RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPRIP (Homo sapiens)

Ensembl gene IDs: ENSG00000133030

Ensembl transcript IDs: ENST00000313485.10, ENST00000341712.8, ENST00000395806.5, ENST00000395807.2, ENST00000395811.9, ENST00000414263.5, ENST00000466186.2, ENST00000578209.5, ENST00000578521.1, ENST00000578548.1, ENST00000581955.1, ENST00000584067.5, ENST00000584936.2, ENST00000651222.2

Found 1185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGCTGTGTGTGTGGCTGCGCCTCCGAAACACCCTTTCCTCAGGTaGCCGAGCTGCGCCTGGGGAAGGCCCCCACTGAGGCTGTGCCCG +
Preference number: 1 (lower is better)
Translates to: SAVCVAAPPKHPFLR*PSCAWGRPPLRLCP
Trigger: CGGGCACAGCCTCAGTGGGGGCCTTCCCCAGGCGCAGCTCGGCCACCTGAGGAAAGGGTGTTTCGGAGGCGCAGCCACACACACAGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp GCTGCGCCTCCGAAACACCCTTTCCTCAGGTGGCCGAGCTGCGCCTaGGGAAGGCCCCCACTGAGGCTGTGCCCGAGGAACATGCCGTGT +
Preference number: 1 (lower is better)
Translates to: AAPPKHPFLRWPSCA*GRPPLRLCPRNMPC
Trigger: ACACGGCATGTTCCTCGGGCACAGCCTCAGTGGGGGCCTTCCCCAGGCGCAGCTCGGCCACCTGAGGAAAGGGTGTTTCGGAGGCGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp TGTGTGGCTGCGCCTCCGAAACACCCTTTCCTCAGGTGGCCGAGCTaGGCCTGGGGAAGGCCCCCACTGAGGCTGTGCCCGAGGAACATG +
Preference number: 1 (lower is better)
Translates to: CVAAPPKHPFLRWPS*AWGRPPLRLCPRNM
Trigger: CATGTTCCTCGGGCACAGCCTCAGTGGGGGCCTTCCCCAGGCGCAGCTCGGCCACCTGAGGAAAGGGTGTTTCGGAGGCGCAGCCACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp CAGGGAGTGATGGGCGTGACCGTGAGGCTGCCAGCGCTGTGTGTGTaGCTGCGCCTCCGAAACACCCTTTCCTCAGGTGGCCGAGCTGCG +
Preference number: 1 (lower is better)
Translates to: QGVMGVTVRLPALCV*LRLRNTLSSGGRAA
Trigger: CGCAGCTCGGCCACCTGAGGAAAGGGTGTTTCGGAGGCGCAGCCACACACACAGCGCTGGCAGCCTCACGGTCACGCCCATCACTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp GGCTTCCAGCTCAGAGGGCAGCGCACTGTCTCCACCCCTGCCCAATaGTCCACTCAGACCCGGGAGGCTGTGGACAGCGCGTCCTCTGAA +
Preference number: 1 (lower is better)
Translates to: GFQLRGQRTVSTPAQ*STQTREAVDSASSE
Trigger: TTCAGAGGACGCGCTGTCCACAGCCTCCCGGGTCTGAGTGGATCATTGGGCAGGGGTGGAGACAGTGCGCTGCCCTCTGAGCTGGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp AAGCACAGGCTTCCAGCTCAGAGGGCAGCGCACTGTCTCCACCCCTaGCCAATGATCCACTCAGACCCGGGAGGCTGTGGACAGCGCGTC +
Preference number: 1 (lower is better)
Translates to: KHRLPAQRAAHCLHP*PMIHSDPGGCGQRV
Trigger: GACGCGCTGTCCACAGCCTCCCGGGTCTGAGTGGATCATTGGGCAGGGGTGGAGACAGTGCGCTGCCCTCTGAGCTGGAAGCCTGTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp CAGCAGCCGTCAAGCAGGCAGCAGCCCTGGGCTTGTGCACACGGCTaGATGTCAGATGCGTCCGTCCAGGCACTCCTGGCTGCAGTCATG +
Preference number: 1 (lower is better)
Translates to: QQPSSRQQPWACAHG*MSDASVQALLAAVM
Trigger: CATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGTGTGCACAAGCCCAGGGCTGCTGCCTGCTTGACGGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR CCA 90 bp GAGAGAGGGCCCAGCCCTGTGCAGCACAAGGCTCCCTGCTCAGTGTaGCACCAGTTGGGCAGCCGTCAACATCTGTGCCAGTGTTGCCAC +
Preference number: 1 (lower is better)
Translates to: ERGPSPVQHKAPCSV*HQLGSRQHLCQCCH
Trigger: GTGGCAACACTGGCACAGATGTTGACGGCTGCCCAACTGGTGCCACACTGAGCAGGGAGCCTTGTGCTGCACAGGGCTGGGCCCTCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp CTGTCTCCACCCCTGCCCAATGATCCACTCAGACCCGGGAGGCTGTaGACAGCGCGTCCTCTGAAATGCTGGTCTCCACACCTGCCTGGG +
Preference number: 1 (lower is better)
Translates to: LSPPLPNDPLRPGRL*TARPLKCWSPHLPG
Trigger: CCCAGGCAGGTGTGGAGACCAGCATTTCAGAGGACGCGCTGTCCACAGCCTCCCGGGTCTGAGTGGATCATTGGGCAGGGGTGGAGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp AGGAAACTGGAGAGAGGGCCCAGCCCTGTGCAGCACAAGGCTCCCTaGTCAGTGTGGCACCAGTTGGGCAGCCGTCAACATCTGTGCCAG +
Preference number: 1 (lower is better)
Translates to: RKLERGPSPVQHKAP*SVWHQLGSRQHLCQ
Trigger: CTGGCACAGATGTTGACGGCTGCCCAACTGGTGCCACACTGAGCAGGGAGCCTTGTGCTGCACAGGGCTGGGCCCTCTCTCCAGTTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp AAGCAGGCAGCAGCCCTGGGCTTGTGCACACGGCTGGATGTCAGATaGGTCCGTCCAGGCACTCCTGGCTGCAGTCATGGTCTCAGCTGT +
Preference number: 1 (lower is better)
Translates to: KQAAALGLCTRLDVR*VRPGTPGCSHGLSC
Trigger: ACAGCTGAGACCATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGTGTGCACAAGCCCAGGGCTGCTGCCTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR CCA 90 bp CCAGCCCTGTGCAGCACAAGGCTCCCTGCTCAGTGTGGCACCAGTTaGGCAGCCGTCAACATCTGTGCCAGTGTTGCCACCTGGGCAAGT +
Preference number: 1 (lower is better)
Translates to: PALCSTRLPAQCGTS*AAVNICASVATWAS
Trigger: ACTTGCCCAGGTGGCAACACTGGCACAGATGTTGACGGCTGCCCAACTGGTGCCACACTGAGCAGGGAGCCTTGTGCTGCACAGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp CCGTCCAGGCACTCCTGGCTGCAGTCATGGTCTCAGCTGTGGAGATaGCCTTATTCTCCTGGGTGCTGCCATGTCGAGGGCCCTACAGCT +
Preference number: 1 (lower is better)
Translates to: PSRHSWLQSWSQLWR*PYSPGCCHVEGPTA
Trigger: AGCTGTAGGGCCCTCGACATGGCAGCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTGCCTGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR CCA 90 bp TCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACCTGTaGCAGGGAGGAATGCAGACGCCCTGCTGGCCTGTCTCTGACCCC +
Preference number: 1 (lower is better)
Translates to: SWQYPTLNQPLGRDL*QGGMQTPCWPVSDP
Trigger: GGGGTCAGAGACAGGCCAGCAGGGCGTCTGCATTCCTCCCTGCCACAGGTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp GCCCCCACTGAGGCTGTGCCCGAGGAACATGCCGTGTCCACCCCTTaGGACTTGGACGTCCTCTCAGGCCATCCTACATTACTGGAGTCT +
Preference number: 1 (lower is better)
Translates to: APTEAVPEEHAVSTP*DLDVLSGHPTLLES
Trigger: AGACTCCAGTAATGTAGGATGGCCTGAGAGGACGTCCAAGTCCCAAGGGGTGGACACGGCATGTTCCTCGGGCACAGCCTCAGTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp ATGCGTCCGTCCAGGCACTCCTGGCTGCAGTCATGGTCTCAGCTGTaGAGATGCCCTTATTCTCCTGGGTGCTGCCATGTCGAGGGCCCT +
Preference number: 1 (lower is better)
Translates to: MRPSRHSWLQSWSQL*RCPYSPGCCHVEGP
Trigger: AGGGCCCTCGACATGGCAGCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTGCCTGGACGGACGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR TCA 90 bp GCCCTGGGATGTCCACTGCATCACCCACTTAGCACAGGCCCATTATaGCTCCCTGAAGCACAGGCTTCCAGCTCAGAGGGCAGCGCACTG +
Preference number: 1 (lower is better)
Translates to: ALGCPLHHPLSTGPL*LPEAQASSSEGSAL
Trigger: CAGTGCGCTGCCCTCTGAGCTGGAAGCCTGTGCTTCAGGGAGTCATAATGGGCCTGTGCTAAGTGGGTGATGCAGTGGACATCCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp GAGTATATCAGCGGCTCTTCAAACTGTGAAGATCCCTGGAGGTCATaGTTCAGGGGCCACCTCGGGTGTAGGATGGGGCAGCGGGTGGGG +
Preference number: 1 (lower is better)
Translates to: EYISGSSNCEDPWRS*FRGHLGCRMGQRVG
Trigger: CCCCACCCGCTGCCCCATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTCACAGTTTGAAGAGCCGCTGATATACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395806.5
3UTR GCA 90 bp TGCACACGGCTGGATGTCAGATGCGTCCGTCCAGGCACTCCTGGCTaGAGTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTGGGT +
Preference number: 1 (lower is better)
Translates to: CTRLDVRCVRPGTPG*SHGLSCGDALILLG
Trigger: ACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR TCA 90 bp GATCCTGATGCACTCCAGGTCCCTGTCTGTCCTGGAGCATTCGTGTaGCCCAGCAGTGTCCTGGAGACAACAATGAGGCTGTGGGGGACA +
Preference number: 1 (lower is better)
Translates to: DPDALQVPVCPGAFV*PSSVLETTMRLWGT
Trigger: TGTCCCCCACAGCCTCATTGTTGTCTCCAGGACACTGCTGGGTCACACGAATGCTCCAGGACAGACAGGGACCTGGAGTGCATCAGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp CAGGGAACCCAGACTTCCTTGACCCAGATGGTGGCTGTCCCTGTATaGGGGCTCTTCAGAAACGCCAGGACAGGCCCAGGGCATTTTCAG +
Preference number: 1 (lower is better)
Translates to: QGTQTSLTQMVAVPV*GLFRNARTGPGHFQ
Trigger: CTGAAAATGCCCTGGGCCTGTCCTGGCGTTTCTGAAGAGCCCTCATACAGGGACAGCCACCATCTGGGTCAAGGAAGTCTGGGTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp GGAGACGCTCGCGCTGAGCGGGCTAGGAACCTCTCTAGAGAAGAATaGTGGAGGGCAGGAAAGCCCAGGAAGGTGAAAGGTGCGAAAACA +
Preference number: 1 (lower is better)
Translates to: GDARAERARNLSREE*WRAGKPRKVKGAKT
Trigger: TGTTTTCGCACCTTTCACCTTCCTGGGCTTTCCTGCCCTCCAGCATTCTTCTCTAGAGAGGTTCCTAGCCCGCTCAGCGCGAGCGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp TATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTaGTATTACCTACTGGAGACGCTCGCGCTGAGCGGGCTAGGAACC +
Preference number: 1 (lower is better)
Translates to: YGTSKPEVRGKPTFS*YYLLETLALSGLGT
Trigger: GGTTCCTAGCCCGCTCAGCGCGAGCGTCTCCAGTAGGTAATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp GACGCTCGCGCTGAGCGGGCTAGGAACCTCTCTAGAGAAGAATGCTaGAGGGCAGGAAAGCCCAGGAAGGTGAAAGGTGCGAAAACAGTG +
Preference number: 1 (lower is better)
Translates to: DARAERARNLSREEC*RAGKPRKVKGAKTV
Trigger: CACTGTTTTCGCACCTTTCACCTTCCTGGGCTTTCCTGCCCTCCAGCATTCTTCTCTAGAGAGGTTCCTAGCCCGCTCAGCGCGAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp CTGAGGCTGTGCCCGAGGAACATGCCGTGTCCACCCCTTGGGACTTaGACGTCCTCTCAGGCCATCCTACATTACTGGAGTCTCCAATTC +
Preference number: 1 (lower is better)
Translates to: LRLCPRNMPCPPLGT*TSSQAILHYWSLQF
Trigger: GAATTGGAGACTCCAGTAATGTAGGATGGCCTGAGAGGACGTCCAAGTCCCAAGGGGTGGACACGGCATGTTCCTCGGGCACAGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp CTTGTGCACACGGCTGGATGTCAGATGCGTCCGTCCAGGCACTCCTaGCTGCAGTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCT +
Preference number: 1 (lower is better)
Translates to: LVHTAGCQMRPSRHS*LQSWSQLWRCPYSP
Trigger: AGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGTGTGCACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR GCA 90 bp GAAGAGCCCCCTCTAAGGGGTGGCTGCAGAACAACCTGCCGTAGCTaGTGTGCAAGGAAGAACGGCCATCTCAGAACGTTCTGTTGCTTG +
Preference number: 1 (lower is better)
Translates to: EEPPLRGGCRTTCRS*CARKNGHLRTFCCL
Trigger: CAAGCAACAGAACGTTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCACCCCTTAGAGGGGGCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp GGGCTGATCCCAGCTTGCAGGGAAGGGGAAACGAAACGTTGTCTCTaGCCTGTGTCACCTCTTAGTGCTCCAACAGGGACCTTAGGGCAA +
Preference number: 1 (lower is better)
Translates to: GLIPACREGETKRCL*PVSPLSAPTGTLGQ
Trigger: TTGCCCTAAGGTCCCTGTTGGAGCACTAAGAGGTGACACAGGCCAGAGACAACGTTTCGTTTCCCCTTCCCTGCAAGCTGGGATCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp GGTTCTTGCTGGGCCTTCCAACTCACTAAGCAGGCTGTGGGGCCTTaGTCTCCATGCTCTTCTGCCTTCATACTTGCTGAATCCGAAGGC +
Preference number: 1 (lower is better)
Translates to: GSCWAFQLTKQAVGP*SPCSSAFILAESEG
Trigger: GCCTTCGGATTCAGCAAGTATGAAGGCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTGCTTAGTGAGTTGGAAGGCCCAGCAAGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp CTGGCTGCAGTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTaGGTGCTGCCATGTCGAGGGCCCTACAGCTTGCTTTCAAATGGT +
Preference number: 1 (lower is better)
Translates to: LAAVMVSAVEMPLFS*VLPCRGPYSLLSNG
Trigger: ACCATTTGAAAGCAAGCTGTAGGGCCCTCGACATGGCAGCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR GCA 90 bp TGGGCCTTCCAACTCACTAAGCAGGCTGTGGGGCCTTGCTCTCCATaGTCTTCTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTC +
Preference number: 1 (lower is better)
Translates to: WAFQLTKQAVGPCSP*SSAFILAESEGKIL
Trigger: GAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTGCTTAGTGAGTTGGAAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp CGCTCACTTCAGCTGAAAGGAGAAAACACAGGGCTGATCCCAGCTTaGAGGGAAGGGGAAACGAAACGTTGTCTCTGGCCTGTGTCACCT +
Preference number: 1 (lower is better)
Translates to: RSLQLKGENTGLIPA*REGETKRCLWPVSP
Trigger: AGGTGACACAGGCCAGAGACAACGTTTCGTTTCCCCTTCCCTGCAAGCTGGGATCAGCCCTGTGTTTTCTCCTTTCAGCTGAAGTGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp CTGCAGTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTGGGTaGTGCCATGTCGAGGGCCCTACAGCTTGCTTTCAAATGGTTCAG +
Preference number: 1 (lower is better)
Translates to: LQSWSQLWRCPYSPG*CHVEGPTACFQMVQ
Trigger: CTGAACCATTTGAAAGCAAGCTGTAGGGCCCTCGACATGGCAGCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR CCA 90 bp GGGCATTTTCAGGAGCTCTTAGCAAAGCAGCCTCAGTCCGTTTCCTaGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACCTGTGG +
Preference number: 1 (lower is better)
Translates to: GHFQELLAKQPQSVS*QYPTLNQPLGRDLW
Trigger: CCACAGGTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGGCTGCTTTGCTAAGAGCTCCTGAAAATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp ACGTTTGTGAGAACTGCTGGAATCACAAGCTGCGGCAGAGGTGACTaGAGCATTTCCACTCCGTTCACATATAGCGCCCCAGCTTGGCAC +
Preference number: 1 (lower is better)
Translates to: TFVRTAGITSCGRGD*SISTPFTYSAPAWH
Trigger: GTGCCAAGCTGGGGCGCTATATGTGAACGGAGTGGAAATGCTTCAGTCACCTCTGCCGCAGCTTGTGATTCCAGCAGTTCTCACAAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp TATTTCAGTGAGAAGAGAGCACCTAAACCTGGGTCTGAAAACACATaGAAACTCCAGGCCTTGCTCCCGGCCCTTCTGCACATTGGGGGC +
Preference number: 1 (lower is better)
Translates to: YFSEKRAPKPGSENT*KLQALLPALLHIGG
Trigger: GCCCCCAATGTGCAGAAGGGCCGGGAGCAAGGCCTGGAGTTTTCATGTGTTTTCAGACCCAGGTTTAGGTGCTCTCTTCTCACTGAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp GCCAGGGGAAGGAAGAAGTGTGCTTGTATATGGCACCTCCAAGCCTaGAGTCCGTGGAAAACCCACGTTCAGCTGCTATTACCTACTGGA +
Preference number: 1 (lower is better)
Translates to: ARGRKKCACIWHLQA*SPWKTHVQLLLPTG
Trigger: TCCAGTAGGTAATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATACAAGCACACTTCTTCCTTCCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp CAGAAACAGGTTCTTGCTGGGCCTTCCAACTCACTAAGCAGGCTGTaGGGCCTTGCTCTCCATGCTCTTCTGCCTTCATACTTGCTGAAT +
Preference number: 1 (lower is better)
Translates to: QKQVLAGPSNSLSRL*GLALHALLPSYLLN
Trigger: ATTCAGCAAGTATGAAGGCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTGCTTAGTGAGTTGGAAGGCCCAGCAAGAACCTGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp CAGAGTCTGAAACCTGGGCTGCAGGTCAACAATCTCGAGCAGTTATaGAAAGACCAGGGTTACTGGAGACCAAGAAAGGAACGAGCGGAG +
Preference number: 1 (lower is better)
Translates to: QSLKPGLQVNNLEQL*KDQGYWRPRKERAE
Trigger: CTCCGCTCGTTCCTTTCTTGGTCTCCAGTAACCCTGGTCTTTTCATAACTGCTCGAGATTGTTGACCTGCAGCCCAGGTTTCAGACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp CAAGGTAATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTaGCTCGCTTTCCCATTCATATGTGTGGCACAGCTTACTGGCTGG +
Preference number: 1 (lower is better)
Translates to: QGNYPQACRNSHEHN*LAFPFICVAQLTGW
Trigger: CCAGCCAGTAAGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAATTACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp ATTCTGCACGTGCAGGCGTGCACACAAGGTAATTACCCACAAGCCTaGAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATA +
Preference number: 1 (lower is better)
Translates to: ILHVQACTQGNYPQA*RNSHEHNCLAFPFI
Trigger: TATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAATTACCTTGTGTGCACGCCTGCACGTGCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp CGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAACGTTCTGTTaGTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAA +
Preference number: 1 (lower is better)
Translates to: RSCCARKNGHLRTFC*LALRTVVAFTFRCE
Trigger: TTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAACGTTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp TGCCCTTATTCTCCTGGGTGCTGCCATGTCGAGGGCCCTACAGCTTaGTTTCAAATGGTTCAGCAGAAAGTGTCTTTAACACCTGTGGAG +
Preference number: 1 (lower is better)
Translates to: CPYSPGCCHVEGPTA*FQMVQQKVSLTPVE
Trigger: CTCCACAGGTGTTAAAGACACTTTCTGCTGAACCATTTGAAAGCAAGCTGTAGGGCCCTCGACATGGCAGCACCCAGGAGAATAAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR TCA 90 bp GTGCAAGGAAGAACGGCCATCTCAGAACGTTCTGTTGCTTGGCATTaGGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATGACCGTT +
Preference number: 1 (lower is better)
Translates to: VQGRTAISERSVAWH*EQWWPSPFDVKMTV
Trigger: AACGGTCATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAACGTTCTGAGATGGCCGTTCTTCCTTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp GTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTaGCACAGAAAGGTCATAGTGCATTTCTCAAAGCACTGCCAATCT +
Preference number: 1 (lower is better)
Translates to: VGDSGVPNVPSVYSH*HRKVIVHFSKHCQS
Trigger: AGATTGGCAGTGCTTTGAGAAATGCACTATGACCTTTCTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 90 bp AAAGAAACTGACCAGCAGAAAGTGACTATTCTGCACGTGCAGGCGTaGACACAAGGTAATTACCCACAAGCCTGCAGAAACTCACACGAG +
Preference number: 1 (lower is better)
Translates to: KETDQQKVTILHVQA*TQGNYPQACRNSHE
Trigger: CTCGTGTGAGTTTCTGCAGGCTTGTGGGTAATTACCTTGTGTGCACGCCTGCACGTGCAGAATAGTCACTTTCTGCTGGTCAGTTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp TTACTAGCCTTCAGCTCAGGCTGGTTCTTAACTGCCCATCAGCTGTaGACACATGCCCTTGCTGAAAGCTGTTTGGCCCAAATGTGTAAA +
Preference number: 1 (lower is better)
Translates to: LLAFSSGWFLTAHQL*THALAESCLAQMCK
Trigger: TTTACACATTTGGGCCAAACAGCTTTCAGCAAGGGCATGTGTCCACAGCTGATGGGCAGTTAAGAACCAGCCTGAGCTGAAGGCTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp TTGTCCTATGGGCAAACTTGCTTTAATTTAAAGCACTGTGAGGGCTaGAGGCAGATGATCCTGTCTCCAAGCATGGACTCTGGCCAGAAC +
Preference number: 1 (lower is better)
Translates to: LSYGQTCFNLKHCEG*RQMILSPSMDSGQN
Trigger: GTTCTGGCCAGAGTCCATGCTTGGAGACAGGATCATCTGCCTTCAGCCCTCACAGTGCTTTAAATTAAAGCAAGTTTGCCCATAGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp GAAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTaGCACAGCTTACTGGCTGGTGCTAGCATACTACACATAAATACA +
Preference number: 1 (lower is better)
Translates to: ETHTSTTASLSHSYV*HSLLAGASILHINT
Trigger: TGTATTTATGTGTAGTATGCTAGCACCAGCCAGTAAGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp GGAATTATACAAGCTGCTTCTTTTCATCATGTGACAGAACGTTTGTaGGAACTGCTGGAATCACAAGCTGCGGCAGAGGTGACTGAAGCA +
Preference number: 1 (lower is better)
Translates to: GIIQAASFHHVTERL*ELLESQAAAEVTEA
Trigger: TGCTTCAGTCACCTCTGCCGCAGCTTGTGATTCCAGCAGTTCTCACAAACGTTCTGTCACATGATGAAAAGAAGCAGCTTGTATAATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp CATTCTTTTCTAAGTGCGAACTGTCTTAGAACTTACCCAAGTCAGTaGATGAGTAGCTGGGAGAAAGGGGTATGTGGCCAGCCATTAAAG +
Preference number: 1 (lower is better)
Translates to: HSFLSANCLRTYPSQ*MSSWEKGVCGQPLK
Trigger: CTTTAATGGCTGGCCACATACCCCTTTCTCCCAGCTACTCATTCACTGACTTGGGTAAGTTCTAAGACAGTTCGCACTTAGAAAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp TTGCTGTTAACAACACTGAAGACTAGTAGCAGAGGAGTGAAAGTGTaGGTTAAGAGCCTTAAAAACTTGTGGAAAGGGCTCGATGCCAGT +
Preference number: 1 (lower is better)
Translates to: LLLTTLKTSSRGVKV*VKSLKNLWKGLDAS
Trigger: ACTGGCATCGAGCCCTTTCCACAAGTTTTTAAGGCTCTTAACCCACACTTTCACTCCTCTGCTACTAGTCTTCAGTGTTGTTAACAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp ATGAAACACCAGTTGGAATTATACAAGCTGCTTCTTTTCATCATGTaGCAGAACGTTTGTGAGAACTGCTGGAATCACAAGCTGCGGCAG +
Preference number: 1 (lower is better)
Translates to: MKHQLELYKLLLFIM*QNVCENCWNHKLRQ
Trigger: CTGCCGCAGCTTGTGATTCCAGCAGTTCTCACAAACGTTCTGTCACATGATGAAAAGAAGCAGCTTGTATAATTCCAACTGGTGTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 90 bp CCATCACACCAACACAAGCATGAATACAAAGTGAAAGCATGTTCTTaGCATGAAAACCATCTACTCACACCCCACCTTGCTCCTAAAGTA +
Preference number: 1 (lower is better)
Translates to: PSHQHKHEYKVKACS*HENHLLTPHLAPKV
Trigger: TACTTTAGGAGCAAGGTGGGGTGTGAGTAGATGGTTTTCATGCCAAGAACATGCTTTCACTTTGTATTCATGCTTGTGTTGGTGTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp TTTTGTTTCCGGCCTTATCTGTCAGTATTCCTTTCAGGCACATTCTaGGATTCACAACTGTGTTCTTTAAACAGCCAAAATTCCCTCTTC +
Preference number: 1 (lower is better)
Translates to: FCFRPYLSVFLSGTF*DSQLCSLNSQNSLF
Trigger: GAAGAGGGAATTTTGGCTGTTTAAAGAACACAGTTGTGAATCTCAGAATGTGCCTGAAAGGAATACTGACAGATAAGGCCGGAAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp TTGATAACGAATTTTGACACTGACCCTGACAGAAGGGCACAGCTGTaGGAAAAATCATTAAGAATTGTAATTGTTGAGGAGCCACTTGGA +
Preference number: 1 (lower is better)
Translates to: LITNFDTDPDRRAQL*EKSLRIVIVEEPLG
Trigger: TCCAAGTGGCTCCTCAACAATTACAATTCTTAATGATTTTTCTCACAGCTGTGCCCTTCTGTCAGGGTCAGTGTCAAAATTCGTTATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp AGGACTCTGGCTCTACCAAGAAGAGGCAATAGAGAATTCTTTCAATaGAACAATGTATGGATACAGGGCTATCGTTATTTTGGATATTGT +
Preference number: 1 (lower is better)
Translates to: RTLALPRRGNREFFQ*NNVWIQGYRYFGYC
Trigger: ACAATATCCAAAATAACGATAGCCCTGTATCCATACATTGTTTCATTGAAAGAATTCTCTATTGCCTCTTCTTGGTAGAGCCAGAGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 90 bp CAGAAGGGCACAGCTGTGAGAAAAATCATTAAGAATTGTAATTGTTaGGGAGCCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCT +
Preference number: 1 (lower is better)
Translates to: QKGTAVRKIIKNCNC*GATWMLSTFYKLYP
Trigger: AGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGGCTCCTCAACAATTACAATTCTTAATGATTTTTCTCACAGCTGTGCCCTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTCTGCAGAAGGGCCAGTaGGGTCCACCCCCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPLQKGQ*GPPPGA
Trigger: TGCCCCTGGGGGTGGACCCCACTGGCCCTTCTGCAG...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp CCCAGCCCTGTGCAGCACAAGGCTCCCTGCTCAGTGTGGCACCAGTaGGGCAGCCGTCAACATCTGTGCCAGTGTTGCCACCTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: PSPVQHKAPCSVWHQ*GSRQHLCQCCHLGK
Trigger: CTTGCCCAGGTGGCAACACTGGCACAGATGTTGACGGCTGCCCAACTGGTGCCACACTGAGCAGGGAGCCTTGTGCTGCACAGGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGGACCCCACACAGGGTaGCCTTGGCCTCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEGPHTG*PWPPGP
Trigger: GGGCCCTGGAGGCCAAGGCCACCCTGTGTGGGGTCC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTGAAAACTCCAGGCCTTaGTCCCGGCCCTTCTGCACA +
Preference number: 2 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPENSRP*SRPFCT
Trigger: TGTGCAGAAGGGCCGGGAGCAAGGCCTGGAGTTTTC...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAACACCTAGCGGGCTCTaGTGTGTCCCAGCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISTPSGL*CVPAPW
Trigger: CCACGGAGCTGGGACACAGCAGAGCCCGCTAGGTGT...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGGCCCTTCTGCACATTaGGGGCGGGGCCAGAGCTCC +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDGPSAH*GRGQSS
Trigger: GGAGCTCTGGCCCCGCCCCCAATGTGCAGAAGGGCC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGGACCCCACACAGGGTaGCCTTGGCCTCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYGPHTG*PWPPGP
Trigger: GGGCCCTGGAGGCCAAGGCCACCCTGTGTGGGGTCC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTGCTCCCGGCCCTTCTaGACATTGGGGGCGGGGCCA +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYCSRPF*TLGAGP
Trigger: TGGCCCCGCCCCCAATGTGCAGAAGGGCCGGGAGCA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTTGCTCCCGGCCCTTCTaGACATTGGGGGCGGGGCCA +
Preference number: 2 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPCSRPF*TLGAGP
Trigger: TGGCCCCGCCCCCAATGTGCAGAAGGGCCGGGAGCA...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTGTGGCAGGGAGGAATaGAGACGCCCTGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDCGREE*RRPAGL
Trigger: CAGGCCAGCAGGGCGTCTGCATTCCTCCCTGCCACA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACAGGCTGTGGGGCCTTaGTCTCCATGCTCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISQAVGP*SPCSSA
Trigger: GGCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTCTGCAGAAGGGCCAGTaGGGTCCACCCCCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: INLQIRDTATSSRPGMSTLQKGQ*GPPPGA
Trigger: TGCCCCTGGGGGTGGACCCCACTGGCCCTTCTGCAG...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACACTCCATCGCAGGATaGAGCCCACCAGCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISHSIAG*SPPAGN
Trigger: GTTCCCTGCTGGTGGGCTCCATCCTGCGATGGAGTG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTTATCTGGTCAGATCCTaGTGCACTCCAGGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPYLVRS*CTPGPC
Trigger: ACAGGGACCTGGAGTGCATCAGGATCTGACCAGATA...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGGCAGGAGAATGGCATaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISGRRMA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCATGCCATTCTCCTGCC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGTTTGTGTAGGGACCTaGCTGCCAACAGGGACCCCA +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISVCVGT*LPTGTP
Trigger: TGGGGTCCCTGTTGGCAGCCAGGTCCCTACACAAAC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp ACTGAGGCTGTGCCCGAGGAACATGCCGTGTCCACCCCTTGGGACTaGGACGTCCTCTCAGGCCATCCTACATTACTGGAGTCTCCAATT +
Preference number: 2 (lower is better)
Translates to: TEAVPEEHAVSTPWD*DVLSGHPTLLESPI
Trigger: AATTGGAGACTCCAGTAATGTAGGATGGCCTGAGAGGACGTCCAAGTCCCAAGGGGTGGACACGGCATGTTCCTCGGGCACAGCCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAAGGGCTGAAGGCAGATaGTCCTGTCTCCAAGCATGG +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISRAEGR*SCLQAW
Trigger: CCATGCTTGGAGACAGGATCATCTGCCTTCAGCCCT...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTTGCCAAGGAGCAGCCTaGGACCCCGCCTGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTACQGAA*DPACSC
Trigger: ACAGCTGCAGGCGGGGTCTCAGGCTGCTCCTTGGCA...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCCCTCTTCTCCAGCATaGGCTGGAGGGTCAAGGGGT +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDPSSPA*AGGSRG
Trigger: ACCCCTTGACCCTCCAGCTCATGCTGGAGAAGAGGG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATTGTGGCAGGGAGGAATaGAGACGCCCTGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: ITHKPAETHTSTTASLSHCGREE*RRPAGL
Trigger: CAGGCCAGCAGGGCGTCTGCATTCCTCCCTGCCACA...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACACTGTCTCCACCCCTaGCCAATGATCCACTCAGAC +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISHCLHP*PMIHSD
Trigger: GTCTGAGTGGATCATTGGGCAGGGGTGGAGACAGTG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCAGGCTGTGGGGCCTTaGTCTCCATGCTCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDQAVGP*SPCSSA
Trigger: GGCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACGGTCCCTGTCTGTCCTaGAGCATTCGTGTGACCCAG +
Preference number: 2 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDGPCLS*SIRVTQ
Trigger: CTGGGTCACACGAATGCTCCAGGACAGACAGGGACC...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCACTCCATCGCAGGATaGAGCCCACCAGCAGGGAAC +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDHSIAG*SPPAGN
Trigger: GTTCCCTGCTGGTGGGCTCCATCCTGCGATGGAGTG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGGTGATGGGAGCTGGTaGCTGCTGCAGAAACAGGTT +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISGDGSW*LLQKQV
Trigger: AACCTGTTTCTGCAGCAGCCACCAGCTCCCATCACC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTCCTGGAGACAACAATaGGGCTGTGGGGGACAGCGG +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYSWRQQ*GCGGQR
Trigger: CCGCTGTCCCCCACAGCCTCATTGTTGTCTCCAGGA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCCTGGAGCATTCGTGTaGCCCAGCAGTGTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYPGAFV*PSSVLE
Trigger: CTCCAGGACACTGCTGGGTCACACGAATGCTCCAGG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTCTGCTGGCCTGTCTCTaGCCCCTCACATGCTGCACT +
Preference number: 2 (lower is better)
Translates to: INLQIRDTATSSRPGMSTLLACL*PLTCCT
Trigger: AGTGCAGCATGTGAGGGGTCAGAGACAGGCCAGCAG...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTAGGGCTCGATGCCAGTaGAGAGCACTTAGTTATTTC +
Preference number: 2 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPRARCQ*RALSYF
Trigger: GAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCT...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTCCAAGCATGGACTCTaGCCAGAACCCCCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: INLQIRDTATSSRPGMSTSKHGL*PEPPGG
Trigger: CCCTCCAGGGGGTTCTGGCCAGAGTCCATGCTTGGA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTATGCAGACGCCCTGCTaGCCTGTCTCTGACCCCTCA +
Preference number: 2 (lower is better)
Translates to: INLQIRDTATSSRPGMSTMQTPC*PVSDPS
Trigger: TGAGGGGTCAGAGACAGGCCAGCAGGGCGTCTGCAT...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp TGCAGGTCATATGCAAAACCTAGGAGGCCAAACAGGATTACTTGTTaGTGTAGGGACCTGGCTGCCAACAGGGACCCCACACAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: CRSYAKPRRPNRITC*CRDLAANRDPTQGG
Trigger: GCCACCCTGTGTGGGGTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCTAGGTTTTGCATATGACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp TCGCTCACTTCAGCTGAAAGGAGAAAACACAGGGCTGATCCCAGCTaGCAGGGAAGGGGAAACGAAACGTTGTCTCTGGCCTGTGTCACC +
Preference number: 2 (lower is better)
Translates to: SLTSAERRKHRADPS*QGRGNETLSLACVT
Trigger: GGTGACACAGGCCAGAGACAACGTTTCGTTTCCCCTTCCCTGCAAGCTGGGATCAGCCCTGTGTTTTCTCCTTTCAGCTGAAGTGAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATTTGCAATCAGAGTCTaGAACCTGGGCTGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISFAIRV*NLGCRS
Trigger: TGACCTGCAGCCCAGGTTTCAGACTCTGATTGCAAA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAGGGCTGAAGGCAGATaGTCCTGTCTCCAAGCATGG +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDRAEGR*SCLQAW
