RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPV17 (Homo sapiens)

Ensembl gene IDs: ENSG00000115204

Ensembl transcript IDs: ENST00000233545.6, ENST00000357186.10, ENST00000380044.6, ENST00000399052.8, ENST00000402310.5, ENST00000402722.5, ENST00000403262.6, ENST00000405076.5, ENST00000405983.5, ENST00000415514.5, ENST00000426513.6, ENST00000428910.5, ENST00000430991.5, ENST00000475085.1, ENST00000486898.1, ENST00000494436.1, ENST00000616446.1, ENST00000616707.1, ENST00000617583.4, ENST00000621183.4, ENST00000621470.4, ENST00000622003.4

Found 513 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATaGGCTGAGATGGGCTCAGAGGTCAGTGGCACCAGGAGGCCCCTG +
Preference number: 1 (lower is better)
Translates to: GLLSRRTKEARVFLA*AEMGSEVSGTRRPL
Trigger: CAGGGGCCTCCTGGTGCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
3UTR TCA 90 bp GCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCA +
Preference number: 1 (lower is better)
Translates to: ALTGNPTPWKLVCPL*GGCLTVPGSSCITA
Trigger: TGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
3UTR TCA 90 bp CGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTAGGAGT +
Preference number: 1 (lower is better)
Translates to: RSRVKLHHCKVETME*GRLRADVPSRTGRS
Trigger: ACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR CCA 90 bp CTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTA +
Preference number: 1 (lower is better)
Translates to: LTVPGSSCITARWKR*SEAGLEPMCLPGQV
Trigger: TACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR CCA 90 bp GGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCA +
Preference number: 1 (lower is better)
Translates to: GGCLTVPGSSCITAR*KRWSEAGLEPMCLP
Trigger: TGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR TCA 90 bp ACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGAT +
Preference number: 1 (lower is better)
Translates to: TQPRGNWYAHFEEVV*PFQGQAASLQGGND
Trigger: ATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
3UTR GCA 90 bp ACTGCAAGGTGGAAACGATGGAGTGAGGCAGGCTTAGAGCCGATGTaGCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTG +
Preference number: 1 (lower is better)
Translates to: TARWKRWSEAGLEPM*LPGQVGVPDNSNTL
Trigger: CAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR CCA 90 bp GGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGAGTaGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAG +
Preference number: 1 (lower is better)
Translates to: GRVRVTNVSMKSGDE*HLLGYGCKVDKVMK
Trigger: CTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR GCA 90 bp GAACCCAGGCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGAGGCCCCTGTGGCTaGTCCCCTGCTGGGTGTTCC +
Preference number: 2 (lower is better)
Translates to: EPRPSLKEDQGGQGIPGMGGPCG*SPAGCS
Trigger: GGAACACCCAGCAGGGGAGCAGCCACAGGGGCCTCC...CATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGCCTGGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399052.8
3UTR-3UTR GCA 90 bp AAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGGTCAGTGGCCTGTGGCTGCTCCCCTaGTGGGTGTTCCTGCCCAAG +
Preference number: 2 (lower is better)
Translates to: KEARVFLAWAEMGSEVSGLWLLP*WVFLPK
Trigger: CTTGGGCAGGAACACCCAGCAGGGGAGCAGCCACAG...GCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
3UTR-3UTR GCA 90 bp GAACCCAGGCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGCCTGCTGGGTGTTCCTaGCCAAGTGAGGCCCCAAAG +
Preference number: 2 (lower is better)
Translates to: EPRPSLKEDQGGQGIPGMPAGCS*PSEAPK
Trigger: CTTTGGGGCCTCACTTGGGCAGGAACACCCAGCAGG...CATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGCCTGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
3UTR CAA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGC +
Preference number: 2 (lower is better)
Translates to: SSDRQPNPVETGMPT*RRLSDRSRVKLHHC
Trigger: GCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR TCA 90 bp GAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCCTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTT +
Preference number: 2 (lower is better)
Translates to: EGHCRVLVLLSSDRQPNPLVCPL*GGCLTV
Trigger: AACGGTCAGACAACCTCCTCAAAGTGGGCATACCAG...GGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR TCA 90 bp GTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTAGTCCTCTTAAGCTCTaGCCGGCAACCCAACCCCGT +
Preference number: 2 (lower is better)
Translates to: VLLSSDRQPNPVETGMPTSPLKL*PATQPR
Trigger: ACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACT...AGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR CAA 90 bp CGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAA +
Preference number: 2 (lower is better)
Translates to: RQPNPVETGMPTLRR*SDRSRVKLHHCKVE
Trigger: TTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
3UTR-3UTR CCA 90 bp CGATGGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTAGGAGTTCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: RWSEAGLEPMCLPGQVGVQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...AACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp CGGCCAACCTGTAATGAAGGGGGACCAGGTAGAAGTTGGCTAACTGCACAGCAGAATCCCGCTGTAGTTTaGCCCAGTTGTCCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: RPTCNEGGPGRSWLTAQQNPAVV*PSCPGL
Trigger: CAGCCCAGGACAACTGGGCCAAACTACAGCGGGATT...CTGCTGTGCAGTTAGCCAACTTCTACCTGGTCCCCCTTCATTACAGGTTGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415514.5
ENST00000426513.6
3UTR-3UTR TCA 90 bp CCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCTCCAGTTGTCCTGGGCTaGCAGTCCATTAAGTGCCCC +
Preference number: 2 (lower is better)
Translates to: PGQVGVPDNSNTLDNGQPPVVLG*QSIKCP
Trigger: GGGGCACTTAATGGACTGTCAGCCCAGGACAACTGG...AGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415514.5
3UTR-3UTR GCA 90 bp GACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGTTCCAGGGTCAAGCTaGATCACTGCAAGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: DRQPNPVETGMPTLRRLSVPGSS*ITARWK
Trigger: TTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAAC...AGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
3UTR-3UTR CCA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp GTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: VLLSSDRQPNPVETGMPTCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...AGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR GCA 90 bp GTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 2 (lower is better)
Translates to: VLVLLSSDRQPNPVETGMVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...CATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR GCA 90 bp GTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGGTTCCAGGGTCAAGCTaGATCACTGCAAGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: VLVLLSSDRQPNPVETGMVPGSS*ITARWK
Trigger: TTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAAC...CATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp TCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGCAGGCTTAGAGCCGATAACAGCAACACATTaGACAACGGCCAACCCGCTG +
Preference number: 2 (lower is better)
Translates to: SSCITARWKRWSEAGLEPITATH*TTANPL
Trigger: CAGCGGGTTGGCCGTTGTCCAATGTGTTGCTGTTAT...CGGCTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402722.5
3UTR-3UTR TCA 90 bp CCAGATAACAGCAACACATTGGACAACGGCCAACCTGTAATGAAGGGGGACCAGTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: PDNSNTLDNGQPVMKGDQFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...CTGGTCCCCCTTCATTACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426513.6
3UTR-3UTR CCA 90 bp ACTGAGGCACCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 2 (lower is better)
Translates to: TEAPYKGFRESLKSWSYKGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...CTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGGTGCCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
3UTR-3UTR CCA 90 bp AACACATTGGACAACGGCCAACCTGTAATGAAGGGGGACCAGGTAGAAGTTGGCGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAG +
Preference number: 2 (lower is better)
Translates to: NTLDNGQPVMKGDQVEVGARWKR*SEAGLE
Trigger: CTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGC...GCCAACTTCTACCTGGTCCCCCTTCATTACAGGTTGGCCGTTGTCCAATGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426513.6
3UTR-3UTR TCA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR TCA 90 bp GGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGAGTCCTCTTAAGCTCTaGCCGGCAACCCAACCCCGT +
Preference number: 2 (lower is better)
Translates to: GDEWHLLGYGCKVDKVMKSPLKL*PATQPR
Trigger: ACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACT...CTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR GCA 90 bp CTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAAGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 2 (lower is better)
Translates to: LPGQVGVPDNSNTLDNGQVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...TTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR GCA 90 bp GTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTCAGATATTTATGGAGTaGCTAGTATGTGGTGGGAAT +
Preference number: 2 (lower is better)
Translates to: VLLSSDRQPNPVETGMPTQIFME*LVCGGN
Trigger: ATTCCCACCACATACTAGGCACTCCATAAATATCTG...AGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp GGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 2 (lower is better)
Translates to: GDEWHLLGYGCKVDKVMKGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...CTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp CTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGAGTGGCATGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 2 (lower is better)
Translates to: LGRVRVTNVSMKSGDEWHGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...ATGCCACTCATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp TATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAAGCCTAGGCAGAAGAGTGGGGATGAGTaGCATTTGCTGGGATATGGG +
Preference number: 2 (lower is better)
Translates to: YKGFRESLKSWSYKKPRQKSGDE*HLLGYG
Trigger: CCCATATCCCAGCAAATGCCACTCATCCCCACTCTT...CTGCCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
3UTR-3UTR TCA 90 bp GGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: GDEWHLLGYGCKVDKVMKFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...CTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp ATGTGCCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: MCLPGQVGVPDNSNTLDNCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...GTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp ATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 2 (lower is better)
Translates to: IKGSKAVSVHFRVKRGIAGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...TGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR TCA 90 bp ATGAAGAGTGGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: MKSGDEWHLLGYGCKVDKFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...CTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCCACTCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp ACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 2 (lower is better)
Translates to: TRSLGRVRVTNVSMKSGDCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...ATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp ACTATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: TIIKGSKAVSVHFRVKRGQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...GCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR GCA 90 bp ACTATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 2 (lower is better)
Translates to: TIIKGSKAVSVHFRVKRGVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...GCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR CCA 90 bp ATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: IIKGSKAVSVHFRVKRGIQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...AATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR TCA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGAT +
Preference number: 2 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFVETME*GRLRAD
Trigger: ATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCAC...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR GCA 90 bp ATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 2 (lower is better)
Translates to: IIKGSKAVSVHFRVKRGIVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...AATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR GCA 90 bp ATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGTTCCAGGGTCAAGCTaGATCACTGCAAGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: IIKGSKAVSVHFRVKRGIVPGSS*ITARWK
Trigger: TTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAAC...AATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR GCA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 2 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000426513.6
3UTR CAA 90 bp GTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGAGTGGCATTaGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAA +
Preference number: 2 (lower is better)
Translates to: VRVTNVSMKSGDEWH*LGYGCKVDKVMKVQ
Trigger: TTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCCACTCTTCATAGACACATTTGTTACTCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
3UTR CCA 72 bp TCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATaGGCTGAGATGGGCTCAGAGGTCAGTGGCACCAGG +
Preference number: 3 (lower is better)
Translates to: SRRTKEARVFLA*AEMGSEVSGTR
Trigger: CCTGGTGCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
3UTR-3UTR CAA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 3 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR CAA 90 bp GTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 3 (lower is better)
Translates to: VLLSSDRQPNPVETGMPTPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...AGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR CAA 90 bp GAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 3 (lower is better)
Translates to: EGHCRVLVLLSSDRQPNPTGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...GGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR TCA 72 bp GGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGC +
Preference number: 3 (lower is better)
Translates to: GNPTPWKLVCPL*GGCLTVPGSSC
Trigger: GCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
3UTR TCA 72 bp AGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTaGCCGGCAACCCAACCCCGTGGAAACTGGTATGCC +
Preference number: 3 (lower is better)
Translates to: RGALQGASPLKL*PATQPRGNWYA
Trigger: GGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR CAA 90 bp GTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 3 (lower is better)
Translates to: VLVLLSSDRQPNPVETGMPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...CATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR CCA 72 bp CCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: PGSSCITARWKR*SEAGLEPMCLP
Trigger: TGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR CCA 72 bp CTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCAGGCTTAGAGCCGATG +
Preference number: 3 (lower is better)
Translates to: LTVPGSSCITAR*KRWSEAGLEPM
Trigger: CATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CAA 90 bp CGATGGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTAGGAGTTACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 3 (lower is better)
Translates to: RWSEAGLEPMCLPGQVGVTGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...AACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CAA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCGATAACAGCAACACATaGGACAACGGCCAACCCGCT +
Preference number: 3 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPDNSNT*DNGQPA
Trigger: AGCGGGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402722.5
3UTR TCA 72 bp GTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACA +
Preference number: 3 (lower is better)
Translates to: VKLHHCKVETME*GRLRADVPSRT
Trigger: TGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR TCA 72 bp CGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCTGCATCACTGCAAGGT +
Preference number: 3 (lower is better)
Translates to: RGNWYAHFEEVV*PFQGQAASLQG
Trigger: ACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
3UTR GCA 72 bp TGGAAACGATGGAGTGAGGCAGGCTTAGAGCCGATGTaGCTTCCAGGACAGGTAGGAGTTCCAGATAACAGC +
Preference number: 3 (lower is better)
Translates to: WKRWSEAGLEPM*LPGQVGVPDNS
Trigger: GCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CAA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 3 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR CAA 90 bp GCTACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 3 (lower is better)
Translates to: ATRSLGRVRVTNVSMKSGPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...CCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
3UTR-3UTR CAA 90 bp ACTGAGGCACCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 3 (lower is better)
Translates to: TEAPYKGFRESLKSWSYKTGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...CTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGGTGCCTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
3UTR-3UTR CAA 90 bp ACTATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 3 (lower is better)
Translates to: TIIKGSKAVSVHFRVKRGTGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...GCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
3UTR-3UTR CAA 90 bp GTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCTGTAATGAAGGATAACAGCAACACATaGGACAACGGCCAACCTGTA +
Preference number: 3 (lower is better)
Translates to: VGVPDNSNTLDNGQPVMKDNSNT*DNGQPV
Trigger: TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...CTTCATTACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415514.5
ENST00000426513.6
3UTR TCA 72 bp TCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTaGAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAG +
Preference number: 3 (lower is better)
Translates to: SRALKQSVYILE*RGALQGASPLK
Trigger: CTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGCGGCCAGGGCCCGCTaGTATGCCCGCCAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: EGHCRVLVLLSSDRQPNPAARAR*YARQSA
Trigger: GGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGC...GGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp AAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGGTCAGTGGCGCGGCCAGGGCCCGCTaGTATGCCCGCCAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: KEARVFLAWAEMGSEVSGAARAR*YARQSA
Trigger: GGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGC...GCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR TCA 90 bp AAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGGTCAGTGGCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KEARVFLAWAEMGSEVSGCTFHG*AARARW
