCCGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFWSASS*TGSGPP
Trigger: GGGAGGCCCGGACCCGGTGCAGGAAGACGCCGACCA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTTGGCCTCGCGGCCCTaGAGCCGCTGTTGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFLASRP*SRCCSA
Trigger: CGCGCTGCAACAGCGGCTGCAGGGCCGCGAGGCCAA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGACAGTCTTGCTCTGTTaGCCTTCCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLTVLLC*PSWSAV
Trigger: CACTGCACTCCAGGAAGGGCAACAGAGCAAGACTGT...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAAATACAAAAATCAGCTaGGCCTGGTGTCACGTGCCT +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTNTKIS*AWCHVP
Trigger: AGGCACGTGACACCAGGCCCAGCTGATTTTTGTATT...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTTTGGGGATAGGTGGTaGAGTTTGGAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATFGDRW*SLEQCF
Trigger: AAAACATTGCTCCAAACTCCACCACCTATCCCCAAA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAAGGTTTGGGGATAGGTaGTGGAGTTTGGAGCAATGT +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTRFGDR*WSLEQC
Trigger: ACATTGCTCCAAACTCCACCACCTATCCCCAAACCT...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGCTGGTCTCAAACTCCTaGGCTCAGATGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLLVSNS*AQMIHL
Trigger: CAGGTGGATCATCTGAGCCCAGGAGTTTGAGACCAG...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGTTAGTCCCTGCTACTTaGGCTGAGGCAGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLLVPAT*AEAGEW
Trigger: CCATTCTCCTGCCTCAGCCCAAGTAGCAGGGACTAA...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR TCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACATCCTGGCCAACACGGTaGAACTTCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTSWPTR*NFISTK
Trigger: TTTAGTAGAGATGAAGTTTCACCGTGTTGGCCAGGA...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGGGGATCTTGCTGTATTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLGILLY*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAATACAGCAAGATCCC...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR GCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGGCTCACTACAACCTATaGCTCCCAGGTTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLAHYNL*LPGSSD
Trigger: ATCGCTTGAACCTGGGAGGCATAGGTTGTAGTGAGC...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCGTACATTCTCAAGGGTaGGGAGAATTAAAAAGAACC +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATVHSQG*GELKRT
Trigger: GGTTCTTTTTAATTCTCCCCACCCTTGAGAATGTAC...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGATAATCCCAGCACCTTaGGAGGCCAATGAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLIIPAP*EANESG
Trigger: TCCACTCTCATTGGCCTCCCAAGGTGCTGGGATTAT...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGCCACATTGCCCAAGTTaGTCTCAAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLPHCPS*SQTPEL
Trigger: GAGCTCAGGAGTTTGAGACCAACTTGGGCAATGTGG...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGCACTGCACTCCAACCTaGGCTACAAAGCGAAACTCT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLHCTPT*ATKRNS
Trigger: AGAGTTTCGCTTTGTAGCCCAGGTTGGAGTGCAGTG...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR TCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCGGATGGAGGCTGCAGTaGGCCGCGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFGWRLQ*AAIVPL
Trigger: CAGTGGCACGATCGCGGCTCACTGCAGCCTCCATCC...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGAATACAAAAATCAGCTaGGCCTGGTGTCACGTGCCT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLNTKIS*AWCHVP
Trigger: AGGCACGTGACACCAGGCCCAGCTGATTTTTGTATT...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCCTATTTTCACTTCTGTaGATCTTCAGTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATLFSLL*IFSNFR
Trigger: CCTGAAGTTACTGAAGATCCACAGAAGTGAAAATAG...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCAGCCTCCAGAGCAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFSLQSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTGCTCTGGAGGCT...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTCACACCACCATGCTTaGCTAATTTTTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATSHHHA*LIFVGF