Trigger: CCATGCTTGGAGACAGGATCATCTGCCTTCAGCCCT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAGCACAGGCCCATTATaGCTCCCTGAAGCACAGGCT +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDSTGPL*LPEAQA
Trigger: AGCCTGTGCTTCAGGGAGTCATAATGGGCCTGTGCT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATGAAAACTCCAGGCCTTaGTCCCGGCCCTTCTGCACA +
Preference number: 2 (lower is better)
Translates to: ITHKPAETHTSTTASLSHENSRP*SRPFCT
Trigger: TGTGCAGAAGGGCCGGGAGCAAGGCCTGGAGTTTTC...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTCACCCAGGCTGGAGTaGAGTGACACGATCATGACT +
Preference number: 2 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSPRLE*SDTIMT
Trigger: AGTCATGATCGTGTCACTGCACTCCAGCCTGGGTGA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTGGAATGCAGACGCCCTaGTGGCCTGTCTCTGACCCC +
Preference number: 2 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLGMQTP*WPVSDP
Trigger: GGGGTCAGAGACAGGCCAGCAGGGCGTCTGCATTCC...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCAGGGGCAGCAGGGATaGTCACGAAGGAAACCATGC +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYQGQQG*SRRKPC
Trigger: GCATGGTTTCCTTCGTGACCATCCCTGCTGCCCCTG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATCATCCTTTCTCGCCTaGTTCACTCCATCGCAGGAT +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISSSFLA*FTPSQD
Trigger: ATCCTGCGATGGAGTGAACCAGGCGAGAAAGGATGA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGCAAGTCTCTGTTCCTaGGGCATGTCCAGGTGCAAC +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDASLCS*GMSRCN
Trigger: GTTGCACCTGGACATGCCCCAGGAACAGAGACTTGC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACTCACTAAGCAGGCTGTaGGGCCTTGCTCTCCATGCT +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDSLSRL*GLALHA
Trigger: AGCATGGAGAGCAAGGCCCCACAGCCTGCTTAGTGA...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATGCAGTGACACGATCATaGCTGATTGCAGCCTCGACC +
Preference number: 2 (lower is better)
Translates to: ITHKPAETHTSTTASLSHAVTRS*LIAAST
Trigger: GGTCGAGGCTGCAATCAGTCATGATCGTGTCACTGC...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTCCTGGAGCATTCGTGTaGCCCAGCAGTGTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLPGAFV*PSSVLE
Trigger: CTCCAGGACACTGCTGGGTCACACGAATGCTCCAGG...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATGCCTTCATACTTGCTaGATCCGAAGGCAAGATCCT +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISCLHTC*IRRQDP
Trigger: AGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTCATCTGTGCCAGTGTTaGCACCTGGGCAAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: INLQIRDTATSSRPGMSTHLCQC*HLGKSL
Trigger: CAGAGACTTGCCCAGGTGGCAACACTGGCACAGATG...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCTGCACGTGCAGGCGTaGACACAAGGTAATTACCCA +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDLHVQA*TQGNYP
Trigger: TGGGTAATTACCTTGTGTGCACGCCTGCACGTGCAG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATCAGAGTCTGAAACCTaGGCTGCAGGTCAACAATCT +
Preference number: 2 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISSESET*AAGQQS
Trigger: AGATTGTTGACCTGCAGCCCAGGTTTCAGACTCTGA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATGCTCCCTGCTCAGTGTaGCACCAGTTGGGCAGCCGT +
Preference number: 2 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDAPCSV*HQLGSR
Trigger: ACGGCTGCCCAACTGGTGCCACACTGAGCAGGGAGC...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTCTTCTTTCTTCCCTCTaGAATTCAGGGGTTAAATCC +
Preference number: 2 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPLLSSL*NSGVKS
Trigger: GGATTTAACCCCTGAATTCCAGAGGGAAGAAAGAAG...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAGACCCGGGAGGCTGTaGACAGCGCGTCCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLRPGRL*TARPLK
Trigger: TTTCAGAGGACGCGCTGTCCACAGCCTCCCGGGTCT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGGAGAAAGGGGTATGTaGCCAGCCATTAAAGTCACC +
Preference number: 2 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEGERGM*PAIKVT
Trigger: GGTGACTTTAATGGCTGGCCACATACCCCTTTCTCC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp AGCAGGCTGTGGGGCCTTGCTCTCCATGCTCTTCTGCCTTCATACTaGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTGTT +
Preference number: 2 (lower is better)
Translates to: SRLWGLALHALLPSY*LNPKARSSPMLPLV
Trigger: AACAAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTACACCAACACAAGCATaGATACAAAGTGAAAGCATG +
Preference number: 2 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPTPTQA*IQSESM
Trigger: CATGCTTTCACTTTGTATTCATGCTTGTGTTGGTGT...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTGCAGTGACACGATCATaGCTGATTGCAGCCTCGACC +
Preference number: 2 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAAVTRS*LIAAST
Trigger: GGTCGAGGCTGCAATCAGTCATGATCGTGTCACTGC...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATAAGCACTGTGAGGGCTaGAGGCAGATGATCCTGTCT +
Preference number: 2 (lower is better)
Translates to: ITHKPAETHTSTTASLSHKHCEG*RQMILS
Trigger: AGACAGGATCATCTGCCTTCAGCCCTCACAGTGCTT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATCCACCCCTGCCCAATaGTCCACTCAGACCCGGGAG +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRSTPAQ*STQTRE
Trigger: CTCCCGGGTCTGAGTGGATCATTGGGCAGGGGTGGA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTCATCTGTGCCAGTGTTaGCACCTGGGCAAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAHLCQC*HLGKSL
Trigger: CAGAGACTTGCCCAGGTGGCAACACTGGCACAGATG...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAGCCGTCAACATCTGTaGCAGTGTTGCCACCTGGGC +
Preference number: 2 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLSRQHL*QCCHLG
Trigger: GCCCAGGTGGCAACACTGGCACAGATGTTGACGGCT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAAATTACCCACAAGCCTaGAGAAACTCACACGAGCAC +
Preference number: 2 (lower is better)
Translates to: AAEQPAVAAVQGRTAISENYPQA*RNSHEH
Trigger: GTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAATT...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAACACCTAGCGGGCTCTaGTGTGTCCCAGCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRTPSGL*CVPAPW
Trigger: CCACGGAGCTGGGACACAGCAGAGCCCGCTAGGTGT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCTCTCTAGAGAAGAATaGTGGAGGGCAGGAAAGCCC +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYLSREE*WRAGKP
Trigger: GGGCTTTCCTGCCCTCCAGCATTCTTCTCTAGAGAG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTCAGAGTCTGAAACCTaGGCTGCAGGTCAACAATCT +
Preference number: 2 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSESET*AAGQQS
Trigger: AGATTGTTGACCTGCAGCCCAGGTTTCAGACTCTGA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACTCATCCTTTCTCGCCTaGTTCACTCCATCGCAGGAT +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDSSFLA*FTPSQD
Trigger: ATCCTGCGATGGAGTGAACCAGGCGAGAAAGGATGA...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTCAGTGTGGCACCAGTTaGGCAGCCGTCAACATCTGT +
Preference number: 2 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAQCGTS*AAVNIC
Trigger: ACAGATGTTGACGGCTGCCCAACTGGTGCCACACTG...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACTGTGGCACAGCTTACTaGCTGGTGCTAGCATACTAC +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDCGTAY*LVLAYY
Trigger: GTAGTATGCTAGCACCAGCCAGTAAGCTGTGCCACA...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTCTGGGGCACCATGGGTaGATAAAGAAACTGACCAGC +
Preference number: 2 (lower is better)
Translates to: INLQIRDTATSSRPGMSTLGHHG*IKKLTS
Trigger: GCTGGTCAGTTTCTTTATCCACCCATGGTGCCCCAG...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATAGACCCGGGAGGCTGTaGACAGCGCGTCCTCTGAAA +
Preference number: 2 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDRPGRL*TARPLK
Trigger: TTTCAGAGGACGCGCTGTCCACAGCCTCCCGGGTCT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTTTTGCAATCAGAGTCTaGAACCTGGGCTGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPFAIRV*NLGCRS
Trigger: TGACCTGCAGCCCAGGTTTCAGACTCTGATTGCAAA...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCTAGTAGCAGAGGAGTaGAAGTGTGGGTTAAGAGCC +
Preference number: 2 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPLVAEE*KCGLRA
Trigger: GGCTCTTAACCCACACTTTCACTCCTCTGCTACTAG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACATTTTCCAGGATTCCTaGAGTCCAGCCTCAAGGGAT +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDIFQDS*SPASRD
Trigger: ATCCCTTGAGGCTGGACTTCAGGAATCCTGGAAAAT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGGACAGCGCGTCCTCTaGAATGCTGGTCTCCACACC +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRGQRVL*NAGLHT
Trigger: GGTGTGGAGACCAGCATTTCAGAGGACGCGCTGTCC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACTGCCTTCATACTTGCTaGATCCGAAGGCAAGATCCT +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDCLHTC*IRRQDP
Trigger: AGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCA...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATTGGGGCATGTCCAGGTaGAACATGAAGAACATCGTC +
Preference number: 2 (lower is better)
Translates to: ITHKPAETHTSTTASLSHWGMSR*NMKNIV
Trigger: GACGATGTTCTTCATGTTGCACCTGGACATGCCCCA...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTGGGGCATGTCCAGGTaGAACATGAAGAACATCGTC +
Preference number: 2 (lower is better)
Translates to: INLQIRDTATSSRPGMSTWGMSR*NMKNIV
Trigger: GACGATGTTCTTCATGTTGCACCTGGACATGCCCCA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGCAAAAACTCCTATCTaGTCAGATCCTGATGCACTC +
Preference number: 2 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEAKTPI*SDPDAL
Trigger: GAGTGCATCAGGATCTGACCAGATAGGAGTTTTTGC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTCAGTGTGGCACCAGTTaGGCAGCCGTCAACATCTGT +
Preference number: 2 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLQCGTS*AAVNIC
Trigger: ACAGATGTTGACGGCTGCCCAACTGGTGCCACACTG...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATCCCTTCCAGGGTATTTaGATGCCTGCAGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: ITHKPAETHTSTTASLSHPFQGI*MPAGRK
Trigger: TTTCCTTCCTGCAGGCATCCAAATACCCTGGAAGGG...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTGGGGCTGGGGCACCATaGGTGGATAAAGAAACTGAC +
Preference number: 2 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLGAGAP*VDKETD
Trigger: GTCAGTTTCTTTATCCACCCATGGTGCCCCAGCCCC...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp AGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAACGTTCTGTTGCTaGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGAT +
Preference number: 2 (lower is better)
Translates to: SCCARKNGHLRTFCC*ALRTVVAFTFRCED
Trigger: ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAACGTTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp ATGCCCTTATTCTCCTGGGTGCTGCCATGTCGAGGGCCCTACAGCTaGCTTTCAAATGGTTCAGCAGAAAGTGTCTTTAACACCTGTGGA +
Preference number: 2 (lower is better)
Translates to: MPLFSWVLPCRGPYS*LSNGSAESVFNTCG
Trigger: TCCACAGGTGTTAAAGACACTTTCTGCTGAACCATTTGAAAGCAAGCTGTAGGGCCCTCGACATGGCAGCACCCAGGAGAATAAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAATCTCGAGCAGTTATaGAAAGACCAGGGTTACTGG +
Preference number: 2 (lower is better)
Translates to: RRPNRITCLCRDLAANRDNLEQL*KDQGYW
Trigger: CCAGTAACCCTGGTCTTTTCATAACTGCTCGAGATT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAATCTGTACTTTCTTCTTaGCTTAACAGGGGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKSVLSS*LNRGLL
Trigger: GAGGAGACCCCTGTTAAGTCAAGAAGAAAGTACAGA...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATATTTTCCAGGATTCCTaGAGTCCAGCCTCAAGGGAT +
Preference number: 2 (lower is better)
Translates to: ITHKPAETHTSTTASLSHIFQDS*SPASRD
Trigger: ATCCCTTGAGGCTGGACTTCAGGAATCCTGGAAAAT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATACAGCTACGCAACTGTaGCACCTCAGAGAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYTATQL*HLREVD
Trigger: ATCTACTTCTCTGAGGTGGCACAGTTGCGTAGCTGT...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATACAGCTACGCAACTGTaGCACCTCAGAGAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: ITHKPAETHTSTTASLSHTATQL*HLREVD
Trigger: ATCTACTTCTCTGAGGTGGCACAGTTGCGTAGCTGT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTTCCAGGGTATTTGGATaGCTGCAGGAAGGAAACTGG +
Preference number: 2 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTASRVFG*LQEGNW
Trigger: CCAGTTTCCTTCCTGCAGGCATCCAAATACCCTGGA...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTCACACGAGCACAACTaGCTCGCTTTCCCATTCATA +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYSHEHN*LAFPFI
Trigger: TATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCCCTGGGATGTCCACTaGATCACCCACTTAGCACAG +
Preference number: 2 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDPWDVH*ITHLAQ
Trigger: CTGTGCTAAGTGGGTGATGCAGTGGACATCCCAGGG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGGTCCCTGTCTGTCCTaGAGCATTCGTGTGACCCAG +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRGPCLS*SIRVTQ
Trigger: CTGGGTCACACGAATGCTCCAGGACAGACAGGGACC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACAGGGGCAGCAGGGATaGTCACGAAGGAAACCATGC +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRQGQQG*SRRKPC
Trigger: GCATGGTTTCCTTCGTGACCATCCCTGCTGCCCCTG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTCCCATTCATATGTGTaGCACAGCTTACTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: INLQIRDTATSSRPGMSTSHSYV*HSLLAG
Trigger: ACCAGCCAGTAAGCTGTGCCACACATATGAATGGGA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATaGACACAGAAAGGTCATAGTGCATTTCTCAAAGCACTGCCAATC +
Preference number: 2 (lower is better)
Translates to: CGGQRGPECSFCIFP*TQKGHSAFLKALPI
Trigger: GATTGGCAGTGCTTTGAGAAATGCACTATGACCTTTCTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CTGCAAGTATTAGAGTATATCAGCGGCTCTTCAAACTGTGAAGATCCCTGGAGGGGGTGGTCTCATAGCTaGTGCCATTCCTCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: LQVLEYISGSSNCEDPWRGWSHS*CHSSSC
Trigger: ACAGGAAGAGGAATGGCATCAGCTATGAGACCACCC...CCTCCAGGGATCTTCACAGTTTGAAGAGCCGCTGATATACTCTAATACTTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395806.5
3UTR-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTAATCTCGAGCAGTTATaGAAAGACCAGGGTTACTGG +
Preference number: 2 (lower is better)
Translates to: INLQIRDTATSSRPGMSTNLEQL*KDQGYW
Trigger: CCAGTAACCCTGGTCTTTTCATAACTGCTCGAGATT...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTAGCATGTTCTTGGCATaGAAACCATCTACTCACACC +
Preference number: 2 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPSMFLA*KPSTHT
Trigger: GGTGTGAGTAGATGGTTTTCATGCCAAGAACATGCT...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACAGCATGAATACAAAGTaGAAGCATGTTCTTGGCATG +
Preference number: 2 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSMNTK*KHVLGM
Trigger: CATGCCAAGAACATGCTTTCACTTTGTATTCATGCT...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCATCCTGGAGACAACAATaGGGCTGTGGGGGACAGCGG +
Preference number: 2 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPSWRQQ*GCGGQR
Trigger: CCGCTGTCCCCCACAGCCTCATTGTTGTCTCCAGGA...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTCACCCAGGCTGGAGTaGAGTGACACGATCATGACT +
Preference number: 2 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSPRLE*SDTIMT
Trigger: AGTCATGATCGTGTCACTGCACTCCAGCCTGGGTGA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCACCCCAAATTAGGCTaGAGGTCATATGCAAAACCT +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYHPKLG*RSYAKP
Trigger: AGGTTTTGCATATGACCTGCAGCCTAATTTGGGGTG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATAGTCCTTTTAGAAAGTaGGCTCTTTTGCCAGCACTG +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYSPFRK*ALLPAL
Trigger: CAGTGCTGGCAAAAGAGCCCACTTTCTAAAAGGACT...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGGGGTCTGAAAACACATaGAAACTCCAGGCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: KLVERARCQWRALSYFSEGSENT*KLQALL
Trigger: GAGCAAGGCCTGGAGTTTTCATGTGTTTTCAGACCC...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACTGACCAGCAGAAAGTaGCTATTCTGCACGTGCAGG +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRLTSRK*LFCTCR
Trigger: CCTGCACGTGCAGAATAGTCACTTTCTGCTGGTCAG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGTGGAAAGGGCTCGATaGCAGTGGAGAGCACTTAGT +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRVERAR*QWRALS
Trigger: ACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCAC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCATTTCTCAAAGCACTaGCAATCTAAATGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYHFSKH*QSKWSG
Trigger: CCCTGACCATTTAGATTGGCAGTGCTTTGAGAAATG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCATTTCTCAAAGCACTaGCAATCTAAATGGTCAGGG +
Preference number: 2 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPHFSKH*QSKWSG
Trigger: CCCTGACCATTTAGATTGGCAGTGCTTTGAGAAATG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGGAATGCAGACGCCCTaGTGGCCTGTCTCTGACCCC +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEGMQTP*WPVSDP
Trigger: GGGGTCAGAGACAGGCCAGCAGGGCGTCTGCATTCC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAATTACCCACAAGCCTaGAGAAACTCACACGAGCAC +
Preference number: 2 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLNYPQA*RNSHEH
Trigger: GTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAATT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAGCGCGTCCTCTGAAATaGTGGTCTCCACACCTGCCT +
Preference number: 2 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPARPLK*WSPHLP
Trigger: AGGCAGGTGTGGAGACCAGCATTTCAGAGGACGCGC...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAGCCTCCTGAGTAGCTaGGACTACAGCTACGCAACT +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRSLLSS*DYSYAT
Trigger: AGTTGCGTAGCTGTAGTCCCAGCTACTCAGGAGGCT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACTGGGGCACCATGGGTaGATAAAGAAACTGACCAGC +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRLGHHG*IKKLTS
Trigger: GCTGGTCAGTTTCTTTATCCACCCATGGTGCCCCAG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGTCTCCACACCTGCCTaGGGCTGGGGCACCATGGGT +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQVSTPA*GWGTMG
Trigger: ACCCATGGTGCCCCAGCCCCAGGCAGGTGTGGAGAC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp AGTGTTGAGCTACTGACTCCCCTACCCTGCCAAGAGCCTTTTCTTTaGTTGAAGGATTTCAGAGAAGGGAGATGTCTTCCCTTTACAGAG +
Preference number: 2 (lower is better)
Translates to: SVELLTPLPCQEPFL*LKDFREGRCLPFTE
Trigger: CTCTGTAAAGGGAAGACATCTCCCTTCTCTGAAATCCTTCAACAAAAGAAAAGGCTCTTGGCAGGGTAGGGGAGTCAGTAGCTCAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTACACCAACACAAGCATaGATACAAAGTGAAAGCATG +
Preference number: 2 (lower is better)
Translates to: INLQIRDTATSSRPGMSTTPTQA*IQSESM
Trigger: CATGCTTTCACTTTGTATTCATGCTTGTGTTGGTGT...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACTAGTAGCAGAGGAGTaGAAGTGTGGGTTAAGAGCC +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRLVAEE*KCGLRA
Trigger: GGCTCTTAACCCACACTTTCACTCCTCTGCTACTAG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATCCACCCCTGCCCAATaGTCCACTCAGACCCGGGAG +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQSTPAQ*STQTRE
Trigger: CTCCCGGGTCTGAGTGGATCATTGGGCAGGGGTGGA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAAGGCAGGGAGCTGTCTaGAGAAGGGCCAGTGGGGTC +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQRQGAV*RRASGV
Trigger: GACCCCACTGGCCCTTCTGCAGACAGCTCCCTGCCT...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTTATCTATATCTGATATaGGGCCTTGCTTTGTCACCC +
Preference number: 2 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAYLYLI*GLALSP
Trigger: GGGTGACAAAGCAAGGCCCCATATCAGATATAGATA...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGCCAGGAAGGGCAGGTaGTGGACCTCAGAGAACGGC +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQARKGR*WTSENG
Trigger: GCCGTTCTCTGAGGTCCACCACCTGCCCTTCCTGGC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATCCAAGCATGGACTCTaGCCAGAACCCCCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHESKHGL*PEPPGG
Trigger: CCCTCCAGGGGGTTCTGGCCAGAGTCCATGCTTGGA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATGTGGCACAGCTTACTaGCTGGTGCTAGCATACTAC +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRCGTAY*LVLAYY
Trigger: GTAGTATGCTAGCACCAGCCAGTAAGCTGTGCCACA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTCTGTACTTTCTTCTTaGCTTAACAGGGGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSVLSS*LNRGLL
Trigger: GAGGAGACCCCTGTTAAGTCAAGAAGAAAGTACAGA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTGTTCTCATCAGATTCTaGCATCCTCTGTACTTTCTT +
Preference number: 2 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAVLIRF*HPLYFL
Trigger: AAGAAAGTACAGAGGATGTCAGAATCTGATGAGAAC...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGAGCATGTTCTTGGCATaGAAACCATCTACTCACACC +
Preference number: 2 (lower is better)
Translates to: KLVERARCQWRALSYFSESMFLA*KPSTHT
Trigger: GGTGTGAGTAGATGGTTTTCATGCCAAGAACATGCT...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGTGGCTGTCCCTGTATaGGGGCTCTTCAGAAACGCC +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEVAVPV*GLFRNA
Trigger: GGCGTTTCTGAAGAGCCCTCATACAGGGACAGCCAC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATGGCACCTCCAAGCCTaGAGTCCGTGGAAAACCCAC +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEWHLQA*SPWKTH
Trigger: GTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAACAGCACAAGGCTCCCTaGTCAGTGTGGCACCAGTTG +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEQHKAP*SVWHQL
Trigger: CAACTGGTGCCACACTGAGCAGGGAGCCTTGTGCTG...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATAAAGACCAGGGTTACTaGAGACCAAGAAAGGAACGA +
Preference number: 2 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDKDQGY*RPRKER
Trigger: TCGTTCCTTTCTTGGTCTCCAGTAACCCTGGTCTTT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAGGGCTCGATGCCAGTaGAGAGCACTTAGTTATTTC +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRRARCQ*RALSYF
Trigger: GAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTTATCTATATCTGATATaGGGCCTTGCTTTGTCACCC +
Preference number: 2 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLYLYLI*GLALSP
Trigger: GGGTGACAAAGCAAGGCCCCATATCAGATATAGATA...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATGCAAAAACTCCTATCTaGTCAGATCCTGATGCACTC +
Preference number: 2 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDAKTPI*SDPDAL
Trigger: GAGTGCATCAGGATCTGACCAGATAGGAGTTTTTGC...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAATGCAGACGCCCTGCTaGCCTGTCTCTGACCCCTCA +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQMQTPC*PVSDPS
Trigger: TGAGGGGTCAGAGACAGGCCAGCAGGGCGTCTGCAT...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATAAGGTGCGAAAACAGTaGGTAGATACCTTAATTCTA +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYKVRKQ*VDTLIL
Trigger: TAGAATTAAGGTATCTACCCACTGTTTTCGCACCTT...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp ACTAGTAGCAGAGGAGTGAAAGTGTGGGTTAAGAGCCTTAAAAACTaGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCA +
Preference number: 2 (lower is better)
Translates to: TSSRGVKVWVKSLKN*WKGLDASGEHLVIS
Trigger: TGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTTTTAAGGCTCTTAACCCACACTTTCACTCCTCTGCTACTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp TTAACTGCCCATCAGCTGTGGACACATGCCCTTGCTGAAAGCTGTTaGGCCCAAATGTGTAAACACAAGAACTGTACAAAGGTAAAACGA +
Preference number: 2 (lower is better)
Translates to: LTAHQLWTHALAESC*AQMCKHKNCTKVKR
Trigger: TCGTTTTACCTTTGTACAGTTCTTGTGTTTACACATTTGGGCCAAACAGCTTTCAGCAAGGGCATGTGTCCACAGCTGATGGGCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAGCATGAATACAAAGTaGAAGCATGTTCTTGGCATG +
Preference number: 2 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLSMNTK*KHVLGM
Trigger: CATGCCAAGAACATGCTTTCACTTTGTATTCATGCT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAGGGTCTGAAAACACATaGAAACTCCAGGCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPGSENT*KLQALL
Trigger: GAGCAAGGCCTGGAGTTTTCATGTGTTTTCAGACCC...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGTGGCTGTCCCTGTATaGGGGCTCTTCAGAAACGCC +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQVAVPV*GLFRNA
Trigger: GGCGTTTCTGAAGAGCCCTCATACAGGGACAGCCAC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAAGCACAGGCCCATTATaGCTCCCTGAAGCACAGGCT +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHESTGPL*LPEAQA
Trigger: AGCCTGTGCTTCAGGGAGTCATAATGGGCCTGTGCT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTCCTATGGGCAAACTTaGTTTAATTTAAAGCACTGT +
Preference number: 2 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYSYGQT*FNLKHC
Trigger: ACAGTGCTTTAAATTAAAGCAAGTTTGCCCATAGGA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAACAACCTGCCGTAGCTaGTGTGCAAGGAAGAACGGC +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHETTCRS*CARKNG
Trigger: GCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAAAGACCAGGGTTACTaGAGACCAAGAAAGGAACGA +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRKDQGY*RPRKER
Trigger: TCGTTCCTTTCTTGGTCTCCAGTAACCCTGGTCTTT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGGTGATGGGAGCTGGTaGCTGCTGCAGAAACAGGTT +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEGDGSW*LLQKQV
Trigger: AACCTGTTTCTGCAGCAGCCACCAGCTCCCATCACC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATATCTGGTCAGATCCTaGTGCACTCCAGGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEYLVRS*CTPGPC
Trigger: ACAGGGACCTGGAGTGCATCAGGATCTGACCAGATA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATCACGAAGGAAACCATaGCAGGAAGGGCAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQSRRKP*QEGQVV
Trigger: CACCACCTGCCCTTCCTGGCATGGTTTCCTTCGTGA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGTATTCACAAAGTACTaGATCCGAACACCTAAGGAC +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRVFTKY*IRTPKD
Trigger: GTCCTTAGGTGTTCGGATGCAGTACTTTGTGAATAC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATAGAGGAGTGAAAGTGTaGGTTAAGAGCCTTAAAAAC +
Preference number: 2 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDRGVKV*VKSLKN
Trigger: GTTTTTAAGGCTCTTAACCCACACTTTCACTCCTCT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGGGGCTGGGGCACCATaGGTGGATAAAGAAACTGAC +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQGAGAP*VDKETD
Trigger: GTCAGTTTCTTTATCCACCCATGGTGCCCCAGCCCC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAAAGCACTGTGAGGGCTaGAGGCAGATGATCCTGTCT +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQKHCEG*RQMILS
Trigger: AGACAGGATCATCTGCCTTCAGCCCTCACAGTGCTT...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCATGTCCAGGTGCAACATaGAGAACATCGTCATCCTTT +
Preference number: 2 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPCPGAT*RTSSSF
Trigger: AAAGGATGACGATGTTCTTCATGTTGCACCTGGACA...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATCCAGGGTATTTGGATaGCTGCAGGAAGGAAACTGG +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHESRVFG*LQEGNW
Trigger: CCAGTTTCCTTCCTGCAGGCATCCAAATACCCTGGA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAACCCTTCCAGGGTATTTaGATGCCTGCAGGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEPFQGI*MPAGRK
Trigger: TTTCCTTCCTGCAGGCATCCAAATACCCTGGAAGGG...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATTGCTGAAAGCTGTTTaGCCCAAATGTGTAAACACA +
Preference number: 2 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRLLKAV*PKCVNT
Trigger: TGTGTTTACACATTTGGGCCAAACAGCTTTCAGCAA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGGGAAGGAAGAAGTGTaGTTGTATATGGCACCTCCA +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEGKEEV*LYMAPP
Trigger: TGGAGGTGCCATATACAAGCACACTTCTTCCTTCCC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 90 bp GTGCCACCTCAGAGAAGTAGATTTTTAAACAAACCCAATTTTCTCTaGCTGTTAACAACACTGAAGACTAGTAGCAGAGGAGTGAAAGTG +
Preference number: 2 (lower is better)
Translates to: VPPQRSRFLNKPNFL*LLTTLKTSSRGVKV
Trigger: CACTTTCACTCCTCTGCTACTAGTCTTCAGTGTTGTTAACAGCAAGAGAAAATTGGGTTTGTTTAAAAATCTACTTCTCTGAGGTGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGTTCAGACAGAAACTTaGCCCATCTCTAGGGATGAT +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEVQTET*PISRDD
Trigger: ATCATCCCTAGAGATGGGGCAAGTTTCTGTCTGAAC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAAGAGGAGTGAAAGTGTaGGTTAAGAGCCTTAAAAAC +
Preference number: 2 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPRGVKV*VKSLKN
Trigger: GTTTTTAAGGCTCTTAACCCACACTTTCACTCCTCT...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAACGAAACGTTGTCTCTaGCCTGTGTCACCTCTTAGT +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQTKRCL*PVSPLS