Trigger: CCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACA...GCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR CCA 90 bp CCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCGCGGCCAGGGCCCGCTaGTATGCCCGCCAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: PNPVETGMPTLRRLSDRSAARAR*YARQSA
Trigger: GGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGC...GGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp GAACCCAGGCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGAGTGCCATGCTTCCTaGGCGCCGAGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: EPRPSLKEDQGGQGIPGMECHAS*APSLPP
Trigger: GGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTC...CATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGCCTGGGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR TCA 90 bp AAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGGTCAGTGGCACTCCTGACCCCAGGTaGTCCACCTGCCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: KEARVFLAWAEMGSEVSGTPDPR*STCLGR
Trigger: GCGGCCAAGGCAGGTGGATCACCTGGGGTCAGGAGT...GCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR GCA 90 bp AGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGCAGGGCCCGCTGGTATaGCCGCCAGAGTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: RRTKEARVFLAWAEMGSEQGPLV*PPECHA
Trigger: AGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTG...CTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR TCA 90 bp TGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CRVLVLLSSDRQPNPVETCTFHG*AARARW
Trigger: CCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACA...AGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGCAGGGCCCGCTGGTATaGCCGCCAGAGTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRQGPLV*PPECHA
Trigger: AGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTG...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCCCTCTCTGGTGTTCCTaGAGACCCCGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: EGHCRVLVLLSSDRQPNPPLWCS*RPRLST
Trigger: GGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGG...GGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GAACCCAGGCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGCCCGCCAGAGTGCCATaGTTCCTGAGCGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: EPRPSLKEDQGGQGIPGMPARVP*FLSAEP
Trigger: AGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGG...CATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGCCTGGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR GCA 90 bp TTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGGAGGCCCCTGTGGCTaGTCCCCTGCTGGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: FSQGGPRRPGYSWHGLRWGGPCG*SPAGCS
Trigger: GGAACACCCAGCAGGGGAGCAGCCACAGGGGCCTCC...CCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR CCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGGCGGCCAGGGCCCGCTaGTATGCCCGCCAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKAARAR*YARQSA
Trigger: GGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGC...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGAGTGCCATGCTTCCTaGGCGCCGAGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: NPVETGMPTLRRLSDRSRECHAS*APSLPP
Trigger: GGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTC...CCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000426513.6
CDS-3UTR TCA 90 bp GTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGGAGTGCCATGCTTCCTaGGCGCCGAGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VLVLLSSDRQPNPVETGMECHAS*APSLPP
Trigger: GGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTC...CATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TCTACCTCTCTGTCTAACCTAGGCTGCAGCACCCCAGCCACTGTCCCTCCAGATCCCGCCAGAGTGCCATaGTTCCTGAGCGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: STSLSNLGCSTPATVPPDPARVP*FLSAEP
Trigger: AGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGG...ATCTGGAGGGACAGTGGCTGGGGTGCTGCAGCCTAGGTTAGACAGAGAGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR GCA 90 bp CGATGGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTAGGAGTTCCCGCCAGAGTGCCATaGTTCCTGAGCGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: RWSEAGLEPMCLPGQVGVPARVP*FLSAEP
Trigger: AGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGG...AACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp AAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGGTCAGTGGCCCTGCTGGGTGTTCCTaGCCAAGTGAGGCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: KEARVFLAWAEMGSEVSGPAGCS*PSEAPK
Trigger: CTTTGGGGCCTCACTTGGGCAGGAACACCCAGCAGG...GCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR GCA 90 bp GAACCCAGGCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGCTGTGGCTGCTCCCCTaGTGGGTGTTCCTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: EPRPSLKEDQGGQGIPGMLWLLP*WVFLPK
Trigger: CTTGGGCAGGAACACCCAGCAGGGGAGCAGCCACAG...CATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGCCTGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR CCA 90 bp TGCCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCGCGGCCAGGGCCCGCTaGTATGCCCGCCAGAGTGCC +
Preference number: 4 (lower is better)
Translates to: CLPGQVGVPDNSNTLDNGAARAR*YARQSA
Trigger: GGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGC...GCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402722.5
ENST00000415514.5
ENST00000426513.6
CDS-3UTR TCA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CLTVPGSSCITARWKRWSCTFHG*AARARW
Trigger: CCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACA...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp AAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGGTCAGTGGCAGTGGCTTCTTGGAGTaGGGAGCAGGAAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: KEARVFLAWAEMGSEVSGSGFLE*GAGSVS
Trigger: GGACACGCTTCCTGCTCCTCACTCCAAGAAGCCACT...GCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR GCA 90 bp GACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTCCTCTCTGGTGTTCCTaGAGACCCCGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: DRQPNPVETGMPTLRRLSPLWCS*RPRLST
Trigger: GGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGG...AGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp TCTACCTCTCTGTCTAACCTAGGCTGCAGCACCCCAGCCACTGTCCCTCCAGATCCTCTCTGGTGTTCCTaGAGACCCCGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: STSLSNLGCSTPATVPPDPLWCS*RPRLST
Trigger: GGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGG...ATCTGGAGGGACAGTGGCTGGGGTGCTGCAGCCTAGGTTAGACAGAGAGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR GCA 90 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGCCCGCCAGAGTGCCATaGTTCCTGAGCGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: NPVETGMPTLRRLSDRSRPARVP*FLSAEP
Trigger: AGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGG...CCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGGCCAGCAGTGCTaGCTTCCTCCCCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: AFSQGGPRRPGYSWHGLRWGQQC*LPPQKS
Trigger: TGACTTCTGGGGAGGAAGGCAGCACTGCTGGCCCCA...TCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR CCA 90 bp ACCTCTCTGTCTAACCTAGGCTGCAGCACCCCAGCCACTGTCCCTCCAGATATGAGAGTCCGGCCTCTCTaGTGTTCCTGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: TSLSNLGCSTPATVPPDMRVRPL*CSCRPR
Trigger: GCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCT...CATATCTGGAGGGACAGTGGCTGGGGTGCTGCAGCCTAGGTTAGACAGAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR CCA 90 bp GACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTAGAGTCCGGCCTCTCTaGTGTTCCTGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: DRQPNPVETGMPTLRRLSRVRPL*CSCRPR
Trigger: GCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCT...AGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGAGCCCAGGGACACCATaGTCAGAGTCCGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRSPGTP*SESGLS
Trigger: AGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCT...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp AGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGTGGCATGGGCTGAGATaGGCTCAGAGGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: RRTKEARVFLAWAEMGSEWHGLR*AQRSVA
Trigger: TGCCACTGACCTCTGAGCCCATCTCAGCCCATGCCA...CTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR CCA 90 bp AGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGAGGCCAGGGTATTCCTaGCATGGGCTGAGATGGGCT +
Preference number: 4 (lower is better)
Translates to: RRTKEARVFLAWAEMGSERPGYS*HGLRWA
Trigger: AGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCT...CTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR TCA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGCCAGTTGTCCTGGGCTaGCAGTCCATTAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRPVVLG*QSIKCP
Trigger: GGGGCACTTAATGGACTGTCAGCCCAGGACAACTGG...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp GCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGACTGGTCTCAAACTCCTaGCCCCAGGTGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: AFSQGGPRRPGYSWHGLRLVSNS*PQVIHL
Trigger: CAGGTGGATCACCTGGGGTCAGGAGTTTGAGACCAG...TCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR GCA 90 bp GAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: EGHCRVLVLLSSDRQPNPRLSTS*CEIMSP
Trigger: GGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCG...GGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000405076.5
ENST00000405983.5
CDS-3UTR GCA 90 bp GTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCTCTCTGGTGTTCCTaGAGACCCCGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: VLVLLSSDRQPNPVETGMPLWCS*RPRLST
Trigger: GGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGG...CATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp ACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGCACCTCTCTGGTGTTCCTaGAGACCCCGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: TVPGSSCITARWKRWSEAPLWCS*RPRLST
Trigger: GGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGG...TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp GAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGGCTTAGAGCCGATGTaGCTTCCAGGACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: EGHCRVLVLLSSDRQPNPGLEPM*LPGQVG
Trigger: TCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCC...GGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp TGGAAACGATGGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTAAGAGTCCGGCCTCTCTaGTGTTCCTGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: WKRWSEAGLEPMCLPGQVRVRPL*CSCRPR
Trigger: GCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCT...TACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp CGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACAGCCCAGGGACACCATaGTCAGAGTCCGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RQPNPVETGMPTLRRLSDSPGTP*SESGLS
Trigger: AGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCT...GTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAGCCCAGGGACACCATaGTCAGAGTCCGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPSPGTP*SESGLS
Trigger: AGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCT...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: EGHCRVLVLLSSDRQPNPGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...GGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATCAGTCCAGGAGGCCTaGGTCGGCAGGTATAGCTAC +
Preference number: 4 (lower is better)
Translates to: AFSQGGPRRPGYSWHGLRSVQEA*VGRYSY
Trigger: GTAGCTATACCTGCCGACCCAGGCCTCCTGGACTGA...TCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR TCA 90 bp TATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAAGCCTAGGCAGTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: YKGFRESLKSWSYKKPRQCTFHG*AARARW
Trigger: CCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACA...CTGCCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
CDS-3UTR TCA 90 bp CCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCCTCCACCAGCTGCTGTaGGATAATGTCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PVETGMPTLRRLSDRSRVLHQLL*DNVTQA
Trigger: GGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAG...GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000405076.5
ENST00000405983.5
ENST00000430991.5
CDS-3UTR TCA 90 bp GTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTCTCCACCAGCTGCTGTaGGATAATGTCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VLLSSDRQPNPVETGMPTLHQLL*DNVTQA
Trigger: GGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAG...AGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000405076.5
ENST00000405983.5
CDS-3UTR TCA 90 bp TACTTGGCCTTCTGGTCTACCTCTCTGTCTAACCTAGGCTGCAGCACCCCAGCCCTCCACCAGCTGCTGTaGGATAATGTCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: YLAFWSTSLSNLGCSTPALHQLL*DNVTQA
Trigger: GGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAG...GGCTGGGGTGCTGCAGCCTAGGTTAGACAGAGAGGTAGACCAGAAGGCCAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR TCA 90 bp CCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCCTCCACCAGCTGCTGTaGGATAATGTCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PNPVETGMPTLRRLSDRSLHQLL*DNVTQA
Trigger: GGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAG...GGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000405076.5
ENST00000405983.5
ENST00000430991.5
CDS-3UTR TCA 90 bp CGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCCAGTTGTCCTGGGCTaGCAGTCCATTAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RQPNPVETGMPTLRRLSDPVVLG*QSIKCP
Trigger: GGGGCACTTAATGGACTGTCAGCCCAGGACAACTGG...GTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp GACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTCCAGTTGTCCTGGGCTaGCAGTCCATTAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: DRQPNPVETGMPTLRRLSPVVLG*QSIKCP
Trigger: GGGGCACTTAATGGACTGTCAGCCCAGGACAACTGG...AGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp ACCTCTCTGTCTAACCTAGGCTGCAGCACCCCAGCCACTGTCCCTCCAGATATGCCAGTTGTCCTGGGCTaGCAGTCCATTAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: TSLSNLGCSTPATVPPDMPVVLG*QSIKCP
Trigger: GGGGCACTTAATGGACTGTCAGCCCAGGACAACTGG...CATATCTGGAGGGACAGTGGCTGGGGTGCTGCAGCCTAGGTTAGACAGAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR TCA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGAT +
Preference number: 4 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRVETME*GRLRAD
Trigger: ATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCAC...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp GACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTAGTCCTCTTAAGCTCTaGCCGGCAACCCAACCCCGT +
Preference number: 4 (lower is better)
Translates to: DRQPNPVETGMPTLRRLSSPLKL*PATQPR
Trigger: ACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACT...AGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp TGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTAGTCCTCTTAAGCTCTaGCCGGCAACCCAACCCCGT +
Preference number: 4 (lower is better)
Translates to: CRVLVLLSSDRQPNPVETSPLKL*PATQPR
Trigger: ACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACT...AGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp TTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGATTCCTGGCATGGGCTaGGATGGGCTCAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: FSQGGPRRPGYSWHGLRWIPGMG*DGLRGQ
Trigger: CTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAAT...CCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR GCA 90 bp TCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGCCCGCCAGAGTGCCATaGTTCCTGTCAAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SDRQPNPVETGMPTLRRLPARVP*FLSSQE
Trigger: CTCTTGGCTTGACAGGAAGCATGGCACTCTGGCGGG...CAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000233545.6
CDS-3UTR GCA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTCCTCTCTGGTGTTCCTaGAGACCCCGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: CLTVPGSSCITARWKRWSPLWCS*RPRLST
Trigger: GGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGG...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGGGCTTAGAGCCGATGTaGCTTCCAGGACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRGLEPM*LPGQVG
Trigger: TCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCC...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TGCCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCCCGCCAGAGTGCCATaGTTCCTGAGCGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: CLPGQVGVPDNSNTLDNGPARVP*FLSAEP
Trigger: AGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGG...GCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTAGAGTCCGGCCTCTCTaGTGTTCCTGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: CLTVPGSSCITARWKRWSRVRPL*CSCRPR
Trigger: GCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCT...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATAGAGTCCGGCCTCTCTaGTGTTCCTGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHRVRPL*CSCRPR
Trigger: GCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCT...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp GAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGAGAGTCCGGCCTCTCTaGTGTTCCTGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: ETGMPTLRRLSDRSRVKLRVRPL*CSCRPR
Trigger: GCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCT...CAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp CTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGAGCCCAGGGACACCATaGTCAGAGTCCGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LTVPGSSCITARWKRWSESPGTP*SESGLS
Trigger: AGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCT...CTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp TTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGGCAGGTATAGCTACTaGCATGGGGCCAGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: FSQGGPRRPGYSWHGLRWGRYSY*HGASSA
Trigger: AGCACTGCTGGCCCCATGCCAGTAGCTATACCTGCC...CCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR CCA 90 bp GCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGAAGGGTATTCCTGGCATaGGCTGAGATGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AFSQGGPRRPGYSWHGLRRVFLA*AEMGSE
Trigger: CTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCT...TCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
3UTR CAA 72 bp CGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RQPNPVETGMPT*RRLSDRSRVKL
Trigger: CAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRWWCQG*TDPKPC
Trigger: ACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCA...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp CGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGAT +
Preference number: 4 (lower is better)
Translates to: RQPNPVETGMPTLRRLSDVETME*GRLRAD
Trigger: ATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCAC...GTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGAT +
Preference number: 4 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPVETME*GRLRAD
Trigger: ATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCAC...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp CCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGAT +
Preference number: 4 (lower is better)
Translates to: PNPVETGMPTLRRLSDRSVETME*GRLRAD
Trigger: ATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCAC...GGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp ACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGCAAGTCCTCTTAAGCTCTaGCCGGCAACCCAACCCCGT +
Preference number: 4 (lower is better)
Translates to: TVPGSSCITARWKRWSEASPLKL*PATQPR
Trigger: ACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACT...TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp CAGTTGTCCTGGGCTGACAGTCCATTAAGTGCCCCTACCAGTGGGAGAAAGCAGAGTGGCTTCTTGGAGTaGGGAGCAGGAAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: QLSWADSPLSAPTSGRKQSGFLE*GAGSVS
Trigger: GGACACGCTTCCTGCTCCTCACTCCAAGAAGCCACT...CTGCTTTCTCCCACTGGTAGGGGCACTTAATGGACTGTCAGCCCAGGACAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415514.5
CDS-3UTR GCA 90 bp CCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAAGCCTAGGCAGGGCCCGCTGGTATaGCCGCCAGAGTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: PYKGFRESLKSWSYKKPRQGPLV*PPECHA
Trigger: AGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTG...CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
CDS-3UTR GCA 90 bp CCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: PVETGMPTLRRLSDRSRVRLSTS*CEIMSP
Trigger: GGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCG...GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000405076.5
ENST00000405983.5
ENST00000430991.5
CDS-3UTR GCA 90 bp GTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTGGCTTAGAGCCGATGTaGCTTCCAGGACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: VLLSSDRQPNPVETGMPTGLEPM*LPGQVG
Trigger: TCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCC...AGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGGCTTAGAGCCGATGTaGCTTCCAGGACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: DRQPNPVETGMPTLRRLSGLEPM*LPGQVG
Trigger: TCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCC...AGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp CCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGCAGGGCTTAGAGCCGATGTaGCTTCCAGGACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: PFQGQAASLQGGNDGVRQGLEPM*LPGQVG
Trigger: TCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCC...CTGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp GGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 4 (lower is better)
Translates to: GHCRVLVLLSSDRQPNPVVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...CACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGTTCCAGGGTCAAGCTaGATCACTGCAAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GHCRVLVLLSSDRQPNPVVPGSS*ITARWK
Trigger: TTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAAC...CACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGAGTGAAGAGGGGCATTaGAGGGTGCTAGTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: GHCRVLVLLSSDRQPNPVSEEGH*RVLVLL
Trigger: TAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT...CACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCGCCTCTCCACCAGCTaGAGCTGTCAGGACCTGTAC +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKRLSTS*SCQDLY
Trigger: GTACAGGTCCTGACAGCTGCAGCTGGTGGAGAGGCG...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAATCCCGCTGTAGTTTaGCCCAGTTGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPNPAVV*PSCPGL
Trigger: CAGCCCAGGACAACTGGGCCAAACTACAGCGGGATT...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp CGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACAATCCCGCTGTAGTTTaGCCCAGTTGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RQPNPVETGMPTLRRLSDNPAVV*PSCPGL
Trigger: CAGCCCAGGACAACTGGGCCAAACTACAGCGGGATT...GTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp ACCTCTCTGTCTAACCTAGGCTGCAGCACCCCAGCCACTGTCCCTCCAGATATGAATCCCGCTGTAGTTTaGCCCAGTTGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TSLSNLGCSTPATVPPDMNPAVV*PSCPGL
Trigger: CAGCCCAGGACAACTGGGCCAAACTACAGCGGGATT...CATATCTGGAGGGACAGTGGCTGGGGTGCTGCAGCCTAGGTTAGACAGAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR CCA 90 bp TGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTTGTCAGGACATCTCCTaGGATGGGCAGCTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: CRVLVLLSSDRQPNPVETCQDIS*DGQLSG
Trigger: TCCTGACAGCTGCCCATCCCAGGAGATGTCCTGACA...AGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405983.5
CDS-3UTR TCA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCTCCACCAGCTGCTGTaGGATAATGTCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHLHQLL*DNVTQA
Trigger: GGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAG...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000405076.5
ENST00000405983.5
ENST00000430991.5
CDS-3UTR TCA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTCTCCACCAGCTGCTGTaGGATAATGTCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CLTVPGSSCITARWKRWSLHQLL*DNVTQA
Trigger: GGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAG...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000405076.5
ENST00000405983.5
ENST00000430991.5
CDS-3UTR TCA 90 bp TCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: SDRQPNPVETGMPTLRRLWWCQG*TDPKPC
Trigger: ACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCA...CAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp CCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: PVETGMPTLRRLSDRSRVWWCQG*TDPKPC
Trigger: ACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCA...GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCCAGTTGTCCTGGGCTaGCAGTCCATTAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHPVVLG*QSIKCP
Trigger: GGGGCACTTAATGGACTGTCAGCCCAGGACAACTGG...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp CTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGAT +
Preference number: 4 (lower is better)
Translates to: LTVPGSSCITARWKRWSEVETME*GRLRAD
Trigger: ATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCAC...CTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp GACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: DRQPNPVETGMPTLRRLSFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...AGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp GTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: VLLSSDRQPNPVETGMPTFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...AGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCCTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTT +
Preference number: 4 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPLVCPL*GGCLTV
Trigger: AACGGTCAGACAACCTCCTCAAAGTGGGCATACCAG...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp TGGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTAGGAGTTCCACTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTT +
Preference number: 4 (lower is better)
Translates to: WSEAGLEPMCLPGQVGVPLVCPL*GGCLTV
Trigger: AACGGTCAGACAACCTCCTCAAAGTGGGCATACCAG...TGGAACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp CCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCCTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTT +
Preference number: 4 (lower is better)
Translates to: PVETGMPTLRRLSDRSRVLVCPL*GGCLTV
Trigger: AACGGTCAGACAACCTCCTCAAAGTGGGCATACCAG...GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTAGTCCTCTTAAGCTCTaGCCGGCAACCCAACCCCGT +
Preference number: 4 (lower is better)
Translates to: CLTVPGSSCITARWKRWSSPLKL*PATQPR
Trigger: ACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACT...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp AGTGGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGGAGTGCCATGCTTCCTaGGCGCCGAGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SGDEWHLLGYGCKVDKVMECHAS*APSLPP
Trigger: GGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTC...CATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380044.6
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp TTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGAGTGCAGTTGGAACTaGACCCAGGCCTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: FSQGGPRRPGYSWHGLRWECSWN*TQAFSQ
Trigger: TTGAGAGAAGGCCTGGGTTCAGTTCCAACTGCACTC...CCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR GCA 90 bp GTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: VLVLLSSDRQPNPVETGMRLSTS*CEIMSP
Trigger: GGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCG...CATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000405076.5
ENST00000405983.5
CDS-3UTR GCA 90 bp CTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCTCTCTGGTGTTCCTaGAGACCCCGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LPGQVGVPDNSNTLDNGQPLWCS*RPRLST
Trigger: GGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGG...TTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGAGGCCCCAAAGGGCCTaGATATCAAAGGACATTCCC +
Preference number: 4 (lower is better)
Translates to: FSQGGPRRPGYSWHGLRWRPQRA*ISKDIP
Trigger: GGGAATGTCCTTTGATATGCAGGCCCTTTGGGGCCT...CCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR GCA 90 bp CGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCCATCAGGGACCCTATaGAGGGTACACAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: RQPNPVETGMPTLRRLSDPSGTL*RVHRCC
Trigger: ACAACACCTGTGTACCCTGCATAGGGTCCCTGATGG...GTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405983.5
CDS-3UTR CCA 90 bp CCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: PVETGMPTLRRLSDRSRVARWKR*SEAGLE
Trigger: CTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGC...GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: NPVETGMPTLRRLSDRSRGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...CCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp TGGAAACGATGGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTAGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: WKRWSEAGLEPMCLPGQVGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...TACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp TTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGCTCCTTGTCACCTCGTaGGGATGGCAGACAGCAATA +
Preference number: 4 (lower is better)
Translates to: FSQGGPRRPGYSWHGLRWLLVTS*GWQTAI
Trigger: TATTGCTGTCTGCCATCCCCACGAGGTGACAAGGAG...CCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR CCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCAACCCGCTGTAGTTTaGCCCAGTTGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKQPAVV*PSCPGL
Trigger: CAGCCCAGGACAACTGGGCCAAACTACAGCGGGTTG...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402722.5
CDS-3UTR CCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGGGACATCTCCTGGGATaGGCAGCTGTCAGGACCTGT +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKGHLLG*AAVRTC
Trigger: ACAGGTCCTGACAGCTGCCCATCCCAGGAGATGTCC...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405983.5
3UTR CAA 72 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGC +
Preference number: 4 (lower is better)
Translates to: NPVETGMPTLRR*SDRSRVKLHHC
Trigger: GCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp CAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: QPNPVETGMPTLRRLSDRWWCQG*TDPKPC
Trigger: ACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCA...ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp GTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: VLVLLSSDRQPNPVETGMWWCQG*TDPKPC
Trigger: ACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCA...CATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: NPVETGMPTLRRLSDRSRWWCQG*TDPKPC
Trigger: ACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCA...CCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp ACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGCACTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTT +
Preference number: 4 (lower is better)
Translates to: TVPGSSCITARWKRWSEALVCPL*GGCLTV
Trigger: AACGGTCAGACAACCTCCTCAAAGTGGGCATACCAG...TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp GAAGGGGGACCAGGTAGAAGTTGGCTAACTGCACAGCAGGCCATAGATAGTAGTAGTCCTCTTAAGCTCTaGCCGGCAACCCAACCCCGT +
Preference number: 4 (lower is better)
Translates to: EGGPGRSWLTAQQAIDSSSPLKL*PATQPR
Trigger: ACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACT...ACTACTATCTATGGCCTGCTGTGCAGTTAGCCAACTTCTACCTGGTCCCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426513.6
CDS-3UTR TCA 90 bp ATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGAGTGCCATGCTTCCTaGGCGCCGAGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: IKGSKAVSVHFRVKRGIAECHAS*APSLPP
Trigger: GGGAGGGAGGCTCGGCGCTCAGGAAGCATGGCACTC...TGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000426513.6
CDS-3UTR TCA 90 bp AAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGGTCAGTGGCTTCTTTTGTGGCTTTTaGGTTTCATGCGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KEARVFLAWAEMGSEVSGFFCGF*VSCAEG
Trigger: GCCTTCTGCGCATGAAACTCAAAAGCCACAAAAGAA...GCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR GCA 90 bp GAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: ETGMPTLRRLSDRSRVKLRLSTS*CEIMSP
Trigger: GGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCG...CAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000405076.5
ENST00000405983.5
ENST00000430991.5
CDS-3UTR GCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKRLSTS*CEIMSP
Trigger: GGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCG...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000405076.5
ENST00000405983.5
ENST00000430991.5
CDS-3UTR GCA 90 bp CATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 4 (lower is better)
Translates to: HCRVLVLLSSDRQPNPVEVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...TTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 4 (lower is better)
Translates to: DRQPNPVETGMPTLRRLSVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...AGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp CCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCGTTCCAGGGTCAAGCTaGATCACTGCAAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PNPVETGMPTLRRLSDRSVPGSS*ITARWK
Trigger: TTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAAC...GGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGGGGATGAGTGGCATTTaGTGGGATATGGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRGMSGI*WDMGVK
Trigger: CTTTACACCCATATCCCAGCAAATGCCACTCATCCC...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp AGTGGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGCCCGCCAGAGTGCCATaGTTCCTGAGCGCCGAGCCT +
Preference number: 4 (lower is better)
Translates to: SGDEWHLLGYGCKVDKVMPARVP*FLSAEP
Trigger: AGGCTCGGCGCTCAGGAAGCATGGCACTCTGGCGGG...CATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380044.6
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCTGTATGGGGCCAGCAGTGCTaGCTTCCTCCCCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GQVGVPDNSNTLDNGQPVWGQQC*LPPQKS
Trigger: TGACTTCTGGGGAGGAAGGCAGCACTGCTGGCCCCA...TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415514.5
CDS-3UTR CCA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCAGCCCAGGGACACCATaGTCAGAGTCCGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCSPGTP*SESGLS
Trigger: AGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCT...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp CCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAAGCCTAGGAGCCCAGGGACACCATaGTCAGAGTCCGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PYKGFRESLKSWSYKKPRSPGTP*SESGLS
Trigger: AGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCT...CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
CDS-3UTR CCA 90 bp CTTTATTGTGAGTGTCTGACCAGGCTCCTACTTGGCCTTCTGGTCTACCTCTCTAGCCCAGGGACACCATaGTCAGAGTCCGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LYCECLTRLLLGLLVYLSSPGTP*SESGLS
Trigger: AGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCT...AGAGAGGTAGACCAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR CCA 90 bp CCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGCAGTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: PFQGQAASLQGGNDGVRQCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...CTGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp TCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SDRQPNPVETGMPTLRRLCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...CAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NPVETGMPTLRRLSDRSRQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...CCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp CAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: QPNPVETGMPTLRRLSDRQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp CTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LTVPGSSCITARWKRWSEQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...CTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp AGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: RLSDRSRVKLHHCKVETMGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...CATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp GAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: ETGMPTLRRLSDRSRVKLGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...CAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAAGAGTGGGGATGAGTaGCATTTGCTGGGATATGGG +
Preference number: 4 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPKSGDE*HLLGYG
Trigger: CCCATATCCCAGCAAATGCCACTCATCCCCACTCTT...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp TCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGAAGAGTGGGGATGAGTaGCATTTGCTGGGATATGGG +
Preference number: 4 (lower is better)
Translates to: SDRQPNPVETGMPTLRRLKSGDE*HLLGYG
Trigger: CCCATATCCCAGCAAATGCCACTCATCCCCACTCTT...CAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCATGGATAGTATGAAGTaGGTATATTGGGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EGHCRVLVLLSSDRQPNPMDSMK*VYWEGG