Trigger: AAAACCTACAAAAATTAGCCAAGCATGGTGGTGTGA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCCTCCTGGGCTTGAGTaGTCCTCCTGCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFPPGLE*SSCLST
Trigger: GGTGCTGAGGCAGGAGGATCACTCAAGCCCAGGAGG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCCAGAGGATGGAGGCTaGAGTGAGCCGCGATCGTGC +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFPEDGG*SEPRSC
Trigger: GCACGATCGCGGCTCACTGCAGCCTCCATCCTCTGG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCCGGGAGGCGGAGCTTaGAGTGAGCCGAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFPGGGA*SEPRSH
Trigger: GTGAGATCTCGGCTCACTGCAAGCTCCGCCTCCCGG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGAGGCTCACACCACCATaGTTGGCTAATTTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLRLTPP*LANFCR
Trigger: CCTACAAAAATTAGCCAAGCATGGTGGTGTGAGCCT...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAGTCAGCAAAGGGTGGTaGATTATCATTAGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTVSKGW*IIISSY
Trigger: GTAAGAACTAATGATAATCCACCACCCTTTGCTGAC...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCCTAAAGGGTGATCAGTaGAAATTTTCTTCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATLKGDQ*KFSSVS
Trigger: ACTAACAGAAGAAAATTTCCACTGATCACCCTTTAG...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCTGATCTCTGCTCACTaGAAGCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFLISAH*KLRLPG
Trigger: ACCCGGGAGGCGGAGCTTGCAGTGAGCAGAGATCAG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCCGGGAGACAGAGGTTaGAGTGAGGCGAGATCGCGA +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFPGDRG*SEARSR
Trigger: TCGCGATCTCGCCTCACTGCAACCTCTGTCTCCCGG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGTTTGGGGATAGGTGGTaGAGTTTGGAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLFGDRW*SLEQCF
Trigger: AAAACATTGCTCCAAACTCCACCACCTATCCCCAAA...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCGCACCCCCAAGTAGCTaGGAGGACAGGTGCAAGCCA +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFAPPSS*EDRCKP
Trigger: TGGCTTGCACCTGTCCTCCCAGCTACTTGGGGGTGC...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGCAAACAGGCTTTGTATaGGCAACATGGCTGTTTATT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLQTGFV*ATWLFI
Trigger: AATAAACAGCCATGTTGCTCATACAAAGCCTGTTTG...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR TCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTGGAGTGCAGTGGCCTaGTCTCTGCTCACTGCAAGC +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFWSAVA*SLLTAS
Trigger: GCTTGCAGTGAGCAGAGATCAGGCCACTGCACTCCA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCAGACAGAGGTTGCAGTaGGGCGAGATCGCGACACTG +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFRQRLQ*GEIATL
Trigger: CAGTGTCGCGATCTCGCCTCACTGCAACCTCTGTCT...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTCGCCTAGGCTGGAGTaGAGTGGCCTGATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFSPRLE*SGLISA
Trigger: AGCAGAGATCAGGCCACTGCACTCCAGCCTAGGCGA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTTGCCCTTCCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFLPFLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGGAAGGGCAA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCGGAGGCCGAGGTGGGTaGATTATGCGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFGGRGG*IMRSGD
Trigger: ATCTCCTGACCGCATAATCCACCCACCTCGGCCTCC...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTTTGGGAGGCCGAGGTaGGTGGATTATGCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFFGRPR*VDYAVR
Trigger: CCTGACCGCATAATCCACCCACCTCGGCCTCCCAAA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGAATTTTTGTAGGTTTTaGAGAGACAGGCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLNFCRF*RDRLLP
Trigger: TGGCAAGAGCCTGTCTCTCCAAAACCTACAAAAATT...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR TCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCATGGTCTCGATCTCCTaGCCTTGTGATCCAACCGCC +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFMVSIS*PCDPTA