Trigger: ACTAAGAGGTGACACAGGCCAGAGACAACGTTTCGT...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATTTACATCTTTAAAGTaGGTGGTGGCATGGAGAAGC +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEFTSLK*VVAWRS
Trigger: GCTTCTCCATGCCACCACCCACTTTAAAGATGTAAA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATCTGTATATTCCCATTaGCACAGAAAGGTCATAGTG +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHESVYSH*HRKVIV
Trigger: CACTATGACCTTTCTGTGTCAATGGGAATATACAGA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACTTTCAGGCACATTCTaGGATTCACAACTGTGTTCT +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQLSGTF*DSQLCS
Trigger: AGAACACAGTTGTGAATCTCAGAATGTGCCTGAAAG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACTTCTTTCTTCCCTCTaGAATTCAGGGGTTAAATCC +
Preference number: 2 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQLLSSL*NSGVKS
Trigger: GGATTTAACCCCTGAATTCCAGAGGGAAGAAAGAAG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGCCATCCTACATTACTaGAGTCTCCAATTCTTAAGT +
Preference number: 2 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEAILHY*SLQFLS
Trigger: ACTTAAGAATTGGAGACTCCAGTAATGTAGGATGGC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp CCGAAACACCCTTTCCTCAGGTGGCCGAGCTGCGCCTaGGGAAGGCCCCCACTGAGGCTGTGCCCGAGGAAC +
Preference number: 3 (lower is better)
Translates to: PKHPFLRWPSCA*GRPPLRLCPRN
Trigger: GTTCCTCGGGCACAGCCTCAGTGGGGGCCTTCCCCAGGCGCAGCTCGGCCACCTGAGGAAAGGGTGTTTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp TGTGTGGCTGCGCCTCCGAAACACCCTTTCCTCAGGTaGCCGAGCTGCGCCTGGGGAAGGCCCCCACTGAGG +
Preference number: 3 (lower is better)
Translates to: CVAAPPKHPFLR*PSCAWGRPPLR
Trigger: CCTCAGTGGGGGCCTTCCCCAGGCGCAGCTCGGCCACCTGAGGAAAGGGTGTTTCGGAGGCGCAGCCACACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp AGACCCGGGAGGCTGTGGACAGCGCGTCCTCTGAAATaGTGGTCTCCACACCTGCCTGGGGCTGGGGCACCA +
Preference number: 3 (lower is better)
Translates to: RPGRLWTARPLK*WSPHLPGAGAP
Trigger: TGGTGCCCCAGCCCCAGGCAGGTGTGGAGACCAGCATTTCAGAGGACGCGCTGTCCACAGCCTCCCGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp ATGGGCGTGACCGTGAGGCTGCCAGCGCTGTGTGTGTaGCTGCGCCTCCGAAACACCCTTTCCTCAGGTGGC +
Preference number: 3 (lower is better)
Translates to: MGVTVRLPALCV*LRLRNTLSSGG
Trigger: GCCACCTGAGGAAAGGGTGTTTCGGAGGCGCAGCCACACACACAGCGCTGGCAGCCTCACGGTCACGCCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp GGGAGAGACCTGTGGCAGGGAGGAATGCAGACGCCCTaGTGGCCTGTCTCTGACCCCTCACATGCTGCACTC +
Preference number: 3 (lower is better)
Translates to: GRDLWQGGMQTP*WPVSDPSHAAL
Trigger: GAGTGCAGCATGTGAGGGGTCAGAGACAGGCCAGCAGGGCGTCTGCATTCCTCCCTGCCACAGGTCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp GAGAGAGGGCCCAGCCCTGTGCAGCACAAGGCTCCCTaGTCAGTGTGGCACCAGTTGGGCAGCCGTCAACAT +
Preference number: 3 (lower is better)
Translates to: ERGPSPVQHKAP*SVWHQLGSRQH
Trigger: ATGTTGACGGCTGCCCAACTGGTGCCACACTGAGCAGGGAGCCTTGTGCTGCACAGGGCTGGGCCCTCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp CTTCCAGCTCAGAGGGCAGCGCACTGTCTCCACCCCTaGCCAATGATCCACTCAGACCCGGGAGGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: LPAQRAAHCLHP*PMIHSDPGGCG
Trigger: TCCACAGCCTCCCGGGTCTGAGTGGATCATTGGGCAGGGGTGGAGACAGTGCGCTGCCCTCTGAGCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp GCAGCCCTGGGCTTGTGCACACGGCTGGATGTCAGATaGGTCCGTCCAGGCACTCCTGGCTGCAGTCATGGT +
Preference number: 3 (lower is better)
Translates to: AALGLCTRLDVR*VRPGTPGCSHG
Trigger: ACCATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGTGTGCACAAGCCCAGGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR CCA 72 bp AGCAGCAGCTCAGCTGGTCAGGCTTTCTTGAGACACTaGCCTGACAGTGGATGGCCCACCCTACCCCGGGGC +
Preference number: 3 (lower is better)
Translates to: SSSSAGQAFLRH*PDSGWPTLPRG
Trigger: GCCCCGGGGTAGGGTGGGCCATCCACTGTCAGGCCAGTGTCTCAAGAAAGCCTGACCAGCTGAGCTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAACGGCCCTTCTGCACATaGGGGGCGGGGCCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: AAEQPAVAAVQGRTAISERPFCT*GAGPEL
Trigger: GAGCTCTGGCCCCGCCCCCAATGTGCAGAAGGGCCG...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp CAGCTCAGCTGGTCAGGCTTTCTTGAGACACTGGCCTaGCAGTGGATGGCCCACCCTACCCCGGGGCTCTAC +
Preference number: 3 (lower is better)
Translates to: QLSWSGFLETLA*QWMAHPTPGLY
Trigger: GTAGAGCCCCGGGGTAGGGTGGGCCATCCACTGTCAGGCCAGTGTCTCAAGAAAGCCTGACCAGCTGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp CCCCTGCCCAATGATCCACTCAGACCCGGGAGGCTGTaGACAGCGCGTCCTCTGAAATGCTGGTCTCCACAC +
Preference number: 3 (lower is better)
Translates to: PLPNDPLRPGRL*TARPLKCWSPH
Trigger: GTGTGGAGACCAGCATTTCAGAGGACGCGCTGTCCACAGCCTCCCGGGTCTGAGTGGATCATTGGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp CTGAAGGCAGATGATCCTGTCTCCAAGCATGGACTCTaGCCAGAACCCCCTGGAGGGCAGAAGGCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: LKADDPVSKHGL*PEPPGGQKAGS
Trigger: GCTCCCTGCCTTCTGCCCTCCAGGGGGTTCTGGCCAGAGTCCATGCTTGGAGACAGGATCATCTGCCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp ACGGCTGGATGTCAGATGCGTCCGTCCAGGCACTCCTaGCTGCAGTCATGGTCTCAGCTGTGGAGATGCCCT +
Preference number: 3 (lower is better)
Translates to: TAGCQMRPSRHS*LQSWSQLWRCP
Trigger: AGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR TCA 72 bp CAGACTTCCTTGACCCAGATGGTGGCTGTCCCTGTATaGGGGCTCTTCAGAAACGCCAGGACAGGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: QTSLTQMVAVPV*GLFRNARTGPG
Trigger: CCCTGGGCCTGTCCTGGCGTTTCTGAAGAGCCCTCATACAGGGACAGCCACCATCTGGGTCAAGGAAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp AGCGGCTCTTCAAACTGTGAAGATCCCTGGAGGTCATaGTTCAGGGGCCACCTCGGGTGTAGGATGGGGCAG +
Preference number: 3 (lower is better)
Translates to: SGSSNCEDPWRS*FRGHLGCRMGQ
Trigger: CTGCCCCATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTCACAGTTTGAAGAGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395806.5
3UTR GCA 72 bp GAAGAGCCCCCTCTAAGGGGTGGCTGCAGAACAACCTaGCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTC +
Preference number: 3 (lower is better)
Translates to: EEPPLRGGCRTT*RSCCARKNGHL
Trigger: GAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCACCCCTTAGAGGGGGCTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp CACTCCTGGCTGCAGTCATGGTCTCAGCTGTGGAGATaGCCTTATTCTCCTGGGTGCTGCCATGTCGAGGGC +
Preference number: 3 (lower is better)
Translates to: HSWLQSWSQLWR*PYSPGCCHVEG
Trigger: GCCCTCGACATGGCAGCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR CCA 72 bp AGAGACCTGTGGCAGGGAGGAATGCAGACGCCCTGCTaGCCTGTCTCTGACCCCTCACATGCTGCACTCATA +
Preference number: 3 (lower is better)
Translates to: RDLWQGGMQTPC*PVSDPSHAALI
Trigger: TATGAGTGCAGCATGTGAGGGGTCAGAGACAGGCCAGCAGGGCGTCTGCATTCCTCCCTGCCACAGGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp GAGGCTGTGCCCGAGGAACATGCCGTGTCCACCCCTTaGGACTTGGACGTCCTCTCAGGCCATCCTACATTA +
Preference number: 3 (lower is better)
Translates to: EAVPEEHAVSTP*DLDVLSGHPTL
Trigger: TAATGTAGGATGGCCTGAGAGGACGTCCAAGTCCCAAGGGGTGGACACGGCATGTTCCTCGGGCACAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATCAGTGTGGCACCAGTaGGGCAGCCGTCAACATCTG +
Preference number: 3 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISSVWHQ*GSRQHL
Trigger: CAGATGTTGACGGCTGCCCAACTGGTGCCACACTGA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp GCACTCCAGGTCCCTGTCTGTCCTGGAGCATTCGTGTaGCCCAGCAGTGTCCTGGAGACAACAATGAGGCTG +
Preference number: 3 (lower is better)
Translates to: ALQVPVCPGAFV*PSSVLETTMRL
Trigger: CAGCCTCATTGTTGTCTCCAGGACACTGCTGGGTCACACGAATGCTCCAGGACAGACAGGGACCTGGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp CGCGCTGAGCGGGCTAGGAACCTCTCTAGAGAAGAATaGTGGAGGGCAGGAAAGCCCAGGAAGGTGAAAGGT +
Preference number: 3 (lower is better)
Translates to: RAERARNLSREE*WRAGKPRKVKG
Trigger: ACCTTTCACCTTCCTGGGCTTTCCTGCCCTCCAGCATTCTTCTCTAGAGAGGTTCCTAGCCCGCTCAGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp TCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTaGTATTACCTACTGGAGACGCTCGCGCTGAGCGGG +
Preference number: 3 (lower is better)
Translates to: SKPEVRGKPTFS*YYLLETLALSG
Trigger: CCCGCTCAGCGCGAGCGTCTCCAGTAGGTAATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp GTCATCCTTTCTCGCCTGGTTCACTCCATCGCAGGATaGAGCCCACCAGCAGGGAACCCAGACTTCCTTGAC +
Preference number: 3 (lower is better)
Translates to: VILSRLVHSIAG*SPPAGNPDFLD
Trigger: GTCAAGGAAGTCTGGGTTCCCTGCTGGTGGGCTCCATCCTGCGATGGAGTGAACCAGGCGAGAAAGGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp GGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTaGCTGCCAACAGGGACCCCACACAGGGTGGCCTTG +
Preference number: 3 (lower is better)
Translates to: GGQTGLLVCVGT*LPTGTPHRVAL
Trigger: CAAGGCCACCCTGTGTGGGGTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp GCTGAGCGGGCTAGGAACCTCTCTAGAGAAGAATGCTaGAGGGCAGGAAAGCCCAGGAAGGTGAAAGGTGCG +
Preference number: 3 (lower is better)
Translates to: AERARNLSREEC*RAGKPRKVKGA
Trigger: CGCACCTTTCACCTTCCTGGGCTTTCCTGCCCTCCAGCATTCTTCTCTAGAGAGGTTCCTAGCCCGCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp TGCCCGAGGAACATGCCGTGTCCACCCCTTGGGACTTaGACGTCCTCTCAGGCCATCCTACATTACTGGAGT +
Preference number: 3 (lower is better)
Translates to: CPRNMPCPPLGT*TSSQAILHYWS
Trigger: ACTCCAGTAATGTAGGATGGCCTGAGAGGACGTCCAAGTCCCAAGGGGTGGACACGGCATGTTCCTCGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp TGTCCACTGCATCACCCACTTAGCACAGGCCCATTATaGCTCCCTGAAGCACAGGCTTCCAGCTCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: CPLHHPLSTGPL*LPEAQASSSEG
Trigger: GCCCTCTGAGCTGGAAGCCTGTGCTTCAGGGAGTCATAATGGGCCTGTGCTAAGTGGGTGATGCAGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp CCTCTAAGGGGTGGCTGCAGAACAACCTGCCGTAGCTaGTGTGCAAGGAAGAACGGCCATCTCAGAACGTTC +
Preference number: 3 (lower is better)
Translates to: PLRGGCRTTCRS*CARKNGHLRTF
Trigger: GAACGTTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCACCCCTTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp CTGGATGTCAGATGCGTCCGTCCAGGCACTCCTGGCTaGAGTCATGGTCTCAGCTGTGGAGATGCCCTTATT +
Preference number: 3 (lower is better)
Translates to: LDVRCVRPGTPG*SHGLSCGDALI
Trigger: AATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR CCA 72 bp CCAGCTTGCAGGGAAGGGGAAACGAAACGTTGTCTCTaGCCTGTGTCACCTCTTAGTGCTCCAACAGGGACC +
Preference number: 3 (lower is better)
Translates to: PACREGETKRCL*PVSPLSAPTGT
Trigger: GGTCCCTGTTGGAGCACTAAGAGGTGACACAGGCCAGAGACAACGTTTCGTTTCCCCTTCCCTGCAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp GTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTaGGTGCTGCCATGTCGAGGGCCCTACAGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: VMVSAVEMPLFS*VLPCRGPYSLL
Trigger: AAGCAAGCTGTAGGGCCCTCGACATGGCAGCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR GCA 72 bp TGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTGGGTaGTGCCATGTCGAGGGCCCTACAGCTTGCTTTCAA +
Preference number: 3 (lower is better)
Translates to: WSQLWRCPYSPG*CHVEGPTACFQ
Trigger: TTGAAAGCAAGCTGTAGGGCCCTCGACATGGCAGCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR CCA 72 bp GAGTATATCAGCGGCTCTTCAAACTGTGAAGATCCCTaGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGG +
Preference number: 3 (lower is better)
Translates to: EYISGSSNCEDP*RSCFRGHLGCR
Trigger: CCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTCACAGTTTGAAGAGCCGCTGATATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395806.5
3UTR CCA 72 bp GTTCTTGCTGGGCCTTCCAACTCACTAAGCAGGCTGTaGGGCCTTGCTCTCCATGCTCTTCTGCCTTCATAC +
Preference number: 3 (lower is better)
Translates to: VLAGPSNSLSRL*GLALHALLPSY
Trigger: GTATGAAGGCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTGCTTAGTGAGTTGGAAGGCCCAGCAAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTGGAACCCAGACTTCCTaGACCCAGATGGTGGCTGTC +
Preference number: 3 (lower is better)
Translates to: INLQIRDTATSSRPGMSTGTQTS*TQMVAV
Trigger: GACAGCCACCATCTGGGTCAAGGAAGTCTGGGTTCC...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAAACAGGATTACTTGTTaGTGTAGGGACCTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISNRITC*CRDLAA
Trigger: GGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTT...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp CTGCAGTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTGGGTGCTGCCATCGAGGGCCCTACAGCTaGCTTTCAAATGGTTCAGCA +
Preference number: 3 (lower is better)
Translates to: LQSWSQLWRCPYSPGCCHRGPYS*LSNGSA
Trigger: TGCTGAACCATTTGAAAGCAAGCTGTAGGGCCCTCG...ATGGCAGCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
3UTR TCA 72 bp GAGAAGAGAGCACCTAAACCTGGGTCTGAAAACACATaGAAACTCCAGGCCTTGCTCCCGGCCCTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: EKRAPKPGSENT*KLQALLPALLH
Trigger: GTGCAGAAGGGCCGGGAGCAAGGCCTGGAGTTTTCATGTGTTTTCAGACCCAGGTTTAGGTGCTCTCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp GTGCAGGCGTGCACACAAGGTAATTACCCACAAGCCTaGAGAAACTCACACGAGCACAACTGCCTCGCTTTC +
Preference number: 3 (lower is better)
Translates to: VQACTQGNYPQA*RNSHEHNCLAF
Trigger: GAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAATTACCTTGTGTGCACGCCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp TGGGCCTTCCAACTCACTAAGCAGGCTGTGGGGCCTTaGTCTCCATGCTCTTCTGCCTTCATACTTGCTGAA +
Preference number: 3 (lower is better)
Translates to: WAFQLTKQAVGP*SPCSSAFILAE
Trigger: TTCAGCAAGTATGAAGGCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTGCTTAGTGAGTTGGAAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp CAGCTGAAAGGAGAAAACACAGGGCTGATCCCAGCTTaGAGGGAAGGGGAAACGAAACGTTGTCTCTGGCCT +
Preference number: 3 (lower is better)
Translates to: QLKGENTGLIPA*REGETKRCLWP
Trigger: AGGCCAGAGACAACGTTTCGTTTCCCCTTCCCTGCAAGCTGGGATCAGCCCTGTGTTTTCTCCTTTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp CAGGAGCTCTTAGCAAAGCAGCCTCAGTCCGTTTCCTaGCAATACCCTACACTAAACCAGCCTCTGGGGAGA +
Preference number: 3 (lower is better)
Translates to: QELLAKQPQSVS*QYPTLNQPLGR
Trigger: TCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGGCTGCTTTGCTAAGAGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp GCCTACAGCACGGTATTACTAGCCTTCAGCTCAGGCTaGTTCTTAACTGCCCATCAGCTGTGGACACATGCC +
Preference number: 3 (lower is better)
Translates to: AYSTVLLAFSSG*FLTAHQLWTHA
Trigger: GGCATGTGTCCACAGCTGATGGGCAGTTAAGAACCAGCCTGAGCTGAAGGCTAGTAATACCGTGCTGTAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAAAGGAAGAAGTGTGCTaGTATATGGCACCTCCAAGC +
Preference number: 3 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISKEEVC*YMAPPS
Trigger: GCTTGGAGGTGCCATATACAAGCACACTTCTTCCTT...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp AGAACTGCTGGAATCACAAGCTGCGGCAGAGGTGACTaGAGCATTTCCACTCCGTTCACATATAGCGCCCCA +
Preference number: 3 (lower is better)
Translates to: RTAGITSCGRGD*SISTPFTYSAP
Trigger: TGGGGCGCTATATGTGAACGGAGTGGAAATGCTTCAGTCACCTCTGCCGCAGCTTGTGATTCCAGCAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTGGAACCCAGACTTCCTaGACCCAGATGGTGGCTGTC +
Preference number: 3 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLGTQTS*TQMVAV
Trigger: GACAGCCACCATCTGGGTCAAGGAAGTCTGGGTTCC...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATGCTCCACTGATGGCCTaGCTCATGACTTCATCTAGA +
Preference number: 3 (lower is better)
Translates to: ITHKPAETHTSTTASLSHAPLMA*LMTSSR
Trigger: TCTAGATGAAGTCATGAGCAAGGCCATCAGTGGAGC...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGAAGAGCCTTAAAAACTaGTGGAAAGGGCTCGATGCC +
Preference number: 3 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQKSLKN*WKGLDA
Trigger: GGCATCGAGCCCTTTCCACAAGTTTTTAAGGCTCTT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAATCAAATGCTCTTTaGTCCTATGGGCAAACTTGC +
Preference number: 3 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISESNAL*SYGQTC
Trigger: GCAAGTTTGCCCATAGGACAAAAGAGCATTTGATTC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp TACCCACAAGCCTGCAGAAACTCACACGAGCACAACTaGCTCGCTTTCCCATTCATATGTGTGGCACAGCTT +
Preference number: 3 (lower is better)
Translates to: YPQACRNSHEHN*LAFPFICVAQL
Trigger: AAGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp GACCAGCAGAAAGTGACTATTCTGCACGTGCAGGCGTaGACACAAGGTAATTACCCACAAGCCTGCAGAAAC +
Preference number: 3 (lower is better)
Translates to: DQQKVTILHVQA*TQGNYPQACRN
Trigger: GTTTCTGCAGGCTTGTGGGTAATTACCTTGTGTGCACGCCTGCACGTGCAGAATAGTCACTTTCTGCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp ACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTaGCACAGCTTACTGGCTGGTGCTAGCATACTACAC +
Preference number: 3 (lower is better)
Translates to: TSTTASLSHSYV*HSLLAGASILH
Trigger: GTGTAGTATGCTAGCACCAGCCAGTAAGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACGGCCCTTCTGCACATaGGGGGCGGGGCCAGAGCTC +
Preference number: 3 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQRPFCT*GAGPEL
Trigger: GAGCTCTGGCCCCGCCCCCAATGTGCAGAAGGGCCG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAGGGCTGATCCCAGCTaGCAGGGAAGGGGAAACGAA +
Preference number: 3 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRRADPS*QGRGNE
Trigger: TTCGTTTCCCCTTCCCTGCAAGCTGGGATCAGCCCT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp GCAAGTATTAGAGTATATCAGCGGCTCTTCAAACTGTaGAGATCCCTGGAGGTCATGCTTCAGGGGCCACCT +
Preference number: 3 (lower is better)
Translates to: ASIRVYQRLFKL*RSLEVMLQGPP
Trigger: AGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTCACAGTTTGAAGAGCCGCTGATATACTCTAATACTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395806.5
3UTR TCA 72 bp AGAACGGCCATCTCAGAACGTTCTGTTGCTTGGCATTaGGAACAGTGGTGGCCTTCACCTTTCGATGTGAAG +
Preference number: 3 (lower is better)
Translates to: RTAISERSVAWH*EQWWPSPFDVK
Trigger: CTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAACGTTCTGAGATGGCCGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp TGTGCAAGGAAGAACGGCCATCTCAGAACGTTCTGTTaGTTGGCATTGAGAACAGTGGTGGCCTTCACCTTT +
Preference number: 3 (lower is better)
Translates to: CARKNGHLRTFC*LALRTVVAFTF
Trigger: AAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAACGTTCTGAGATGGCCGTTCTTCCTTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp AAGGACTCGGACCCAAGACGTGTTCAGACAGAAACTTaGCCCATCTCTAGGGATGATCTAGTGTTGAGCTAC +
Preference number: 3 (lower is better)
Translates to: KDSDPRRVQTET*PISRDDLVLSY
Trigger: GTAGCTCAACACTAGATCATCCCTAGAGATGGGGCAAGTTTCTGTCTGAACACGTCTTGGGTCCGAGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAGGGGAAACGAAACGTaGTCTCTGGCCTGTGTCACC +
Preference number: 3 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRRGNET*SLACVT
Trigger: GGTGACACAGGCCAGAGACAACGTTTCGTTTCCCCT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp CTAAGTGCGAACTGTCTTAGAACTTACCCAAGTCAGTaGATGAGTAGCTGGGAGAAAGGGGTATGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: LSANCLRTYPSQ*MSSWEKGVCGQ
Trigger: CTGGCCACATACCCCTTTCTCCCAGCTACTCATTCACTGACTTGGGTAAGTTCTAAGACAGTTCGCACTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp AGGAAGAAGTGTGCTTGTATATGGCACCTCCAAGCCTaGAGTCCGTGGAAAACCCACGTTCAGCTGCTATTA +
Preference number: 3 (lower is better)
Translates to: RKKCACIWHLQA*SPWKTHVQLLL
Trigger: TAATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATACAAGCACACTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp CAAGCTGCTTCTTTTCATCATGTGACAGAACGTTTGTaGGAACTGCTGGAATCACAAGCTGCGGCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: QAASFHHVTERL*ELLESQAAAEV
Trigger: CACCTCTGCCGCAGCTTGTGATTCCAGCAGTTCTCACAAACGTTCTGTCACATGATGAAAAGAAGCAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp AAACATTTCCTTATAATGCTGGGCGGGCTTCAACGGTaGAGTCAACCCTGTTCTCCCCATCTTAAAAAGGGG +
Preference number: 3 (lower is better)
Translates to: KHFLIMLGGLQR*SQPCSPHLKKG
Trigger: CCCCTTTTTAAGATGGGGAGAACAGGGTTGACTGCACCGTTGAAGCCCGCCCAGCATTATAAGGAAATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp AAACCTGGGCTGCAGGTCAACAATCTCGAGCAGTTATaGAAAGACCAGGGTTACTGGAGACCAAGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: KPGLQVNNLEQL*KDQGYWRPRKE
Trigger: TTCCTTTCTTGGTCTCCAGTAACCCTGGTCTTTTCATAACTGCTCGAGATTGTTGACCTGCAGCCCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp GTCTTGAAGGTTCTCAGAAACTGCACATTTAGACCCTaGTCCCAGAACTGTGCCTTCAACCAAGTCTCCCTA +
Preference number: 3 (lower is better)
Translates to: VLKVLRNCTFRP*SQNCAFNQVSL
Trigger: TAGGGAGACTTGGTTGAAGGCACAGTTCTGGGATCAGGGTCTAAATGTGCAGTTTCTGAGAACCTTCAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR GCA 72 bp AACCTAGGGAGGCGGTACTCATTCAGCCCTTTCTTCTaGACACAGCTTTTAGTCTGTTTGTTAAGCGTTACC +
Preference number: 3 (lower is better)
Translates to: NLGRRYSFSPFF*TQLLVCLLSVT
Trigger: GGTAACGCTTAACAAACAGACTAAAAGCTGTGTGCAGAAGAAAGGGCTGAATGAGTACCGCCTCCCTAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp CCACTGATGGCCTTGCTCATGACTTCATCTAGAAACTaGGCAACAGGATTTCTAGATTTCAACGCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: PLMALLMTSSRN*ATGFLDFNAQS
Trigger: GCTTTGGGCGTTGAAATCTAGAAATCCTGTTGCTCAGTTTCTAGATGAAGTCATGAGCAAGGCCATCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp AGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTaGCACAGAAAGGTCATAGTGCATTTCTCAAAGCAC +
Preference number: 3 (lower is better)
Translates to: SGVPNVPSVYSH*HRKVIVHFSKH
Trigger: GTGCTTTGAGAAATGCACTATGACCTTTCTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp CAAGTCCTTTTAGAAAGTGGGCTCTTTTGCCAGCACTaGGAACCTTCGCTCACTTCAGCTGAAAGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: QVLLESGLFCQH*EPSLTSAERRK
Trigger: TTTTCTCCTTTCAGCTGAAGTGAGCGAAGGTTCTCAGTGCTGGCAAAAGAGCCCACTTTCTAAAAGGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp ATCAGCTGTGGACACATGCCCTTGCTGAAAGCTGTTTaGCCCAAATGTGTAAACACAAGAACTGTACAAAGG +
Preference number: 3 (lower is better)
Translates to: ISCGHMPLLKAV*PKCVNTRTVQR
Trigger: CCTTTGTACAGTTCTTGTGTTTACACATTTGGGCCAAACAGCTTTCAGCAAGGGCATGTGTCCACAGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAAACCCAATTTTCTCTaGCTGTTAACAACACTGAAG +
Preference number: 3 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLKPNFL*LLTTLK
Trigger: CTTCAGTGTTGTTAACAGCAAGAGAAAATTGGGTTT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCTGAAGTCTATCTATTaGAACTTCTTCCTCATCGGT +
Preference number: 3 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDLKSIY*NFFLIG
Trigger: ACCGATGAGGAAGAAGTTCAAATAGATAGACTTCAG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATGCAGAAACAGGTTCTaGCTGGGCCTTCCAACTCAC +
Preference number: 3 (lower is better)
Translates to: PLGCFLPFINCTLGKPHECRNRF*LGLPTH
Trigger: GTGAGTTGGAAGGCCCAGCAAGAACCTGTTTCTGCA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAAGGGGAAACGAAACGTaGTCTCTGGCCTGTGTCACC +
Preference number: 3 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQRGNET*SLACVT
Trigger: GGTGACACAGGCCAGAGACAACGTTTCGTTTCCCCT...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CCA 72 bp CAACACAAGCATGAATACAAAGTGAAAGCATGTTCTTaGCATGAAAACCATCTACTCACACCCCACCTTGCT +
Preference number: 3 (lower is better)
Translates to: QHKHEYKVKACS*HENHLLTPHLA
Trigger: AGCAAGGTGGGGTGTGAGTAGATGGTTTTCATGCCAAGAACATGCTTTCACTTTGTATTCATGCTTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAAACAGGATTACTTGTTaGTGTAGGGACCTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: PLGCFLPFINCTLGKPHENRITC*CRDLAA
Trigger: GGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCACTGAAGTCTATCTATTaGAACTTCTTCCTCATCGGT +
Preference number: 3 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPLKSIY*NFFLIG
Trigger: ACCGATGAGGAAGAAGTTCAAATAGATAGACTTCAG...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACTTCTGCCTTCATACTaGCTGAATCCGAAGGCAAGA +
Preference number: 3 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQLLPSY*LNPKAR
Trigger: TCTTGCCTTCGGATTCAGCAAGTATGAAGGCAGAAG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp CGGCCTTATCTGTCAGTATTCCTTTCAGGCACATTCTaGGATTCACAACTGTGTTCTTTAAACAGCCAAAAT +
Preference number: 3 (lower is better)
Translates to: RPYLSVFLSGTF*DSQLCSLNSQN
Trigger: ATTTTGGCTGTTTAAAGAACACAGTTGTGAATCTCAGAATGTGCCTGAAAGGAATACTGACAGATAAGGCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp CAGTTGGAATTATACAAGCTGCTTCTTTTCATCATGTaGCAGAACGTTTGTGAGAACTGCTGGAATCACAAG +
Preference number: 3 (lower is better)
Translates to: QLELYKLLLFIM*QNVCENCWNHK
Trigger: CTTGTGATTCCAGCAGTTCTCACAAACGTTCTGTCACATGATGAAAAGAAGCAGCTTGTATAATTCCAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR-3UTR CAA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAACTCCGATGTTACCTCTaGTTCAATAAACCTGCAAAT +
Preference number: 3 (lower is better)
Translates to: PLGCFLPFINCTLGKPHELRCYL*FNKPAN
Trigger: ATTTGCAGGTTTATTGAACAAGAGGTAACATCGGAG...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR TCA 72 bp GCTCTACCAAGAAGAGGCAATAGAGAATTCTTTCAATaGAACAATGTATGGATACAGGGCTATCGTTATTTT +
Preference number: 3 (lower is better)
Translates to: ALPRRGNREFFQ*NNVWIQGYRYF
Trigger: AAAATAACGATAGCCCTGTATCCATACATTGTTTCATTGAAAGAATTCTCTATTGCCTCTTCTTGGTAGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp TGGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGGATGGGGCAGCGGGTGGGGACCTCGGGTGTAGGATaGGGCAGCGGGTGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: WRSCFRGHLGCRMGQRVGTSGVG*GSGWGS
Trigger: TGACCCCCACCCGCTGCCCCATCCTACACCCGAGGT...CCCCACCCGCTGCCCCATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS-3UTR GCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTGCATCCCGAAGCGCTTaGGGCGCTCCTCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPASRSA*GAPPAS
Trigger: GGAGGCGGGAGGAGCGCCGCAAGCGCTTCGGGATGC...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTGGCCCTTCTGCACATTaGGGGCGGGGCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPGPSAH*GRGQSS
Trigger: GGAGCTCTGGCCCCGCCCCCAATGTGCAGAAGGGCC...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTATCAGCCGCTGCGCCTaGTCACTGGCGCCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPISRCA*SLAPSC
Trigger: GCAACTGGGCGCCAGTGAGCAGGCGCAGCGGCTGAT...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACTCAGGTGGCCGAGCTaGGCCTGGGGAAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISLRWPS*AWGRPP
Trigger: TGGGGGCCTTCCCCAGGCGCAGCTCGGCCACCTGAG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGGGGAAGGCCCCCACTaGGGCTGTGCCCGAGGAACA +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISGEGPH*GCARGT
Trigger: TGTTCCTCGGGCACAGCCTCAGTGGGGGCCTTCCCC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGCGCGGCTCCTCTTCTaGTCAGGGTCCGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEARLLF*SGSGSP
Trigger: GGGGGAGCCGGACCCTGAGCAGAAGAGGAGCCGCGC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAATCGCGGACCCGGCCCTaGTCCCGCTTCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKSRTRP*SRFRSP
Trigger: GGGCGACCTGAAGCGGGAGCAGGGCCGGGTCCGCGA...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGCAGCTGGGCCTCGGTaGCCGCCCACTGGTGGTGCA +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEAAGPR*PPTGGA
Trigger: TGCACCACCAGTGGGCGGGCACCGAGGCCCAGCTGC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTCTCAGCTCCTCCTCGTaGATCGTCTGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPLSSSS*IVCSSR
Trigger: CCGGGAGCTGCAGACGATCCACGAGGAGGAGCTGAG...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACTGCAGAAGGGCCAGTaGGGTCCACCCCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISLQKGQ*GPPPGA
Trigger: TGCCCCTGGGGGTGGACCCCACTGGCCCTTCTGCAG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 72 bp AGAACAGCAGCCGTCAAGCAGGCAGCAGCCCTGGGCTaGTGCACACGGCTGGATGTCAGATGCGTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: RTAAVKQAAALG*CTRLDVRCVRP
Trigger: TGGACGGACGCATCTGACATCCAGCCGTGTGCACAAGCCCAGGGCTGCTGCCTGCTTGACGGCTGCTGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATTGCTGCCCGTCTCCTaGGGCACCGACTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISLLPVS*GTDCLS
Trigger: GGAGAGGCAGTCGGTGCCTCAGGAGACGGGCAGCAA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTCTTGAGACACTGGCCTaGCAGTGGATGGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPLETLA*QWMAHP
Trigger: AGGGTGGGCCATCCACTGTCAGGCCAGTGTCTCAAG...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp ATCCCTGGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGGATGGGGCAGCGGGCGGCTCTTCAAACTGTaGAGATCCCTGGAGGTCATG +
Preference number: 4 (lower is better)
Translates to: IPGGHASGATSGVGWGSGRLFKL*RSLEVM
Trigger: CATGACCTCCAGGGATCTTCACAGTTTGAAGAGCCG...CCCGCTGCCCCATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTCGCCTCCGCTCCCGTaGGCGGCTCCTCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSPPLP*AAPLLL