Trigger: CCCTCCCTCCCAATATACCCACTTCATACTATCCAT...GGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CCA 90 bp GAACCCAGGCCTTCTCTCAAGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGTCACCTCGTGGGGATaGCAGACAGCAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: EPRPSLKEDQGGQGIPGMVTSWG*QTAIFF
Trigger: AAAGAATATTGCTGTCTGCCATCCCCACGAGGTGAC...CATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCTTGAGAGAAGGCCTGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
3UTR CAA 72 bp CCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATaGGACAACGGCCAACCCGCTGTAGTTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PGQVGVPDNSNT*DNGQPAVVWPS
Trigger: ACTGGGCCAAACTACAGCGGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402722.5
CDS-3UTR TCA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCCCAGTTGTCCTGGGCTaGCAGTCCATTAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCPVVLG*QSIKCP
Trigger: GGGGCACTTAATGGACTGTCAGCCCAGGACAACTGG...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp CTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCAGTTGTCCTGGGCTaGCAGTCCATTAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LPGQVGVPDNSNTLDNGQPVVLG*QSIKCP
Trigger: GGGGCACTTAATGGACTGTCAGCCCAGGACAACTGG...TTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402722.5
ENST00000415514.5
ENST00000426513.6
CDS-3UTR TCA 90 bp GAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: ETGMPTLRRLSDRSRVKLFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...CAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp AGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: RLSDRSRVKLHHCKVETMFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...CATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTT +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKLVCPL*GGCLTV
Trigger: AACGGTCAGACAACCTCCTCAAAGTGGGCATACCAG...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR TCA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCAGTCCTCTTAAGCTCTaGCCGGCAACCCAACCCCGT +
Preference number: 4 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCSPLKL*PATQPR
Trigger: ACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACT...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCTATGAAGAGTGGGGATaGGTGGCATTTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPYEEWG*VAFAGI
Trigger: TATCCCAGCAAATGCCACTCATCCCCACTCTTCATA...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp CGATGGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTAGGAGTTTATGAAGAGTGGGGATaGGTGGCATTTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: RWSEAGLEPMCLPGQVGVYEEWG*VAFAGI
Trigger: TATCCCAGCAAATGCCACTCATCCCCACTCTTCATA...AACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp ACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGCATTGGCTTCTTTGCACTaGCATGGGTTGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: TVPGSSCITARWKRWSEALASLH*HGLWSL
Trigger: CAGAGACCACAACCCATGTCAGTGCAAAGAAGCCAA...TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR TCA 90 bp AGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGTGGGAAGCTCTTTGGTaGAGGTGGAATTTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RLSDRSRVKLHHCKVETMWEALW*RWNLSR
Trigger: CCGGCTCAAATTCCACCTTCACCAAAGAGCTTCCCA...CATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR GCA 90 bp CTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGAGTGGCATCCTCTCTGGTGTTCCTaGAGACCCCGCCTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGRVRVTNVSMKSGDEWHPLWCS*RPRLST
Trigger: GGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGG...ATGCCACTCATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTCAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: CRVLVLLSSDRQPNPVETQHLLQ*IHFGGA
Trigger: GGCACCACCAAAGTGGATGCACTGAAGAAGATGTTG...AGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp CATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAACAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: HCRVLVLLSSDRQPNPVEQHLLQ*IHFGGA
Trigger: GGCACCACCAAAGTGGATGCACTGAAGAAGATGTTG...TTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp CCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCTGGCTTAGAGCCGATGTaGCTTCCAGGACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: PGQVGVPDNSNTLDNGQPGLEPM*LPGQVG
Trigger: TCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCC...AGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415514.5
ENST00000426513.6
CDS-3UTR GCA 90 bp CAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTAGTGAAGAGGGGCATTaGAGGGTGCTAGTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: QPNPVETGMPTLRRLSDRSEEGH*RVLVLL
Trigger: TAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT...ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp CCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGCAGGGGATGAGTGGCATTTaGTGGGATATGGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: PFQGQAASLQGGNDGVRQGMSGI*WDMGVK
Trigger: CTTTACACCCATATCCCAGCAAATGCCACTCATCCC...CTGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp AGTGAAGAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCACTGGGGTGTGTCCTTaGTTAGGAGGCAGTATCATA +
Preference number: 4 (lower is better)
Translates to: SEEGHCRVLVLLSSDRQPTGVCP*LGGSII
Trigger: TATGATACTGCCTCCTAAGCAAGGACACACCCCAGT...GGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR GCA 90 bp TGTCTTTATTGTGAGTGTCTGACCAGGCTCCTACTTGGCCTTCTGGTCTACCTCCTGTCTAACCTAGGCTaGAGCACCCCAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: CLYCECLTRLLLGLLVYLLSNLG*STPATV
Trigger: GACAGTGGCTGGGGTGCTGCAGCCTAGGTTAGACAG...GAGGTAGACCAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR CCA 90 bp CCAGATAACAGCAACACATTGGACAACGGCCAACCTGTAATGAAGGGGGACCAGAATCCCGCTGTAGTTTaGCCCAGTTGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PDNSNTLDNGQPVMKGDQNPAVV*PSCPGL
Trigger: CAGCCCAGGACAACTGGGCCAAACTACAGCGGGATT...CTGGTCCCCCTTCATTACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415514.5
ENST00000426513.6
CDS-3UTR CCA 90 bp AGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: RLSDRSRVKLHHCKVETMARWKR*SEAGLE
Trigger: CTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGC...CATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKARWKR*SEAGLE
Trigger: CTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGC...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: CLTVPGSSCITARWKRWSARWKR*SEAGLE
Trigger: CTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGC...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp GTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTGAGTCTCTAAAGAGCTaGAGCTACAAGAAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: VLLSSDRQPNPVETGMPTESLKS*SYKKPR
Trigger: CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTC...AGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp TGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTCCTATTTCTCATCACTaGGGTGTGTCCTTGCTTAGG +
Preference number: 4 (lower is better)
Translates to: CRVLVLLSSDRQPNPVETPISHH*GVSLLR
Trigger: CCTAAGCAAGGACACACCCCAGTGATGAGAAATAGG...AGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CCA 90 bp CAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTCTACAGCCTCAAGTGTaGATCCCCAGGTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: QPNPVETGMPTLRRLSDRLQPQV*IPRSHL
Trigger: AAGATGAGACCTGGGGATCCACACTTGAGGCTGTAG...ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CCA 90 bp CTTCAGTGCATCCACTTTGGTGGTGCCAGGGATGAACCGATCCAAAACCTTGTAGGCAGGTATAGCTACTaGCATGGGGCCAGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LQCIHFGGARDEPIQNLVGRYSY*HGASSA
Trigger: AGCACTGCTGGCCCCATGCCAGTAGCTATACCTGCC...TACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415514.5
CDS-3UTR CCA 90 bp TGTAATGAAGGGGGACCAGGTAGAAGTTGGCTAACTGCACAGCAGGCCATAGATTCAGTCCAGGAGGCCTaGGTCGGCAGGTATAGCTAC +
Preference number: 4 (lower is better)
Translates to: CNEGGPGRSWLTAQQAIDSVQEA*VGRYSY
Trigger: GTAGCTATACCTGCCGACCCAGGCCTCCTGGACTGA...ATCTATGGCCTGCTGTGCAGTTAGCCAACTTCTACCTGGTCCCCCTTCATTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415514.5
3UTR CAA 72 bp CCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATaGGACAACGGCCAACCTGTAATGAAGGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: PGQVGVPDNSNT*DNGQPVMKGDQ
Trigger: CTGGTCCCCCTTCATTACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415514.5
ENST00000426513.6
CDS-3UTR TCA 90 bp GAGCCGATGTGCCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: EPMCLPGQVGVPDNSNTLWWCQG*TDPKPC
Trigger: ACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCA...CAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCACATCGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402722.5
ENST00000415514.5
ENST00000426513.6
CDS-3UTR TCA 90 bp GAAGGGGGACCAGGTAGAAGTTGGCTAACTGCACAGCAGGCCATAGATAGTAGTTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: EGGPGRSWLTAQQAIDSSWWCQG*TDPKPC
Trigger: ACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCA...ACTACTATCTATGGCCTGCTGTGCAGTTAGCCAACTTCTACCTGGTCCCCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415514.5
ENST00000426513.6
CDS-3UTR TCA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGAT +
Preference number: 4 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCVETME*GRLRAD
Trigger: ATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCAC...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp AGCAACTGTCTTTATTGTGAGTGTCTGACCAGGCTCCTACTTGGCCTTCTGGTCCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCC +
Preference number: 4 (lower is better)
Translates to: SNCLYCECLTRLLLGLLVRLSTS*CEIMSP
Trigger: GGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCG...GACCAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAGACAGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR GCA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 4 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 4 (lower is better)
Translates to: CLTVPGSSCITARWKRWSVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp AGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGTTCCAGGGTCAAGCTaGATCACTGCAAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: RLSDRSRVKLHHCKVETMVPGSS*ITARWK
Trigger: TTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAAC...CATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGTTCCAGGGTCAAGCTaGATCACTGCAAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: CLTVPGSSCITARWKRWSVPGSS*ITARWK
Trigger: TTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAAC...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGGTTCCAGGGTCAAGCTaGATCACTGCAAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKVPGSS*ITARWK
Trigger: TTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAAC...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTAGTGAAGAGGGGCATTaGAGGGTGCTAGTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: CLTVPGSSCITARWKRWSSEEGH*RVLVLL
Trigger: TAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATAGTGAAGAGGGGCATTaGAGGGTGCTAGTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHSEEGH*RVLVLL
Trigger: TAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GGGGGACCAGGTAGAAGTTGGCTAACTGCACAGCAGGCCATAGATAGTAGTTGGAGTGAAGAGGGGCATTaGAGGGTGCTAGTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: GGPGRSWLTAQQAIDSSWSEEGH*RVLVLL
Trigger: TAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT...CCAACTACTATCTATGGCCTGCTGTGCAGTTAGCCAACTTCTACCTGGTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426513.6
CDS-3UTR GCA 90 bp GAGGGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCCAGATATTTATGGAGTaGCTAGTATGTGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: EGHCRVLVLLSSDRQPNPQIFME*LVCGGN
Trigger: ATTCCCACCACATACTAGGCACTCCATAAATATCTG...GGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGGGGATGAGTGGCATTTaGTGGGATATGGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: VLVLLSSDRQPNPVETGMGMSGI*WDMGVK
Trigger: CTTTACACCCATATCCCAGCAAATGCCACTCATCCC...CATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TGGAAACGATGGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTAGGGATGAGTGGCATTTaGTGGGATATGGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: WKRWSEAGLEPMCLPGQVGMSGI*WDMGVK
Trigger: CTTTACACCCATATCCCAGCAAATGCCACTCATCCC...TACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp ACTGAGGCACCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAGGATCTCGGCTCACTaGAACCTCTGCATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TEAPYKGFRESLKSWSYKRISAH*NLCIPG
Trigger: ACCTGGGATGCAGAGGTTGCAGTGAGCCGAGATCCT...CTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGGTGCCTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR GCA 90 bp ATATTTACTGAGGCACCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTCACCCAGGCTGGAGTaGAGTGGCAGGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: IFTEAPYKGFRESLKSWSSPRLE*SGRISA
Trigger: AGCCGAGATCCTGCCACTGCACTCCAGCCTGGGTGA...GCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGGTGCCTCAGTAAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CCA 90 bp GGAGCTACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTAGAGTCCGGCCTCTCTaGTGTTCCTGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: GATRSLGRVRVTNVSMKSRVRPL*CSCRPR
Trigger: GCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCT...ACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGTAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCTGTAATGAAGAGCCCAGGGACACCATaGTCAGAGTCCGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: VGVPDNSNTLDNGQPVMKSPGTP*SESGLS
Trigger: AGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCT...CTTCATTACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426513.6
CDS-3UTR CCA 90 bp CCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAAGCCTAGGAATCCCGCTGTAGTTTaGCCCAGTTGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PYKGFRESLKSWSYKKPRNPAVV*PSCPGL
Trigger: CAGCCCAGGACAACTGGGCCAAACTACAGCGGGATT...CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
CDS-3UTR CCA 90 bp GAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: ETGMPTLRRLSDRSRVKLCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...CAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CCA 90 bp CCGATGTGCCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PMCLPGQVGVPDNSNTLDQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...GTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCACATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGAGTCTCTAAAGAGCTaGAGCTACAAGAAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: NPVETGMPTLRRLSDRSRESLKS*SYKKPR
Trigger: CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTC...CCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp ACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGCAGAGTCTCTAAAGAGCTaGAGCTACAAGAAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: TVPGSSCITARWKRWSEAESLKS*SYKKPR
Trigger: CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTC...TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp AGCAACTGTCTTTATTGTGAGTGTCTGACCAGGCTCCTACTTGGCCTTCTGGTCGACCAGGCTCCTACTTaGCCTTCTGGTCTACCTCTC +
Preference number: 4 (lower is better)
Translates to: SNCLYCECLTRLLLGLLVDQAPT*PSGLPL
Trigger: GAGAGGTAGACCAGAAGGCCAAGTAGGAGCCTGGTC...GACCAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAGACAGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR TCA 90 bp AGCAACTGTCTTTATTGTGAGTGTCTGACCAGGCTCCTACTTGGCCTTCTGGTCTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGT +
Preference number: 4 (lower is better)
Translates to: SNCLYCECLTRLLLGLLVWWCQG*TDPKPC
Trigger: ACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCA...GACCAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAGACAGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR TCA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATTATGAAGAGTGGGGATaGGTGGCATTTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHYEEWG*VAFAGI
Trigger: TATCCCAGCAAATGCCACTCATCCCCACTCTTCATA...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKQHLLQ*IHFGGA
Trigger: GGCACCACCAAAGTGGATGCACTGAAGAAGATGTTG...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp AGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGCAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RLSDRSRVKLHHCKVETMQHLLQ*IHFGGA
Trigger: GGCACCACCAAAGTGGATGCACTGAAGAAGATGTTG...CATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHQHLLQ*IHFGGA
Trigger: GGCACCACCAAAGTGGATGCACTGAAGAAGATGTTG...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR GCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGGGGATGAGTGGCATTTaGTGGGATATGGGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKGMSGI*WDMGVK
Trigger: CTTTACACCCATATCCCAGCAAATGCCACTCATCCC...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATTCAGCCAGTCTAGAATaGCAGAGGGTTTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHSASLE*QRVLFQ
Trigger: CTGGAACAAAACCCTCTGGCATTCTAGACTGGCTGA...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR GCA 90 bp ATGAAGAGTGGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGCGCCTCTCCACCAGCTaGAGCTGTCAGGACCTGTAC +
Preference number: 4 (lower is better)
Translates to: MKSGDEWHLLGYGCKVDKRLSTS*SCQDLY
Trigger: GTACAGGTCCTGACAGCTGCAGCTGGTGGAGAGGCG...CTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCCACTCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp TGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGAGAGTCCGGCCTCTCTaGTGTTCCTGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: WHLLGYGCKVDKVMKVQQRVRPL*CSCRPR
Trigger: GCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCT...CTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGGAGTCTCTAAAGAGCTaGAGCTACAAGAAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: ETGMPTLRRLSDRSRVKLESLKS*SYKKPR
Trigger: CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTC...CAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp AGGAGGACCAAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGAGCAATATTCTTTTGTaGCTTTTGAGTTTCATGCGC +
Preference number: 4 (lower is better)
Translates to: RRTKEARVFLAWAEMGSESNILL*LLSFMR
Trigger: GCGCATGAAACTCAAAAGCCACAAAAGAATATTGCT...CTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTTGGTCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR TCA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFCTFHG*AARARW
Trigger: CCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACA...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp ACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATAGTCCTCTTAAGCTCTaGCCGGCAACCCAACCCCGT +
Preference number: 4 (lower is better)
Translates to: TRSLGRVRVTNVSMKSGDSPLKL*PATQPR