Trigger: GGCGGTTGGATCACAAGGTCAGGAGATCGAGACCAT...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTCATCTTCTGCCTCCTaGGCTCGAGAGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFSSSAS*AREILL
Trigger: CAGGAGGATCTCTCGAGCTCAGGAGGCAGAAGATGA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGTCACACCACCATGCTTaGCTAATTTTTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLSHHHA*LIFVGF
Trigger: AAAACCTACAAAAATTAGCCAAGCATGGTGGTGTGA...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTTCATGCAATTCTCCTaGCTCAGCCTCCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFFMQFS*LSLQSS
Trigger: GCTGCTCTGGAGGCTGAGGCAGGAGAATTGCATGAA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGCTAAAGGGTGATCAGTaGAAATTTTCTTCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLLKGDQ*KFSSVS
Trigger: ACTAACAGAAGAAAATTTCCACTGATCACCCTTTAG...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
3UTR CAA 72 bp GCAAAGGGTGGTGGATTATCATTAGTTCTTACAGGTTaGGGGATAGGTGGTGGAGTTTGGAGCAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: AKGGGLSLVLTG*GIGGGVWSNVL
Trigger: CAAAACATTGCTCCAAACTCCACCACCTATCCCCAAACCTGTAAGAACTAATGATAATCCACCACCCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTATGATGGCTTAGCTTaGGCTCAGAGGACGGACAGA +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFYDGLA*AQRTDR
Trigger: TCTGTCCGTCCTCTGAGCTCAAGCTAAGCCATCATA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCGGGATCTTGCTGTATTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFGILLY*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAATACAGCAAGATCCC...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCTCGAGAGATCCTCCTaGATGAGTCTTCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFLERSS*MSLPSS
Trigger: GCTACTTGGAAGACTCATGCAGGAGGATCTCTCGAG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCATAATCCCAGCACCTTaGGAGGCCAATGAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFIIPAP*EANESG
Trigger: TCCACTCTCATTGGCCTCCCAAGGTGCTGGGATTAT...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCAGTCTTCCAAGTAGCTaGGACTACAGGCTCACACCA +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFSLPSS*DYRLTP
Trigger: TGGTGTGAGCCTGTAGTCCCAGCTACTTGGAAGACT...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCCACATTGCCCAAGTTaGTCTCAAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFPHCPS*SQTPEL
Trigger: GAGCTCAGGAGTTTGAGACCAACTTGGGCAATGTGG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCACTGCACTCCAACCTaGGCTACAAAGCGAAACTCT +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFHCTPT*ATKRNS
Trigger: AGAGTTTCGCTTTGTAGCCCAGGTTGGAGTGCAGTG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR TCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTCCTGGCTAACACAGTaGAACCCCGACTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFSWLTQ*NPDSTK
Trigger: TTTAGTAGAGTCGGGGTTTCACTGTGTTAGCCAGGA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCAGGTTTGGGGATAGGTaGTGGAGTTTGGAGCAATGT +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFRFGDR*WSLEQC
Trigger: ACATTGCTCCAAACTCCACCACCTATCCCCAAACCT...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCCTTTCCTTGGAGAATaGTCATACCGACATAGAAGG +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFPFLGE*SYRHRR
Trigger: CCTTCTATGTCGGTATGAGCATTCTCCAAGGAAAGG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396385.4
CDS-3UTR TCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCAAACAGGCTTTGTATaGGCAACATGGCTGTTTATT +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFQTGFV*ATWLFI
Trigger: AATAAACAGCCATGTTGCTCATACAAAGCCTGTTTG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR GCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTATTTATTCATCTTCTaGCTCCTGAGCTCGAGAGAT +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFYLFIF*LLSSRD
Trigger: ATCTCTCGAGCTCAGGAGGCAGAAGATGAATAAATA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCGTCAGCAAAGGGTGGTaGATTATCATTAGTTCTTAC +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFVSKGW*IIISSY
Trigger: GTAAGAACTAATGATAATCCACCACCCTTTGCTGAC...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCAATTTTTGTAGGTTTTaGAGAGACAGGCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFNFCRF*RDRLLP