Trigger: GAGCAGAAGAGGAGCCGCGCACGGGAGCGGAGGCGA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACCTCTGGACCTCCTTCTaGCGGTCCCGCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDLWTSF*RSRCSA
Trigger: GGCGCTGCAGCGGGACCGGCAGAAGGAGGTCCAGAG...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAGCTGGGGCCGGCCAGTaGTGCAGGGCTTGGATGGCG +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKAGAGQ*CRAWMA
Trigger: CGCCATCCAAGCCCTGCAGCACTGGCCGGCCCCAGC...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTTGTGGGATGCTTTGCTaGCCGTCTCCTGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPCGMLC*PSPEAP
Trigger: CGGTGCCTCAGGAGACGGGCAGCAAAGCATCCCACA...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTCAGGCTGTGGGGCCTTaGTCTCCATGCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPQAVGP*SPCSSA
Trigger: GGCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTG...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp ACTGTGAAGATCCCTGGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGGATGGGATCCCTGGAGGTCATaGTTCAGGGGCCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: TVKIPGGHASGATSGVGWDPWRS*FRGHLG
Trigger: CCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATC...CCATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS-3UTR GCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTACCTCCTCCGCTCGTTaGCAAACAGACGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPTSSAR*QTDGPP
Trigger: AGGTGGCCCGTCTGTTTGGCAACGAGCGGAGGAGGT...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GCAGGCAGCAGCCCTGGGCTTGTGCACACGGCTGGATGTCAGATGCGTCCGTCCTCTCAGCTGTGGAGATaGCCTTATTCTCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGSSPGLVHTAGCQMRPSSQLWR*PYSPGC
Trigger: GCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGA...GGACGGACGCATCTGACATCCAGCCGTGTGCACAAGCCCAGGGCTGCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTGTGTGCTCTCGGTCCTaGTCAGCTGCTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPVCSRS*SAAPPH
Trigger: GTGTGGTGGAGCAGCTGACCAGGACCGAGAGCACAC...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAGGGCTGGCAGGGCCTTaGGGTGTGGCCCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKGLAGP*GVAPGG
Trigger: TCCACCAGGGGCCACACCCCAAGGCCCTGCCAGCCC...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTTCCAAGCATGGACTCTaGCCAGAACCCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPSKHGL*PEPPGG
Trigger: CCCTCCAGGGGGTTCTGGCCAGAGTCCATGCTTGGA...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTGGCCTGACAGTGGATaGCCCACCCTACCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDWPDSG*PTLPRG
Trigger: GCCCCGGGGTAGGGTGGGCCATCCACTGTCAGGCCA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTCGCCTTCTCTCCACCTaGAAGGCTTCTCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPRLLST*KASRWL
Trigger: CAGCCACCGAGAAGCCTTCCAGGTGGAGAGAAGGCG...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCGCGGCCGCTGCAAATaGGACCGGAGCGCCTCACGC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDRGRCK*DRSASR
Trigger: GCGTGAGGCGCTCCGGTCCCATTTGCAGCGGCCGCG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
3UTR CAA 72 bp GTGCAGCACAAGGCTCCCTGCTCAGTGTGGCACCAGTaGGGCAGCCGTCAACATCTGTGCCAGTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VQHKAPCSVWHQ*GSRQHLCQCCH
Trigger: GTGGCAACACTGGCACAGATGTTGACGGCTGCCCAACTGGTGCCACACTGAGCAGGGAGCCTTGTGCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACCGCCCAGTTGCTGGCTaGGGTCGGCAATGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDRPVAG*GRQCAP
Trigger: AGGAGCGCATTGCCGACCTCAGCCAGCAACTGGGCG...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATCCACCCCTGCCCAATaGTCCACTCAGACCCGGGAG +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISSTPAQ*STQTRE
Trigger: CTCCCGGGTCTGAGTGGATCATTGGGCAGGGGTGGA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTGCGCGGCTCCTCTTCTaGTCAGGGTCCGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTARLLF*SGSGSP
Trigger: GGGGGAGCCGGACCCTGAGCAGAAGAGGAGCCGCGC...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACCCCGCCCACTGGTGGTaGAGTGCGAGCAGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDPAHWW*SASSAS
Trigger: TGAGGCACTGCTCGCACTGCACCACCAGTGGGCGGG...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTTCGGTCCTGGTCAGCTaGTCCACCACACACCGAATC +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPSVLVS*STTHRI
Trigger: GATTCGGTGTGTGGTGGAGCAGCTGACCAGGACCGA...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGTGCTCCCGGCCCTTCTaGACATTGGGGGCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQCSRPF*TLGAGP
Trigger: TGGCCCCGCCCCCAATGTGCAGAAGGGCCGGGAGCA...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATGTGGCAGGGAGGAATaGAGACGCCCTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISCGREE*RRPAGL
Trigger: CAGGCCAGCAGGGCGTCTGCATTCCTCCCTGCCACA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCTCAGGTGGCCGAGCTaGGCCTGGGGAAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPLRWPS*AWGRPP
Trigger: TGGGGGCCTTCCCCAGGCGCAGCTCGGCCACCTGAG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACCCCCGCAGGGTCTCCTaGATGCTCTGTAGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDPRRVS*MLCSLR
Trigger: CCGCAGGCTACAGAGCATCCAGGAGACCCTGCGGGG...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAACCCTCGCTCGCACGTaGCCTGCAGCACGTAGCCCT +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISETLART*PAARSP
Trigger: AGGGCTACGTGCTGCAGGCCACGTGCGAGCGAGGGT...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395811.9
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACTGCAGAAGGGCCAGTaGGGTCCACCCCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKLQKGQ*GPPPGA
Trigger: TGCCCCTGGGGGTGGACCCCACTGGCCCTTCTGCAG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACCACCCTTTCCTCAGGTaGCCGAGCTGCGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDHPFLR*PSCAWG
Trigger: TCCCCAGGCGCAGCTCGGCCACCTGAGGAAAGGGTG...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAATGGCCTGACAGTGGATaGCCCACCCTACCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKWPDSG*PTLPRG
Trigger: GCCCCGGGGTAGGGTGGGCCATCCACTGTCAGGCCA...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATCCCTGGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGGATGGGGCAGCGGGTTCATTTCAAGGGGGTaGGTGTTTTGCTGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: IPGGHASGATSGVGWGSGFISRG*VFCCVR
Trigger: CCTGACGCAGCAAAACACCCACCCCCTTGAAATGAA...CCCGCTGCCCCATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS-3UTR CCA 90 bp CACACGGCTGGATGTCAGATGCGTCCGTCCAGGCACTCCTGGCTGCAGTCATGGATGCCCTTATTCTCCTaGGTGCTGCCATGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: HTAGCQMRPSRHSWLQSWMPLFS*VLPCRG
Trigger: CCCTCGACATGGCAGCACCCAGGAGAATAAGGGCAT...CCATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR CCA 90 bp TCAGATGCGTCCGTCCAGGCACTCCTGGCTGCAGTCATGGTCTCAGCTGTGGAGGCTTGTGCACACGGCTaGATGTCAGATGCGTCCGTC +
Preference number: 4 (lower is better)
Translates to: SDASVQALLAAVMVSAVEACAHG*MSDASV
Trigger: GACGGACGCATCTGACATCCAGCCGTGTGCACAAGC...CTCCACAGCTGAGACCATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTCAGCGGCCGCATTGCTaGGCCGTGCCTGAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTQRPHC*AVPEGS
Trigger: GGAGCCTTCAGGCACGGCTCAGCAATGCGGCCGCTG...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCCTGGAACCGCTGTCTaGGGAGGTCCCGCTCGTCAC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDPGTAV*GGPARH
Trigger: GTGACGAGCGGGACCTCCTCAGACAGCGGTTCCAGG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTCCAGACACTGCTGCTaGTGGTCTAGCTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSRHCC*WSSWAA
Trigger: GGCCGCCCAGCTAGACCATCAGCAGCAGTGTCTGGA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGGGGAAGGCCCCCACTaGGGCTGTGCCCGAGGAACA +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPGEGPH*GCARGT
Trigger: TGTTCCTCGGGCACAGCCTCAGTGGGGGCCTTCCCC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACGCATTGCTGAGCCGTaGCTGAAGGCTCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISRIAEP*LKAPDL
Trigger: GAGATCCGGAGCCTTCAGGCACGGCTCAGCAATGCG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTCGTGCTCTGCGAGCCTaGGCACGCTGGCCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTRALRA*ARWPLV
Trigger: CACGAGAGGCCAGCGTGCGCAGGCTCGCAGAGCACG...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAACTCTCCTGCCTCTCCTaGTCCAGCTGGGAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISELSCLS*SSWEAS
Trigger: ACTGGCCTCCCAGCTGGAGCAGGAGAGGCAGGAGAG...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTACCTGTCTCCAGCTGTaGACGGGCCCCGCCATGGGC +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPTCLQL*TGPAMG
Trigger: GCCCATGGCGGGGCCCGTGCACAGCTGGAGACAGGT...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACGACTGGGAGCACTGCTaGAGGGAGGCAGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDDWEHC*REAGFP
Trigger: TGGGAAGCCTGCCTCCCTGCAGCAGTGCTCCCAGTC...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTGCAGGGCCGTCTGGGTaGCCCGCAGGGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAAGPSG*PAGSPG
Trigger: TCCAGGAGACCCTGCGGGGCACCCAGACGGCCCTGC...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTGGCTCAGGACCCGGCTaGGCTCAGCCTGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTGSGPG*AQPAVC
Trigger: GCACACTGCAGGCTGAGCGCAGCCGGGTCCTGAGCC...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACACACCTAGCGGGCTCTaGTGTGTCCCAGCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDTPSGL*CVPAPW
Trigger: CCACGGAGCTGGGACACAGCAGAGCCCGCTAGGTGT...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp ACTGTGAAGATCCCTGGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGGATGGGGGTGGGTGTTTTGCTaGGTCAGGTCCTCGTCGTTG +
Preference number: 4 (lower is better)
Translates to: TVKIPGGHASGATSGVGWGWVFC*VRSSSL
Trigger: CAACGACGAGGACCTGACGCAGCAAAACACCCACCC...CCATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTCACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS-3UTR GCA 90 bp CACTCCTGGCTGCAGTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTGGGCGGCTGGATGTCAGATaGGTCCGTCCAGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: HSWLQSWSQLWRCPYSPGRLDVR*VRPGTP
Trigger: AGGAGTGCCTGGACGGACGCATCTGACATCCAGCCG...CCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTTCGCTAGCCCTCAGCTaGCTGCTCAGCGCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPSLALS*LLSAAS
Trigger: CGAGGCGGCGCTGAGCAGCCAGCTGAGGGCTAGCGA...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCGAGCCTGCGCACGCTaGCCTCTCGTGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYRACAR*PLVPPA
Trigger: AGCTGGAGGCACGAGAGGCCAGCGTGCGCAGGCTCG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAACATCCTCGTCGGACGTaGCCACGCGCTCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEHPRRT*PRALSA
Trigger: AGCTGACAGAGCGCGTGGCCACGTCCGACGAGGATG...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAACACCAGGTGCCCCTTaGTCGAGTTTGGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISTPGAP*SSLAVP
Trigger: GGGCACAGCCAAACTCGACCAAGGGGCACCTGGTGT...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGTGCACTCTCCACACTaGCCAGGGAGGCTGCGCGTG +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDVHSPH*PGRLRV
Trigger: CACGCGCAGCCTCCCTGGCCAGTGTGGAGAGTGCAC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACCCTCAGCCCCGTCATaGAGTCAGCCTCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKPSAPS*SQPLPG
Trigger: CCCAGGGAGAGGCTGACTCCATGACGGGGCTGAGGG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTTCTTCATGGCTTCGATaGCTGAGATGGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPSSWLR*LRWWPL
Trigger: CAGCGGCCACCATCTCAGCCATCGAAGCCATGAAGA...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTGGCCCTTCTGCACATTaGGGGCGGGGCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTGPSAH*GRGQSS
Trigger: GGAGCTCTGGCCCCGCCCCCAATGTGCAGAAGGGCC...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGCCAGGAAGGGCAGGTaGTGGACCTCAGAGAACGGC +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEARKGR*WTSENG
Trigger: GCCGTTCTCTGAGGTCCACCACCTGCCCTTCCTGGC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGCACCCTTTCCTCAGGTaGCCGAGCTGCGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQHPFLR*PSCAWG
Trigger: TCCCCAGGCGCAGCTCGGCCACCTGAGGAAAGGGTG...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTATGCTGCAGACCATTTaGTGGGGGAGTCGAGGACCT +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPMLQTI*WGSRGP
Trigger: AGGTCCTCGACTCCCCCACCAAATGGTCTGCAGCAT...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp TTGTGCACACGGCTGGATGTCAGATGCGTCCGTCCAGGCACTCCTGGCTGCAGTGTGCGTGCACATTGCTaGCTCAGCGTAACCCATCAC +
Preference number: 4 (lower is better)
Translates to: LCTRLDVRCVRPGTPGCSVRAHC*LSVTHH
Trigger: GTGATGGGTTACGCTGAGCCAGCAATGTGCACGCAC...ACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGTGTGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTGCTTCAGGTCGCCCTTaGGCTTGGCCAGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTASGRP*AWPAPA
Trigger: AGCAGGCGCTGGCCAAGCTCAAGGGCGACCTGAAGC...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGTTGGCTGTGCCCTGCTaGTGGCCCTCCCTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQLAVPC*WPSLSS
Trigger: GCTTGACAGGGAGGGCCATCAGCAGGGCACAGCCAA...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGGGCTTGGATGGCGCTaGCGAGTGCACTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDGLGWR*RVHSPH
Trigger: GTGTGGAGAGTGCACTCGTCAGCGCCATCCAAGCCC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAACCTGGAGCATTCGTGTaGCCCAGCAGTGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEPGAFV*PSSVLE
Trigger: CTCCAGGACACTGCTGGGTCACACGAATGCTCCAGG...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGTGGCTGTCCCTGTATaGGGGCTCTTCAGAAACGCC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISVAVPV*GLFRNA
Trigger: GGCGTTTCTGAAGAGCCCTCATACAGGGACAGCCAC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTGCCAAGGAGCAGCCTaGGACCCCGCCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYCQGAA*DPACSC
Trigger: ACAGCTGCAGGCGGGGTCTCAGGCTGCTCCTTGGCA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGTGCCGCTCCTCCAGCTaGTCGCGGACCCGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSECRSSS*SRTRPC
Trigger: GCAGGGCCGGGTCCGCGAGCAGCTGGAGGAGCGGCA...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTCACTGGCGCCCAGTTaGTGGCTGAGGTCGGCAATG +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSLAPS*WLRSAM
Trigger: CATTGCCGACCTCAGCCAGCAACTGGGCGCCAGTGA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTTCCTCCATCAGCCGCTaGGCCTGCTCACTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTASSISR*ACSLAP
Trigger: GGGCGCCAGTGAGCAGGCGCAGCGGCTGATGGAGGA...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATCAGAGGCTCTGCACGTaGTCTGCGAGCCTGCGCACG +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHQRLCT*SASLRT
Trigger: CGTGCGCAGGCTCGCAGAGCACGTGCAGAGCCTCTG...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGGTGCAGTGCGAGCAGTaGCTCACGGCTCTGACCCTG +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQVQCEQ*LTALTL
Trigger: CAGGGTCAGAGCCGTGAGGCACTGCTCGCACTGCAC...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTCGGCTGCGCTCAGCCTaGAGTGTGCTCTCGGTCCTG +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTRLRSA*SVLSVL
Trigger: CAGGACCGAGAGCACACTGCAGGCTGAGCGCAGCCG...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGGGAATGCAGACGCCCTaGTGGCCTGTCTCTGACCCC +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQGMQTP*WPVSDP
Trigger: GGGGTCAGAGACAGGCCAGCAGGGCGTCTGCATTCC...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAGGAATGCAGACGCCCTaGTGGCCTGTCTCTGACCCC +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKGMQTP*WPVSDP
Trigger: GGGGTCAGAGACAGGCCAGCAGGGCGTCTGCATTCC...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTCTGCACGTGCAGGCGTaGACACAAGGTAATTACCCA +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPLHVQA*TQGNYP
Trigger: TGGGTAATTACCTTGTGTGCACGCCTGCACGTGCAG...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGGCGGGCTTCAACGGTaGAGTCAACCCTGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEGGLQR*SQPCSP
Trigger: GGGAGAACAGGGTTGACTGCACCGTTGAAGCCCGCC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACCCCCACTGAGGCTGTaGCCGAGGAACATGCCGTGT +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKPPLRL*PRNMPC
Trigger: ACACGGCATGTTCCTCGGGCACAGCCTCAGTGGGGG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCCCAGTCAAAGGTCTTaGAGCGGCCCTCTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDPSQRS*SGPLAS
Trigger: GGAGGCGAGAGGGCCGCTCCAAGACCTTTGACTGGG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTGTGCCCGCCCACTGGTaGTGCAGTGCGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAVPAHW*CSASSA
Trigger: GGCACTGCTCGCACTGCACCACCAGTGGGCGGGCAC...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACCTCTGGCAACGAGCTaGTCACATCCGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKPLATS*SHPGQW
Trigger: CCACTGCCCCGGATGTGACCAGCTCGTTGCCAGAGG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACATGCAGACGCCCTGCTaGCCTGTCTCTGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDMQTPC*PVSDPS
Trigger: TGAGGGGTCAGAGACAGGCCAGCAGGGCGTCTGCAT...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATGTCTCCACACCTGCCTaGGGCTGGGGCACCATGGGT +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHVSTPA*GWGTMG
Trigger: ACCCATGGTGCCCCAGCCCCAGGCAGGTGTGGAGAC...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGTCTCCACACCTGCCTaGGGCTGGGGCACCATGGGT +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYVSTPA*GWGTMG
Trigger: ACCCATGGTGCCCCAGCCCCAGGCAGGTGTGGAGAC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTGCCTTCAGCTCAGGCTaGTTCTTAACTGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPAFSSG*FLTAHQ
Trigger: CTGATGGGCAGTTAAGAACCAGCCTGAGCTGAAGGC...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGGGCAACTGTACCTGTaGTTGGGGGTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDGQLYL*LGVLGL
Trigger: CAGCCCCAGCACCCCCAACCACAGGTACAGTTGCCC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTGGACCACCGAGCTCCTaGGAGGGCGACTCGGGGCAA +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAGPPSS*EGDSGQ
Trigger: TTGCCCCGAGTCGCCCTCCCAGGAGCTCGGTGGTCC...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CACTCCTGGCTGCAGTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTGGGAGCAGCTTCAGGCCGTaGTGTCTCCCACGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HSWLQSWSQLWRCPYSPGSSFRP*CLPRLC
Trigger: ACACAGACGTGGGAGACACCACGGCCTGAAGCTGCT...CCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTGCTTTCTTCCGAGGGTaGCCGGTCCTGGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTAFFRG*PVLAGV
Trigger: GACACCAGCCAGGACCGGTCACCCTCGGAAGAAAGC...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCTCCTGAGAGCTGTCTaGGTCTCGGCCCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDLLRAV*VSAQDF
Trigger: GAAGTCCTGGGCCGAGACTCAGACAGCTCTCAGGAG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGGGGCGGCCTTGGCCTTaGGCTCTGCATTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQGRPWP*ALHSPF
Trigger: AAAGGGAGAATGCAGAGCTCAAGGCCAAGGCCGCCC...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACACCTGCCCCGCAGGGTaGACATGCTCATGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDTCPAG*TCSCCA
Trigger: AGCACAGCATGAGCATGTTCACCCTGCGGGGCAGGT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATGCGGCAGAGGTGACTaGAGCATTTCCACTCCGTTC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISCGRGD*SISTPF
Trigger: GAACGGAGTGGAAATGCTTCAGTCACCTCTGCCGCA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACTTGAGACACTGGCCTaGCAGTGGATGGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKLETLA*QWMAHP
Trigger: AGGGTGGGCCATCCACTGTCAGGCCAGTGTCTCAAG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAATCGGCAATGCGCTCCTaGAGCCTCTGGACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKSAMRS*SLWTSF
Trigger: GAAGGAGGTCCAGAGGCTGCAGGAGCGCATTGCCGA...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTCCAGCTGGTGCACCTaGTCACTGCCCTCGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSSWCT*SLPSKV
Trigger: CACTTTCGAGGGCAGTGAGCAGGTGCACCAGCTGGA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCCACTGGTGGTGCAGTaGGAGCAGTGCCTCACGGCT +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPPLVVQ*EQCLTA
Trigger: AGCCGTGAGGCACTGCTCGCACTGCACCACCAGTGG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGATGGCGCTGACGAGTaGACTCTCCACACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDDGADE*TLHTGQ
Trigger: CTGGCCAGTGTGGAGAGTGCACTCGTCAGCGCCATC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATGGGGCCGGCCAGTGCTaGAGGGCTTGGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDGAGQC*RAWMAL
Trigger: CAGCGCCATCCAAGCCCTGCAGCACTGGCCGGCCCC...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTAGGCAGGGAGCTGTCTaGAGAAGGGCCAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTRQGAV*RRASGV
Trigger: GACCCCACTGGCCCTTCTGCAGACAGCTCCCTGCCT...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACATCTGTGCCAGTGTTaGCACCTGGGCAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISHLCQC*HLGKSL
Trigger: CAGAGACTTGCCCAGGTGGCAACACTGGCACAGATG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TGCACACGGCTGGATGTCAGATGCGTCCGTCCAGGCACTCCTGGCTGCAGTCATGAGGGCCCTACAGCTTaGTTTCAAATGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CTRLDVRCVRPGTPGCSHEGPTA*FQMVQQ
Trigger: CTGCTGAACCATTTGAAAGCAAGCTGTAGGGCCCTC...ATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR GCA 90 bp AGTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTGGGTGCTGCCATGTCGCCTTATTCTCCTGGGTaGTGCCATGTCGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SHGLSCGDALILLGAAMSPYSPG*CHVEGP
Trigger: AGGGCCCTCGACATGGCAGCACCCAGGAGAATAAGG...CGACATGGCAGCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACACTGCCCTCGAAAGTaGCGCTCAGCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISHCPRK*RSASPS
Trigger: AGAAGGAGAAGCTGAGCGCCACTTTCGAGGGCAGTG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCGCTCTGTCAGCTCCTaGAACCGCTGTCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDRSVSS*NRCLRR
Trigger: CCTCCTCAGACAGCGGTTCCAGGAGCTGACAGAGCG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATGGTGCCCTAGTGGCTTaGACTGGTTGGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHGALVA*TGWPGS
Trigger: GCTCCCAGGCCAACCAGTCCAAGCCACTAGGGCACC...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGCCCCTTGGTCGAGTTTaGCTGTGCCCTGCTGATGGC +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQPLGRV*LCPADG
Trigger: GCCATCAGCAGGGCACAGCCAAACTCGACCAAGGGG...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCCACTAGGACCTTCCTaGCCCAGGTGTCTACGGGGG +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPPLGPS*PRCLRG
Trigger: CCCCCGTAGACACCTGGGCCAGGAAGGTCCTAGTGG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAACTCTGTAGCCTGCGGTaGAACGACTCCCTCACTGAC +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISELCSLR*NDSLTD
Trigger: GTCAGTGAGGGAGTCGTTCCACCGCAGGCTACAGAG...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATACTTCTCACGCAGTGTaGCCGCGTCGCCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHTSHAV*PRRPPG
Trigger: ACCTGGAGGGCGACGCGGCCACACTGCGTGAGAAGT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCCTCTGGCAACGAGCTaGTCACATCCGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYPLATS*SHPGQW
Trigger: CCACTGCCCCGGATGTGACCAGCTCGTTGCCAGAGG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATCACTAAGCAGGCTGTaGGGCCTTGCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISSLSRL*GLALHA
Trigger: AGCATGGAGAGCAAGGCCCCACAGCCTGCTTAGTGA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATGCCCCCTCTAAGGGGTaGCTGCAGAACAACCTGCCG +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHAPSKG*LQNNLP
Trigger: CGGCAGGTTGTTCTGCAGCCACCCCTTAGAGGGGGC...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTGCCCCCTCTAAGGGGTaGCTGCAGAACAACCTGCCG +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTAPSKG*LQNNLP
Trigger: CGGCAGGTTGTTCTGCAGCCACCCCTTAGAGGGGGC...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCCACCCCTTGGGACTTaGACGTCCTCTCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDPPLGT*TSSQAI
Trigger: GATGGCCTGAGAGGACGTCCAAGTCCCAAGGGGTGG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCCAGCGCTGTGTGTGTaGCTGCGCCTCCGAAACACC +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYPALCV*LRLRNT
Trigger: GGTGTTTCGGAGGCGCAGCCACACACACAGCGCTGG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTACCCGAGCGCTGTGCTaGAACCTAGGGAGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTTRALC*NLGRRY
Trigger: GTACCGCCTCCCTAGGTTCCAGCACAGCGCTCGGGT...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGCTTTCTTGAGACACTaGCCTGACAGTGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISAFLRH*PDSGWP
Trigger: GGGCCATCCACTGTCAGGCCAGTGTCTCAAGAAAGC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CGTCCAGGCACTCCTGGCTGCAGTCATGGTCTCAGCTGTGGAGATGCCCTTATTTCCTGGCTGCAGTCATaGTCTCAGCTGTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: RPGTPGCSHGLSCGDALISWLQS*SQLWRC
Trigger: GCATCTCCACAGCTGAGACCATGACTGCAGCCAGGA...AATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTGCCTGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTCATGGCTTCGATGGCTaGGATGGTGGCCGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTHGFDG*DGGRCL
Trigger: GAGACAGCGGCCACCATCTCAGCCATCGAAGCCATG...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCTGCTGGCCTGTCTCTaGCCCCTCACATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPLLACL*PLTCCT
Trigger: AGTGCAGCATGTGAGGGGTCAGAGACAGGCCAGCAG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AACTGTGAAGATCCCTGGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGGATGGGGTGGTCTCATAGCTaGTGCCATTCCTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: NCEDPWRSCFRGHLGCRMGWSHS*CHSSSC
Trigger: ACAGGAAGAGGAATGGCATCAGCTATGAGACCACCC...CATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTCACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS-3UTR GCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATACTCTATGGAGCCTCTaGCAGGCACCCGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHTLWSL*QAPDGE
Trigger: CTCCCCATCGGGTGCCTGGCAGAGGCTCCATAGAGT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTATCTCAGCCTCGTGGTaGCGGATCGTGTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPISASW*RIVSLA
Trigger: GGCCAAGGACACGATCCGGCACCACGAGGCTGAGAT...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGGCACTCTTGAGCTTCTaGTCGCTAGCCCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQALLSF*SLALSW
Trigger: CCAGCTGAGGGCTAGCGAGCAGAAGCTCAAGAGTGC...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTTCTCGTGCCTCCAGCTaGTCCTCCAGCTGGTGCACC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTASRASS*SSSWCT
Trigger: GGTGCACCAGCTGGAGGAGCAGCTGGAGGCACGAGA...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACTCCCATTCTCCTCGGTaGCACCTGTCTCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDSHSPR*HLSPAV
Trigger: CACAGCTGGAGACAGGTGGCACCGAGGAGAATGGGA...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACAGCCTCACCTGCTCCTaGTCTGTCAACTCAGACTGG +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSLTCS*SVNSDW
Trigger: CCAGTCTGAGTTGACAGAGCAGGAGCAGGTGAGGCT...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAACCCAGTGTCCCCAAGTaGTTCCTCAGAGACTCAACC +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEPSVPK*FLRDST
Trigger: GGTTGAGTCTCTGAGGAAGCACTTGGGGACACTGGG...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCCCTGTGGGATGCTTTaGTGCCCGTCTCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYPCGML*CPSPEA
Trigger: TGCCTCAGGAGACGGGCAGCAAAGCATCCCACAGGG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGGGATGCTCTGTAGCCTaGGGTGGAACGACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQGCSVA*GGTTPS
Trigger: TGAGGGAGTCGTTCCACCGCAGGCTACAGAGCATCC...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGCTCAGCCTGCAGTGTaGTCTCGGTCCTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPAQPAV*SRSWSA
Trigger: AGCTGACCAGGACCGAGAGCACACTGCAGGCTGAGC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCCTCGTGGATCGTCTaGAGCTCCCGGACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHSSWIV*SSRTLS
Trigger: GCTCAAGGTCCGGGAGCTGCAGACGATCCACGAGGA...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGCCATAAATGGGTTTTaGCTGCGTCAGGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISAINGF*LRQVLV