Trigger: ACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACT...ATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp ACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATTCTGCCTCAGCCTCCTaGGTAGCTGGGATTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TRSLGRVRVTNVSMKSGDSASAS*VAGIAG
Trigger: ACCTGCAATCCCAGCTACTCAGGAGGCTGAGGCAGA...ATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR TCA 90 bp CTTTATTGTGAGTGTCTGACCAGGCTCCTACTTGGCCTTCTGGTCTACCTCTCTTTTATTGTGAGTGTCTaGCCAGGCTCCTACTTGGCC +
Preference number: 4 (lower is better)
Translates to: LYCECLTRLLLGLLVYLSFIVSV*PGSYLA
Trigger: GGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAA...AGAGAGGTAGACCAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR GCA 90 bp CCAGATAACAGCAACACATTGGACAACGGCCAACCTGTAATGAAGGGGGACCAGCAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PDNSNTLDNGQPVMKGDQQHLLQ*IHFGGA
Trigger: GGCACCACCAAAGTGGATGCACTGAAGAAGATGTTG...CTGGTCCCCCTTCATTACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415514.5
ENST00000426513.6
CDS-3UTR GCA 90 bp ACTGAGGCACCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 4 (lower is better)
Translates to: TEAPYKGFRESLKSWSYKVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...CTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGGTGCCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
CDS-3UTR GCA 90 bp GGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCTGTAGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 4 (lower is better)
Translates to: GQVGVPDNSNTLDNGQPVVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426513.6
CDS-3UTR GCA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCGTTCCAGGGTCAAGCTaGATCACTGCAAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCVPGSS*ITARWK
Trigger: TTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAAC...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTCAGATATTTATGGAGTaGCTAGTATGTGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: CRVLVLLSSDRQPNPVETQIFME*LVCGGN
Trigger: ATTCCCACCACATACTAGGCACTCCATAAATATCTG...AGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GCTACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGAATCCCGCTGTAGTTTaGCCCAGTTGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ATRSLGRVRVTNVSMKSGNPAVV*PSCPGL
Trigger: CAGCCCAGGACAACTGGGCCAAACTACAGCGGGATT...CCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCTGTATGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GQVGVPDNSNTLDNGQPVCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426513.6
CDS-3UTR CCA 90 bp ACTGAGGCACCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAAGAGTGGGGATGAGTaGCATTTGCTGGGATATGGG +
Preference number: 4 (lower is better)
Translates to: TEAPYKGFRESLKSWSYKKSGDE*HLLGYG
Trigger: CCCATATCCCAGCAAATGCCACTCATCCCCACTCTT...CTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGGTGCCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
CDS-3UTR CCA 90 bp CCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAAGCCTAGGAAGAGTGGGGATGAGTaGCATTTGCTGGGATATGGG +
Preference number: 4 (lower is better)
Translates to: PYKGFRESLKSWSYKKPRKSGDE*HLLGYG
Trigger: CCCATATCCCAGCAAATGCCACTCATCCCCACTCTT...CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
CDS-3UTR CCA 90 bp TGCCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCGAGTCTCTAAAGAGCTaGAGCTACAAGAAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: CLPGQVGVPDNSNTLDNGESLKS*SYKKPR
Trigger: CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTC...GCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp ACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGAT +
Preference number: 4 (lower is better)
Translates to: TRSLGRVRVTNVSMKSGDVETME*GRLRAD
Trigger: ATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCAC...ATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp GCTACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: ATRSLGRVRVTNVSMKSGFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...CCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp ATATTTACTGAGGCACCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCCTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTT +
Preference number: 4 (lower is better)
Translates to: IFTEAPYKGFRESLKSWSLVCPL*GGCLTV
Trigger: AACGGTCAGACAACCTCCTCAAAGTGGGCATACCAG...GCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGGTGCCTCAGTAAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
CDS-3UTR TCA 90 bp TATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAAGCCTAGGCAGTATGAAGAGTGGGGATaGGTGGCATTTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: YKGFRESLKSWSYKKPRQYEEWG*VAFAGI
Trigger: TATCCCAGCAAATGCCACTCATCCCCACTCTTCATA...CTGCCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
CDS-3UTR TCA 90 bp TGTAATGAAGGGGGACCAGGTAGAAGTTGGCTAACTGCACAGCAGGCCATAGATTATGAAGAGTGGGGATaGGTGGCATTTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: CNEGGPGRSWLTAQQAIDYEEWG*VAFAGI
Trigger: TATCCCAGCAAATGCCACTCATCCCCACTCTTCATA...ATCTATGGCCTGCTGTGCAGTTAGCCAACTTCTACCTGGTCCCCCTTCATTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426513.6
CDS-3UTR TCA 90 bp CTTTATTGTGAGTGTCTGACCAGGCTCCTACTTGGCCTTCTGGTCTACCTCTCTCAACTGTCTTTATTGTaGGTGTCTGACCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LYCECLTRLLLGLLVYLSQLSLL*VSDQAP
Trigger: AGGAGCCTGGTCAGACACTCACAATAAAGACAGTTG...AGAGAGGTAGACCAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR TCA 90 bp ATGTGCCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGCCTTTTGTGGCTTTTaGGTTTCATGCGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: MCLPGQVGVPDNSNTLDNAFCGF*VSCAEG
Trigger: GCCTTCTGCGCATGAAACTCAAAAGCCACAAAAGGC...GTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415514.5
CDS-3UTR GCA 90 bp ATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGCTTAGAGCCGATGTaGCTTCCAGGACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: IKGSKAVSVHFRVKRGIAGLEPM*LPGQVG
Trigger: TCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCC...TGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGCAGATATTTATGGAGTaGCTAGTATGTGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: NPVETGMPTLRRLSDRSRQIFME*LVCGGN
Trigger: ATTCCCACCACATACTAGGCACTCCATAAATATCTG...CCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCAGATATTTATGGAGTaGCTAGTATGTGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: VLVLLSSDRQPNPVETGMQIFME*LVCGGN
Trigger: ATTCCCACCACATACTAGGCACTCCATAAATATCTG...CATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TTCAGCAACTGTCTTTATTGTGAGTGTCTGACCAGGCTCCTACTTGGCCTTCTGCTGTCCCTCCAGATATaGCATCAAAGACGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: FSNCLYCECLTRLLLGLLLSLQI*HQRRSS
Trigger: TGAGCTCCGTCTTTGATGGCATATCTGGAGGGACAG...CAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAGACAGTTGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR CCA 90 bp ATATTTACTGAGGCACCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: IFTEAPYKGFRESLKSWSARWKR*SEAGLE
Trigger: CTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGC...GCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGGTGCCTCAGTAAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
CDS-3UTR CCA 90 bp CTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGAGTGGCATGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: LGRVRVTNVSMKSGDEWHARWKR*SEAGLE
Trigger: CTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGC...ATGCCACTCATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGCAACCCCGTGGAAACTaGTATGCCCACTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GDEWHLLGYGCKVDKVMKQPRGN*YAHFEE
Trigger: CTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTG...CTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp ACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: TRSLGRVRVTNVSMKSGDGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...ATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp ATGTGCCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACAAGAGTGGGGATGAGTaGCATTTGCTGGGATATGGG +
Preference number: 4 (lower is better)
Translates to: MCLPGQVGVPDNSNTLDNKSGDE*HLLGYG
Trigger: CCCATATCCCAGCAAATGCCACTCATCCCCACTCTT...GTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp ATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTCTCCACCAGCTGCTGTaGGATAATGTCACCCAGGCC +
Preference number: 4 (lower is better)
Translates to: IIKGSKAVSVHFRVKRGILHQLL*DNVTQA
Trigger: GGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAG...AATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000405076.5
ENST00000405983.5
CDS-3UTR TCA 90 bp ATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTCCAGTTGTCCTGGGCTaGCAGTCCATTAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: IIKGSKAVSVHFRVKRGIPVVLG*QSIKCP
Trigger: GGGGCACTTAATGGACTGTCAGCCCAGGACAACTGG...AATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp ACTATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCGTGGAAACGATGGAGTaGGGCAGGCTTAGAGCCGAT +
Preference number: 4 (lower is better)
Translates to: TIIKGSKAVSVHFRVKRGVETME*GRLRAD
Trigger: ATCGGCTCTAAGCCTGCCTCACTCCATCGTTTCCAC...GCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR TCA 90 bp ACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATTTTGAGGAGGTTGTCTaGCCGTTCCAGGGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: TRSLGRVRVTNVSMKSGDFEEVV*PFQGQA
Trigger: AGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAA...ATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TGGGTGCAGTTCAGCAACTGTCTTTATTGTGAGTGTCTGACCAGGCTCCTACTTCAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: WVQFSNCLYCECLTRLLLQHLLQ*IHFGGA
Trigger: GGCACCACCAAAGTGGATGCACTGAAGAAGATGTTG...AAGTAGGAGCCTGGTCAGACACTCACAATAAAGACAGTTGCTGAACTGCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR GCA 90 bp TGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGGGCTTAGAGCCGATGTaGCTTCCAGGACAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: WHLLGYGCKVDKVMKVQQGLEPM*LPGQVG
Trigger: TCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCC...CTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCAGATATTTATGGAGTaGCTAGTATGTGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKQIFME*LVCGGN
Trigger: ATTCCCACCACATACTAGGCACTCCATAAATATCTG...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTCAGATATTTATGGAGTaGCTAGTATGTGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: CLTVPGSSCITARWKRWSQIFME*LVCGGN
Trigger: ATTCCCACCACATACTAGGCACTCCATAAATATCTG...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCGTGACACATGCGAAGTaGCTAAAATGGATCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCVTHAK*LKWIKC
Trigger: GCACTTGATCCATTTTAGGCACTTCGCATGTGTCAC...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CCA 90 bp CTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTATGAGAGTCCGGCCTCTCTaGTGTTCCTGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: LGYGCKVDKVMKVQQIFMRVRPL*CSCRPR
Trigger: GCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCT...CATAAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp ACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: TRSLGRVRVTNVSMKSGDARWKR*SEAGLE
Trigger: CTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGC...ATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp TGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: WHLLGYGCKVDKVMKVQQGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...CTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp TGGGTGCAGTTCAGCAACTGTCTTTATTGTGAGTGTCTGACCAGGCTCCTACTTTCCTACTTGGCCTTCTaGTCTACCTCTCTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: WVQFSNCLYCECLTRLLLSYLAF*STSLSN
Trigger: GTTAGACAGAGAGGTAGACCAGAAGGCCAAGTAGGA...AAGTAGGAGCCTGGTCAGACACTCACAATAAAGACAGTTGCTGAACTGCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR TCA 90 bp TGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGCTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTT +
Preference number: 4 (lower is better)
Translates to: WHLLGYGCKVDKVMKVQQLVCPL*GGCLTV
Trigger: AACGGTCAGACAACCTCCTCAAAGTGGGCATACCAG...CTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp CTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGAGTGGCATCAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LGRVRVTNVSMKSGDEWHQHLLQ*IHFGGA
Trigger: GGCACCACCAAAGTGGATGCACTGAAGAAGATGTTG...ATGCCACTCATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GGAGCTACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGTTCCAGGGTCAAGCTaGATCACTGCAAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GATRSLGRVRVTNVSMKSVPGSS*ITARWK
Trigger: TTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAAC...ACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGTAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp ATGAAGAGTGGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGAGTGAAGAGGGGCATTaGAGGGTGCTAGTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: MKSGDEWHLLGYGCKVDKSEEGH*RVLVLL
Trigger: TAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT...CTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCCACTCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp CCAGATAACAGCAACACATTGGACAACGGCCAACCTGTAATGAAGGGGGACCAGCAGATATTTATGGAGTaGCTAGTATGTGGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PDNSNTLDNGQPVMKGDQQIFME*LVCGGN
Trigger: ATTCCCACCACATACTAGGCACTCCATAAATATCTG...CTGGTCCCCCTTCATTACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426513.6
CDS-3UTR CCA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTAGCCCAGGGACACCATaGTCAGAGTCCGGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFSPGTP*SESGLS
Trigger: AGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCT...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp ATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTAATCCCGCTGTAGTTTaGCCCAGTTGTCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IIKGSKAVSVHFRVKRGINPAVV*PSCPGL
Trigger: CAGCCCAGGACAACTGGGCCAAACTACAGCGGGATT...AATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAAGCAAGGTGGAAACGATaGAGTGAGGCAGGCTTAGAG +
Preference number: 4 (lower is better)
Translates to: EWHLLGYGCKVDKVMKVQARWKR*SEAGLE
Trigger: CTCTAAGCCTGCCTCACTCCATCGTTTCCACCTTGC...TTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp ACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATAAGAGTGGGGATGAGTaGCATTTGCTGGGATATGGG +
Preference number: 4 (lower is better)
Translates to: TRSLGRVRVTNVSMKSGDKSGDE*HLLGYG
Trigger: CCCATATCCCAGCAAATGCCACTCATCCCCACTCTT...ATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp GGAGCTACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTATAACAGCAACACATTaGACAACGGCCAACCCGCTG +
Preference number: 4 (lower is better)
Translates to: GATRSLGRVRVTNVSMKSITATH*TTANPL
Trigger: CAGCGGGTTGGCCGTTGTCCAATGTGTTGCTGTTAT...ACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGTAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402722.5
CDS-3UTR TCA 90 bp CTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTATGCCAGTTGTCCTGGGCTaGCAGTCCATTAAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LGYGCKVDKVMKVQQIFMPVVLG*QSIKCP
Trigger: GGGGCACTTAATGGACTGTCAGCCCAGGACAACTGG...CATAAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR TCA 90 bp ATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTCTGGTATGCCCACTTTaGGGAGGTTGTCTGACCGTT +
Preference number: 4 (lower is better)
Translates to: IIKGSKAVSVHFRVKRGILVCPL*GGCLTV
Trigger: AACGGTCAGACAACCTCCTCAAAGTGGGCATACCAG...AATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTGTATGCCCGCCAGAGTaGCATGCTTCCTGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFVCPPE*HASCQA
Trigger: GGCTTGACAGGAAGCATGGCACTCTGGCGGGCATAC...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233545.6
CDS-3UTR GCA 90 bp GAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAAGTCAAGCTGCATCACTaGAAGGTGGAAACGATGGAG +
Preference number: 4 (lower is better)
Translates to: EWHLLGYGCKVDKVMKVQVKLHH*KVETME
Trigger: CTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGAC...TTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAAAGTGAAGAGGGGCATTaGAGGGTGCTAGTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: EWHLLGYGCKVDKVMKVQSEEGH*RVLVLL
Trigger: TAAGAGGACTAGCACCCTGCAATGCCCCTCTTCACT...TTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp TGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: WHLLGYGCKVDKVMKVQQCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...CTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp ATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGAGTCTCTAAAGAGCTaGAGCTACAAGAAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: IKGSKAVSVHFRVKRGIAESLKS*SYKKPR
Trigger: CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTC...TGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp CTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGAGTGGCATTTCTTTGCACTGACATaGGTTGTGGTCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LGRVRVTNVSMKSGDEWHFFALT*VVVSAV
Trigger: AACAGCAGAGACCACAACCCATGTCAGTGCAAAGAA...ATGCCACTCATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CCA 90 bp CCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAAGCCTAGGGCGAAGTGCCTAAAATaGATCAAGTGCTTAATGCTT +
Preference number: 4 (lower is better)
Translates to: PYKGFRESLKSWSYKKPRAKCLK*IKCLML
Trigger: AAGCATTAAGCACTTGATCCATTTTAGGCACTTCGC...CCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR TCA 90 bp ACTATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCTATGAAGAGTGGGGATaGGTGGCATTTGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: TIIKGSKAVSVHFRVKRGYEEWG*VAFAGI
Trigger: TATCCCAGCAAATGCCACTCATCCCCACTCTTCATA...GCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp GAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: EWHLLGYGCKVDKVMKVQQHLLQ*IHFGGA
Trigger: GGCACCACCAAAGTGGATGCACTGAAGAAGATGTTG...TTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTGGCAACCCAACCCCGTaGAAACTGGTATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFGNPTP*KLVCPL
Trigger: AAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCC...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGAACACTTGGCTTCTTTaGACTGACATGGGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: WHLLGYGCKVDKVMKVQQNTWLL*TDMGCG
Trigger: ACCACAACCCATGTCAGTGCAAAGAAGCCAAGTGTT...CTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CCA 90 bp ATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAATGAAGTGGGTATATTaGGAGGGAGGGTTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: IKGSKAVSVHFRVKRGIAMKWVY*EGGLER
Trigger: TCTTTCTAACCCTCCCTCCCAATATACCCACTTCAT...TGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CCA 90 bp ATATTTACTGAGGCACCATATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCATAACAGCAACACATTaGACAACGGCCAACATAGTA +