Trigger: TGGCAAGAGCCTGTCTCTCCAAAACCTACAAAAATT...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCTATTTTCACTTCTGTaGATCTTCAGTAACTTCAGG +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFLFSLL*IFSNFR
Trigger: CCTGAAGTTACTGAAGATCCACAGAAGTGAAAATAG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CCA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTCACACCACCATGCTTaGCTAATTTTTGTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFSHHHA*LIFVGF
Trigger: AAAACCTACAAAAATTAGCCAAGCATGGTGGTGTGA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CAA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCCGGGGTTTCACTGTGTaGGCCATGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATRGFTV*AMLVLN
Trigger: GTTCAAGACCAGCATGGCCAACACAGTGAAACCCCG...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CAA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCGGAACAAGGCTGAAGTaGGTCAGCTGTACAAAGGGC +
Preference number: 5 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATGTRLK*VSCTKG
Trigger: GCCCTTTGTACAGCTGACCAACTTCAGCCTTGTTCC...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CAA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACGGGGTTTCACTGTGTaGGCCATGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTRGFTV*AMLVLN
Trigger: GTTCAAGACCAGCATGGCCAACACAGTGAAACCCCG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CAA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACAGGAACAAGGCTGAAGTaGGTCAGCTGTACAAAGGGC +
Preference number: 5 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTGTRLK*VSCTKG
Trigger: GCCCTTTGTACAGCTGACCAACTTCAGCCTTGTTCC...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CAA 90 bp CAGGCTTTGTATGAGCAACATGGCTGTTTATTTCACCTGAGTGCAGGCGGGCTGCGGGGTTTCACTGTGTaGGCCATGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: QALYEQHGCLFHLSAGGLRGFTV*AMLVLN
Trigger: GTTCAAGACCAGCATGGCCAACACAGTGAAACCCCG...CAGCCCGCCTGCACTCAGGTGAAATAAACAGCCATGTTGCTCATACAAAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287594.7
ENST00000396385.4
CDS-3UTR CAA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCTGCCCGGCCTACGTTTaGATGTTAAAATGTATCTTC +
Preference number: 5 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATCPAYV*MLKCIF
Trigger: GAAGATACATTTTAACATCAAAACGTAGGCCGGGCA...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CAA 90 bp CAGTTGAGGCCAGGAGTTGGAGACTGTCTCACGTGTCCGTGTGAAGAGGCCACCCTCACACCACCATGCTaGGCTAATTTTTGTAGGTTT +
Preference number: 5 (lower is better)
Translates to: QLRPGVGDCLTCPCEEATLTPPC*ANFCRF
Trigger: AAACCTACAAAAATTAGCCAAGCATGGTGGTGTGAG...GGTGGCCTCTTCACACGGACACGTGAGACAGTCTCCAACTCCTGGCCTCAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CAA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACATGCCCGGCCTACGTTTaGATGTTAAAATGTATCTTC +
Preference number: 5 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTCPAYV*MLKCIF
Trigger: GAAGATACATTTTAACATCAAAACGTAGGCCGGGCA...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CAA 90 bp GGGATAGGTGGTGGAGTTTGGAGCAATGTTTTGCGGGCAGGGGTGGATCTCACACTCACACCACCATGCTaGGCTAATTTTTGTAGGTTT +
Preference number: 5 (lower is better)
Translates to: GIGGGVWSNVLRAGVDLTLTPPC*ANFCRF
Trigger: AAACCTACAAAAATTAGCCAAGCATGGTGGTGTGAG...TGTGAGATCCACCCCTGCCCGCAAAACATTGCTCCAAACTCCACCACCTATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CAA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCTGCCCGGCCTACGTTTaGATGTTAAAATGTATCTTC +
Preference number: 5 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFCPAYV*MLKCIF
Trigger: GAAGATACATTTTAACATCAAAACGTAGGCCGGGCA...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2
CDS-3UTR CAA 90 bp ATCACAATGGTGCAATGTCATCAGTTAAGGCTATTTTCACTTCTGTGGATCTTCCTCACACCACCATGCTaGGCTAATTTTTGTAGGTTT +
Preference number: 5 (lower is better)
Translates to: ITMVQCHQLRLFSLLWIFLTPPC*ANFCRF
Trigger: AAACCTACAAAAATTAGCCAAGCATGGTGGTGTGAG...GAAGATCCACAGAAGTGAAAATAGCCTTAACTGATGACATTGCACCATTGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287594.7
ENST00000396385.4
ENST00000612041.2