Trigger: GACGAGGACCTGACGCAGGCAAAACCCATTTATGGC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGTGGAAAGGGCTCGATaGCAGTGGAGAGCACTTAGT +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISVERAR*QWRALS
Trigger: ACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCAC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTAGGCAGGGAGCTGTCTaGAGAAGGGCCAGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTARQGAV*RRASGV
Trigger: GACCCCACTGGCCCTTCTGCAGACAGCTCCCTGCCT...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACCATCTGTGCCAGTGTTaGCACCTGGGCAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDHLCQC*HLGKSL
Trigger: CAGAGACTTGCCCAGGTGGCAACACTGGCACAGATG...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGGAGCTGGTGGCTGCTaGAGAAACAGGTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEGAGGC*RNRFLL
Trigger: CAGCAAGAACCTGTTTCTGCAGCAGCCACCAGCTCC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTACACCTAGCGGGCTCTaGTGTGTCCCAGCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTATPSGL*CVPAPW
Trigger: CCACGGAGCTGGGACACAGCAGAGCCCGCTAGGTGT...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACTCTCTAGAGAAGAATaGTGGAGGGCAGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISLSREE*WRAGKP
Trigger: GGGCTTTCCTGCCCTCCAGCATTCTTCTCTAGAGAG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGGGCTGCAGAACAACCTaGCGTAGCTGCTGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQGCRTT*RSCCAR
Trigger: CCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCC...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCCTCTAAGGGGTGGCTaGAGAACAACCTGCCGTAGC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDPLRGG*RTTCRS
Trigger: GCTACGGCAGGTTGTTCTGCAGCCACCCCTTAGAGG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAATCCAAACAGCTCCAGTaGTCCACAGAGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKSKQLQ*STEPCP
Trigger: TGGGCAGGGCTCTGTGGAGCACTGGAGCTGTTTGGA...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTCCCAGTCAAAGGTCTTaGAGCGGCCCTCTCGCCTCC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAPSQRS*SGPLAS
Trigger: GGAGGCGAGAGGGCCGCTCCAAGACCTTTGACTGGG...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGCCGGATCGTGTCCTTaGCCTCCCCATAGCTACGCT +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPAGSCP*PPHSYA
Trigger: AGCGTAGCTATGGGGAGGCCAAGGACACGATCCGGC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCGGATCTCAGCCTCGTaGTGCCGGATCGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPRISAS*CRIVSL
Trigger: CAAGGACACGATCCGGCACCACGAGGCTGAGATCCG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGTGACCGGTCCTGGCTaGTGTCGGAAGATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPVTGPG*CRKMCC
Trigger: GCAGCACATCTTCCGACACCAGCCAGGACCGGTCAC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTTCGGTGCCCGCCCACTaGTGGTGCAGTGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLSVPAH*WCSASS
Trigger: ACTGCTCGCACTGCACCACCAGTGGGCGGGCACCGA...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAGCTGCTCACGCAGCTaGGCCTCGGTGCCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRSCSRS*ASVPAH
Trigger: GTGGGCGGGCACCGAGGCCCAGCTGCGTGAGCAGCT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATCAGTGCTGCAGGGCTTaGATGGCGCTGACGAGTGCA +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHQCCRA*MALTSA
Trigger: TGCACTCGTCAGCGCCATCCAAGCCCTGCAGCACTG...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAAGGGAATCTGCTATCTaGCTGATCAGCGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISERESAI*LISEAS
Trigger: GGAGGCCTCGCTGATCAGCCAGATAGCAGATTCCCT...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATCTCCTCTAAGAGGCTaGCCTTCTCCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISSPLRG*PSPSAA
Trigger: AGCAGCTGAAGGAGAAGGCCAGCCTCTTAGAGGAGA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATACCGAGGCATCCAGCTaGCTCAGGACCCGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDTEASS*LRTRLR
Trigger: GCGCAGCCGGGTCCTGAGCCAGCTGGATGCCTCGGT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTTTGGGGTGTGGCCCCTaGTGGAGGCAGAGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLLGCGP*WRQRVS
Trigger: GGACACCCTCTGCCTCCACCAGGGGCCACACCCCAA...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCCTGAGGAAGGGTCGTaGGCATCTCATCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPPEEGS*ASHPGR
Trigger: ACGCCCTGGATGAGATGCCCACGACCCTTCCTCAGG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACAGGGGCAGCAGGGATaGTCACGAAGGAAACCATGC +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKQGQQG*SRRKPC
Trigger: GCATGGTTTCCTTCGTGACCATCCCTGCTGCCCCTG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTGCTCCCTGCTCAGTGTaGCACCAGTTGGGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAAPCSV*HQLGSR
Trigger: ACGGCTGCCCAACTGGTGCCACACTGAGCAGGGAGC...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACTGGGGCACCATGGGTaGATAAAGAAACTGACCAGC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISLGHHG*IKKLTS
Trigger: GCTGGTCAGTTTCTTTATCCACCCATGGTGCCCCAG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATAGACCCGGGAGGCTGTaGACAGCGCGTCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHRPGRL*TARPLK
Trigger: TTTCAGAGGACGCGCTGTCCACAGCCTCCCGGGTCT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTAGACCCGGGAGGCTGTaGACAGCGCGTCCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTRPGRL*TARPLK
Trigger: TTTCAGAGGACGCGCTGTCCACAGCCTCCCGGGTCT...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGGACCCCACACAGGGTaGCCTTGGCCTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRGPHTG*PWPPGP
Trigger: GGGCCCTGGAGGCCAAGGCCACCCTGTGTGGGGTCC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTGCCGTGTCCACCCCTTaGGACTTGGACGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTAVSTP*DLDVLS
Trigger: TGAGAGGACGTCCAAGTCCCAAGGGGTGGACACGGC...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AACTGTGAAGATCCCTGGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGGATGAACTGTGAAGATCCCTaGAGGTCATGCTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NCEDPWRSCFRGHLGCRMNCEDP*RSCFRG
Trigger: GCCCCTGAAGCATGACCTCCAGGGATCTTCACAGTT...CATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTCACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGGACGTCGGCCAGGGTaGCATATTGCCTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPGRRPG*HIACWL
Trigger: AAGCCAGCAGGCAATATGCCACCCTGGCCGACGTCC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTGGGTGCAGGCTCTaGGGACATGCTTTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKTGCRL*GHAFFR
Trigger: TCGGAAGAAAGCATGTCCTCAGAGCCTGCACCCAGT...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACCATCGGTGGCTGTCCTaGCCAAGAAATCTCATGGAG +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDHRWLS*PRNLME
Trigger: CTCCATGAGATTTCTTGGTCAGGACAGCCACCGATG...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTTCCTGGAGACAACAATaGGGCTGTGGGGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTASWRQQ*GCGGQR
Trigger: CCGCTGTCCCCCACAGCCTCATTGTTGTCTCCAGGA...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGTGGCTGTCCCTGTATaGGGGCTCTTCAGAAACGCC +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYVAVPV*GLFRNA
Trigger: GGCGTTTCTGAAGAGCCCTCATACAGGGACAGCCAC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTGGACAGCGCGTCCTCTaGAATGCTGGTCTCCACACC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAGQRVL*NAGLHT
Trigger: GGTGTGGAGACCAGCATTTCAGAGGACGCGCTGTCC...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGGCAGGAGAATGGCATaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPGRRMA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCATGCCATTCTCCTGCC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACTAGTGTTGAGCTACTaGCTCCCCTACCCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKLVLSY*LPYPAK
Trigger: CTTGGCAGGGTAGGGGAGTCAGTAGCTCAACACTAG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGCTAGTGTTGAGCTACTaGCTCCCCTACCCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQLVLSY*LPYPAK
Trigger: CTTGGCAGGGTAGGGGAGTCAGTAGCTCAACACTAG...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATGCACATTTAGACCCTaGTCCCAGAACTGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISCTFRP*SQNCAF
Trigger: GAAGGCACAGTTCTGGGATCAGGGTCTAAATGTGCA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCAGAGCCCTGCCCAGTaGGTGGTCTTGAAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYQSPAQ*VVLKVL
Trigger: GAGAACCTTCAAGACCACTCACTGGGCAGGGCTCTG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GAAGATCCCTGGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGGATGGGGCAGCGTGCATCATATATGTaGGCTCCACGTTTCATTTCA +
Preference number: 4 (lower is better)
Translates to: EDPWRSCFRGHLGCRMGQRASYM*APRFIS
Trigger: TGAAATGAAACGTGGAGCTCACATATATGATGCACG...CTGCCCCATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS-3UTR GCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATAGCTTGGCCAGCGCCTaGTCCTTGATGGCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHSLASA*SLMASS
Trigger: TGAGCTAGCCATCAAGGAGCAGGCGCTGGCCAAGCT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAATGTCGGAAGATGTGCTaGTGGTCCAGGTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISECRKMC*WSRSSQ
Trigger: CTGAGAAGACCTGGACCAGCAGCACATCTTCCGACA...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAGCAGGCATTTGTGCTaGCGCAGGGCCGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLSRHLC*RRAVWV
Trigger: CACCCAGACGGCCCTGCGGCAGCACAAATGCCTGCT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGCCATAAATGGGTTTTaGCTGCGTCAGGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEAINGF*LRQVLV
Trigger: GACGAGGACCTGACGCAGGCAAAACCCATTTATGGC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGCGCGTCCTCTGAAATaGTGGTCTCCACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYARPLK*WSPHLP
Trigger: AGGCAGGTGTGGAGACCAGCATTTCAGAGGACGCGC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCACTGTCTCCACCCCTaGCCAATGATCCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDHCLHP*PMIHSD
Trigger: GTCTGAGTGGATCATTGGGCAGGGGTGGAGACAGTG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGGGCCTTGCTCTCCATaGTCTTCTGCCTTCATACTT +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISGPCSP*SSAFIL
Trigger: AAGTATGAAGGCAGAAGAGCATGGAGAGCAAGGCCC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGGGAGCTGGTGGCTGCTaGAGAAACAGGTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQGAGGC*RNRFLL
Trigger: CAGCAAGAACCTGTTTCTGCAGCAGCCACCAGCTCC...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGACAACCTGCCGTAGCTaGTGTGCAAGGAAGAACGGC +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQTTCRS*CARKNG
Trigger: GCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCCTCTAAGGGGTGGCTaGAGAACAACCTGCCGTAGC +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYPLRGG*RTTCRS
Trigger: GCTACGGCAGGTTGTTCTGCAGCCACCCCTTAGAGG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGTGCTCCACAGAGCCCTaGCCAGTGAGTGGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQCSTEP*PVSGLE
Trigger: TTCAAGACCACTCACTGGGCAGGGCTCTGTGGAGCA...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTCCCCCACTGAGGCTGTaGCCGAGGAACATGCCGTGT +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLPPLRL*PRNMPC
Trigger: ACACGGCATGTTCCTCGGGCACAGCCTCAGTGGGGG...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CACTCCTGGCTGCAGTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTGGGTTAGTGCGTGCACATTaGTGGCTCAGCGTAACCCAT +
Preference number: 4 (lower is better)
Translates to: HSWLQSWSQLWRCPYSPGLVRAH*WLSVTH
Trigger: ATGGGTTACGCTGAGCCAGCAATGTGCACGCACTAA...CCCAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR GCA 90 bp CTGGGTGCTGCCATGTCGAGGGCCCTACAGCTTGCTTTCAAATGGTTCAGCAGATGTGGAGTTAGTGCGTaGACATTGCTGGCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: LGAAMSRALQLAFKWFSRCGVSA*TLLAQR
Trigger: ACGCTGAGCCAGCAATGTGCACGCACTAACTCCACA...TCTGCTGAACCATTTGAAAGCAAGCTGTAGGGCCCTCGACATGGCAGCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATATCAGCTCCTGGCGCTaGCACTGGGCTTCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHISSWR*HWASSS
Trigger: TGAGCTTGAAGCCCAGTGCCAGCGCCAGGAGCTGAT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCTGGCGCCCAGTTGCTaGCTGAGGTCGGCAATGCGC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDLAPSC*LRSAMR
Trigger: GCGCATTGCCGACCTCAGCCAGCAACTGGGCGCCAG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGTTGGACTGGTTGGCCTaGGAGCAAAGTGCCATCCCT +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQLDWLA*EQSAIP
Trigger: AGGGATGGCACTTTGCTCCCAGGCCAACCAGTCCAA...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCGGAAGATGTGCTGCTaGTCCAGGTCTTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDRKMCC*SRSSQT
Trigger: GGTCTGAGAAGACCTGGACCAGCAGCACATCTTCCG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGCTCTCCTGCTCCAGCTaGGAGGCCAGTGCGCCAACC +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSELSCSS*EASAPT
Trigger: GGTTGGCGCACTGGCCTCCCAGCTGGAGCAGGAGAG...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACGCCTCCAGAGCAATCTaGTCAGAAAGAAGCCTCACC +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDASRAI*SERSLT
Trigger: GGTGAGGCTTCTTTCTGACCAGATTGCTCTGGAGGC...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGATCTTCATGGCCCGCTaGAAGCCTGAGGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQIFMAR*KPEGFQ
Trigger: TTGGAAGCCCTCAGGCTTCCAGCGGGCCATGAAGAT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCGCATGACATCCATCTaGGCCTCCAGCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYRMTSI*ASSSWM
Trigger: CATCCAGGAGCTGGAGGCCCAGATGGATGTCATGCG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAAGCCTCCTGAGTAGCTaGGACTACAGCTACGCAACT +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISESLLSS*DYSYAT
Trigger: AGTTGCGTAGCTGTAGTCCCAGCTACTCAGGAGGCT...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGGTCCCTGTCTGTCCTaGAGCATTCGTGTGACCCAG +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYGPCLS*SIRVTQ
Trigger: CTGGGTCACACGAATGCTCCAGGACAGACAGGGACC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAGCAAGTCTCTGTTCCTaGGGCATGTCCAGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKASLCS*GMSRCN
Trigger: GTTGCACCTGGACATGCCCCAGGAACAGAGACTTGC...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGTTTGTGTAGGGACCTaGCTGCCAACAGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPVCVGT*LPTGTP
Trigger: TGGGGTCCCTGTTGGCAGCCAGGTCCCTACACAAAC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTCTGCAGACCATTTGGTaGGGGAGTCGAGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTALQTIW*GSRGPG
Trigger: CCCAGGTCCTCGACTCCCCCACCAAATGGTCTGCAG...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
3UTR CAA 72 bp TCAGCTGAAAGGAGAAAACACAGGGCTGATCCCAGCTaGCAGGGAAGGGGAAACGAAACGTTGTCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SAERRKHRADPS*QGRGNETLSLA
Trigger: GGCCAGAGACAACGTTTCGTTTCCCCTTCCCTGCAAGCTGGGATCAGCCCTGTGTTTTCTCCTTTCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAATTTGAAGGTCTTGGTTaGCTCTATGGAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEFEGLG*LYGASA
Trigger: GGCAGAGGCTCCATAGAGTCAACCAAGACCTTCAAA...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAGTGCCTCACGGCTCTaGCCCTGCTGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRSASRL*PCWLSS
Trigger: GCTGGAGAGCCAGCAGGGTCAGAGCCGTGAGGCACT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATAATCTGCTATCTGGCTaGTCAGCGAGGCCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHNLLSG*SARPPE
Trigger: CTCTGGAGGCCTCGCTGATCAGCCAGATAGCAGATT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAATCCTGAACCAACAATaGAGAATACTGACCGAGGCC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISILNQQ*RILTEA
Trigger: GGCCTCGGTCAGTATTCTTCATTGTTGGTTCAGGAT...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTGTCCTGCCTGTCTCTaGCCGAGGCATCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDCPACL*PRHPAG
Trigger: GCCAGCTGGATGCCTCGGTCAGAGACAGGCAGGACA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGGGTCTGAAAACACATaGAAACTCCAGGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEGSENT*KLQALL
Trigger: GAGCAAGGCCTGGAGTTTTCATGTGTTTTCAGACCC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACTATCTGGTCAGATCCTaGTGCACTCCAGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDYLVRS*CTPGPC
Trigger: ACAGGGACCTGGAGTGCATCAGGATCTGACCAGATA...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAATTCGCTCACTTCAGCTaGAAGGAGAAAACACAGGGC +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEFAHFS*KEKTQG
Trigger: GCCCTGTGTTTTCTCCTTTCAGCTGAAGTGAGCGAA...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGGAAAGCCCAGGAAGGTaGAAGGTGCGAAAACAGTGG +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQESPGR*KVRKQW
Trigger: CCACTGTTTTCGCACCTTTCACCTTCCTGGGCTTTC...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGAAAGCCCAGGAAGGTaGAAGGTGCGAAAACAGTGG +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDESPGR*KVRKQW
Trigger: CCACTGTTTTCGCACCTTTCACCTTCCTGGGCTTTC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACGGAATTCCAGGATATaGCCAAAGGGCTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKRNSRI*PKGWGI
Trigger: GATTCCCCAGCCCTTTGGTCATATCCTGGAATTCCG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTAAGCTGCGGCAGAGGTaGCTGAAGCATTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPKLRQR*LKHFHS
Trigger: GGAGTGGAAATGCTTCAGTCACCTCTGCCGCAGCTT...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGTGCTCCTCCAGCTGGTaGACCTGCTCACTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSECSSSW*TCSLPS
Trigger: CGAGGGCAGTGAGCAGGTGCACCAGCTGGAGGAGCA...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACCTTTTAACACCAGGTaGCCCTTGGTCGAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKPFNTR*PLVEFG
Trigger: GCCAAACTCGACCAAGGGGCACCTGGTGTTAAAAGG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAACTGGCCAGGGAGGCTaGGCGTGCGTCCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRTGQGG*ACVLLI
Trigger: GATGAGCAGGACGCACGCGCAGCCTCCCTGGCCAGT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGTGTGGCAGGGAGGAATaGAGACGCCCTGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSECGREE*RRPAGL
Trigger: CAGGCCAGCAGGGCGTCTGCATTCCTCCCTGCCACA...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTGGGGCATGTCCAGGTaGAACATGAAGAACATCGTC +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDWGMSR*NMKNIV
Trigger: GACGATGTTCTTCATGTTGCACCTGGACATGCCCCA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGCTGGTCTCCACACCTaGCTGGGGCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRAGLHT*LGLGHH
Trigger: ATGGTGCCCCAGCCCCAGGCAGGTGTGGAGACCAGC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATCCCTGGGATGTCCACTaGATCACCCACTTAGCACAG +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHPWDVH*ITHLAQ
Trigger: CTGTGCTAAGTGGGTGATGCAGTGGACATCCCAGGG...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCCCTGGGATGTCCACTaGATCACCCACTTAGCACAG +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPPWDVH*ITHLAQ
Trigger: CTGTGCTAAGTGGGTGATGCAGTGGACATCCCAGGG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTCAGGCTGTGGGGCCTTaGTCTCCATGCTCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLQAVGP*SPCSSA
Trigger: GGCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTG...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGCAGAAACAGGTTCTTaGTGGGCCTTCCAACTCACT +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEAETGS*WAFQLT
Trigger: AGTGAGTTGGAAGGCCCAGCAAGAACCTGTTTCTGC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGGGAAGGAAGAAGTGTaGTTGTATATGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISGKEEV*LYMAPP
Trigger: TGGAGGTGCCATATACAAGCACACTTCTTCCTTCCC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACTGCCAGGCACCCGATaGGGAGGCGGCCACTTCAGT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRLPGTR*GGGHFS
Trigger: ACTGAAGTGGCCGCCTCCCCATCGGGTGCCTGGCAG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACGCTCCTGCAGCCTCTaGACCTCCTTCTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRRSCSL*TSFCRS
Trigger: GGACCGGCAGAAGGAGGTCCAGAGGCTGCAGGAGCG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGAGTGCTCCAGGCTCTaGTTGTCAGCCTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPECSRL*LSASLL
Trigger: GAGAAGAGAGGCTGACAACCAGAGCCTGGAGCACTC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTCGGTTGTTCAGCTCCTaGTTGTGGGCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTRLFSS*LWALSS
Trigger: GGAGCTCAATGCCCACAACCAGGAGCTGAACAACCG...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGGGGCTGGGGCACCATaGGTGGATAAAGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPGAGAP*VDKETD
Trigger: GTCAGTTTCTTTATCCACCCATGGTGCCCCAGCCCC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTCACTAAGCAGGCTGTaGGGCCTTGCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYSLSRL*GLALHA
Trigger: AGCATGGAGAGCAAGGCCCCACAGCCTGCTTAGTGA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTGCCCATCAGCTGTaGACACATGCCCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKTAHQL*THALAE
Trigger: TTCAGCAAGGGCATGTGTCCACAGCTGATGGGCAGT...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGCCTTCAGCTCAGGCTaGTTCTTAACTGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDAFSSG*FLTAHQ
Trigger: CTGATGGGCAGTTAAGAACCAGCCTGAGCTGAAGGC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATGTTCCTTTCCATGCTaGGTTTATGCCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISCSFPC*VYARLS
Trigger: GGAAAGCCTGGCATAAACCCAGCATGGAAAGGAACA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGTTTGTGAGAACTGCTaGAATCACAAGCTGCGGCAG +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEVCENC*NHKLRQ
Trigger: CTGCCGCAGCTTGTGATTCCAGCAGTTCTCACAAAC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGCTTTCTTGAGACACTaGCCTGACAGTGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYAFLRH*PDSGWP
Trigger: GGGCCATCCACTGTCAGGCCAGTGTCTCAAGAAAGC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGGGGGAGTCGAGGACCTaGGGAAGGAAGAGGACCACC +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEGESRT*GRKRTT
Trigger: GGTGGTCCTCTTCCTTCCCCAGGTCCTCGACTCCCC...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGGTCCACGTAGGCAGGTaGCTGGCTGGCCACATCCAG +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEVHVGR*LAGHIQ
Trigger: CTGGATGTGGCCAGCCAGCCACCTGCCTACGTGGAC...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
3UTR CAA 72 bp CTCTGGAATTCAGGGGTTAAATCCCTTCCAGGGTATTaGGATGCCTGCAGGAAGGAAACTGGAGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LWNSGVKSLPGY*DACRKETGERA
Trigger: GGCCCTCTCTCCAGTTTCCTTCCTGCAGGCATCCAAATACCCTGGAAGGGATTTAACCCCTGAATTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTTCAGACCCTTCGGGGTaGATGTATCTTTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPSDPSG*MYLWHW
Trigger: CCAGTGCCAAAGATACATTCACCCCGAAGGGTCTGA...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATAGGCACATCAGGGCCTaGCTATTCTTGACCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHRHIRA*LFLTWK
Trigger: CTTCCAGGTCAAGAATAGTCAGGCCCTGATGTGCCT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCATGGCTTCGATGGCTaGGATGGTGGCCGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDHGFDG*DGGRCL
Trigger: GAGACAGCGGCCACCATCTCAGCCATCGAAGCCATG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGCTAGTAGCAGAGGAGTaGAAGTGTGGGTTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQLVAEE*KCGLRA
Trigger: GGCTCTTAACCCACACTTTCACTCCTCTGCTACTAG...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTAAGCACTGTGAGGGCTaGAGGCAGATGATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTKHCEG*RQMILS
Trigger: AGACAGGATCATCTGCCTTCAGCCCTCACAGTGCTT...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATGGACAGCGCGTCCTCTaGAATGCTGGTCTCCACACC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDGQRVL*NAGLHT
Trigger: GGTGTGGAGACCAGCATTTCAGAGGACGCGCTGTCC...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTTGGCACCTCCAAGCCTaGAGTCCGTGGAAAACCCAC +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLWHLQA*SPWKTH
Trigger: GTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCA...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTAAGCTGCGGCAGAGGTaGCTGAAGCATTTCCACTCC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAKLRQR*LKHFHS
Trigger: GGAGTGGAAATGCTTCAGTCACCTCTGCCGCAGCTT...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGTGACAGAACGTTTGTaGGAACTGCTGGAATCACAA +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISVTERL*ELLESQ
Trigger: TTGTGATTCCAGCAGTTCTCACAAACGTTCTGTCAC...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATGGTGCACCTGCTCACTaGCCTCGAAAGTGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDGAPAH*PRKWRS
Trigger: TGAGCGCCACTTTCGAGGGCAGTGAGCAGGTGCACC...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGGCCTGGGAGCAAAGTaGCATCCCTTTCTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYGLGAK*HPFLSL
Trigger: AAGAGACAGAAAGGGATGGCACTTTGCTCCCAGGCC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAGCTGCGCGTGCGTCCTaGTCATCCTCCTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPAARAS*SSSWLA
Trigger: GGCCAGCCAGGAGGATGAGCAGGACGCACGCGCAGC...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTCAGACTGGGAGCACTaGTGCAGGGAGGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSDWEH*CREAGF
Trigger: GAAGCCTGCCTCCCTGCAGCAGTGCTCCCAGTCTGA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTTTGCCAGGACTCCTTaGAGAGCTGGAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYFARTP*RAGAPS
Trigger: AGAAGGAGCTCCAGCTCTGCAAGGAGTCCTGGCAAA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGAGGGCTCCCGGGTTTaGCAGGACTCCTTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSREGSRV*QDSLQS
Trigger: GCTCTGCAAGGAGTCCTGGCAAACCCGGGAGCCCTC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTAGGTACTCGCTCTTCTaGTTGCGGAGAAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPRYSLF*LRRSSS
Trigger: TGAGGAGCTTCTCCGCAAGCAGAAGAGCGAGTACCT...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTGAAAACTCCAGGCCTTaGTCCCGGCCCTTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLENSRP*SRPFCT
Trigger: TGTGCAGAAGGGCCGGGAGCAAGGCCTGGAGTTTTC...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAATCCAGGGTATTTGGATaGCTGCAGGAAGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKSRVFG*LQEGNW
Trigger: CCAGTTTCCTTCCTGCAGGCATCCAAATACCCTGGA...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACACCCCAAATTAGGCTaGAGGTCATATGCAAAACCT +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISHPKLG*RSYAKP
Trigger: AGGTTTTGCATATGACCTGCAGCCTAATTTGGGGTG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTTGCTCCACAGAGCCCTaGCCAGTGAGTGGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTACSTEP*PVSGLE
Trigger: TTCAAGACCACTCACTGGGCAGGGCTCTGTGGAGCA...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAGCTGCATCTAAGTTCTaGAGCCTCCACGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKAASKF*SLHGIP
Trigger: TGGAATTCCGTGGAGGCTGCAGAACTTAGATGCAGC...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGCTGCATCTAAGTTCTaGAGCCTCCACGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDAASKF*SLHGIP
Trigger: TGGAATTCCGTGGAGGCTGCAGAACTTAGATGCAGC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGTGTGCCCGAGGAACATaGCGTGTCCACCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSECARGT*RVHPLG
Trigger: TCCCAAGGGGTGGACACGGCATGTTCCTCGGGCACA...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGCCAGGGTGGCATATTaGCTGCTGGCTTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYARVAY*LLALKA
Trigger: TGCCTTTAAAGCCAGCAGGCAATATGCCACCCTGGC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTTCAGGGGTACTCCGTaGCTCTTCCATGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTFRGTP*LFHVLW
Trigger: CCAAAGGACATGGAAGAGCCACGGAGTACCCCTGAA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATAAGGCCCCAGGGCTCTaGTCAGACACATCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDKAPGL*SDTSKG
Trigger: GCCCTTCGATGTGTCTGACCAGAGCCCTGGGGCCTT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTCGGTTGTTCAGCTCCTaGTTGTGGGCATTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTARLFSS*LWALSS