Preference number: 4 (lower is better)
Translates to: IFTEAPYKGFRESLKSWSITATH*TTANIV
Trigger: TACTATGTTGGCCGTTGTCCAATGTGTTGCTGTTAT...GCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATATGGTGCCTCAGTAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402310.5
3UTR CAA 72 bp ACAAATGTGTCTATGAAGAGTGGGGATGAGTGGCATTaGCTGGGATATGGGTGTAAAGTTGATAAGGTCATG +
Preference number: 4 (lower is better)
Translates to: TNVSMKSGDEWH*LGYGCKVDKVM
Trigger: CATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCCACTCTTCATAGACACATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp CTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTATGTGCATCACTGCAAGGTaGAAACGATGGAGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGYGCKVDKVMKVQQIFMCITAR*KRWSEA
Trigger: TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCA...CATAAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CCA 90 bp ACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGGCATTTCAAGACCATaGTTTGCCTATTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: TRSLGRVRVTNVSMKSGDGISRP*FAYFSS
Trigger: TGATGAGAAATAGGCAAACCATGGTCTTGAAATGCC...ATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR GCA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTCAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFQHLLQ*IHFGGA
Trigger: GGCACCACCAAAGTGGATGCACTGAAGAAGATGTTG...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR GCA 90 bp TGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGCATACAAGTGACACATaGGAAGTGCCTAAAATGGAT +
Preference number: 4 (lower is better)
Translates to: WHLLGYGCKVDKVMKVQQHTSDT*EVPKMD
Trigger: ATCCATTTTAGGCACTTCGCATGTGTCACTTGTATG...CTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CCA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTTGGAAAAAGACACTCTaGCGAAGGGAGGAATATGAG +
Preference number: 4 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFWKKTL*RREEYE
Trigger: CTCATATTCCTCCCTTCGCCAGAGTGTCTTTTTCCA...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS GCA 90 bp ACGGGTGAGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGTGCCATaGTTCCTGTCAAGCCAAGAGGAGAGGGGGTCACCCCCACCGTCC +
Preference number: 5 (lower is better)
Translates to: TGERPGPAGMPARVP*FLSSQEERGSPPPS
Trigger: GGACGGTGGGGGTGACCCCCTCTCCTCTTGGCTTGACAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000233545.6
CDS TCA 90 bp AGGCCCATCAGGGACCCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGTGCCATGCTT +
Preference number: 5 (lower is better)
Translates to: RPIRDPAVRTCTFHG*AARARWYARQSAML
Trigger: AAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGGTCCCTGATGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000403262.6
ENST00000405076.5
ENST00000617583.4
ENST00000621183.4
CDS TCA 90 bp GCCTCTCCACCAGCTGCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGTGCCATGCTT +
Preference number: 5 (lower is better)
Translates to: ASPPAAAVRTCTFHG*AARARWYARQSAML
Trigger: AAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGCAGCTGGTGGAGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402722.5
ENST00000426513.6
ENST00000621470.4
CDS TCA 90 bp CATCTCCTGGGATGGGCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGTGCCATGCTT +
Preference number: 5 (lower is better)
Translates to: HLLGWAAVRTCTFHG*AARARWYARQSAML
Trigger: AAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGCCCATCCCAGGAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405983.5
CDS TCA 90 bp CTTCAGTCCAGGAGGCCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGTGCCATGCTT +
Preference number: 5 (lower is better)
Translates to: LQSRRPAVRTCTFHG*AARARWYARQSAML
Trigger: AAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGCCTCCTGGACTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428910.5
CDS GCA 90 bp CAGGACCTGTACTTTCCACGGGTGAGCGGCCAGGGCCCGCTGGTATaGCCGCCAGAGTGCCATGCTTCCTGTCAAGCCAAGAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: QDLYFPRVSGQGPLV*PPECHASCQAKRRG
Trigger: CCCTCTCCTCTTGGCTTGACAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233545.6
CDS GCA 90 bp CAGCCCAGGGACACCATGGTCAGAGTCCGGCCTCTCTGGTGTTCCTaGAGACCCCGCCTCTCCACCAGCTGCAGCTGTCAGGACCTGTAC +
Preference number: 5 (lower is better)
Translates to: QPRDTMVRVRPLWCS*RPRLSTSCSCQDLY
Trigger: GTACAGGTCCTGACAGCTGCAGCTGGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCTGACCATGGTGTCCCTGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402722.5
ENST00000426513.6
ENST00000621470.4
CDS GCA 90 bp GTCCGGCCTCTCTGGTGTTCCTGCAGACCCCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCCAGGCCCATCAGGGACCCTCGTGGG +
Preference number: 5 (lower is better)
Translates to: VRPLWCSCRPRLSTS*CEIMSPRPIRDPRG
Trigger: CCCACGAGGGTCCCTGATGGGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGGCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428910.5
CDS GCA 90 bp TGGCGCAGGTGTGACATCATGCCCCTGGGTAGGTGCCAGTTCTCATaGCGTCACTCCCGAACAGATCCAGCGGCCAGGGGGAAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: WRRCDIMPLGRCQFS*RHSRTDPAARGKGA
Trigger: GGCTCCCTTCCCCCTGGCCGCTGGATCTGTTCGGGAGTGACGGCATGAGAACTGGCACCTACCCAGGGGCATGATGTCACACCTGCGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486898.1
CDS TCA 90 bp CTTCCTCCCCAGAAGTCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGTGCCATGCTT +
Preference number: 5 (lower is better)
Translates to: LPPQKSAVRTCTFHG*AARARWYARQSAML
Trigger: AAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGACTTCTGGGGAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399052.8
ENST00000415514.5
ENST00000486898.1
ENST00000622003.4
CDS TCA 90 bp CTAGAGGGACACTCACCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGTGCCATGCTT +
Preference number: 5 (lower is better)
Translates to: LEGHSPAVRTCTFHG*AARARWYARQSAML
Trigger: AAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGAGTGTCCCTCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494436.1
CDS GCA 90 bp GTCCGGCCTCTCTGGTGTTCCTGCAGACCCCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCCAGGCCCATCAGGGACCCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: VRPLWCSCRPRLSTS*CEIMSPRPIRDPAV
Trigger: GACAGCTGGGTCCCTGATGGGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGGCCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000403262.6
ENST00000405076.5
ENST00000617583.4
ENST00000621183.4
CDS GCA 90 bp GCGAGCAGATGCTGGCGCAGGTGTGACATCATGCCCCTGGGTAGGTaGCAGTTCTCATGCCGTCACTCCCGAACAGATCCAGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ASRCWRRCDIMPLGR*QFSCRHSRTDPAAR
Trigger: CCTGGCCGCTGGATCTGTTCGGGAGTGACGGCATGAGAACTGGCACCTACCCAGGGGCATGATGTCACACCTGCGCCAGCATCTGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486898.1
CDS GCA 90 bp GTCCGGCCTCTCTGGTGTTCCTGCAGACCCCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCCAGGCCCATCAGGGACCCTATGCAG +
Preference number: 5 (lower is better)
Translates to: VRPLWCSCRPRLSTS*CEIMSPRPIRDPMQ
Trigger: CTGCATAGGGTCCCTGATGGGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGGCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405983.5
ENST00000616446.1
ENST00000616707.1
CDS CCA 90 bp TCTTGGAGTGAGGAGCAGGAAGCGTGTCCTTCAGTCCAGGAGGCCTaGGTCGGCAGGTATAGCTACTGGCATGGGGCCAGCAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SWSEEQEACPSVQEA*VGRYSYWHGASSAA
Trigger: GGCAGCACTGCTGGCCCCATGCCAGTAGCTATACCTGCCGACCCAGGCCTCCTGGACTGAAGGACACGCTTCCTGCTCCTCACTCCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399052.8
ENST00000415514.5
ENST00000486898.1
ENST00000622003.4
CDS GCA 90 bp GTCCGGCCTCTCTGGTGTTCCTGCAGACCCCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCCAGGCCCATCAGGGACCTTTTGTGG +
Preference number: 5 (lower is better)
Translates to: VRPLWCSCRPRLSTS*CEIMSPRPIRDLLW
Trigger: CCACAAAAGGTCCCTGATGGGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGGCCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622003.4
CDS GCA 90 bp GTGAGGGTGGTGCAGTGGGGCAAGCCTCTGGCTTCCAAATCAGTCTaGCCTGGTCCCACTCAAGTCCTAGAGGGACACTCACCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: VRVVQWGKPLASKSV*PGPTQVLEGHSPAV
Trigger: GACAGCTGGTGAGTGTCCCTCTAGGACTTGAGTGGGACCAGGGCAGACTGATTTGGAAGCCAGAGGCTTGCCCCACTGCACCACCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494436.1
CDS CCA 90 bp GGTGGTGCAGTGGGGCAAGCCTCTGGCTTCCAAATCAGTCTGCCCTaGTCCCACTCAAGTCCTAGAGGGACACTCACCAGCTGTCAGGAC +
Preference number: 5 (lower is better)
Translates to: GGAVGQASGFQISLP*SHSSPRGTLTSCQD
Trigger: GTCCTGACAGCTGGTGAGTGTCCCTCTAGGACTTGAGTGGGACCAGGGCAGACTGATTTGGAAGCCAGAGGCTTGCCCCACTGCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494436.1
CDS-3UTR CAA 90 bp AAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGGTCAGTGGCCCATCATTCTGCTCCTaGTCACCTCGTGGGGATGGC +
Preference number: 5 (lower is better)
Translates to: KEARVFLAWAEMGSEVSGPSFCS*SPRGDG
Trigger: GCCATCCCCACGAGGTGACAAGGAGCAGAATGATGG...GCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS TCA 90 bp CACTCCCGAACAGATCCAGCGGCCAGGGGGAAGGGAGCCTGCCTCTaGGCAGATCAATTTGGGACCACTTCCTGCCCACTAGTGGAAAAG +
Preference number: 5 (lower is better)
Translates to: HSRTDPAARGKGACL*ADQFGTTSCPLVEK
Trigger: CTTTTCCACTAGTGGGCAGGAAGTGGTCCCAAATTGATCTGCTCAGAGGCAGGCTCCCTTCCCCCTGGCCGCTGGATCTGTTCGGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486898.1
CDS-3UTR CAA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS TCA 90 bp ATCTCCTGGGATGGGCTGCCATTCCAAGGAGGGAGGGACATCTGCTaGCCTCCACTGAGGCTCTGGTACTCTGAACCCCAGGGCTTCATT +
Preference number: 5 (lower is better)
Translates to: ISWDGLPFQGGRDIC*PPLRLWYSEPQGFI
Trigger: AATGAAGCCCTGGGGTTCAGAGTACCAGAGCCTCAGTGGAGGTCAGCAGATGTCCCTCCCTCCTTGGAATGGCAGCCCATCCCAGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CCA 90 bp GACCCTATGCAGGGTACACAGGTGTTGTCAGGACATCTCCTGGGATaGGCTGCCATTCCAAGGAGGGAGGGACATCTGCTGACCTCCACT +
Preference number: 5 (lower is better)
Translates to: DPMQGTQVLSGHLLG*AAIPRREGHLLTST
Trigger: AGTGGAGGTCAGCAGATGTCCCTCCCTCCTTGGAATGGCAGCCCATCCCAGGAGATGTCCTGACAACACCTGTGTACCCTGCATAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CCA 90 bp CCAGCCACTGTCCCTCCAGATATGCCATCAAAGACGGAGCTCAGGTaGGATGGAGACAAGGGTGGTAGAAGCAGGATCCTCCCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: PATVPPDMPSKTELR*DGDKGGRSRILPRE
Trigger: CTCCCTAGGGAGGATCCTGCTTCTACCACCCTTGTCTCCATCCCACCTGAGCTCCGTCTTTGATGGCATATCTGGAGGGACAGTGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS-3UTR CAA 90 bp CATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAACCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: HCRVLVLLSSDRQPNPVEPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...TTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp GACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: DRQPNPVETGMPTLRRLSPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...AGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp CCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PVETGMPTLRRLSDRSRVPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp TCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SDRQPNPVETGMPTLRRLPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...CAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS GCA 90 bp GGCTCCTACTTGGCCTTCTGGTCTACCTCTCTGTCTAACCTAGGCTaGAGCACCCCAGCCACTGTCCCTCCAGATATGCCATCAAAGACG +
Preference number: 5 (lower is better)
Translates to: GSYLAFWSTSLSNLG*STPATVPPDMPSKT
Trigger: CGTCTTTGATGGCATATCTGGAGGGACAGTGGCTGGGGTGCTGCAGCCTAGGTTAGACAGAGAGGTAGACCAGAAGGCCAAGTAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403262.6
ENST00000616707.1
CDS-3UTR CAA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 5 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRTGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp GGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGGGGATGAGTGGCATTaGCTGGGATATGGGTGTAAA +
Preference number: 5 (lower is better)
Translates to: GHCRVLVLLSSDRQPNPVGDEWH*LGYGCK
Trigger: TTTACACCCATATCCCAGCAAATGCCACTCATCCCC...CACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS TCA 90 bp ATGGGCTGCCATTCCAAGGAGGGAGGGACATCTGCTGACCTCCACTaGGGCTCTGGTACTCTGAACCCCAGGGCTTCATTGTGGAAACAA +
Preference number: 5 (lower is better)
Translates to: MGCHSKEGGTSADLH*GSGTLNPRASLWKQ
Trigger: TTGTTTCCACAATGAAGCCCTGGGGTTCAGAGTACCAGAGCCTCAGTGGAGGTCAGCAGATGTCCCTCCCTCCTTGGAATGGCAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CCA 90 bp CCAGCCACTGTCCCTCCAGATATGCCATCAAAGACGGAGCTCAGGTaGGATGGAGACAAGGGTGGTAGAAGCAGGATCCTCCCTGTAATG +
Preference number: 5 (lower is better)
Translates to: PATVPPDMPSKTELR*DGDKGGRSRILPVM
Trigger: CATTACAGGGAGGATCCTGCTTCTACCACCCTTGTCTCCATCCCACCTGAGCTCCGTCTTTGATGGCATATCTGGAGGGACAGTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR CAA 90 bp CCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCTTCAGTGCATCCACTTaGGTGGTGCCAGGGATGAAC +
Preference number: 5 (lower is better)
Translates to: PNPVETGMPTLRRLSDRSFSAST*VVPGMN
Trigger: GTTCATCCCTGGCACCACCAAAGTGGATGCACTGAA...GGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp TGGAGTGAGGCAGGCTTAGAGCCGATGTGCCTTCCAGGACAGGTAGGAGTTCCATTCAGTGCATCCACTTaGGTGGTGCCAGGGATGAAC +
Preference number: 5 (lower is better)
Translates to: WSEAGLEPMCLPGQVGVPFSAST*VVPGMN
Trigger: GTTCATCCCTGGCACCACCAAAGTGGATGCACTGAA...TGGAACTCCTACCTGTCCTGGAAGGCACATCGGCTCTAAGCCTGCCTCACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CAA 90 bp TCTACCTCTCTGTCTAACCTAGGCTGCAGCACCCCAGCCACTGTCCCTCCAGATTTCAGTGCATCCACTTaGGTGGTGCCAGGGATGAAC +
Preference number: 5 (lower is better)
Translates to: STSLSNLGCSTPATVPPDFSAST*VVPGMN
Trigger: GTTCATCCCTGGCACCACCAAAGTGGATGCACTGAA...ATCTGGAGGGACAGTGGCTGGGGTGCTGCAGCCTAGGTTAGACAGAGAGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403262.6
CDS-3UTR CAA 90 bp GGGCATTGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGATAACAGCAACACATaGGACAACGGCCAACCTGTA +
Preference number: 5 (lower is better)
Translates to: GHCRVLVLLSSDRQPNPVDNSNT*DNGQPV
Trigger: TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...CACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCAATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGGGGGATGAGTGGCATTaGCTGGGATATGGGTGTAAA +
Preference number: 5 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRGDEWH*LGYGCK
Trigger: TTTACACCCATATCCCAGCAAATGCCACTCATCCCC...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CAA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGGGGCTGAACTCTTTTaGAGACGGAGTCTCGCTCCG +
Preference number: 5 (lower is better)
Translates to: CLTVPGSSCITARWKRWSGAELF*RRSLAP
Trigger: CGGAGCGAGACTCCGTCTCAAAAAGAGTTCAGCCCC...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS TCA 90 bp GGGATGGAGACAAGGGTGGTAGAAGCAGGATCCTCCCTAGGGAGATaGAGAAGGTCAGTGGGCAGACACTCTGGGACAGTTTCCGGAAAT +
Preference number: 5 (lower is better)
Translates to: GMETRVVEAGSSLGR*RRSVGRHSGTVSGN
Trigger: ATTTCCGGAAACTGTCCCAGAGTGTCTGCCCACTGACCTTCTTCATCTCCCTAGGGAGGATCCTGCTTCTACCACCCTTGTCTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CCA 90 bp TTGTGGCTTTTGAGTTTCATGCGCAGAAGGCAGAGGGGCAAGAAGTaGCTTCTTGGAGTGAGGAGCAGGAAGCGTGTCCTTCAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LWLLSFMRRRQRGKK*LLGVRSRKRVLQSR
Trigger: CCTGGACTGAAGGACACGCTTCCTGCTCCTCACTCCAAGAAGCCACTTCTTGCCCCTCTGCCTTCTGCGCATGAAACTCAAAAGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399052.8
ENST00000415514.5
ENST00000428910.5
ENST00000486898.1
ENST00000622003.4
CDS-3UTR CAA 90 bp ACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGCATTCAGTGCATCCACTTaGGTGGTGCCAGGGATGAAC +
Preference number: 5 (lower is better)
Translates to: TVPGSSCITARWKRWSEAFSAST*VVPGMN
Trigger: GTTCATCCCTGGCACCACCAAAGTGGATGCACTGAA...TGCCTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp AGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGGATAACAGCAACACATaGGACAACGGCCAACCTGTA +
Preference number: 5 (lower is better)
Translates to: SSDRQPNPVETGMPTLRRDNSNT*DNGQPV
Trigger: TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...CCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp CAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 5 (lower is better)
Translates to: QPNPVETGMPTLRRLSDRTGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 5 (lower is better)
Translates to: NPVETGMPTLRRLSDRSRTGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...CCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp CCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCGGGGATGAGTGGCATTaGCTGGGATATGGGTGTAAA +
Preference number: 5 (lower is better)
Translates to: PNPVETGMPTLRRLSDRSGDEWH*LGYGCK
Trigger: TTTACACCCATATCCCAGCAAATGCCACTCATCCCC...GGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CAA 90 bp CTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTGAGGATAACAGCAACACATaGGACAACGGCCAACCCGCT +
Preference number: 5 (lower is better)
Translates to: LTVPGSSCITARWKRWSEDNSNT*DNGQPA
Trigger: AGCGGGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...CTCACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402722.5
CDS TCA 90 bp CCAACAACATCTTCTTCAGTGCATCCACTTTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGTACCAGCCTCCTACCACAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: PTTSSSVHPLWWCQG*TDPKPCTSLLPQGP
Trigger: TGGGCCCTGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAGAAGATGTTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000403262.6
ENST00000405983.5
ENST00000426513.6
ENST00000428910.5
ENST00000430991.5
ENST00000616446.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS TCA 90 bp CCAACAACATCTTCTTCAGTGCATCCACTTTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGTACCAGCCTCCTACCACAGGGCCCT +
Preference number: 5 (lower is better)
Translates to: PTTSSSVHPLWWCQG*TDPKPCTSLLPQGP
Trigger: AGGGCCCTGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAGAAGATGTTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357186.10
ENST00000475085.1
ENST00000616707.1
CDS TCA 90 bp GATGGCAAAGAACTAAGACCACTGTTGAGTCCACTGAAGCCCTGTTaGGGGGAGAACTTACCACAAAGCCACAGCCCAGGGACACCATGG +
Preference number: 5 (lower is better)
Translates to: DGKELRPLLSPLKPC*GENLPQSHSPGTPW
Trigger: CCATGGTGTCCCTGGGCTGTGGCTTTGTGGTAAGTTCTCCCCTCAACAGGGCTTCAGTGGACTCAACAGTGGTCTTAGTTCTTTGCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS-3UTR CAA 90 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGAACCGATCCAAAACCTaGTACCAGCCTCCTACCACA +
Preference number: 5 (lower is better)
Translates to: NPVETGMPTLRRLSDRSRNRSKT*YQPPTT
Trigger: TGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTT...CCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp TGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGGAGTTTCAGTGCATCCACTTaGGTGGTGCCAGGGATGAAC +