Trigger: GGAGCTCAATGCCCACAACCAGGAGCTGAACAACCG...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGCCTGAGGAAGGGTCGTaGGCATCTCATCCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEPEEGS*ASHPGR
Trigger: ACGCCCTGGATGAGATGCCCACGACCCTTCCTCAGG...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCACTCCATCGCAGGATaGAGCCCACCAGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDHSIAG*SPPAGN
Trigger: GTTCCCTGCTGGTGGGCTCCATCCTGCGATGGAGTG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAATCATCCTTTCTCGCCTaGTTCACTCCATCGCAGGAT +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKSSFLA*FTPSQD
Trigger: ATCCTGCGATGGAGTGAACCAGGCGAGAAAGGATGA...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGCTCCCTGCTCAGTGTaGCACCAGTTGGGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRAPCSV*HQLGSR
Trigger: ACGGCTGCCCAACTGGTGCCACACTGAGCAGGGAGC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGTGTGGCACAGCTTACTaGCTGGTGCTAGCATACTAC +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQCGTAY*LVLAYY
Trigger: GTAGTATGCTAGCACCAGCCAGTAAGCTGTGCCACA...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTTTGCTGAAAGCTGTTTaGCCCAAATGTGTAAACACA +
Preference number: 4 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPLLKAV*PKCVNT
Trigger: TGTGTTTACACATTTGGGCCAAACAGCTTTCAGCAA...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGCCACCCCTTGGGACTTaGACGTCCTCTCAGGCCATC +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEPPLGT*TSSQAI
Trigger: GATGGCCTGAGAGGACGTCCAAGTCCCAAGGGGTGG...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGGCCGTGTCCACCCCTTaGGACTTGGACGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEAVSTP*DLDVLS
Trigger: TGAGAGGACGTCCAAGTCCCAAGGGGTGGACACGGC...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACCAGCGCTGTGTGTGTaGCTGCGCCTCCGAAACACC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRPALCV*LRLRNT
Trigger: GGTGTTTCGGAGGCGCAGCCACACACACAGCGCTGG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGTCTCAGCTGTGGAGATGCCCTTATTCTCCTGGGTGCTGCCATGTCGAGGGCCCAGCTTGCTTTCAAATaGTTCAGCAGAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GLSCGDALILLGAAMSRAQLAFK*FSRKCL
Trigger: AAGACACTTTCTGCTGAACCATTTGAAAGCAAGCTG...GGCCCTCGACATGGCAGCACCCAGGAGAATAAGGGCATCTCCACAGCTGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR TCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTGTCAAGCACTTCCACTaGCTTTGGGGGCACCATGCT +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLVKHFH*LWGHHA
Trigger: AGCATGGTGCCCCCAAAGTCAGTGGAAGTGCTTGAC...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATACATCGAAGGGCTCCTaGGAGCTGTCTGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDTSKGS*ELSESR
Trigger: CCGAGACTCAGACAGCTCTCAGGAGCCCTTCGATGT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTCTGTACTTTCTTCTTaGCTTAACAGGGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSVLSS*LNRGLL
Trigger: GAGGAGACCCCTGTTAAGTCAAGAAGAAAGTACAGA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCTAGTAGCAGAGGAGTaGAAGTGTGGGTTAAGAGCC +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYLVAEE*KCGLRA
Trigger: GGCTCTTAACCCACACTTTCACTCCTCTGCTACTAG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTGTCCAGGTGCAACATaGAGAACATCGTCATCCTTT +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDCPGAT*RTSSSF
Trigger: AAAGGATGACGATGTTCTTCATGTTGCACCTGGACA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCATGCCAAGGAGCAGCCTaGGACCCCGCCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPCQGAA*DPACSC
Trigger: ACAGCTGCAGGCGGGGTCTCAGGCTGCTCCTTGGCA...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAATGCCTTCATACTTGCTaGATCCGAAGGCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKCLHTC*IRRQDP
Trigger: AGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCA...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACACTTACCCAAGTCAGTaGATGAGTAGCTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDTYPSQ*MSSWEK
Trigger: TTTCTCCCAGCTACTCATTCACTGACTTGGGTAAGT...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTTCTGTTGCTTGGCATTaGGAACAGTGGTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPSVAWH*EQWWPS
Trigger: TGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGA...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTCTGTTGCTTGGCATTaGGAACAGTGGTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTSVAWH*EQWWPS
Trigger: TGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGACACATGCCCTTGCTaGAAGCTGTTTGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPDTCPC*KLFGPN
Trigger: ATTTGGGCCAAACAGCTTTCAGCAAGGGCATGTGTC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AACTGTGAAGATCCCTGGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGGATGTCCTGTCCTTCAACATaGGAACATTCGTGCATCATA +
Preference number: 4 (lower is better)
Translates to: NCEDPWRSCFRGHLGCRMSCPST*EHSCII
Trigger: TATGATGCACGAATGTTCTCATGTTGAAGGACAGGA...CATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTCACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACTGTTTCCTCTAAGCTaGTCCCCAAGGCAACCATTT +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKLFPLS*SPRQPF
Trigger: AAATGGTTGCCTTGGGGAGCAGCTTAGAGGAAACAG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCTTCCCTACTGGGGCTaGCATCACCGTACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDLPYWG*HHRTLP
Trigger: GGGAAGAGTACGGTGATGGCAGCCCCAGTAGGGAAG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGAGAACCGGATTCTTTaGCTTTTAACACCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDENRIL*LLTPGA
Trigger: GGCACCTGGTGTTAAAAGGCAAAGAATCCGGTTCTC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGCCAAGCTCTCCAACATaGCCTTCAACCCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEPSSPT*PSTLLA
Trigger: GGCCAGGAGGGTTGAAGGGCATGTTGGAGAGCTTGG...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGTTCTTCAGGGAATCTaGTATCTGGCTGATCAGCGA +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDVLQGI*YLADQR
Trigger: TCGCTGATCAGCCAGATAGCAGATTCCCTGAAGAAC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGCTTCCAAGACCTGCTaGATCACTCTTTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEASKTC*ITLSKS
Trigger: AGACTTTGAAAGAGTGATGCAGCAGGTCTTGGAAGC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTGCTGTGCTTGCTCTCTaGATCCTCCAGACACTGCTG +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLAVLAL*ILQTLL
Trigger: CAGCAGTGTCTGGAGGATGCAGAGAGCAAGCACAGC...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGACAGCTACGCAACTGTaGCACCTCAGAGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQTATQL*HLREVD
Trigger: ATCTACTTCTCTGAGGTGGCACAGTTGCGTAGCTGT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTTGGGGCATGTCCAGGTaGAACATGAAGAACATCGTC +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPWGMSR*NMKNIV
Trigger: GACGATGTTCTTCATGTTGCACCTGGACATGCCCCA...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATAGCCGTCAACATCTGTaGCAGTGTTGCCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSRQHL*QCCHLG
Trigger: GCCCAGGTGGCAACACTGGCACAGATGTTGACGGCT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGGGCCTTGCTCTCCATaGTCTTCTGCCTTCATACTT +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPGPCSP*SSAFIL
Trigger: AAGTATGAAGGCAGAAGAGCATGGAGAGCAAGGCCC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAAACCCACGTTCAGCTaGTATTACCTACTGGAGACG +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDKPTFS*YYLLET
Trigger: CGTCTCCAGTAGGTAATAGCAGCTGAACGTGGGTTT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTACAACCTGCCGTAGCTaGTGTGCAAGGAAGAACGGC +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLTTCRS*CARKNG
Trigger: GCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGGGCTGCAGAACAACCTaGCGTAGCTGCTGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEGCRTT*RSCCAR
Trigger: CCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCC...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTCCAAACAGCTCCAGTaGTCCACAGAGCCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSKQLQ*STEPCP
Trigger: TGGGCAGGGCTCTGTGGAGCACTGGAGCTGTTTGGA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTTCTGTCAACTCAGACTaGGAGCACTGCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLSVNSD*EHCCRE
Trigger: CTCCCTGCAGCAGTGCTCCCAGTCTGAGTTGACAGA...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTCTCAGAGACTCAACCTaGCTCCAGAACTCACCATCC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTALRDST*LQNSPS
Trigger: GGATGGTGAGTTCTGGAGCCAGGTTGAGTCTCTGAG...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATGCCGCAGGGCCGTCTaGGTGCCCCGCAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQCRRAV*VPRRVS
Trigger: GGAGACCCTGCGGGGCACCCAGACGGCCCTGCGGCA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATACCTGGAGAAGCTTCTaGCAATCTCTCAGCGATTCC +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHTWRSF*QSLSDS
Trigger: GGAATCGCTGAGAGATTGCCAGAAGCTTCTCCAGGT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATAGACTCTGGGACACCTaGAGAAGCTTCTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHRLWDT*RSFWQS
Trigger: AGATTGCCAGAAGCTTCTCCAGGTGTCCCAGAGTCT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACTTATACGAGAGACTCTaGGACACCTGGAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDLYERL*DTWRSF
Trigger: GAAGCTTCTCCAGGTGTCCCAGAGTCTCTCGTATAA...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACAAAGACCAGGGTTACTaGAGACCAAGAAAGGAACGA +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDKDQGY*RPRKER
Trigger: TCGTTCCTTTCTTGGTCTCCAGTAACCCTGGTCTTT...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAGGGCTCGATGCCAGTaGAGAGCACTTAGTTATTTC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDRARCQ*RALSYF
Trigger: GAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAATGCAGACGCCCTGCTaGCCTGTCTCTGACCCCTCA +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRMQTPC*PVSDPS
Trigger: TGAGGGGTCAGAGACAGGCCAGCAGGGCGTCTGCAT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACACTCCATCGCAGGATaGAGCCCACCAGCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRHSIAG*SPPAGN
Trigger: GTTCCCTGCTGGTGGGCTCCATCCTGCGATGGAGTG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTGTGGCACAGCTTACTaGCTGGTGCTAGCATACTAC +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYCGTAY*LVLAYY
Trigger: GTAGTATGCTAGCACCAGCCAGTAAGCTGTGCCACA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAGAAACAGGTTCTTGCTaGGCCTTCCAACTCACTAAG +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKETGSC*AFQLTK
Trigger: CTTAGTGAGTTGGAAGGCCCAGCAAGAACCTGTTTC...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGGAGAAAGGGGTATGTaGCCAGCCATTAAAGTCACC +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPGERGM*PAIKVT
Trigger: GGTGACTTTAATGGCTGGCCACATACCCCTTTCTCC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACACGAAACGTTGTCTCTaGCCTGTGTCACCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDTKRCL*PVSPLS
Trigger: ACTAAGAGGTGACACAGGCCAGAGACAACGTTTCGT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTACTGTGCAGAAGTCTaGTCAAGATGGCACCATCAT +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDYCAEV*SRWHHH
Trigger: ATGATGGTGCCATCTTGACCAGACTTCTGCACAGTA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTAAGCAGCAGCTCAGCTaGTCAGGCTTTCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPKQQLS*SGFLET
Trigger: TGTCTCAAGAAAGCCTGACCAGCTGAGCTGCTGCTT...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 72 bp TGGGGCCTTGCTCTCCATGCTCTTCTGCCTTCATACTaGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTA +
Preference number: 4 (lower is better)
Translates to: WGLALHALLPSY*LNPKARSSPML
Trigger: TAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAGAAGAGCATGGAGAGCAAGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 72 bp TATGCAAAACCTAGGAGGCCAAACAGGATTACTTGTTaGTGTAGGGACCTGGCTGCCAACAGGGACCCCACA +
Preference number: 4 (lower is better)
Translates to: YAKPRRPNRITC*CRDLAANRDPT
Trigger: TGTGGGGTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCTAGGTTTTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 72 bp CTGTGCAAGGAAGAACGGCCATCTCAGAACGTTCTGTaGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: LCKEERPSQNVL*LGIENSGGLHL
Trigger: AAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAACGTTCTGAGATGGCCGTTCTTCCTTGCACAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCATTGCTGAGCCGTGCCTaGAGGCTCCGGATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPLLSRA*RLRISA
Trigger: GGCTGAGATCCGGAGCCTTCAGGCACGGCTCAGCAA...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTCTCCAGGGAGTGGATaGTGGAGAGGTACGTGTCAG +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSPGSG*WRGTCQ
Trigger: CTGACACGTACCTCTCCATCATCCACTCCCTGGAGA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTGGGCAAGCTCCTCCTaGATAGCAACAAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDWASSS*IATKAP
Trigger: TGGGGCCTTTGTTGCTATTCAGGAGGAGCTTGCCCA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAACAATGAAGAATACTaGCCGAGGCCTCCCAAACAA +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDNNEEY*PRPPKQ
Trigger: TTGTTTGGGAGGCCTCGGTCAGTATTCTTCATTGTT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGAATCTCGAGCAGTTATaGAAAGACCAGGGTTACTGG +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQNLEQL*KDQGYW
Trigger: CCAGTAACCCTGGTCTTTTCATAACTGCTCGAGATT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGAGGGCTGAAGGCAGATaGTCCTGTCTCCAAGCATGG +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSERAEGR*SCLQAW
Trigger: CCATGCTTGGAGACAGGATCATCTGCCTTCAGCCCT...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTCTGACCAGCAGAAAGTaGCTATTCTGCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLLTSRK*LFCTCR
Trigger: CCTGCACGTGCAGAATAGTCACTTTCTGCTGGTCAG...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTTTCGCTCACTTCAGCTaGAAGGAGAAAACACAGGGC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAFAHFS*KEKTQG
Trigger: GCCCTGTGTTTTCTCCTTTCAGCTGAAGTGAGCGAA...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATGGCACCTCCAAGCCTaGAGTCCGTGGAAAACCCAC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRWHLQA*SPWKTH
Trigger: GTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCTGGTCAGGCTTTCTTaGGACACTGGCCTGACAGTG +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDLVRLS*DTGLTV
Trigger: CACTGTCAGGCCAGTGTCTCAAGAAAGCCTGACCAG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAACTTTGGGGGCACCATaGTGTCTTCCCTACTGGGGC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRTLGAP*CLPYWG
Trigger: GCCCCAGTAGGGAAGACAGCATGGTGCCCCCAAAGT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTGAAAGAAGCCTCACCTaGTCCTGCTCTGTCAACTCA +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAERSLT*SCSVNS
Trigger: TGAGTTGACAGAGCAGGAGCAGGTGAGGCTTCTTTC...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTTCACCCAGGCTGGAGTaGAGTGACACGATCATGACT +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLSPRLE*SDTIMT
Trigger: AGTCATGATCGTGTCACTGCACTCCAGCCTGGGTGA...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTCACGAAGGAAACCATaGCAGGAAGGGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSRRKP*QEGQVV
Trigger: CACCACCTGCCCTTCCTGGCATGGTTTCCTTCGTGA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACAGCACAAGGCTCCCTaGTCAGTGTGGCACCAGTTG +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRQHKAP*SVWHQL
Trigger: CAACTGGTGCCACACTGAGCAGGGAGCCTTGTGCTG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTCACACGAGCACAACTaGCTCGCTTTCCCATTCATA +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTSHEHN*LAFPFI
Trigger: TATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGCGCGTCCTCTGAAATaGTGGTCTCCACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRARPLK*WSPHLP
Trigger: AGGCAGGTGTGGAGACCAGCATTTCAGAGGACGCGC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATGGGCTGATCCCAGCTTaGAGGGAAGGGGAAACGAAA +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDGLIPA*REGETK
Trigger: TTTCGTTTCCCCTTCCCTGCAAGCTGGGATCAGCCC...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGGGGCTGATCCCAGCTTaGAGGGAAGGGGAAACGAAA +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEGLIPA*REGETK
Trigger: TTTCGTTTCCCCTTCCCTGCAAGCTGGGATCAGCCC...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTAAACCCACGTTCAGCTaGTATTACCTACTGGAGACG +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPKPTFS*YYLLET
Trigger: CGTCTCCAGTAGGTAATAGCAGCTGAACGTGGGTTT...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGTTCAGACAGAAACTTaGCCCATCTCTAGGGATGAT +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDVQTET*PISRDD
Trigger: ATCATCCCTAGAGATGGGGCAAGTTTCTGTCTGAAC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGCCTAGTGGCTTGGACTaGTTGGCCTGGGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEPSGLD*LAWEQS
Trigger: ACTTTGCTCCCAGGCCAACCAGTCCAAGCCACTAGG...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAACAGGGCCTTGGGGTGTaGCCCCTGGTGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEQGLGV*PLVEAE
Trigger: CTCTGCCTCCACCAGGGGCCACACCCCAAGGCCCTG...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAACAGCCTCTCCCTGGGTaGCCTGCCAGTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEQPLPG*PASWGQ
Trigger: CTGCCCCCAACTGGCAGGCCACCCAGGGAGAGGCTG...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTCAGTGTTTCTTCCACTaGCCGTCCTCATACTGCTTA +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTQCFFH*PSSYCL
Trigger: TAAGCAGTATGAGGACGGCCAGTGGAAGAAACACTG...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCAGTGTTTCTTCCACTaGCCGTCCTCATACTGCTTA +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYQCFFH*PSSYCL
Trigger: TAAGCAGTATGAGGACGGCCAGTGGAAGAAACACTG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTCAGAGTCTGAAACCTaGGCTGCAGGTCAACAATCT +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTSESET*AAGQQS
Trigger: AGATTGTTGACCTGCAGCCCAGGTTTCAGACTCTGA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACCTTCTTTCTTCCCTCTaGAATTCAGGGGTTAAATCC +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDLLSSL*NSGVKS
Trigger: GGATTTAACCCCTGAATTCCAGAGGGAAGAAAGAAG...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGTTTGTGTAGGGACCTaGCTGCCAACAGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRVCVGT*LPTGTP
Trigger: TGGGGTCCCTGTTGGCAGCCAGGTCCCTACACAAAC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAGTCCTTTTAGAAAGTaGGCTCTTTTGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDSPFRK*ALLPAL
Trigger: CAGTGCTGGCAAAAGAGCCCACTTTCTAAAAGGACT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAACCCGAGCGCTGTGCTaGAACCTAGGGAGGCGGTAC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPTRALC*NLGRRY
Trigger: GTACCGCCTCCCTAGGTTCCAGCACAGCGCTCGGGT...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAAGCATGAATACAAAGTaGAAGCATGTTCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: AAEQPAVAAVQGRTAISESMNTK*KHVLGM
Trigger: CATGCCAAGAACATGCTTTCACTTTGTATTCATGCT...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACACACCAACACAAGCATaGATACAAAGTGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDTPTQA*IQSESM
Trigger: CATGCTTTCACTTTGTATTCATGCTTGTGTTGGTGT...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGCAGTGACACGATCATaGCTGATTGCAGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRAVTRS*LIAAST
Trigger: GGTCGAGGCTGCAATCAGTCATGATCGTGTCACTGC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTCTGTATATTCCCATTaGCACAGAAAGGTCATAGTG +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSVYSH*HRKVIV
Trigger: CACTATGACCTTTCTGTGTCAATGGGAATATACAGA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGTATCTGGTCAGATCCTaGTGCACTCCAGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEYLVRS*CTPGPC
Trigger: ACAGGGACCTGGAGTGCATCAGGATCTGACCAGATA...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTATTTTCCAGGATTCCTaGAGTCCAGCCTCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAIFQDS*SPASRD
Trigger: ATCCCTTGAGGCTGGACTTCAGGAATCCTGGAAAAT...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTGTCCAGGTGCAACATaGAGAACATCGTCATCCTTT +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYCPGAT*RTSSSF
Trigger: AAAGGATGACGATGTTCTTCATGTTGCACCTGGACA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCTGACCAGCAGAAAGTaGCTATTCTGCACGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDLTSRK*LFCTCR
Trigger: CCTGCACGTGCAGAATAGTCACTTTCTGCTGGTCAG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAGCACAGGCCCATTATaGCTCCCTGAAGCACAGGCT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRSTGPL*LPEAQA
Trigger: AGCCTGTGCTTCAGGGAGTCATAATGGGCCTGTGCT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCACCCTCTTCTCCAGCATaGGCTGGAGGGTCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPPSSPA*AGGSRG
Trigger: ACCCCTTGACCCTCCAGCTCATGCTGGAGAAGAGGG...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCTTTCAGGCACATTCTaGGATTCACAACTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDLSGTF*DSQLCS
Trigger: AGAACACAGTTGTGAATCTCAGAATGTGCCTGAAAG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATACCCAAGTCAGTGAATaGGTAGCTGGGAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDTQVSE*VAGRKG
Trigger: CCCCTTTCTCCCAGCTACTCATTCACTGACTTGGGT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTTGCACATTTAGACCCTaGTCCCAGAACTGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLCTFRP*SQNCAF
Trigger: GAAGGCACAGTTCTGGGATCAGGGTCTAAATGTGCA...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAAACACAGTAGTGAACTaGGTGTTCTTCACAATCTAT +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISNTVVN*VFFTIY
Trigger: ATAGATTGTGAAGAACACTCAGTTCACTACTGTGTT...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTGTGACAGAACGTTTGTaGGAACTGCTGGAATCACAA +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTVTERL*ELLESQ
Trigger: TTGTGATTCCAGCAGTTCTCACAAACGTTCTGTCAC...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATCGCCTCCGCTCCCGTaGGCGGCTCCTCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQSPPLP*AAPLLL
Trigger: GAGCAGAAGAGGAGCCGCGCACGGGAGCGGAGGCGA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGCCGCCTCGCTGTGTTaGCGCTCCTCCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQAASLC*RSSSCS
Trigger: CGAGCAGCTGGAGGAGCGGCAACACAGCGAGGCGGC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATCCCGCTGCAGCGCCTaGTGTGTCTCCAGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQSRCSA*CVSRPR
Trigger: ACGGGGCCTGGAGACACAGCAGGCGCTGCAGCGGGA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCATCGTCACAGAGGCTCTaGACGTGCTCTGCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPSSQRL*TCSASL
Trigger: CAGGCTCGCAGAGCACGTGCAGAGCCTCTGTGACGA...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATCTCTCAGCAGAGTGTaGATGCTCTGCAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRSLSRV*MLCSWL
Trigger: CAGCCAGCTGCAGAGCATGCACACTCTGCTGAGAGA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTGGTGTCGGAAGATGTaGTGCTGGTCCAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDWCRKM*CWSRSS
Trigger: AGAAGACCTGGACCAGCAGCACATCTTCCGACACCA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGGTATTCACAAAGTACTaGATCCGAACACCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQVFTKY*IRTPKD
Trigger: GTCCTTAGGTGTTCGGATGCAGTACTTTGTGAATAC...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTCTGATCCCAGAACTGTaGCTTCAACCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLLIPEL*LQPSLP
Trigger: AGGGAGACTTGGTTGAAGGCACAGTTCTGGGATCAG...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATGTGTAATCAGCTCCTaGCGCTGGCACTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRCVISS*RWHWAS
Trigger: TGAAGCCCAGTGCCAGCGCCAGGAGCTGATTACACA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATGCTGTCTTCCCTACTaGGGCTGCCATCACCGTACT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRCCLPY*GCHHRT
Trigger: AGTACGGTGATGGCAGCCCCAGTAGGGAAGACAGCA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGATGTATCTTTGGCACTaGATTGTGGAGAACCGGATT +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQMYLWH*IVENRI
Trigger: AATCCGGTTCTCCACAATCCAGTGCCAAAGATACAT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATTGCAGGCAGTACACTaGGTGCAGGCTCTGAGGACA +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRLQAVH*VQALRT
Trigger: TGTCCTCAGAGCCTGCACCCAGTGTACTGCCTGCAA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAACAACCTGGAGCAGGCTaGCGCGGAGCTGCTCACGCA +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEQPGAG*RGAAHA
Trigger: TGCGTGAGCAGCTCCGCGCCAGCCTGCTCCAGGTTG...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTGACCAAGAAATCTCATaGAGCATTCGGGAGACATCT +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTDQEIS*SIRETS
Trigger: AGATGTCTCCCGAATGCTCCATGAGATTTCTTGGTC...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATCTTCATGGCTTCGATaGCTGAGATGGTGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRSSWLR*LRWWPL
Trigger: CAGCGGCCACCATCTCAGCCATCGAAGCCATGAAGA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAACCTGGGACCTCCTGTaGTTGGGGGTGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHETWDLL*LGVLGL
Trigger: CAGCCCCAGCACCCCCAACCACAGGAGGTCCCAGGT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395811.9
CDS-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACAGAGGAGTGAAAGTGTaGGTTAAGAGCCTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDRGVKV*VKSLKN
Trigger: GTTTTTAAGGCTCTTAACCCACACTTTCACTCCTCT...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGTATCTATATCTGATATaGGGCCTTGCTTTGTCACCC +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQYLYLI*GLALSP
Trigger: GGGTGACAAAGCAAGGCCCCATATCAGATATAGATA...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACAGTGTGGCACCAGTTaGGCAGCCGTCAACATCTGT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRQCGTS*AAVNIC
Trigger: ACAGATGTTGACGGCTGCCCAACTGGTGCCACACTG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTCCCTTCCAGGGTATTTaGATGCCTGCAGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLPFQGI*MPAGRK
Trigger: TTTCCTTCCTGCAGGCATCCAAATACCCTGGAAGGG...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACCTTCTTTCTTCCCTCTaGAATTCAGGGGTTAAATCC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDLLSSL*NSGVKS
Trigger: GGATTTAACCCCTGAATTCCAGAGGGAAGAAAGAAG...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGCTGGGGCACCATGGGTaGATAAAGAAACTGACCAGC +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSELGHHG*IKKLTS
Trigger: GCTGGTCAGTTTCTTTATCCACCCATGGTGCCCCAG...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTACGAAACGTTGTCTCTaGCCTGTGTCACCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTATKRCL*PVSPLS
Trigger: ACTAAGAGGTGACACAGGCCAGAGACAACGTTTCGT...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATACTGCCCATCAGCTGTaGACACATGCCCTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDTAHQL*THALAE
Trigger: TTCAGCAAGGGCATGTGTCCACAGCTGATGGGCAGT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATTACTGTGCAGAAGTCTaGTCAAGATGGCACCATCAT +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHYCAEV*SRWHHH
Trigger: ATGATGGTGCCATCTTGACCAGACTTCTGCACAGTA...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 72 bp CTACTGACTCCCCTACCCTGCCAAGAGCCTTTTCTTTaGTTGAAGGATTTCAGAGAAGGGAGATGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LLTPLPCQEPFL*LKDFREGRCLP
Trigger: GGGAAGACATCTCCCTTCTCTGAAATCCTTCAACAAAAGAAAAGGCTCTTGGCAGGGTAGGGGAGTCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTCATTCGGGAGACATCTaGTGTTGTGTTCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLHSGDI*CCVLQG
Trigger: TCCCTGAAGAACACAACATCAGATGTCTCCCGAATG...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATGTATCTGCTCACCATaGTGCCTCTCCATGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRCICSP*CLSMSC
Trigger: GCAGGACATGGAGAGGCATCATGGTGAGCAGATACA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGCAGCTCCCGGACCTTaGGCTGGAACCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEAAPGP*AGTCPP
Trigger: TGGAGGACAGGTTCCAGCTCAAGGTCCGGGAGCTGC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR TCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGACACCAACACAAGCATaGATACAAAGTGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQTPTQA*IQSESM
Trigger: CATGCTTTCACTTTGTATTCATGCTTGTGTTGGTGT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAAGCACTGTGAGGGCTaGAGGCAGATGATCCTGTCT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRKHCEG*RQMILS