Preference number: 5 (lower is better)
Translates to: CLTVPGSSCITARWKRWSFSAST*VVPGMN
Trigger: GTTCATCCCTGGCACCACCAAAGTGGATGCACTGAA...ACTCCATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp ACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATTTCAGTGCATCCACTTaGGTGGTGCCAGGGATGAAC +
Preference number: 5 (lower is better)
Translates to: TGMPTLRRLSDRSRVKLHFSAST*VVPGMN
Trigger: GTTCATCCCTGGCACCACCAAAGTGGATGCACTGAA...ATGCAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp TGCAGGGTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGATAACAGCAACACATaGGACAACGGCCAACCTGTA +
Preference number: 5 (lower is better)
Translates to: CRVLVLLSSDRQPNPVETDNSNT*DNGQPV
Trigger: TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...AGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCACCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp GTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTGATAACAGCAACACATaGGACAACGGCCAACCTGTA +
Preference number: 5 (lower is better)
Translates to: VLLSSDRQPNPVETGMPTDNSNT*DNGQPV
Trigger: TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...AGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp GACCGGCAACCCAACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGATAACAGCAACACATaGGACAACGGCCAACCTGTA +
Preference number: 5 (lower is better)
Translates to: DRQPNPVETGMPTLRRLSDNSNT*DNGQPV
Trigger: TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...AGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTTGGGTTGCCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp GAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGCTGACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 5 (lower is better)
Translates to: ETGMPTLRRLSDRSRVKLTGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...CAGCTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp AGGTTGTCTGACCGTTCCAGGGTCAAGCTGCATCACTGCAAGGTGGAAACGATGACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 5 (lower is better)
Translates to: RLSDRSRVKLHHCKVETMTGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...CATCGTTTCCACCTTGCAGTGATGCAGCTTGACCCTGGAACGGTCAGACAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS TCA 90 bp CCAACAACATCTTCTTCAGTGCATCCACTTTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGTACCAGCCTCCTACCACAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: PTTSSSVHPLWWCQG*TDPKPCTSLLPQGL
Trigger: AAGGCCCTGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAGAAGATGTTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415514.5
CDS-3UTR CAA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGAACCGATCCAAAACCTaGTACCAGCCTCCTACCACA +
Preference number: 5 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKNRSKT*YQPPTT
Trigger: TGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTT...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp AACCCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGATAACAGCAACACATaGGACAACGGCCAACCTGTA +
Preference number: 5 (lower is better)
Translates to: NPVETGMPTLRRLSDRSRDNSNT*DNGQPV
Trigger: TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...CCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
ENST00000430991.5
CDS-3UTR CAA 90 bp CGGCCAACCTGTAATGAAGGGGGACCAGGTAGAAGTTGGCTAACTGCACAGCAGGATAACAGCAACACATaGGACAACGGCCAACCTGTA +
Preference number: 5 (lower is better)
Translates to: RPTCNEGGPGRSWLTAQQDNSNT*DNGQPV
Trigger: TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...CTGCTGTGCAGTTAGCCAACTTCTACCTGGTCCCCCTTCATTACAGGTTGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415514.5
ENST00000426513.6
CDS-3UTR CAA 90 bp CCCGTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCTATGAAGTGGGTATATaGGGAGGGAGGGTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: PVETGMPTLRRLSDRSRVYEVGI*GGRVRK
Trigger: CTTTCTAACCCTCCCTCCCAATATACCCACTTCATA...GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CAA 90 bp GGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGCCAACCCGCTGTAGTTaGGCCCAGTTGTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GDEWHLLGYGCKVDKVMKPTRCS*AQLSWA
Trigger: AGCCCAGGACAACTGGGCCAAACTACAGCGGGTTGG...CTTCATGACCTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402722.5
CDS CCA 90 bp CTCCAAGCAGCTCCCACTTCCCAGTATGAATGTCACACACAGACTTaGGTTCAAAGAGCACATTCCTGCACCATAACCCTCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LQAAPTSQYECHTQT*VQRAHSCTITLSSS
Trigger: AGAGGAGCTGAGGGTTATGGTGCAGGAATGTGCTCTTTGAACCCAAGTCTGTGTGTGACATTCATACTGGGAAGTGGGAGCTGCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000616707.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS-3UTR CAA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCTTCAGTGCATCCACTTaGGTGGTGCCAGGGATGAAC +
Preference number: 5 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCFSAST*VVPGMN
Trigger: GTTCATCCCTGGCACCACCAAAGTGGATGCACTGAA...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp CTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGAGTGGCATCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LGRVRVTNVSMKSGDEWHPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...ATGCCACTCATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CAA 90 bp TGCCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCGGGGATGAGTGGCATTaGCTGGGATATGGGTGTAAA +
Preference number: 5 (lower is better)
Translates to: CLPGQVGVPDNSNTLDNGGDEWH*LGYGCK
Trigger: TTTACACCCATATCCCAGCAAATGCCACTCATCCCC...GCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CAA 90 bp AAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGGTCAGTGGCGACAGCAATATTCTTTaGTGGCTTTTGAGTTTCATG +
Preference number: 5 (lower is better)
Translates to: KEARVFLAWAEMGSEVSGDSNIL*WLLSFM
Trigger: CATGAAACTCAAAAGCCACAAAAGAATATTGCTGTC...GCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS-3UTR CAA 90 bp AAGGAGGCCAGGGTATTCCTGGCATGGGCTGAGATGGGCTCAGAGGTCAGTGGCTTTAATGATGAGTCTTaGAGAGATGAGATGACTTGG +
Preference number: 5 (lower is better)
Translates to: KEARVFLAWAEMGSEVSGFNDES*RDEMTW
Trigger: CCAAGTCATCTCATCTCTCAAAGACTCATCATTAAA...GCCACTGACCTCTGAGCCCATCTCAGCCCATGCCAGGAATACCCTGGCCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS TCA 90 bp GAGCTGGATCCCAATAGGGTAGTGCAACACTTGGCTTCTTTGCACTaGCATGGGTTGTGGTCTCTGCTGTTGATAGACTTGGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: ELDPNRVVQHLASLH*HGLWSLLLIDLGFL
Trigger: GAGGAAACCCAAGTCTATCAACAGCAGAGACCACAACCCATGTCAGTGCAAAGAAGCCAAGTGTTGCACTACCCTATTGGGATCCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS GCA 90 bp CCACTCTGTTCTCCTGCTCACCTGATCCAACAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCCAGGGATGAACCGATCCAAAACCTT +
Preference number: 5 (lower is better)
Translates to: PLCSPAHLIQQHLLQ*IHFGGARDEPIQNL
Trigger: AAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAGAAGATGTTGTTGGATCAGGTGAGCAGGAGAACAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CCA 90 bp CCTGGCCCTACCCCAACTTCTGCACACAAGAAAAAGGTGAACAGTTaGGTGATGGCTTCCCTATTTATGGTGCCCATCCTGGGAATGAAA +
Preference number: 5 (lower is better)
Translates to: PGPTPTSAHKKKVNS*VMASLFMVPILGMK
Trigger: TTTCATTCCCAGGATGGGCACCATAAATAGGGAAGCCATCACCCAACTGTTCACCTTTTTCTTGTGTGCAGAAGTTGGGGTAGGGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616707.1
ENST00000617583.4
CDS CCA 90 bp AGGATCCTCCCTAGGGAGATGAAGAAGGTCAGTGGGCAGACACTCTaGGACAGTTTCCGGAAATGGCAAGACATTCTGAATAACACGCTT +
Preference number: 5 (lower is better)
Translates to: RILPREMKKVSGQTL*DSFRKWQDILNNTL
Trigger: AAGCGTGTTATTCAGAATGTCTTGCCATTTCCGGAAACTGTCCCAGAGTGTCTGCCCACTGACCTTCTTCATCTCCCTAGGGAGGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS-3UTR CAA 90 bp ATGTGCCTTCCAGGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACTTCAGTGCATCCACTTaGGTGGTGCCAGGGATGAAC +
Preference number: 5 (lower is better)
Translates to: MCLPGQVGVPDNSNTLDNFSAST*VVPGMN
Trigger: GTTCATCCCTGGCACCACCAAAGTGGATGCACTGAA...GTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCCTGGAAGGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402722.5
ENST00000415514.5
ENST00000426513.6
CDS-3UTR CAA 90 bp TATAAAGGGTTCCGGGAGTCTCTAAAGAGCTGGAGCTACAAGAAGCCTAGGCAGGGGGATGAGTGGCATTaGCTGGGATATGGGTGTAAA +
Preference number: 5 (lower is better)
Translates to: YKGFRESLKSWSYKKPRQGDEWH*LGYGCK
Trigger: TTTACACCCATATCCCAGCAAATGCCACTCATCCCC...CTGCCTAGGCTTCTTGTAGCTCCAGCTCTTTAGAGACTCCCGGAACCCTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
CDS-3UTR CAA 90 bp GTGCTAGTCCTCTTAAGCTCTGACCGGCAACCCAACCCCGTGGAAACTGGTATGACCTTGAAGGATGAATaGAACTCAGGTGAAGATGGT +
Preference number: 5 (lower is better)
Translates to: VLVLLSSDRQPNPVETGMTLKDE*NSGEDG
Trigger: ACCATCTTCACCTGAGTTCAATTCATCCTTCAAGGT...CATACCAGTTTCCACGGGGTTGGGTTGCCGGTCAGAGCTTAAGAGGACTAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CAA 90 bp ATGAAGAGTGGGGATGAGTGGCATTTGCTGGGATATGGGTGTAAAGTTGATAAGTTCCTCCCTTCCCCCTaGGGAACACAAGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: MKSGDEWHLLGYGCKVDKFLPSP*GTQGRE
Trigger: TTCCCTCCCTTGTGTTCCCAAGGGGGAAGGGAGGAA...CTTATCAACTTTACACCCATATCCCAGCAAATGCCACTCATCCCCACTCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CAA 90 bp GGACAGGTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCTGTAGGCCTTTTGTGGCTTTaGAGTTTCATGCGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GQVGVPDNSNTLDNGQPVGLLWL*SFMRRR
Trigger: CCTTCTGCGCATGAAACTCAAAAGCCACAAAAGGCC...TACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTACCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415514.5
CDS TCA 90 bp AGTGCCACTATCTTTTTGGGTGCAGTTCAGCAACTGTCTTTATTGTaGGTGTCTGACCAGGCTCCTACTTGGCCTTCTGGTCTACCTCTC +
Preference number: 5 (lower is better)
Translates to: SATIFLGAVQQLSLL*VSDQAPTWPSGLPL
Trigger: GAGAGGTAGACCAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAGACAGTTGCTGAACTGCACCCAAAAAGATAGTGGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS-3UTR CAA 90 bp GTAGGAGTTCCAGATAACAGCAACACATTGGACAACGGCCAACCTGTAATGAAGTTCAGTGCATCCACTTaGGTGGTGCCAGGGATGAAC +
Preference number: 5 (lower is better)
Translates to: VGVPDNSNTLDNGQPVMKFSAST*VVPGMN
Trigger: GTTCATCCCTGGCACCACCAAAGTGGATGCACTGAA...CTTCATTACAGGTTGGCCGTTGTCCAATGTGTTGCTGTTATCTGGAACTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415514.5
ENST00000426513.6
CDS-3UTR CAA 90 bp GTGGAAACTGGTATGCCCACTTTGAGGAGGTTGTCTGACCGTTCCAGGGTCAAGTTTCAAGACCATGGTTaGCCTATTTCTCATCACTGG +
Preference number: 5 (lower is better)
Translates to: VETGMPTLRRLSDRSRVKFQDHG*PISHHW
Trigger: CCAGTGATGAGAAATAGGCAAACCATGGTCTTGAAA...CTTGACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGTTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CAA 90 bp CATCTTCTTCAGTGCATCCACTTTGGTGGTGCCAGGGATGAACCGATCCAAAACCTACCACAGGGCCTTTaGTGGCTTTTGAGTTTCATG +
Preference number: 5 (lower is better)
Translates to: HLLQCIHFGGARDEPIQNLPQGL*WLLSFM
Trigger: CATGAAACTCAAAAGCCACAAAAGGCCCTGTGGTAG...GTTTTGGATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415514.5
CDS TCA 90 bp AACAAATTAACACTTGCGCCTCCAAGCAGCTCCCACTTCCCAGTATaGATGTCACACACAGACTTGGGTTCAAAGAGCACATTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: NKLTLAPPSSSHFPV*MSHTDLGSKSTFLH
Trigger: GTGCAGGAATGTGCTCTTTGAACCCAAGTCTGTGTGTGACATTCATACTGGGAAGTGGGAGCTGCTTGGAGGCGCAAGTGTTAATTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000616707.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS CCA 90 bp GATCTAATGTGGACTCAAGTAACCCTCCTAGCTCACACACCTTTGTaGGGGCCCTATGCCATAACGTATATGAAAGTGCTTTGCATACGG +
Preference number: 5 (lower is better)
Translates to: DLMWTQVTLLAHTPL*GPYAITYMKVLCIR
Trigger: CCGTATGCAAAGCACTTTCATATACGTTATGGCATAGGGCCCCCACAAAGGTGTGTGAGCTAGGAGGGTTACTTGAGTCCACATTAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494436.1
CDS-3UTR CAA 90 bp ATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTCCCACTTTGAGGAGGTaGTCTGACCGTTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: IIKGSKAVSVHFRVKRGIPTLRR*SDRSRV
Trigger: GACCCTGGAACGGTCAGACAACCTCCTCAAAGTGGG...AATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp ATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 5 (lower is better)
Translates to: IKGSKAVSVHFRVKRGIATGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...TGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp CTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATGAGTGGCATGAATGCCAGAGGGTTTaGTTCCAGGTAGGCACTGAT +
Preference number: 5 (lower is better)
Translates to: LGRVRVTNVSMKSGDEWHECQRV*FQVGTD
Trigger: ATCAGTGCCTACCTGGAACAAAACCCTCTGGCATTC...ATGCCACTCATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CAA 90 bp GGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGGTGCGATAACAGCAACACATaGGACAACGGCCAACATAGT +
Preference number: 5 (lower is better)
Translates to: GSKAVSVHFRVKRGIAGCDNSNT*DNGQHS
Trigger: ACTATGTTGGCCGTTGTCCAATGTGTTGCTGTTATC...GCACCCTGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402310.5
CDS TCA 90 bp TATCTTTTTGGGTGCAGTTCAGCAACTGTCTTTATTGTGAGTGTCTaGCCAGGCTCCTACTTGGCCTTCTGGTCTACCTCTCTGTCTAAC +
Preference number: 5 (lower is better)
Translates to: YLFGCSSATVFIVSV*PGSYLAFWSTSLSN
Trigger: GTTAGACAGAGAGGTAGACCAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAGACAGTTGCTGAACTGCACCCAAAAAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS GCA 90 bp CCAGCCTCCTACCACAGGGCCCTCATACAAGTGACACATGCGAAGTaGCTAAAATGGATCAAGTGCTTAATGCTTGTTTATCCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: PASYHRALIQVTHAK*LKWIKCLMLVYPFS
Trigger: GGAAAAAGGATAAACAAGCATTAAGCACTTGATCCATTTTAGGCACTTCGCATGTGTCACTTGTATGAGGGCCCTGTGGTAGGAGGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS GCA 90 bp GATAAGGGCATCAGGATAATCCTGATCCAACAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCCAGGGATGAACCGATCCAAAACCTT +
Preference number: 5 (lower is better)
Translates to: DKGIRIILIQQHLLQ*IHFGGARDEPIQNL
Trigger: AAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAGAAGATGTTGTTGGATCAGGATTATCCTGATGCCCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430991.5
CDS-3UTR CAA 90 bp ACAAGAAGCCTAGGCAGGGTTAGAGTAACAAATGTGTCTATGAAGAGTGGGGATAACCGATCCAAAACCTaGTACCAGCCTCCTACCACA +
Preference number: 5 (lower is better)
Translates to: TRSLGRVRVTNVSMKSGDNRSKT*YQPPTT
Trigger: TGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTT...ATCCCCACTCTTCATAGACACATTTGTTACTCTAACCCTGCCTAGGCTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CAA 90 bp ACTATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCAACCGATCCAAAACCTaGTACCAGCCTCCTACCACA +
Preference number: 5 (lower is better)
Translates to: TIIKGSKAVSVHFRVKRGNRSKT*YQPPTT
Trigger: TGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTT...GCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp ATTATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 5 (lower is better)
Translates to: IIKGSKAVSVHFRVKRGITGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...AATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000405076.5
ENST00000405983.5
ENST00000426513.6
CDS-3UTR CAA 90 bp ATCAAGGGCTCTAAAGCAGTCAGTGTACATTTTAGAGTGAAGAGGGGCATTGCAGGCTGCCCTGTAGAATaGAGTAAAGCTTCTCTTCGA +
Preference number: 5 (lower is better)
Translates to: IKGSKAVSVHFRVKRGIAGCPVE*SKASLR
Trigger: TCGAAGAGAAGCTTTACTCAATTCTACAGGGCAGCC...TGCAATGCCCCTCTTCACTCTAAAATGTACACTGACTGCTTTAGAGCCCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS GCA 90 bp GACTCAAGTAACCCTCCTAGCTCACACACCTTTGTGGGGGCCCTATaGCATAACGTATATGAAAGTGCTTTGCATACGGTAAAATGTTTT +
Preference number: 5 (lower is better)
Translates to: DSSNPPSSHTFVGAL*HNVYESALHTVKCF
Trigger: AAAACATTTTACCGTATGCAAAGCACTTTCATATACGTTATGGCATAGGGCCCCCACAAAGGTGTGTGAGCTAGGAGGGTTACTTGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494436.1
CDS CCA 90 bp ACCTTCAAGCATTTGAACCACACATCTTCAGTGCCACTATCTTTTTaGGTGCAGTTCAGCAACTGTCTTTATTGTGAGTGTCTGACCAGG +
Preference number: 5 (lower is better)
Translates to: TFKHLNHTSSVPLSF*VQFSNCLYCECLTR
Trigger: CCTGGTCAGACACTCACAATAAAGACAGTTGCTGAACTGCACCCAAAAAGATAGTGGCACTGAAGATGTGTGGTTCAAATGCTTGAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS-3UTR CAA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTACTGGTATGCCCACTTaGAGGAGGTTGTCTGACCGT +
Preference number: 5 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFTGMPT*RRLSDR
Trigger: ACGGTCAGACAACCTCCTCAAAGTGGGCATACCAGT...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CAA 90 bp CTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTATGCACTGGGGTGTGTCCTaGCTTAGGAGGCAGTATCAT +
Preference number: 5 (lower is better)
Translates to: LGYGCKVDKVMKVQQIFMHWGVS*LRRQYH
Trigger: ATGATACTGCCTCCTAAGCAAGGACACACCCCAGTG...CATAAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CAA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTAACCGATCCAAAACCTaGTACCAGCCTCCTACCACA +
Preference number: 5 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFNRSKT*YQPPTT
Trigger: TGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTT...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CAA 90 bp CTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTATGGGGGATGAGTGGCATTaGCTGGGATATGGGTGTAAA +
Preference number: 5 (lower is better)
Translates to: LGYGCKVDKVMKVQQIFMGDEWH*LGYGCK
Trigger: TTTACACCCATATCCCAGCAAATGCCACTCATCCCC...CATAAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000426513.6
CDS-3UTR CAA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTCTGCTGTTGATAGACTaGGGTTTCCTCCAGGTCTAT +
Preference number: 5 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFLLLID*GFLQVY
Trigger: ATAGACCTGGAGGAAACCCAAGTCTATCAACAGCAG...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS-3UTR CAA 90 bp TTGCTGGGATATGGGTGTAAAGTTGATAAGGTCATGAAGGTTCAACAGATATTTTTGTGGTCTCTGCTGTaGATAGACTTGGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLGYGCKVDKVMKVQQIFLWSLL*IDLGFL
Trigger: GAGGAAACCCAAGTCTATCAACAGCAGAGACCACAA...AAATATCTGTTGAACCTTCATGACCTTATCAACTTTACACCCATATCCCAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS GCA 72 bp CGGCCAGGGCCCGCTGGTATGCCCGCCAGAGTGCCATaGTTCCTGTCAAGCCAAGAGGAGAGGGGGTCACCC +
Preference number: 6 (lower is better)
Translates to: RPGPAGMPARVP*FLSSQEERGSP
Trigger: GGGTGACCCCCTCTCCTCTTGGCTTGACAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000233545.6
CDS TCA 72 bp AGGGACCCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: RDPAVRTCTFHG*AARARWYARQS
Trigger: ACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGGTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000403262.6
ENST00000405076.5
ENST00000617583.4
ENST00000621183.4
CDS TCA 72 bp CCAGCTGCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: PAAAVRTCTFHG*AARARWYARQS
Trigger: ACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGCAGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402722.5
ENST00000426513.6
ENST00000621470.4
CDS TCA 72 bp GGATGGGCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: GWAAVRTCTFHG*AARARWYARQS
Trigger: ACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGCCCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405983.5
CDS TCA 72 bp AGGAGGCCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: RRPAVRTCTFHG*AARARWYARQS
Trigger: ACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGCCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428910.5
CDS TCA 72 bp CACTCACCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: HSPAVRTCTFHG*AARARWYARQS
Trigger: ACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGGTGAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494436.1
CDS GCA 72 bp CCAATGACAGGCTGGGCGTGGAGCCCAGCGAGCAGATaGTGGCGCAGGTGTGACATCATGCCCCTGGGTAGG +
Preference number: 6 (lower is better)
Translates to: PMTGWAWSPASR*WRRCDIMPLGR
Trigger: CCTACCCAGGGGCATGATGTCACACCTGCGCCAGCATCTGCTCGCTGGGCTCCACGCCCAGCCTGTCATTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486898.1
CDS CCA 72 bp ATGACAGGCTGGGCGTGGAGCCCAGCGAGCAGATGCTaGCGCAGGTGTGACATCATGCCCCTGGGTAGGTGC +
Preference number: 6 (lower is better)
Translates to: MTGWAWSPASRC*RRCDIMPLGRC
Trigger: GCACCTACCCAGGGGCATGATGTCACACCTGCGCCAGCATCTGCTCGCTGGGCTCCACGCCCAGCCTGTCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486898.1
CDS TCA 72 bp CAGAAGTCAGCTGTCAGGACCTGTACTTTCCACGGGTaGGCGGCCAGGGCCCGCTGGTATGCCCGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: QKSAVRTCTFHG*AARARWYARQS
Trigger: ACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTACAGGTCCTGACAGCTGACTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000399052.8
ENST00000415514.5
ENST00000486898.1
ENST00000622003.4
CDS GCA 72 bp TACTTTCCACGGGTGAGCGGCCAGGGCCCGCTGGTATaGCCGCCAGAGTGCCATGCTTCCTGTCAAGCCAAG +
Preference number: 6 (lower is better)
Translates to: YFPRVSGQGPLV*PPECHASCQAK
Trigger: CTTGGCTTGACAGGAAGCATGGCACTCTGGCGGGCATACCAGCGGGCCCTGGCCGCTCACCCGTGGAAAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000233545.6
CDS GCA 72 bp GACACCATGGTCAGAGTCCGGCCTCTCTGGTGTTCCTaGAGACCCCGCCTCTCCACCAGCTGCAGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: DTMVRVRPLWCS*RPRLSTSCSCQ
Trigger: CTGACAGCTGCAGCTGGTGGAGAGGCGGGGTCTGCAGGAACACCAGAGAGGCCGGACTCTGACCATGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402722.5
ENST00000426513.6
ENST00000621470.4
CDS CCA 72 bp GAGGAGCAGGAAGCGTGTCCTTCAGTCCAGGAGGCCTaGGTCGGCAGGTATAGCTACTGGCATGGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: EEQEACPSVQEA*VGRYSYWHGAS
Trigger: GCTGGCCCCATGCCAGTAGCTATACCTGCCGACCCAGGCCTCCTGGACTGAAGGACACGCTTCCTGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000399052.8
ENST00000415514.5
ENST00000486898.1
ENST00000622003.4
CDS GCA 72 bp TGTGACATCATGCCCCTGGGTAGGTGCCAGTTCTCATaGCGTCACTCCCGAACAGATCCAGCGGCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: CDIMPLGRCQFS*RHSRTDPAARG
Trigger: CCCCCTGGCCGCTGGATCTGTTCGGGAGTGACGGCATGAGAACTGGCACCTACCCAGGGGCATGATGTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486898.1
CDS GCA 72 bp CTCTGGTGTTCCTGCAGACCCCGCCTCTCCACCAGCTaGTGTGAGATAATGTCACCCAGGCCCATCAGGGAC +
Preference number: 6 (lower is better)
Translates to: LWCSCRPRLSTS*CEIMSPRPIRD
Trigger: GTCCCTGATGGGCCTGGGTGACATTATCTCACAGCAGCTGGTGGAGAGGCGGGGTCTGCAGGAACACCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000403262.6
ENST00000405076.5
ENST00000405983.5
ENST00000428910.5
ENST00000430991.5
ENST00000616446.1
ENST00000616707.1
ENST00000617583.4
ENST00000621183.4
ENST00000622003.4
CDS CCA 72 bp CGAGCAGATGCTGGCGCAGGTGTGACATCATGCCCCTaGGTAGGTGCCAGTTCTCATGCCGTCACTCCCGAA +
Preference number: 6 (lower is better)
Translates to: RADAGAGVTSCP*VGASSHAVTPE
Trigger: TTCGGGAGTGACGGCATGAGAACTGGCACCTACCCAGGGGCATGATGTCACACCTGCGCCAGCATCTGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486898.1
CDS TCA 72 bp ACAGATCCAGCGGCCAGGGGGAAGGGAGCCTGCCTCTaGGCAGATCAATTTGGGACCACTTCCTGCCCACTA +
Preference number: 6 (lower is better)
Translates to: TDPAARGKGACL*ADQFGTTSCPL
Trigger: TAGTGGGCAGGAAGTGGTCCCAAATTGATCTGCTCAGAGGCAGGCTCCCTTCCCCCTGGCCGCTGGATCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486898.1
CDS GCA 72 bp CAGGGCCCTGGAAGTAAACCCCAGATAGCAGCAGGCTaGAGTGAGGGAGCCCTAGGCCTCTACCTCACTAAG +
Preference number: 6 (lower is better)
Translates to: QGPGSKPQIAAG*SEGALGLYLTK
Trigger: CTTAGTGAGGTAGAGGCCTAGGGCTCCCTCACTGCAGCCTGCTGCTATCTGGGGTTTACTTCCAGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475085.1
ENST00000616707.1
CDS GCA 72 bp TGCTGGCGCAGGTGTGACATCATGCCCCTGGGTAGGTaGCAGTTCTCATGCCGTCACTCCCGAACAGATCCA +
Preference number: 6 (lower is better)
Translates to: CWRRCDIMPLGR*QFSCRHSRTDP
Trigger: TGGATCTGTTCGGGAGTGACGGCATGAGAACTGGCACCTACCCAGGGGCATGATGTCACACCTGCGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486898.1
CDS CAA 72 bp ACACCTGCCCAGCTCACCCGCTGTAGTTTGGCCCAGTaGTCCTGGGCTGACAGTCCATTAAGTGCCCCTACC +
Preference number: 6 (lower is better)
Translates to: TPAQLTRCSLAQ*SWADSPLSAPT
Trigger: GGTAGGGGCACTTAATGGACTGTCAGCCCAGGACAACTGGGCCAAACTACAGCGGGTGAGCTGGGCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000616446.1
ENST00000616707.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS CAA 90 bp ATGTCACCCAGGCCCATCAGGGACCCTATGCAGGGTACACAGGTGTaGTCAGGACATCTCCTGGGATGGGCTGCCATTCCAAGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: MSPRPIRDPMQGTQV*SGHLLGWAAIPRRE
Trigger: CTCCCTCCTTGGAATGGCAGCCCATCCCAGGAGATGTCCTGACAACACCTGTGTACCCTGCATAGGGTCCCTGATGGGCCTGGGTGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CAA 90 bp AGTGCATCCACTTTGGTGGTGCCAGGGATGAACCGATCCAAAACCTaGTACCAGCCTCCTACCACAGGGCCCACAAAGCCACAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SASTLVVPGMNRSKT*YQPPTTGPTKPQPR
Trigger: CCTGGGCTGTGGCTTTGTGGGCCCTGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000403262.6
ENST00000405983.5
ENST00000426513.6
ENST00000428910.5
ENST00000430991.5
ENST00000616446.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS CAA 90 bp ATGTCACCCAGGCCCATCAGGGACCCTATGCAGGGTACACAGGTGTaGTCAGGACATCTCCTGGGATGGGCAGCTGTCAGGACCTGTACT +
Preference number: 6 (lower is better)
Translates to: MSPRPIRDPMQGTQV*SGHLLGWAAVRTCT
Trigger: AGTACAGGTCCTGACAGCTGCCCATCCCAGGAGATGTCCTGACAACACCTGTGTACCCTGCATAGGGTCCCTGATGGGCCTGGGTGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405983.5
CDS CAA 90 bp ACATTCTCCACACCTGCCCAGCTCACCCGCTGTAGTTTGGCCCAGTaGTCCTGGGCTGACAGTCCATTAAGTGCCCCTACCAGTGGGAGA +
Preference number: 6 (lower is better)
Translates to: TFSTPAQLTRCSLAQ*SWADSPLSAPTSGR
Trigger: TCTCCCACTGGTAGGGGCACTTAATGGACTGTCAGCCCAGGACAACTGGGCCAAACTACAGCGGGTGAGCTGGGCAGGTGTGGAGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000616446.1
ENST00000616707.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS GCA 72 bp GTGCAGTGGGGCAAGCCTCTGGCTTCCAAATCAGTCTaGCCTGGTCCCACTCAAGTCCTAGAGGGACACTCA +
Preference number: 6 (lower is better)
Translates to: VQWGKPLASKSV*PGPTQVLEGHS
Trigger: TGAGTGTCCCTCTAGGACTTGAGTGGGACCAGGGCAGACTGATTTGGAAGCCAGAGGCTTGCCCCACTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494436.1
CDS CCA 72 bp CAGGGTACACAGGTGTTGTCAGGACATCTCCTGGGATaGGCTGCCATTCCAAGGAGGGAGGGACATCTGCTG +
Preference number: 6 (lower is better)
Translates to: QGTQVLSGHLLG*AAIPRREGHLL
Trigger: CAGCAGATGTCCCTCCCTCCTTGGAATGGCAGCCCATCCCAGGAGATGTCCTGACAACACCTGTGTACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS GCA 72 bp TACACAGGTGTTGTCAGGACATCTCCTGGGATGGGCTaGCATTCCAAGGAGGGAGGGACATCTGCTGACCTC +
Preference number: 6 (lower is better)
Translates to: YTGVVRTSPGMG*HSKEGGTSADL
Trigger: GAGGTCAGCAGATGTCCCTCCCTCCTTGGAATGGCAGCCCATCCCAGGAGATGTCCTGACAACACCTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CCA 72 bp CTATGCAGGGTACACAGGTGTTGTCAGGACATCTCCTaGGATGGGCTGCCATTCCAAGGAGGGAGGGACATC +
Preference number: 6 (lower is better)
Translates to: LCRVHRCCQDIS*DGLPFQGGRDI
Trigger: GATGTCCCTCCCTCCTTGGAATGGCAGCCCATCCCAGGAGATGTCCTGACAACACCTGTGTACCCTGCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CAA 72 bp ATTGGACAACGGCCAACCCGCTGTAGTTTGGCCCAGTaGTCCTGGGCTGACAGTCCATTAAGTGCCCCTACC +
Preference number: 6 (lower is better)
Translates to: IGQRPTRCSLAQ*SWADSPLSAPT
Trigger: GGTAGGGGCACTTAATGGACTGTCAGCCCAGGACAACTGGGCCAAACTACAGCGGGTTGGCCGTTGTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402722.5
CDS CCA 72 bp GTCCCTCCAGATATGCCATCAAAGACGGAGCTCAGGTaGGATGGAGACAAGGGTGGTAGAAGCAGGATCCTC +
Preference number: 6 (lower is better)
Translates to: VPPDMPSKTELR*DGDKGGRSRIL
Trigger: GAGGATCCTGCTTCTACCACCCTTGTCTCCATCCCACCTGAGCTCCGTCTTTGATGGCATATCTGGAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000403262.6
ENST00000616707.1
CDS CAA 72 bp ACTTTGGTGGTGCCAGGGATGAACCGATCCAAAACCTaGTACCAGCCTCCTACCACAGGGCCCACAAAGCCA +
Preference number: 6 (lower is better)
Translates to: TLVVPGMNRSKT*YQPPTTGPTKP
Trigger: TGGCTTTGTGGGCCCTGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000233545.6
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000403262.6
ENST00000405983.5
ENST00000426513.6
ENST00000428910.5
ENST00000430991.5
ENST00000616446.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS CAA 72 bp ACATTCTCCACACCTGCCCAGCTCACCCGCTGTAGTTaGGCCCAGTTGTCCTGGGCTGACAGTCCATTAAGT +
Preference number: 6 (lower is better)
Translates to: TFSTPAQLTRCS*AQLSWADSPLS
Trigger: ACTTAATGGACTGTCAGCCCAGGACAACTGGGCCAAACTACAGCGGGTGAGCTGGGCAGGTGTGGAGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000616446.1
ENST00000616707.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS TCA 72 bp GAACTAAGACCACTGTTGAGTCCACTGAAGCCCTGTTaGGGGGAGAACTTACCACAAAGCCACAGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: ELRPLLSPLKPC*GENLPQSHSPG
Trigger: CCCTGGGCTGTGGCTTTGTGGTAAGTTCTCCCCTCAACAGGGCTTCAGTGGACTCAACAGTGGTCTTAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS TCA 72 bp ACAAGGGTGGTAGAAGCAGGATCCTCCCTAGGGAGATaGAGAAGGTCAGTGGGCAGACACTCTGGGACAGTT +
Preference number: 6 (lower is better)
Translates to: TRVVEAGSSLGR*RRSVGRHSGTV
Trigger: AACTGTCCCAGAGTGTCTGCCCACTGACCTTCTTCATCTCCCTAGGGAGGATCCTGCTTCTACCACCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CAA 72 bp ACTTTGGTGGTGCCAGGGATGAACCGATCCAAAACCTaGTACCAGCCTCCTACCACAGGGCCCTCATACAAG +
Preference number: 6 (lower is better)
Translates to: TLVVPGMNRSKT*YQPPTTGPSYK
Trigger: CTTGTATGAGGGCCCTGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS CAA 72 bp ACTTTGGTGGTGCCAGGGATGAACCGATCCAAAACCTaGTACCAGCCTCCTACCACAGGGCCTTTTGTGGCT +
Preference number: 6 (lower is better)
Translates to: TLVVPGMNRSKT*YQPPTTGPFVA
Trigger: AGCCACAAAAGGCCCTGTGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415514.5
CDS GCA 72 bp CAGACTCACTGTCTTGCCTGGCCCTACCCCAACTTCTaGACACAAGAAAAAGGTGAACAGTTGGGTGATGGC +
Preference number: 6 (lower is better)
Translates to: QTHCLAWPYPNF*TQEKGEQLGDG
Trigger: GCCATCACCCAACTGTTCACCTTTTTCTTGTGTGCAGAAGTTGGGGTAGGGCCAGGCAAGACAGTGAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616707.1
ENST00000617583.4
CDS CAA 90 bp GCCTGGCCCTACCCCAACTTCTGCACACAAGAAAAAGGTGAACAGTaGGGTGATGGCTTCCCTATTTATGGTGCCCATCCTGGGAATGAA +
Preference number: 6 (lower is better)
Translates to: AWPYPNFCTQEKGEQ*GDGFPIYGAHPGNE
Trigger: TTCATTCCCAGGATGGGCACCATAAATAGGGAAGCCATCACCCAACTGTTCACCTTTTTCTTGTGTGCAGAAGTTGGGGTAGGGCCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000616707.1
ENST00000617583.4
CDS TCA 72 bp TCTTCTTCAGTGCATCCACTTTGGTGGTGCCAGGGATaGACCGATCCAAAACCTTGTACCAGCCTCCTACCA +
Preference number: 6 (lower is better)
Translates to: SSSVHPLWWCQG*TDPKPCTSLLP
Trigger: TGGTAGGAGGCTGGTACAAGGTTTTGGATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000233545.6
ENST00000357186.10
ENST00000380044.6
ENST00000402310.5
ENST00000402722.5
ENST00000403262.6
ENST00000405983.5
ENST00000415514.5
ENST00000426513.6
ENST00000428910.5
ENST00000430991.5
ENST00000475085.1
ENST00000616446.1
ENST00000616707.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS TCA 72 bp GACCACCCTCCAAAACAGACTGGGGACAGTGTAGGATaGAAGACAGCCAACCCTTCAAGAGAGCCGAATAGA +
Preference number: 6 (lower is better)
Translates to: DHPPKQTGDSVG*KTANPSREPNR
Trigger: TCTATTCGGCTCTCTTGAAGGGTTGGCTGTCTTTCATCCTACACTGTCCCCAGTCTGTTTTGGAGGGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494436.1
CDS TCA 72 bp ACACTTGCGCCTCCAAGCAGCTCCCACTTCCCAGTATaGATGTCACACACAGACTTGGGTTCAAAGAGCACA +
Preference number: 6 (lower is better)
Translates to: TLAPPSSSHFPV*MSHTDLGSKST
Trigger: TGTGCTCTTTGAACCCAAGTCTGTGTGTGACATTCATACTGGGAAGTGGGAGCTGCTTGGAGGCGCAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000616707.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS GCA 72 bp AAAAGAACAAGGTCAAGACTAGGGCTGAGACTCAGTTaGAGAAGCAGGGCTGCCAGCACCAATCTACAGCCT +
Preference number: 6 (lower is better)
Translates to: KRTRSRLGLRLS*RSRAASTNLQP
Trigger: AGGCTGTAGATTGGTGCTGGCAGCCCTGCTTCTGCAACTGAGTCTCAGCCCTAGTCTTGACCTTGTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS GCA 72 bp TCTCCTGCTCACCTGATCCAACAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCCAGGGATGAACCGATC +
Preference number: 6 (lower is better)
Translates to: SPAHLIQQHLLQ*IHFGGARDEPI
Trigger: GATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAGAAGATGTTGTTGGATCAGGTGAGCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CCA 72 bp GCTCCCACTTCCCAGTATGAATGTCACACACAGACTTaGGTTCAAAGAGCACATTCCTGCACCATAACCCTC +
Preference number: 6 (lower is better)
Translates to: APTSQYECHTQT*VQRAHSCTITL
Trigger: GAGGGTTATGGTGCAGGAATGTGCTCTTTGAACCCAAGTCTGTGTGTGACATTCATACTGGGAAGTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000616707.1
ENST00000617583.4
ENST00000621183.4
ENST00000621470.4
ENST00000622003.4
CDS CCA 72 bp GTCAGTGGGCAGACACTCTGGGACAGTTTCCGGAAATaGCAAGACATTCTGAATAACACGCTTGGGAATCTG +
Preference number: 6 (lower is better)
Translates to: VSGQTLWDSFRK*QDILNNTLGNL
Trigger: CAGATTCCCAAGCGTGTTATTCAGAATGTCTTGCCATTTCCGGAAACTGTCCCAGAGTGTCTGCCCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS TCA 72 bp CCCAATAGGGTAGTGCAACACTTGGCTTCTTTGCACTaGCATGGGTTGTGGTCTCTGCTGTTGATAGACTTG +
Preference number: 6 (lower is better)
Translates to: PNRVVQHLASLH*HGLWSLLLIDL
Trigger: CAAGTCTATCAACAGCAGAGACCACAACCCATGTCAGTGCAAAGAAGCCAAGTGTTGCACTACCCTATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS CCA 72 bp CCCCCAAATTCCATCATTCTGCTCCTTGTCACCTCGTaGGGATGGCAGACAGCAATATTCTTTTGTGGCTTT +
Preference number: 6 (lower is better)
Translates to: PPNSIILLLVTS*GWQTAIFFCGF
Trigger: AAAGCCACAAAAGAATATTGCTGTCTGCCATCCCCACGAGGTGACAAGGAGCAGAATGATGGAATTTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399052.8
CDS CAA 72 bp ATGTGGACTCAAGTAACCCTCCTAGCTCACACACCTTaGTGGGGGCCCTATGCCATAACGTATATGAAAGTG +
Preference number: 6 (lower is better)
Translates to: MWTQVTLLAHTP*WGPYAITYMKV
Trigger: CACTTTCATATACGTTATGGCATAGGGCCCCCACAAAGGTGTGTGAGCTAGGAGGGTTACTTGAGTCCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494436.1
CDS TCA 72 bp GAGAAAACTGGGAAGCTCTTTGGTGAAGGTGGAATTTaGGCCGGGACCTTGAAGGATGAATTGAACTCAGGT +
Preference number: 6 (lower is better)
Translates to: EKTGKLFGEGGI*AGTLKDELNSG
Trigger: ACCTGAGTTCAATTCATCCTTCAAGGTCCCGGCTCAAATTCCACCTTCACCAAAGAGCTTCCCAGTTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS TCA 72 bp ATCTTTTTGGGTGCAGTTCAGCAACTGTCTTTATTGTaGGTGTCTGACCAGGCTCCTACTTGGCCTTCTGGT +
Preference number: 6 (lower is better)
Translates to: IFLGAVQQLSLL*VSDQAPTWPSG
Trigger: ACCAGAAGGCCAAGTAGGAGCCTGGTCAGACACTCACAATAAAGACAGTTGCTGAACTGCACCCAAAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS TCA 72 bp TTCCCCTGTTCCCACGATCCTTCACCTTCAAGCATTTaGACCACACATCTTCAGTGCCACTATCTTTTTGGG +
Preference number: 6 (lower is better)
Translates to: FPCSHDPSPSSI*TTHLQCHYLFG
Trigger: CCCAAAAAGATAGTGGCACTGAAGATGTGTGGTTCAAATGCTTGAAGGTGAAGGATCGTGGGAACAGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS GCA 72 bp ATCAGGATAATCCTGATCCAACAACATCTTCTTCAGTaGATCCACTTTGGTGGTGCCAGGGATGAACCGATC +
Preference number: 6 (lower is better)
Translates to: IRIILIQQHLLQ*IHFGGARDEPI
Trigger: GATCGGTTCATCCCTGGCACCACCAAAGTGGATGCACTGAAGAAGATGTTGTTGGATCAGGATTATCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430991.5
CDS CCA 72 bp AAACCCCAGCCTATACTCCTAGGCATTTCAAGACCATaGTTTGCCTATTTCTCATCACTGGGGTGTGTCCTT +
Preference number: 6 (lower is better)
Translates to: KPQPILLGISRP*FAYFSSLGCVL
Trigger: AAGGACACACCCCAGTGATGAGAAATAGGCAAACCATGGTCTTGAAATGCCTAGGAGTATAGGCTGGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS CAA 90 bp TGTGATCTAATGTGGACTCAAGTAACCCTCCTAGCTCACACACCTTaGTGGGGGCCCTATGCCATAACGTATATGAAAGTGCTTTGCATA +
Preference number: 6 (lower is better)
Translates to: CDLMWTQVTLLAHTP*WGPYAITYMKVLCI
Trigger: TATGCAAAGCACTTTCATATACGTTATGGCATAGGGCCCCCACAAAGGTGTGTGAGCTAGGAGGGTTACTTGAGTCCACATTAGATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494436.1
CDS CCA 72 bp GCATTTCAAGACCATGGTTTGCCTATTTCTCATCACTaGGGTGTGTCCTTGCTTAGGAGGCAGTATCATAGT +
Preference number: 6 (lower is better)
Translates to: AFQDHGLPISHH*GVSLLRRQYHS
Trigger: ACTATGATACTGCCTCCTAAGCAAGGACACACCCCAGTGATGAGAAATAGGCAAACCATGGTCTTGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS CAA 72 bp TTTCCCCTGTTCCCACGATCCTTCACCTTCAAGCATTaGAACCACACATCTTCAGTGCCACTATCTTTTTGG +
Preference number: 6 (lower is better)
Translates to: FPLFPRSFTFKH*NHTSSVPLSFW
Trigger: CCAAAAAGATAGTGGCACTGAAGATGTGTGGTTCAAATGCTTGAAGGTGAAGGATCGTGGGAACAGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS GCA 72 bp TACCACAGGGCCCTCATACAAGTGACACATGCGAAGTaGCTAAAATGGATCAAGTGCTTAATGCTTGTTTAT +
Preference number: 6 (lower is better)
Translates to: YHRALIQVTHAK*LKWIKCLMLVY
Trigger: ATAAACAAGCATTAAGCACTTGATCCATTTTAGGCACTTCGCATGTGTCACTTGTATGAGGGCCCTGTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS CCA 72 bp GCCCTCATACAAGTGACACATGCGAAGTGCCTAAAATaGATCAAGTGCTTAATGCTTGTTTATCCTTTTTCC +
Preference number: 6 (lower is better)
Translates to: ALIQVTHAKCLK*IKCLMLVYPFS
Trigger: GGAAAAAGGATAAACAAGCATTAAGCACTTGATCCATTTTAGGCACTTCGCATGTGTCACTTGTATGAGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357186.10
CDS CCA 72 bp CATTTGAACCACACATCTTCAGTGCCACTATCTTTTTaGGTGCAGTTCAGCAACTGTCTTTATTGTGAGTGT +
Preference number: 6 (lower is better)
Translates to: HLNHTSSVPLSF*VQFSNCLYCEC
Trigger: ACACTCACAATAAAGACAGTTGCTGAACTGCACCCAAAAAGATAGTGGCACTGAAGATGTGTGGTTCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616707.1
CDS CAA 72 bp TCTGTATTCGTTTTAGCTATGCTACTCATGTACATTTaGGCCCTGTTCCCTCTGAAGCGTTCCATATTTTCC +
Preference number: 6 (lower is better)
Translates to: SVFVLAMLLMYI*ALFPLKRSIFS
Trigger: GGAAAATATGGAACGCTTCAGAGGGAACAGGGCCAAAATGTACATGAGTAGCATAGCTAAAACGAATACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616707.1