Trigger: AGACAGGATCATCTGCCTTCAGCCCTCACAGTGCTT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTTGCCTTCATACTTGCTaGATCCGAAGGCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLCLHTC*IRRQDP
Trigger: AGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCA...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCACAGAGCCCTGCCCAGTaGGTGGTCTTGAAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPQSPAQ*VVLKVL
Trigger: GAGAACCTTCAAGACCACTCACTGGGCAGGGCTCTG...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACTTCTTTTCATCATGTaGCAGAACGTTTGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKLLFIM*QNVCEN
Trigger: GTTCTCACAAACGTTCTGTCACATGATGAAAAGAAG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGCTTCTTTTCATCATGTaGCAGAACGTTTGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQLLFIM*QNVCEN
Trigger: GTTCTCACAAACGTTCTGTCACATGATGAAAAGAAG...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGCCTCATTGAGGTCCTaGTCCTTCTTCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRASLRS*SFFSRT
Trigger: GGTTCTGGAGAAGAAGGAGCAGGACCTCAATGAGGC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAACCAGGCCCTGTGGGATaGTTTGCTGCCCGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEPGPVG*FAARLL
Trigger: CAGGAGACGGGCAGCAAAGCATCCCACAGGGCCTGG...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAACTCAGCAGGCATTTGTaGTGCCGCAGGGCCGTCTGG +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHELSRHL*CRRAVW
Trigger: CCAGACGGCCCTGCGGCAGCACAAATGCCTGCTGAG...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAGGGCTTCCAAGACCTaGTGCATCACTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLRASKT*CITLSK
Trigger: CTTTGAAAGAGTGATGCAGCAGGTCTTGGAAGCCCT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATCATTTCTCAAAGCACTaGCAATCTAAATGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHHFSKH*QSKWSG
Trigger: CCCTGACCATTTAGATTGGCAGTGCTTTGAGAAATG...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGCTGGTCTCCACACCTaGCTGGGGCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQAGLHT*LGLGHH
Trigger: ATGGTGCCCCAGCCCCAGGCAGGTGTGGAGACCAGC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACTCTCTAGAGAAGAATaGTGGAGGGCAGGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRLSREE*WRAGKP
Trigger: GGGCTTTCCTGCCCTCCAGCATTCTTCTCTAGAGAG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTCCATGCTGGGTTTATaGCAGGCTTTCCTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTSMLGL*QAFLLK
Trigger: CTTTAAAAGGAAAGCCTGGCATAAACCCAGCATGGA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAAGCTACACCAAGCATaGAGTAGCTTAAGTATTCAC +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDKLHQA*SSLSIH
Trigger: GTGAATACTTAAGCTACTGCATGCTTGGTGTAGCTT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATGTCACAAAAATCCCTaGAGTAACTTCTCAGTAATA +
Preference number: 4 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISCHKNP*SNFSVI
Trigger: TATTACTGAGAAGTTACTGCAGGGATTTTTGTGACA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAGCGTTAAATTACTGTaGAGAAGTCTGGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: RRPNRITCLCRDLAANRDSVKLL*RSLVKM
Trigger: CATCTTGACCAGACTTCTGCACAGTAATTTAACGCT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAAGCGTTAAATTACTGTaGAGAAGTCTGGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKSVKLL*RSLVKM
Trigger: CATCTTGACCAGACTTCTGCACAGTAATTTAACGCT...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCTGATCCCAGAACTGTaGCTTCAACCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDLIPEL*LQPSLP
Trigger: AGGGAGACTTGGTTGAAGGCACAGTTCTGGGATCAG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTTCAGCCCTTTCTTCTaGACACAGCTTTTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTFSPFF*TQLLVC
Trigger: ACAGACTAAAAGCTGTGTGCAGAAGAAAGGGCTGAA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGAGTCAGCCTCTCCCTaGGTGGCCTGCCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQESASP*VACQLG
Trigger: CCCCAACTGGCAGGCCACCCAGGGAGAGGCTGACTC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACTCTCCAAGTCCCTCTaGTACTTCTCACGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRLSKSL*YFSRSV
Trigger: CACACTGCGTGAGAAGTACCAGAGGGACTTGGAGAG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAGGACTTTCTCAGCACTaGGGATGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPGLSQH*GCCCCC
Trigger: GCAGCAGCAGCAGCATCCCCAGTGCTGAGAAAGTCC...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCACAGGGGCAGCAGGGATaGTCACGAAGGAAACCATGC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPQGQQG*SRRKPC
Trigger: GCATGGTTTCCTTCGTGACCATCCCTGCTGCCCCTG...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACAAGGTGCGAAAACAGTaGGTAGATACCTTAATTCTA +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDKVRKQ*VDTLIL
Trigger: TAGAATTAAGGTATCTACCCACTGTTTTCGCACCTT...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTTTTACATCTTTAAAGTaGGTGGTGGCATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPFTSLK*VVAWRS
Trigger: GCTTCTCCATGCCACCACCCACTTTAAAGATGTAAA...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATAAGCAGCAGCTCAGCTaGTCAGGCTTTCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDKQQLS*SGFLET
Trigger: TGTCTCAAGAAAGCCTGACCAGCTGAGCTGCTGCTT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATGGAAGGCTTCTCGGTaGCTGATCCTGATGGCCTTA +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRWKASR*LILMAL
Trigger: TAAGGCCATCAGGATCAGCCACCGAGAAGCCTTCCA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CCATGTCGAGGGCCCTACAGCTTGCTTTCAAATGGTTCAGCAGAAAGTGTCTTTTCATGGTCTCAGCTGTaGAGATGCCCTTATTCTCCT +
Preference number: 4 (lower is better)
Translates to: PCRGPYSLLSNGSAESVFSWSQL*RCPYSP
Trigger: AGGAGAATAAGGGCATCTCCACAGCTGAGACCATGA...AAAGACACTTTCTGCTGAACCATTTGAAAGCAAGCTGTAGGGCCCTCGACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR TCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAATCTCGAGCAGTTATaGAAAGACCAGGGTTACTGG +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLNLEQL*KDQGYW
Trigger: CCAGTAACCCTGGTCTTTTCATAACTGCTCGAGATT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATAGCATGAATACAAAGTaGAAGCATGTTCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYSMNTK*KHVLGM
Trigger: CATGCCAAGAACATGCTTTCACTTTGTATTCATGCT...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAGCAGTGACACGATCATaGCTGATTGCAGCCTCGACC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPAVTRS*LIAAST
Trigger: GGTCGAGGCTGCAATCAGTCATGATCGTGTCACTGC...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGAAAAGGGCAAAAGAATaGACAGGGTCTTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEKRAKE*TGSCPW
Trigger: CCAGGGACAAGACCCTGTTCATTCTTTTGCCCTTTT...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGAACACAGTAGTGAACTaGGTGTTCTTCACAATCTAT +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQNTVVN*VFFTIY
Trigger: ATAGATTGTGAAGAACACTCAGTTCACTACTGTGTT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTAAGAATTGTAATTGTTaGGGAGCCACTTGGATGCTT +
Preference number: 4 (lower is better)
Translates to: INLQIRDTATSSRPGMSTKNCNC*GATWML
Trigger: AAGCATCCAAGTGGCTCCTCAACAATTACAATTCTT...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATAAGAATTGTAATTGTTaGGGAGCCACTTGGATGCTT +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYKNCNC*GATWML
Trigger: AAGCATCCAAGTGGCTCCTCAACAATTACAATTCTT...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCACTGGTCAGGCTTTCTTaGGACACTGGCCTGACAGTG +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPLVRLS*DTGLTV
Trigger: CACTGTCAGGCCAGTGTCTCAAGAAAGCCTGACCAG...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATTCTGCAGCAATGCCTaGTTCTCCTTCTCACAGCTC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRFCSNA*FSFSQL
Trigger: GAGCTGTGAGAAGGAGAAGCAGGCATTGCTGCAGAA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGCAGAACCTTCTCATGTaGTTCCTTAATGCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEQNLLM*FLNALQ
Trigger: CTGGAGCGCATTAAGGAAGCACATGAGAAGGTTCTG...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCACAGGCTCTGAGGACATaGTTTCTTCCGAGGGTGACC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPQALRT*FLPRVT
Trigger: GGTCACCCTCGGAAGAAAGCATGTCCTCAGAGCCTG...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGCAGGGTCTCCTGGATaGTCTGTAGCCTGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEAGSPG*SVACGG
Trigger: TCCACCGCAGGCTACAGAGCATCCAGGAGACCCTGC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAATGAAGAACCGTCGCTaGCATTTCCGAGACCGGTGC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPMKNRR*HFRDRC
Trigger: GCACCGGTCTCGGAAATGGCAGCGACGGTTCTTCAT...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATACAGCTACGCAACTGTaGCACCTCAGAGAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDTATQL*HLREVD
Trigger: ATCTACTTCTCTGAGGTGGCACAGTTGCGTAGCTGT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCATCACGAAGGAAACCATaGCAGGAAGGGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPSRRKP*QEGQVV
Trigger: CACCACCTGCCCTTCCTGGCATGGTTTCCTTCGTGA...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTCCTATGGGCAAACTTaGTTTAATTTAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSYGQT*FNLKHC
Trigger: ACAGTGCTTTAAATTAAAGCAAGTTTGCCCATAGGA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGTCACACGAGCACAACTaGCTCGCTTTCCCATTCATA +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSESHEHN*LAFPFI
Trigger: TATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGA...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGAATTACCCACAAGCCTaGAGAAACTCACACGAGCAC +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSENYPQA*RNSHEH
Trigger: GTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAATT...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATGTGCCCGAGGAACATaGCGTGTCCACCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHECARGT*RVHPLG
Trigger: TCCCAAGGGGTGGACACGGCATGTTCCTCGGGCACA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGATCTCTTCTTTTGCCTaGAGCTTAATTTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQISSFA*SLISVS
Trigger: GGAAACAGAAATTAAGCTCCAGGCAAAAGAAGAGAT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACTCTTCCATGTCCTTTaGAGATTCACTTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKLFHVL*RFTCKF
Trigger: AAATTTGCAAGTGAATCTCCAAAGGACATGGAAGAG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGTCAGAGTCTGAAACCTaGGCTGCAGGTCAACAATCT +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSESESET*AAGQQS
Trigger: AGATTGTTGACCTGCAGCCCAGGTTTCAGACTCTGA...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATGAAACAGGTTCTTGCTaGGCCTTCCAACTCACTAAG +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDETGSC*AFQLTK
Trigger: CTTAGTGAGTTGGAAGGCCCAGCAAGAACCTGTTTC...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAGGTGATGGGAGCTGGTaGCTGCTGCAGAAACAGGTT +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPGDGSW*LLQKQV
Trigger: AACCTGTTTCTGCAGCAGCCACCAGCTCCCATCACC...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGGAGAAAGGGGTATGTaGCCAGCCATTAAAGTCACC +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRGERGM*PAIKVT
Trigger: GGTGACTTTAATGGCTGGCCACATACCCCTTTCTCC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAAAGATGACCGTTCACTaGATGAAAAATCTACTGAGT +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKKMTVH*MKNLLS
Trigger: ACTCAGTAGATTTTTCATCCAGTGAACGGTCATCTT...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTTGCTGAAAGCTGTTTaGCCCAAATGTGTAAACACA +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYLLKAV*PKCVNT
Trigger: TGTGTTTACACATTTGGGCCAAACAGCTTTCAGCAA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGTGTTCCTTTCCATGCTaGGTTTATGCCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSECSFPC*VYARLS
Trigger: GGAAAGCCTGGCATAAACCCAGCATGGAAAGGAACA...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATGCCATCCTACATTACTaGAGTCTCCAATTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHAILHY*SLQFLS
Trigger: ACTTAAGAATTGGAGACTCCAGTAATGTAGGATGGC...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 72 bp AGAGGAGTGAAAGTGTGGGTTAAGAGCCTTAAAAACTaGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTA +
Preference number: 4 (lower is better)
Translates to: RGVKVWVKSLKN*WKGLDASGEHL
Trigger: TAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTTTTAAGGCTCTTAACCCACACTTTCACTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATAGCATGTTCTTGGCATaGAAACCATCTACTCACACC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSMFLA*KPSTHT
Trigger: GGTGTGAGTAGATGGTTTTCATGCCAAGAACATGCT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATCCTGGAGACAACAATaGGGCTGTGGGGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQSWRQQ*GCGGQR
Trigger: CCGCTGTCCCCCACAGCCTCATTGTTGTCTCCAGGA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACCTGGAGCATTCGTGTaGCCCAGCAGTGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQPGAFV*PSSVLE
Trigger: CTCCAGGACACTGCTGGGTCACACGAATGCTCCAGG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACTGCTGGCCTGTCTCTaGCCCCTCACATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQLLACL*PLTCCT
Trigger: AGTGCAGCATGTGAGGGGTCAGAGACAGGCCAGCAG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACCCTCTTCTCCAGCATaGGCTGGAGGGTCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQPSSPA*AGGSRG
Trigger: ACCCCTTGACCCTCCAGCTCATGCTGGAGAAGAGGG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCACGGAATTCCAGGATATaGCCAAAGGGCTGGGGAATC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPRNSRI*PKGWGI
Trigger: GATTCCCCAGCCCTTTGGTCATATCCTGGAATTCCG...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATTTCTTAAGTATTCTGTaGCTCAGTGTTTCCTTACCA +
Preference number: 4 (lower is better)
Translates to: ITHKPAETHTSTTASLSHFLSIL*LSVSLP
Trigger: TGGTAAGGAAACACTGAGTCACAGAATACTTAAGAA...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTTCTTAAGTATTCTGTaGCTCAGTGTTTCCTTACCA +
Preference number: 4 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYFLSIL*LSVSLP
Trigger: TGGTAAGGAAACACTGAGTCACAGAATACTTAAGAA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGTCAGAGTCGCCAGTTaGAGGCAGTACACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEVRVAS*RQYTGC
Trigger: GCACCCAGTGTACTGCCTGCAACTGGCGACTCTGAC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAATTCTAGCCGGATTCTaGAGGACGCATAGCAAACCT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRILAGF*RTHSKP
Trigger: AGGTTTGCTATGCGTCCTGCAGAATCCGGCTAGAAT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCACTGCACGTGCAGGCGTaGACACAAGGTAATTACCCA +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPLHVQA*TQGNYP
Trigger: TGGGTAATTACCTTGTGTGCACGCCTGCACGTGCAG...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCACCCCAAATTAGGCTaGAGGTCATATGCAAAACCT +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDHPKLG*RSYAKP
Trigger: AGGTTTTGCATATGACCTGCAGCCTAATTTGGGGTG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTGTATTCACAAAGTACTaGATCCGAACACCTAAGGAC +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLVFTKY*IRTPKD
Trigger: GTCCTTAGGTGTTCGGATGCAGTACTTTGTGAATAC...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTAAGCTACACCAAGCATaGAGTAGCTTAAGTATTCAC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAKLHQA*SSLSIH
Trigger: GTGAATACTTAAGCTACTGCATGCTTGGTGTAGCTT...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAATGTCACAAAAATCCCTaGAGTAACTTCTCAGTAATA +
Preference number: 4 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKCHKNP*SNFSVI
Trigger: TATTACTGAGAAGTTACTGCAGGGATTTTTGTGACA...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGAGGGTGACCGGTCCTaGCTGGTGTCGGAAGATGTG +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQEGDRS*LVSEDV
Trigger: CACATCTTCCGACACCAGCCAGGACCGGTCACCCTC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCATTGGTCTCCAGGGAGTaGATGATGGAGAGGTACGTG +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPLVSRE*MMERYV
Trigger: CACGTACCTCTCCATCATCCACTCCCTGGAGACCAA...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTCTCCCTTTCAACAATaGCGATCACATCCAGGTACT +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSPFQQ*RSHPGT
Trigger: AGTACCTGGATGTGATCGCCATTGTTGAAAGGGAGA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGGACTTTCTCAGCACTaGGGATGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEGLSQH*GCCCCC
Trigger: GCAGCAGCAGCAGCATCCCCAGTGCTGAGAAAGTCC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTAGAGGAGTGAAAGTGTaGGTTAAGAGCCTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTARGVKV*VKSLKN
Trigger: GTTTTTAAGGCTCTTAACCCACACTTTCACTCCTCT...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 72 bp CATCAGCTGTGGACACATGCCCTTGCTGAAAGCTGTTaGGCCCAAATGTGTAAACACAAGAACTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: HQLWTHALAESC*AQMCKHKNCTK
Trigger: CTTTGTACAGTTCTTGTGTTTACACATTTGGGCCAAACAGCTTTCAGCAAGGGCATGTGTCCACAGCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAAGGGCTGAAGGCAGATaGTCCTGTCTCCAAGCATGG +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHERAEGR*SCLQAW
Trigger: CCATGCTTGGAGACAGGATCATCTGCCTTCAGCCCT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGGCAGGAGAATGGCATaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQGRRMA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCATGCCATTCTCCTGCC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCACTCTTTTGCCAGCACTaGGAACCTTCGCTCACTTCA +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPLFCQH*EPSLTS
Trigger: TGAAGTGAGCGAAGGTTCTCAGTGCTGGCAAAAGAG...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATGCGGCAGAGGTGACTaGAGCATTTCCACTCCGTTC +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHECGRGD*SISTPF
Trigger: GAACGGAGTGGAAATGCTTCAGTCACCTCTGCCGCA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAAGCCGTCAACATCTGTaGCAGTGTTGCCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQSRQHL*QCCHLG
Trigger: GCCCAGGTGGCAACACTGGCACAGATGTTGACGGCT...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCATCCAGGGTATTTGGATaGCTGCAGGAAGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPSRVFG*LQEGNW
Trigger: CCAGTTTCCTTCCTGCAGGCATCCAAATACCCTGGA...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAGCAGAAACAGGTTCTTaGTGGGCCTTCCAACTCACT +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPAETGS*WAFQLT
Trigger: AGTGAGTTGGAAGGCCCAGCAAGAACCTGTTTCTGC...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATGCTCTGCAGCTGGCTaGAGACCCTCTGGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQCSAAG*RPSGRS
Trigger: ACTCCTACCAGAGGGTCTCCAGCCAGCTGCAGAGCA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCATCATCCTTTCTCGCCTaGTTCACTCCATCGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPSSFLA*FTPSQD
Trigger: ATCCTGCGATGGAGTGAACCAGGCGAGAAAGGATGA...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGGGGCTGGGGCACCATaGGTGGATAAAGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEGAGAP*VDKETD
Trigger: GTCAGTTTCTTTATCCACCCATGGTGCCCCAGCCCC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTTTACATCTTTAAAGTaGGTGGTGGCATGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDFTSLK*VVAWRS
Trigger: GCTTCTCCATGCCACCACCCACTTTAAAGATGTAAA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGGTTCTCATCAGATTCTaGCATCCTCTGTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: KLVERARCQWRALSYFSEVLIRF*HPLYFL
Trigger: AAGAAAGTACAGAGGATGTCAGAATCTGATGAGAAC...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTCTGTATATTCCCATTaGCACAGAAAGGTCATAGTG +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSVYSH*HRKVIV
Trigger: CACTATGACCTTTCTGTGTCAATGGGAATATACAGA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAAAAAGGGCAAAAGAATaGACAGGGTCTTGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPKRAKE*TGSCPW
Trigger: CCAGGGACAAGACCCTGTTCATTCTTTTGCCCTTTT...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGTGGAAAGGGCTCGATaGCAGTGGAGAGCACTTAGT +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEVERAR*QWRALS
Trigger: ACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCAC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACACTGTCTCCACCCCTaGCCAATGATCCACTCAGAC +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQHCLHP*PMIHSD
Trigger: GTCTGAGTGGATCATTGGGCAGGGGTGGAGACAGTG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATCCATGCTGGGTTTATaGCAGGCTTTCCTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRSMLGL*QAFLLK
Trigger: CTTTAAAAGGAAAGCCTGGCATAAACCCAGCATGGA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATCTTGGTTGACTCTATaGAGCCTCTGCCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQSWLTL*SLCQAP
Trigger: GGGTGCCTGGCAGAGGCTCCATAGAGTCAACCAAGA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAAGCCTCCTGAGTAGCTaGGACTACAGCTACGCAACT +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHESLLSS*DYSYAT
Trigger: AGTTGCGTAGCTGTAGTCCCAGCTACTCAGGAGGCT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAAGGTGCGAAAACAGTaGGTAGATACCTTAATTCTA +
Preference number: 4 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLKVRKQ*VDTLIL
Trigger: TAGAATTAAGGTATCTACCCACTGTTTTCGCACCTT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATTTGCAATCAGAGTCTaGAACCTGGGCTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEFAIRV*NLGCRS
Trigger: TGACCTGCAGCCCAGGTTTCAGACTCTGATTGCAAA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAACTTACCCAAGTCAGTaGATGAGTAGCTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPTYPSQ*MSSWEK
Trigger: TTTCTCCCAGCTACTCATTCACTGACTTGGGTAAGT...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGACACATGCCCTTGCTaGAAGCTGTTTGGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEDTCPC*KLFGPN
Trigger: ATTTGGGCCAAACAGCTTTCAGCAAGGGCATGTGTC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAGTTCAGACAGAAACTTaGCCCATCTCTAGGGATGAT +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPVQTET*PISRDD
Trigger: ATCATCCCTAGAGATGGGGCAAGTTTCTGTCTGAAC...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAGCAAAAACTCCTATCTaGTCAGATCCTGATGCACTC +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPAKTPI*SDPDAL
Trigger: GAGTGCATCAGGATCTGACCAGATAGGAGTTTTTGC...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGCCATCCTACATTACTaGAGTCTCCAATTCTTAAGT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRAILHY*SLQFLS
Trigger: ACTTAAGAATTGGAGACTCCAGTAATGTAGGATGGC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATATAGCGCCCCAGCTTaGCACAGTAGGTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEYSAPA*HSRFCL
Trigger: AAGGCAAAACCTACTGTGCCAAGCTGGGGCGCTATA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATTTGCAATCAGAGTCTaGAACCTGGGCTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQFAIRV*NLGCRS
Trigger: TGACCTGCAGCCCAGGTTTCAGACTCTGATTGCAAA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAATTTTCCAGGATTCCTaGAGTCCAGCCTCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEIFQDS*SPASRD
Trigger: ATCCCTTGAGGCTGGACTTCAGGAATCCTGGAAAAT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCACTTTCAGGCACATTCTaGGATTCACAACTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPLSGTF*DSQLCS
Trigger: AGAACACAGTTGTGAATCTCAGAATGTGCCTGAAAG...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACTCTTTTGCCAGCACTaGGAACCTTCGCTCACTTCA +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQLFCQH*EPSLTS
Trigger: TGAAGTGAGCGAAGGTTCTCAGTGCTGGCAAAAGAG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAACTTCCTTTAGGTTCTaGAGCAATGCCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHETSFRF*SNACFS
Trigger: GGAGAAGCAGGCATTGCTGCAGAACCTAAAGGAAGT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTCCTATGGGCAAACTTaGTTTAATTTAAAGCACTGT +
Preference number: 4 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSYGQT*FNLKHC
Trigger: ACAGTGCTTTAAATTAAAGCAAGTTTGCCCATAGGA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAAATTACCCACAAGCCTaGAGAAACTCACACGAGCAC +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHENYPQA*RNSHEH
Trigger: GTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAATT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACACTCTTTCAAAGTCTaGGGTTTGGTAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQHSFKV*GLVGSQ
Trigger: CTGGGAGCCTACCAAACCCCAGACTTTGAAAGAGTG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATCCCATTCATATGTGTaGCACAGCTTACTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHESHSYV*HSLLAG
Trigger: ACCAGCCAGTAAGCTGTGCCACACATATGAATGGGA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAAGATGACCGTTCACTaGATGAAAAATCTACTGAGT +
Preference number: 4 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRKMTVH*MKNLLS
Trigger: ACTCAGTAGATTTTTCATCCAGTGAACGGTCATCTT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATATAGCGCCCCAGCTTaGCACAGTAGGTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQYSAPA*HSRFCL
Trigger: AAGGCAAAACCTACTGTGCCAAGCTGGGGCGCTATA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGCTTCAAGCTCACTTTaGAGGTCTTGGTTGACTCTA +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEASSSL*RSWLTL
Trigger: TAGAGTCAACCAAGACCTTCAAAGTGAGCTTGAAGC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR GCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGGGAAGGAAGAAGTGTaGTTGTATATGGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQGKEEV*LYMAPP
Trigger: TGGAGGTGCCATATACAAGCACACTTCTTCCTTCCC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAAAAGACCAGGGTTACTaGAGACCAAGAAAGGAACGA +
Preference number: 4 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEKDQGY*RPRKER
Trigger: TCGTTCCTTTCTTGGTCTCCAGTAACCCTGGTCTTT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATCTGTACTTTCTTCTTaGCTTAACAGGGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQSVLSS*LNRGLL
Trigger: GAGGAGACCCCTGTTAAGTCAAGAAGAAAGTACAGA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAAGTCCTTTTAGAAAGTaGGCTCTTTTGCCAGCACTG +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQSPFRK*ALLPAL
Trigger: CAGTGCTGGCAAAAGAGCCCACTTTCTAAAAGGACT...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR GCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATTCAGCCCTTTCTTCTaGACACAGCTTTTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQFSPFF*TQLLVC
Trigger: ACAGACTAAAAGCTGTGTGCAGAAGAAAGGGCTGAA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR TCA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAGTTCTCATCAGATTCTaGCATCCTCTGTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQVLIRF*HPLYFL
Trigger: AAGAAAGTACAGAGGATGTCAGAATCTGATGAGAAC...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 72 bp CAGAGAAGTAGATTTTTAAACAAACCCAATTTTCTCTaGCTGTTAACAACACTGAAGACTAGTAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: QRSRFLNKPNFL*LLTTLKTSSRG
Trigger: TCCTCTGCTACTAGTCTTCAGTGTTGTTAACAGCAAGAGAAAATTGGGTTTGTTTAAAAATCTACTTCTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
3UTR CAA 72 bp ATACATTCCATAAAAATGTTTTTCAAGCCATCAGTTTaGTTTCCGGCCTTATCTGTCAGTATTCCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: IHSIKMFFKPSV*FPALSVSIPFR
Trigger: CCTGAAAGGAATACTGACAGATAAGGCCGGAAACAAAACTGATGGCTTGAAAAACATTTTTATGGAATGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS GCA 90 bp GCCTCGCTGTGTTGCCGCTCCTCCAGCTGCTCGCGGACCCGGCCCTaGTCCCGCTTCAGGTCGCCCTTGAGCTTGGCCAGCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ASLCCRSSSCSRTRP*SRFRSPLSLASACS
Trigger: GGAGCAGGCGCTGGCCAAGCTCAAGGGCGACCTGAAGCGGGAGCAGGGCCGGGTCCGCGAGCAGCTGGAGGAGCGGCAACACAGCGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp AGCTGGCTGCTCAGCGCCGCCTCGCTGTGTTGCCGCTCCTCCAGCTaGTCGCGGACCCGGCCCTGCTCCCGCTTCAGGTCGCCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SWLLSAASLCCRSSS*SRTRPCSRFRSPLS
Trigger: GCTCAAGGGCGACCTGAAGCGGGAGCAGGGCCGGGTCCGCGAGCAGCTGGAGGAGCGGCAACACAGCGAGGCGGCGCTGAGCAGCCAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp TGCTCGCTAGCCCTCAGCTGGCTGCTCAGCGCCGCCTCGCTGTGTTaGCGCTCCTCCAGCTGCTCGCGGACCCGGCCCTGCTCCCGCTTC +
Preference number: 5 (lower is better)
Translates to: CSLALSWLLSAASLC*RSSSCSRTRPCSRF
Trigger: GAAGCGGGAGCAGGGCCGGGTCCGCGAGCAGCTGGAGGAGCGGCAACACAGCGAGGCGGCGCTGAGCAGCCAGCTGAGGGCTAGCGAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp CCTGGAGCAGGCTGGCGCGGAGCTGCTCACGCAGCTGGGCCTCGGTaGCCGCCCACTGGTGGTGCAGTGCGAGCAGTGCCTCACGGCTCT +
Preference number: 5 (lower is better)
Translates to: PGAGWRGAAHAAGPR*PPTGGAVRAVPHGS
Trigger: AGAGCCGTGAGGCACTGCTCGCACTGCACCACCAGTGGGCGGGCACCGAGGCCCAGCTGCGTGAGCAGCTCCGCGCCAGCCTGCTCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp AGCTGGGAGGCCAGTGCGCCAACCTGGAGCAGGCTGGCGCGGAGCTaGTCACGCAGCTGGGCCTCGGTGCCCGCCCACTGGTGGTGCAGT +
Preference number: 5 (lower is better)
Translates to: SWEASAPTWSRLARS*SRSWASVPAHWWCS
Trigger: ACTGCACCACCAGTGGGCGGGCACCGAGGCCCAGCTGCGTGAGCAGCTCCGCGCCAGCCTGCTCCAGGTTGGCGCACTGGCCTCCCAGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp GGAGGCAGGCTTCCCATTCTCCTCGGTGCCACCTGTCTCCAGCTGTaGACGGGCCCCGCCATGGGCTGGGGCCGGCCAGTGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: GGRLPILLGATCLQL*TGPAMGWGRPVLQG
Trigger: GCCCTGCAGCACTGGCCGGCCCCAGCCCATGGCGGGGCCCGTGCACAGCTGGAGACAGGTGGCACCGAGGAGAATGGGAAGCCTGCCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp AGTGCGCCAACCTGGAGCAGGCTGGCGCGGAGCTGCTCACGCAGCTaGGCCTCGGTGCCCGCCCACTGGTGGTGCAGTGCGAGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: SAPTWSRLARSCSRS*ASVPAHWWCSASSA
Trigger: GGCACTGCTCGCACTGCACCACCAGTGGGCGGGCACCGAGGCCCAGCTGCGTGAGCAGCTCCGCGCCAGCCTGCTCCAGGTTGGCGCACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp TCTCCTGCTCCAGCTGGGAGGCCAGTGCGCCAACCTGGAGCAGGCTaGCGCGGAGCTGCTCACGCAGCTGGGCCTCGGTGCCCGCCCACT +
Preference number: 5 (lower is better)
Translates to: SPAPAGRPVRQPGAG*RGAAHAAGPRCPPT
Trigger: AGTGGGCGGGCACCGAGGCCCAGCTGCGTGAGCAGCTCCGCGCCAGCCTGCTCCAGGTTGGCGCACTGGCCTCCCAGCTGGAGCAGGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp CTCGGTGCCACCTGTCTCCAGCTGTGCACGGGCCCCGCCATGGGCTaGGGCCGGCCAGTGCTGCAGGGCTTGGATGGCGCTGACGAGTGC +
Preference number: 5 (lower is better)
Translates to: LGATCLQLCTGPAMG*GRPVLQGLDGADEC
Trigger: GCACTCGTCAGCGCCATCCAAGCCCTGCAGCACTGGCCGGCCCCAGCCCATGGCGGGGCCCGTGCACAGCTGGAGACAGGTGGCACCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp GGCTGGGGCCGGCCAGTGCTGCAGGGCTTGGATGGCGCTGACGAGTaGACTCTCCACACTGGCCAGGGAGGCTGCGCGTGCGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: GWGRPVLQGLDGADE*TLHTGQGGCACVLL
Trigger: GAGCAGGACGCACGCGCAGCCTCCCTGGCCAGTGTGGAGAGTGCACTCGTCAGCGCCATCCAAGCCCTGCAGCACTGGCCGGCCCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp CAGCTGGGCCTCGGTGCCCGCCCACTGGTGGTGCAGTGCGAGCAGTaGCTCACGGCTCTGACCCTGCTGGCTCTCCAGCCTCACGGTCAC +
Preference number: 5 (lower is better)
Translates to: QLGLGARPLVVQCEQ*LTALTLLALQPHGH
Trigger: GTGACCGTGAGGCTGGAGAGCCAGCAGGGTCAGAGCCGTGAGGCACTGCTCGCACTGCACCACCAGTGGGCGGGCACCGAGGCCCAGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp CTGCTCACGCAGCTGGGCCTCGGTGCCCGCCCACTGGTGGTGCAGTaGGAGCAGTGCCTCACGGCTCTGACCCTGCTGGCTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LLTQLGLGARPLVVQ*EQCLTALTLLALQP
Trigger: AGGCTGGAGAGCCAGCAGGGTCAGAGCCGTGAGGCACTGCTCGCACTGCACCACCAGTGGGCGGGCACCGAGGCCCAGCTGCGTGAGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp TGGCTGAGGTCGGCAATGCGCTCCTGCAGCCTCTGGACCTCCTTCTaGCGGTCCCGCTGCAGCGCCTGCTGTGTCTCCAGGCCCCGTAGC +
Preference number: 5 (lower is better)
Translates to: WLRSAMRSCSLWTSF*RSRCSACCVSRPRS
Trigger: GCTACGGGGCCTGGAGACACAGCAGGCGCTGCAGCGGGACCGGCAGAAGGAGGTCCAGAGGCTGCAGGAGCGCATTGCCGACCTCAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp TGCTCACTGGCGCCCAGTTGCTGGCTGAGGTCGGCAATGCGCTCCTaGAGCCTCTGGACCTCCTTCTGCCGGTCCCGCTGCAGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: CSLAPSCWLRSAMRS*SLWTSFCRSRCSAC
Trigger: GCAGGCGCTGCAGCGGGACCGGCAGAAGGAGGTCCAGAGGCTGCAGGAGCGCATTGCCGACCTCAGCCAGCAACTGGGCGCCAGTGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp GGAGGTCCCGCTCGTCACAGAGGCTCTGCACGTGCTCTGCGAGCCTaGGCACGCTGGCCTCTCGTGCCTCCAGCTGCTCCTCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: GGPARHRGSARALRA*ARWPLVPPAAPPAG
Trigger: ACCAGCTGGAGGAGCAGCTGGAGGCACGAGAGGCCAGCGTGCGCAGGCTCGCAGAGCACGTGCAGAGCCTCTGTGACGAGCGGGACCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 90 bp CCTCCATCAGCCGCTGCGCCTGCTCACTGGCGCCCAGTTGCTGGCTaGGGTCGGCAATGCGCTCCTGCAGCCTCTGGACCTCCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: PPSAAAPAHWRPVAG*GRQCAPAASGPPSA
Trigger: GGCAGAAGGAGGTCCAGAGGCTGCAGGAGCGCATTGCCGACCTCAGCCAGCAACTGGGCGCCAGTGAGCAGGCGCAGCGGCTGATGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp GCAATGCGCTCCTGCAGCCTCTGGACCTCCTTCTGCCGGTCCCGCTaGAGCGCCTGCTGTGTCTCCAGGCCCCGTAGCTCCTGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: AMRSCSLWTSFCRSR*SACCVSRPRSSCVF
Trigger: GAAGACGCAGGAGCTACGGGGCCTGGAGACACAGCAGGCGCTGCAGCGGGACCGGCAGAAGGAGGTCCAGAGGCTGCAGGAGCGCATTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp ACGTGCTCTGCGAGCCTGCGCACGCTGGCCTCTCGTGCCTCCAGCTaGTCCTCCAGCTGGTGCACCTGCTCACTGCCCTCGAAAGTGGCG +
Preference number: 5 (lower is better)
Translates to: TCSASLRTLASRASS*SSSWCTCSLPSKVA
Trigger: CGCCACTTTCGAGGGCAGTGAGCAGGTGCACCAGCTGGAGGAGCAGCTGGAGGCACGAGAGGCCAGCGTGCGCAGGCTCGCAGAGCACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp TCCTGGAACCGCTGTCTGAGGAGGTCCCGCTCGTCACAGAGGCTCTaGACGTGCTCTGCGAGCCTGCGCACGCTGGCCTCTCGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: SWNRCLRRSRSSQRL*TCSASLRTLASRAS
Trigger: GGAGGCACGAGAGGCCAGCGTGCGCAGGCTCGCAGAGCACGTGCAGAGCCTCTGTGACGAGCGGGACCTCCTCAGACAGCGGTTCCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp TGTGCTGCCGCAGGGCCGTCTGGGTGCCCCGCAGGGTCTCCTGGATaGTCTGTAGCCTGCGGTGGAACGACTCCCTCACTGACTGTGTGG +
Preference number: 5 (lower is better)
Translates to: CAAAGPSGCPAGSPG*SVACGGTTPSLTVW
Trigger: CCACACAGTCAGTGAGGGAGTCGTTCCACCGCAGGCTACAGAGCATCCAGGAGACCCTGCGGGGCACCCAGACGGCCCTGCGGCAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp CTGACCGAGGCATCCAGCTGGCTCAGGACCCGGCTGCGCTCAGCCTaGAGTGTGCTCTCGGTCCTGGTCAGCTGCTCCACCACACACCGA +
Preference number: 5 (lower is better)
Translates to: LTEASSWLRTRLRSA*SVLSVLVSCSTTHR
Trigger: TCGGTGTGTGGTGGAGCAGCTGACCAGGACCGAGAGCACACTGCAGGCTGAGCGCAGCCGGGTCCTGAGCCAGCTGGATGCCTCGGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp CCCAAGAGGCCAGCTGCTTCTCAGGGAGTGCGAGGGAAAACTGGCTaGCTAAGGCGTCTTCACCCCCGGAGAGAGGAGGGCGAGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PKRPAASQGVRGKTG*LRRLHPRREEGEGP
Trigger: GGGGCCCTCGCCCTCCTCTCTCCGGGGGTGAAGACGCCTTAGGCAGCCAGTTTTCCCTCGCACTCCCTGAGAAGCAGCTGGCCTCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578521.1
CDS CCA 90 bp AGCAGGGCCTCAGCACTCTTGAGCTTCTGCTCGCTAGCCCTCAGCTaGCTGCTCAGCGCCGCCTCGCTGTGTTGCCGCTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SRASALLSFCSLALS*LLSAASLCCRSSSC
Trigger: GCAGCTGGAGGAGCGGCAACACAGCGAGGCGGCGCTGAGCAGCCAGCTGAGGGCTAGCGAGCAGAAGCTCAAGAGTGCTGAGGCCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 90 bp AGCCTGCGCACGCTGGCCTCTCGTGCCTCCAGCTGCTCCTCCAGCTaGTGCACCTGCTCACTGCCCTCGAAAGTGGCGCTCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SLRTLASRASSCSSS*CTCSLPSKVALSFS
Trigger: GGAGAAGCTGAGCGCCACTTTCGAGGGCAGTGAGCAGGTGCACCAGCTGGAGGAGCAGCTGGAGGCACGAGAGGCCAGCGTGCGCAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 90 bp CTCTGTCCCCCGCCCCCTAGTGCTGCCAGAGTCCACGTAGGCAGGTaGCTGGCTGGCCACATCCAGGGAGCTGAGGGAGATGCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: LCPPPPSAARVHVGR*LAGHIQGAEGDAAD
Trigger: GTCTGCAGCATCTCCCTCAGCTCCCTGGATGTGGCCAGCCAGCCACCTGCCTACGTGGACTCTGGCAGCACTAGGGGGCGGGGGACAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000466186.2
ENST00000651222.2
CDS CCA 90 bp GGCCTGGCGGGCACCGGGCTGGGAGCCTCTCAACCCACAGTGGGTTaGGGGTACATAGAGTCCACTTCTGGGAGCTGGGGGTTGGGACTC +
Preference number: 5 (lower is better)
Translates to: GLAGTGLGASQPTVG*GYIESTSGSWGLGL
Trigger: GAGTCCCAACCCCCAGCTCCCAGAAGTGGACTCTATGTACCCCCAACCCACTGTGGGTTGAGAGGCTCCCAGCCCGGTGCCCGCCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS GCA 90 bp CTGCGCACGCTGGCCTCTCGTGCCTCCAGCTGCTCCTCCAGCTGGTaGACCTGCTCACTGCCCTCGAAAGTGGCGCTCAGCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LRTLASRASSCSSSW*TCSLPSKVALSFSF
Trigger: GAAGGAGAAGCTGAGCGCCACTTTCGAGGGCAGTGAGCAGGTGCACCAGCTGGAGGAGCAGCTGGAGGCACGAGAGGCCAGCGTGCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp AGAAGCTCCTCATACTCCTCCCTCAGGGCCCGGGCTGCCTGTGCCTaGTCTGAGCAGGAGGGCTCCCGGGTTTGCCAGGACTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: RSSSYSSLRARAACA*SEQEGSRVCQDSLQ
Trigger: CTGCAAGGAGTCCTGGCAAACCCGGGAGCCCTCCTGCTCAGAGCAGGCACAGGCAGCCCGGGCCCTGAGGGAGGAGTATGAGGAGCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp ACCCGGCTGCGCTCAGCCTGCAGTGTGCTCTCGGTCCTGGTCAGCTaGTCCACCACACACCGAATCTCCTCCTCATACCTGCCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: TRLRSACSVLSVLVS*STTHRISSSYLPRR
Trigger: CCTGCGGGGCAGGTATGAGGAGGAGATTCGGTGTGTGGTGGAGCAGCTGACCAGGACCGAGAGCACACTGCAGGCTGAGCGCAGCCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp TTCTCCTCCATCAGCCGCTGCGCCTGCTCACTGGCGCCCAGTTGCTaGCTGAGGTCGGCAATGCGCTCCTGCAGCCTCTGGACCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FSSISRCACSLAPSC*LRSAMRSCSLWTSF
Trigger: GAAGGAGGTCCAGAGGCTGCAGGAGCGCATTGCCGACCTCAGCCAGCAACTGGGCGCCAGTGAGCAGGCGCAGCGGCTGATGGAGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 90 bp TCAGCCACATCCTCGTCGGACGTGGCCACGCGCTCTGTCAGCTCCTaGAACCGCTGTCTGAGGAGGTCCCGCTCGTCACAGAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SATSSSDVATRSVSS*NRCLRRSRSSQRLC
Trigger: GCAGAGCCTCTGTGACGAGCGGGACCTCCTCAGACAGCGGTTCCAGGAGCTGACAGAGCGCGTGGCCACGTCCGACGAGGATGTGGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 90 bp CCCTCCAGGTCCTTGTGTCCCAGCTCCTCCCGCATGACATCCATCTaGGCCTCCAGCTCCTGGATGCGCTCCCTCAGCCCCGTCATGGAG +
Preference number: 5 (lower is better)
Translates to: PSRSLCPSSSRMTSI*ASSSWMRSLSPVME
Trigger: CTCCATGACGGGGCTGAGGGAGCGCATCCAGGAGCTGGAGGCCCAGATGGATGTCATGCGGGAGGAGCTGGGACACAAGGACCTGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp GCTGAGGGAGATGCTGCAGACCATTTGGTGGGGGAGTCGAGGACCTaGGGAAGGAAGAGGACCACCGAGCTCCTGGGAGGGCGACTCGGG +
Preference number: 5 (lower is better)
Translates to: AEGDAADHLVGESRT*GRKRTTELLGGRLG
Trigger: CCCGAGTCGCCCTCCCAGGAGCTCGGTGGTCCTCTTCCTTCCCCAGGTCCTCGACTCCCCCACCAAATGGTCTGCAGCATCTCCCTCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466186.2
ENST00000651222.2
CDS CCA 90 bp GGGCTCCGGGCCCGAGTTCTACGCTCCAGCCGCCTTCTCTCCACCTaGAAGGCTTCTCGGTGGCTGATCCTGATGGCCTTAGGGACGTCG +
Preference number: 5 (lower is better)
Translates to: GLRARVLRSSRLLST*KASRWLILMALGTS
Trigger: CGACGTCCCTAAGGCCATCAGGATCAGCCACCGAGAAGCCTTCCAGGTGGAGAGAAGGCGGCTGGAGCGTAGAACTCGGGCCCGGAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466186.2
ENST00000584936.2
ENST00000651222.2
CDS TCA 90 bp GTGCCCGCCCACTGGTGGTGCAGTGCGAGCAGTGCCTCACGGCTCTaGCCCTGCTGGCTCTCCAGCCTCACGGTCACGTCTTTGAGCTTT +
Preference number: 5 (lower is better)
Translates to: VPAHWWCSASSASRL*PCWLSSLTVTSLSF
Trigger: AAAGCTCAAAGACGTGACCGTGAGGCTGGAGAGCCAGCAGGGTCAGAGCCGTGAGGCACTGCTCGCACTGCACCACCAGTGGGCGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp ACGCTGGCCTCTCGTGCCTCCAGCTGCTCCTCCAGCTGGTGCACCTaGTCACTGCCCTCGAAAGTGGCGCTCAGCTTCTCCTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TLASRASSCSSSWCT*SLPSKVALSFSFCR
Trigger: CCTGCAGAAGGAGAAGCTGAGCGCCACTTTCGAGGGCAGTGAGCAGGTGCACCAGCTGGAGGAGCAGCTGGAGGCACGAGAGGCCAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp AGGCATCCAGCTGGCTCAGGACCCGGCTGCGCTCAGCCTGCAGTGTaGTCTCGGTCCTGGTCAGCTGCTCCACCACACACCGAATCTCCT +
Preference number: 5 (lower is better)
Translates to: RHPAGSGPGCAQPAV*SRSWSAAPPHTESP
Trigger: AGGAGATTCGGTGTGTGGTGGAGCAGCTGACCAGGACCGAGAGCACACTGCAGGCTGAGCGCAGCCGGGTCCTGAGCCAGCTGGATGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp CATTTGTGCTGCCGCAGGGCCGTCTGGGTGCCCCGCAGGGTCTCCTaGATGCTCTGTAGCCTGCGGTGGAACGACTCCCTCACTGACTGT +
Preference number: 5 (lower is better)
Translates to: HLCCRRAVWVPRRVS*MLCSLRWNDSLTDC
Trigger: ACAGTCAGTGAGGGAGTCGTTCCACCGCAGGCTACAGAGCATCCAGGAGACCCTGCGGGGCACCCAGACGGCCCTGCGGCAGCACAAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp GGCTCAGGACCCGGCTGCGCTCAGCCTGCAGTGTGCTCTCGGTCCTaGTCAGCTGCTCCACCACACACCGAATCTCCTCCTCATACCTGC +
Preference number: 5 (lower is better)
Translates to: GSGPGCAQPAVCSRS*SAAPPHTESPPHTC
Trigger: GCAGGTATGAGGAGGAGATTCGGTGTGTGGTGGAGCAGCTGACCAGGACCGAGAGCACACTGCAGGCTGAGCGCAGCCGGGTCCTGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS TCA 90 bp TGCTCCTTGATGGCTAGCTCAGCGGCCGCATTGCTGAGCCGTGCCTaGAGGCTCCGGATCTCAGCCTCGTGGTGCCGGATCGTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: CSLMASSAAALLSRA*RLRISASWCRIVSL
Trigger: CAAGGACACGATCCGGCACCACGAGGCTGAGATCCGGAGCCTTCAGGCACGGCTCAGCAATGCGGCCGCTGAGCTAGCCATCAAGGAGCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 90 bp CAGAGTCCACGTAGGCAGGTGGCTGGCTGGCCACATCCAGGGAGCTaGGGGAGATGCTGCAGACCATTTGGTGGGGGAGTCGAGGACCTG +
Preference number: 5 (lower is better)
Translates to: QSPRRQVAGWPHPGS*GRCCRPFGGGVEDL
Trigger: CAGGTCCTCGACTCCCCCACCAAATGGTCTGCAGCATCTCCCTCAGCTCCCTGGATGTGGCCAGCCAGCCACCTGCCTACGTGGACTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466186.2
ENST00000651222.2
CDS CCA 90 bp GTCTGGGTGCCCCGCAGGGTCTCCTGGATGCTCTGTAGCCTGCGGTaGAACGACTCCCTCACTGACTGTGTGGCAAAGCTGAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VWVPRRVSWMLCSLR*NDSLTDCVAKLSSA
Trigger: GGCAGAGCTCAGCTTTGCCACACAGTCAGTGAGGGAGTCGTTCCACCGCAGGCTACAGAGCATCCAGGAGACCCTGCGGGGCACCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp TGGCTGGCCACATCCAGGGAGCTGAGGGAGATGCTGCAGACCATTTaGTGGGGGAGTCGAGGACCTGGGGAAGGAAGAGGACCACCGAGC +
Preference number: 5 (lower is better)
Translates to: WLATSRELREMLQTI*WGSRGPGEGRGPPS
Trigger: GCTCGGTGGTCCTCTTCCTTCCCCAGGTCCTCGACTCCCCCACCAAATGGTCTGCAGCATCTCCCTCAGCTCCCTGGATGTGGCCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466186.2
ENST00000651222.2
CDS CCA 90 bp GACTTGTCTGCTGGAGGGAACCAAGGCCATTCCACATATAGGGAGTaGCCTGGCGGGCACCGGGCTGGGAGCCTCTCAACCCACAGTGGG +
Preference number: 5 (lower is better)
Translates to: DLSAGGNQGHSTYRE*PGGHRAGSLSTHSG
Trigger: CCCACTGTGGGTTGAGAGGCTCCCAGCCCGGTGCCCGCCAGGCCACTCCCTATATGTGGAATGGCCTTGGTTCCCTCCAGCAGACAAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS-3UTR CAA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTTCCCTCAGCAGGCATTaGTGCTGCCGCAGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPSLSRH*CCRRAV
Trigger: GACGGCCCTGCGGCAGCACAAATGCCTGCTGAGGGA...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS TCA 90 bp CCTGGCGCTGGCACTGGGCTTCAAGCTCACTTTGAAGGTCTTGGTTaGCTCTATGGAGCCTCTGCCAGGCACCCGATGGGGAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: PGAGTGLQAHFEGLG*LYGASARHPMGRRP
Trigger: TGGCCGCCTCCCCATCGGGTGCCTGGCAGAGGCTCCATAGAGTCAACCAAGACCTTCAAAGTGAGCTTGAAGCCCAGTGCCAGCGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp GATAGCCGGGCAGGCACGTGTGCCTGTCTCAGTGCTTATGCTCCCTaGGATGGCTGGCCCCTTGGTCTTCCCAGCAGCCGACGAGATTCT +
Preference number: 5 (lower is better)
Translates to: DSRAGTCACLSAYAP*DGWPLGLPSSRRDS
Trigger: AGAATCTCGTCGGCTGCTGGGAAGACCAAGGGGCCAGCCATCGCAGGGAGCATAAGCACTGAGACAGGCACACGTGCCTGCCCGGCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS CCA 90 bp TTGAAGGTCTTGGTTGACTCTATGGAGCCTCTGCCAGGCACCCGATaGGGAGGCGGCCACTTCAGTCTGCAGCACGTAGCCCTCACGGGC +
Preference number: 5 (lower is better)
Translates to: LKVLVDSMEPLPGTR*GGGHFSLQHVALTG
Trigger: GCCCGTGAGGGCTACGTGCTGCAGACTGAAGTGGCCGCCTCCCCATCGGGTGCCTGGCAGAGGCTCCATAGAGTCAACCAAGACCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS-3UTR CAA 90 bp GAAGATCCCTGGAGGTCATGCTTCAGGGGCCACCTCGGGTGTAGGATGGGGCAGAAGGGGGTGGGTGTTTaGCTGCGTCAGGTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: EDPWRSCFRGHLGCRMGQKGVGV*LRQVLV
Trigger: GACGAGGACCTGACGCAGCAAAACACCCACCCCCTT...CTGCCCCATCCTACACCCGAGGTGGCCCCTGAAGCATGACCTCCAGGGATCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS TCA 90 bp GCAACAAAGGCCCCAGGGCTCTGGTCAGACACATCGAAGGGCTCCTaGGAGCTGTCTGAGTCTCGGCCCAGGACTTCTCCTAAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: ATKAPGLWSDTSKGS*ELSESRPRTSPKGL
Trigger: GAGCCCCTTAGGAGAAGTCCTGGGCCGAGACTCAGACAGCTCTCAGGAGCCCTTCGATGTGTCTGACCAGAGCCCTGGGGCCTTTGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS TCA 90 bp AGCACGTGGGCAGAGGCTGGCTGTGTCTGGTCTGGAGGGACACGGTaGAAGGCCCGTAAAACAGGGATGAGGGACTTGTCTGCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: STWAEAGCVWSGGTR*KARKTGMRDLSAGG
Trigger: CCCTCCAGCAGACAAGTCCCTCATCCCTGTTTTACGGGCCTTTCACCGTGTCCCTCCAGACCAGACACAGCCAGCCTCTGCCCACGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS CCA 90 bp GTTCTACGCTCCAGCCGCCTTCTCTCCACCTGGAAGGCTTCTCGGTaGCTGATCCTGATGGCCTTAGGGACGTCGGCCAGGGTGGCATAT +
Preference number: 5 (lower is better)
Translates to: VLRSSRLLSTWKASR*LILMALGTSARVAY
Trigger: ATATGCCACCCTGGCCGACGTCCCTAAGGCCATCAGGATCAGCCACCGAGAAGCCTTCCAGGTGGAGAGAAGGCGGCTGGAGCGTAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466186.2
ENST00000584936.2
ENST00000651222.2
CDS-3UTR CAA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAAGCATCCCGAAGCGCTaGCGGCGCTCCTCCCGCCTC +
Preference number: 5 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKSIPKR*RRSSRL
Trigger: GAGGCGGGAGGAGCGCCGCAAGCGCTTCGGGATGCT...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTTGGGCGGCCTTGGCCTaGAGCTCTGCATTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPWAALA*SSAFSL
Trigger: AAGGGAGAATGCAGAGCTCAAGGCCAAGGCCGCCCA...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS TCA 90 bp TTTGGCTGTGCCCTGCTGATGGCCCTCCCTGTCAAGCACTTCCACTaGCTTTGGGGGCACCATGCTGTCTTCCCTACTGGGGCTGCCATC +
Preference number: 5 (lower is better)
Translates to: FGCALLMALPVKHFH*LWGHHAVFPTGAAI
Trigger: GATGGCAGCCCCAGTAGGGAAGACAGCATGGTGCCCCCAAAGTCAGTGGAAGTGCTTGACAGGGAGGGCCATCAGCAGGGCACAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 90 bp GGGTCCTCAGCTCCTCCTCGTGGATCGTCTGCAGCTCCCGGACCTTaGGCTGGAACCTGTCCTCCAGGGTCTGTATCTGCTCACCATGAT +
Preference number: 5 (lower is better)
Translates to: GSSAPPRGSSAAPGP*AGTCPPGSVSAHHD
Trigger: ATCATGGTGAGCAGATACAGACCCTGGAGGACAGGTTCCAGCTCAAGGTCCGGGAGCTGCAGACGATCCACGAGGAGGAGCTGAGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp AGTCGCCAGTTGCAGGCAGTACACTGGGTGCAGGCTCTGAGGACATaGTTTCTTCCGAGGGTGACCGGTCCTGGCTGGTGTCGGAAGATG +
Preference number: 5 (lower is better)
Translates to: SRQLQAVHWVQALRT*FLPRVTGPGWCRKM
Trigger: CATCTTCCGACACCAGCCAGGACCGGTCACCCTCGGAAGAAAGCATGTCCTCAGAGCCTGCACCCAGTGTACTGCCTGCAACTGGCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp CCCCAGAATGTTCCTAGATTGTTCTTCCCCAGGGAGTTGCAAGGCTaGCAGCCTGGCTACGATAGCCGGGCAGGCACGTGTGCCTGTCTC +
Preference number: 5 (lower is better)
Translates to: PQNVPRLFFPRELQG*QPGYDSRAGTCACL
Trigger: GAGACAGGCACACGTGCCTGCCCGGCTATCGTAGCCAGGCTGGCAGCCTTGCAACTCCCTGGGGAAGAACAATCTAGGAACATTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS GCA 90 bp GCTCCACACCCCAGAATGTTCCTAGATTGTTCTTCCCCAGGGAGTTaGAAGGCTGCCAGCCTGGCTACGATAGCCGGGCAGGCACGTGTG +
Preference number: 5 (lower is better)
Translates to: APHPRMFLDCSSPGS*KAASLATIAGQARV
Trigger: CACACGTGCCTGCCCGGCTATCGTAGCCAGGCTGGCAGCCTTGCAACTCCCTGGGGAAGAACAATCTAGGAACATTCTGGGGTGTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS CCA 90 bp GGTGCAGGCTCTGAGGACATGCTTTCTTCCGAGGGTGACCGGTCCTaGCTGGTGTCGGAAGATGTGCTGCTGGTCCAGGTCTTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: GAGSEDMLSSEGDRS*LVSEDVLLVQVFSD
Trigger: GTCTGAGAAGACCTGGACCAGCAGCACATCTTCCGACACCAGCCAGGACCGGTCACCCTCGGAAGAAAGCATGTCCTCAGAGCCTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp GCCTCTCCTCCCAGTGTCCCCAAGTGCTTCCTCAGAGACTCAACCTaGCTCCAGAACTCACCATCCACTAGGACCTTCCTGGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: ASPPSVPKCFLRDST*LQNSPSTRTFLAQV
Trigger: CACCTGGGCCAGGAAGGTCCTAGTGGATGGTGAGTTCTGGAGCCAGGTTGAGTCTCTGAGGAAGCACTTGGGGACACTGGGAGGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS-3UTR CAA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAGCCAGCGCCTGCTCCTaGATGGCTAGCTCAGCGGCC +
Preference number: 5 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKASACS*MASSAA
Trigger: GGCCGCTGAGCTAGCCATCAAGGAGCAGGCGCTGGC...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAACCAGTGCTGCAGGGCTaGGATGGCGCTGACGAGTGC +
Preference number: 5 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEPVLQG*DGADEC
Trigger: GCACTCGTCAGCGCCATCCAAGCCCTGCAGCACTGG...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GCTGGATGTCAGATGCGTCCGTCCAGGCACTCCTGGCTGCAGTCATGGTCTCAGTCACTTGCGTACTTCTaGTCCCGCAGTGCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: AGCQMRPSRHSWLQSWSQSLAYF*SRSAVC
Trigger: GCAGACGGCACTGCGGGACAAGAAGTACGCAAGTGA...CTGAGACCATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS GCA 90 bp CCCTTTCAACAATGGCGATCACATCCAGGTACTCGCTCTTCTGCTTaGGGAGAAGCTCCTCATACTCCTCCCTCAGGGCCCGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: PFQQWRSHPGTRSSA*GEAPHTPPSGPGLP
Trigger: AGGCAGCCCGGGCCCTGAGGGAGGAGTATGAGGAGCTTCTCCGCAAGCAGAAGAGCGAGTACCTGGATGTGATCGCCATTGTTGAAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp TGGCTGATCCTGATGGCCTTAGGGACGTCGGCCAGGGTGGCATATTaGCTGCTGGCTTTAAAGGCAAAGGCGCTCCCCAGTCTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: WLILMALGTSARVAY*LLALKAKALPSLSV
Trigger: GACAGAGAGACTGGGGAGCGCCTTTGCCTTTAAAGCCAGCAGGCAATATGCCACCCTGGCCGACGTCCCTAAGGCCATCAGGATCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466186.2
ENST00000651222.2
CDS CCA 90 bp CTTCCTCCTTCTCTCTCAGCAGAGTGTGCATGCTCTGCAGCTGGCTaGAGACCCTCTGGTAGGAGTGCTCCAGGCTCTGGTTGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: LPPSLSAECACSAAG*RPSGRSAPGSGCQP
Trigger: AGGCTGACAACCAGAGCCTGGAGCACTCCTACCAGAGGGTCTCCAGCCAGCTGCAGAGCATGCACACTCTGCTGAGAGAGAAGGAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 90 bp TCCTCGAGCCTTGTGTGTGGGAGGCCTAGAGGTGCCCTAGTGGCTTaGACTGGTTGGCCTGGGAGCAAAGTGCCATCCCTTTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: SSSLVCGRPRGALVA*TGWPGSKVPSLSVS
Trigger: AGAGACAGAAAGGGATGGCACTTTGCTCCCAGGCCAACCAGTCCAAGCCACTAGGGCACCTCTAGGCCTCCCACACACAAGGCTCGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 90 bp CTTCCGAGGGTGACCGGTCCTGGCTGGTGTCGGAAGATGTGCTGCTaGTCCAGGTCTTCTCAGACCCTTCGGGGTGAATGTATCTTTGGC +
Preference number: 5 (lower is better)
Translates to: LPRVTGPGWCRKMCC*SRSSQTLRGECIFG
Trigger: GCCAAAGATACATTCACCCCGAAGGGTCTGAGAAGACCTGGACCAGCAGCACATCTTCCGACACCAGCCAGGACCGGTCACCCTCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp CAGGCTCTGAGGACATGCTTTCTTCCGAGGGTGACCGGTCCTGGCTaGTGTCGGAAGATGTGCTGCTGGTCCAGGTCTTCTCAGACCCTT +
Preference number: 5 (lower is better)
Translates to: QALRTCFLPRVTGPG*CRKMCCWSRSSQTL
Trigger: AAGGGTCTGAGAAGACCTGGACCAGCAGCACATCTTCCGACACCAGCCAGGACCGGTCACCCTCGGAAGAAAGCATGTCCTCAGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp GCAGGCACGTGTGCCTGTCTCAGTGCTTATGCTCCCTGCGATGGCTaGCCCCTTGGTCTTCCCAGCAGCCGACGAGATTCTAGAAGACAA +
Preference number: 5 (lower is better)
Translates to: AGTCACLSAYAPCDG*PLGLPSSRRDSRRQ
Trigger: TTGTCTTCTAGAATCTCGTCGGCTGCTGGGAAGACCAAGGGGCCAGCCATCGCAGGGAGCATAAGCACTGAGACAGGCACACGTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS-3UTR CAA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATCGCTTCAGGTCGCCCTaGAGCTTGGCCAGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: ITHKPAETHTSTTASLSHRFRSP*SLASAC
Trigger: GCAGGCGCTGGCCAAGCTCAAGGGCGACCTGAAGCG...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGGGAGGGCTCCCGGGTTaGCCAGGACTCCTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQGGLPG*PGLLAE
Trigger: CTCTGCAAGGAGTCCTGGCAAACCCGGGAGCCCTCC...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTCGCCCTCCAGGTCCTaGTGTCCCAGCTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYSPSRS*CPSSSR
Trigger: GCGGGAGGAGCTGGGACACAAGGACCTGGAGGGCGA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACGCAGGCTGTGGGGCCTaGCTCTCCATGCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDAGCGA*LSMLFC
Trigger: GCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTGC...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCCACACAGGGTGGCCTaGGCCTCCAGGGCCCTGCAA +
Preference number: 5 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPPHRVA*ASRALQ
Trigger: TTGCAGGGCCCTGGAGGCCAAGGCCACCCTGTGTGG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS TCA 90 bp GGTCCCAGGACAGCTGAACACCATCTTCATGGCCCGCTGGAAGCCTaGGGGCTTCCAAGACCTGCTGCATCACTCTTTCAAAGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GPRTAEHHLHGPLEA*GLPRPAASLFQSLG
Trigger: CCCCAGACTTTGAAAGAGTGATGCAGCAGGTCTTGGAAGCCCTCAGGCTTCCAGCGGGCCATGAAGATGGTGTTCAGCTGTCCTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS TCA 90 bp GCTCCACCACACACCGAATCTCCTCCTCATACCTGCCCCGCAGGGTaGACATGCTCATGCTGTGCTTGCTCTCTGCATCCTCCAGACACT +
Preference number: 5 (lower is better)
Translates to: APPHTESPPHTCPAG*TCSCCACSLHPPDT
Trigger: AGTGTCTGGAGGATGCAGAGAGCAAGCACAGCATGAGCATGTTCACCCTGCGGGGCAGGTATGAGGAGGAGATTCGGTGTGTGGTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp TGCTTTCTTCCGAGGGTGACCGGTCCTGGCTGGTGTCGGAAGATGTaGTGCTGGTCCAGGTCTTCTCAGACCCTTCGGGGTGAATGTATC +
Preference number: 5 (lower is better)
Translates to: CFLPRVTGPGWCRKM*CWSRSSQTLRGECI
Trigger: GATACATTCACCCCGAAGGGTCTGAGAAGACCTGGACCAGCAGCACATCTTCCGACACCAGCCAGGACCGGTCACCCTCGGAAGAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp CGTCAGGCCTTCCTTCAGACTCTCCTGCATGGGCCGGGAAGCGGGTaGATTTCAGGTATCCCACGAGACCTGCTCAATTACGGACTTGGA +
Preference number: 5 (lower is better)
Translates to: RQAFLQTLLHGPGSG*ISGIPRDLLNYGLG
Trigger: TCCAAGTCCGTAATTGAGCAGGTCTCGTGGGATACCTGAAATGCACCCGCTTCCCGGCCCATGCAGGAGAGTCTGAAGGAAGGCCTGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341712.8
ENST00000414263.5
CDS GCA 90 bp TGGCTGATCCTGATGGCCTTAGGGACGTCGGCCAGGGTGGCATATTaGCTGCTGGCTTTAAAGGCAAAGGCGCTCCCCAGTCTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: WLILMALGTSARVAY*LLALKAKALPSLLC
Trigger: GCAAAGAAGACTGGGGAGCGCCTTTGCCTTTAAAGCCAGCAGGCAATATGCCACCCTGGCCGACGTCCCTAAGGCCATCAGGATCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584936.2
CDS CCA 90 bp CTTGTGTGTGGGAGGCCTAGAGGTGCCCTAGTGGCTTGGACTGGTTaGCCTGGGAGCAAAGTGCCATCCCTTTCTGTCTCTTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: LVCGRPRGALVAWTG*PGSKVPSLSVSSGV
Trigger: TACCCCTGAAGAGACAGAAAGGGATGGCACTTTGCTCCCAGGCCAACCAGTCCAAGCCACTAGGGCACCTCTAGGCCTCCCACACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 90 bp CCTGGGAGAAGTTGGTATGGTAGGTGGGGACAGGCTGCTATGAAATaGAAACCAGCCAACCCTGGACCTTCCTGCGTTGCTGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PGRSWYGRWGQAAMK*KPANPGPSCVAARW
Trigger: CCACCTGGCAGCAACGCAGGAAGGTCCAGGGTTGGCTGGTTTCCATTTCATAGCAGCCTGTCCCCACCTACCATACCAACTTCTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS-3UTR CAA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTCTGACCCATGTGGCATaGGCCAGGATGGGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPLTHVA*ARMGAR
Trigger: CCTGGCCCCCATCCTGGCCAATGCCACATGGGTCAG...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACTGCAGCTCCCGGACCTaGAGCTGGAACCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: RRPNRITCLCRDLAANRDCSSRT*SWNLSS
Trigger: GGAGGACAGGTTCCAGCTCAAGGTCCGGGAGCTGCA...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTCGGCCCTTCTGCACATaGGGGGCGGGGCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLRPFCT*GAGPEL
Trigger: GAGCTCTGGCCCCGCCCCCAATGTGCAGAAGGGCCG...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGCAGGCTGTGGGGCCTaGCTCTCCATGCTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RRPNRITCLCRDLAANRDAGCGA*LSMLFC
Trigger: GCAGAAGAGCATGGAGAGCAAGGCCCCACAGCCTGC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAAGGGCTGATCCCAGCTaGCAGGGAAGGGGAAACGAA +
Preference number: 5 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISRADPS*QGRGNE
Trigger: TTCGTTTCCCCTTCCCTGCAAGCTGGGATCAGCCCT...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGATGCTGCAGACCATTaGGTGGGGGAGTCGAGGACC +
Preference number: 5 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEDAADH*VGESRT
Trigger: GGTCCTCGACTCCCCCACCAAATGGTCTGCAGCATC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CACGGCTGGATGTCAGATGCGTCCGTCCAGGCACTCCTGGCTGCAGTCATGGTCTTTGCAGCTCAGGGTTaGCATTCCCAGGTAGAACAG +
Preference number: 5 (lower is better)
Translates to: HGWMSDASVQALLAAVMVFAAQG*HSQVEQ
Trigger: CTGTTCTACCTGGGAATGCAAACCCTGAGCTGCAAA...GACCATGACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR CAA 90 bp GTCCGTCCAGGCACTCCTGGCTGCAGTCATGGTCTCAGCTGTGGAGATGCCCTTCGAGGGCCCTACAGCTaGCTTTCAAATGGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: VRPGTPGCSHGLSCGDALRGPYS*LSNGSA
Trigger: TGCTGAACCATTTGAAAGCAAGCTGTAGGGCCCTCG...AAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTGCCTGGACGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS TCA 90 bp TCTAAGAGGCTGGCCTTCTCCTTCAGCTGCTGGGCAAGCTCCTCCTaGATAGCAACAAAGGCCCCAGGGCTCTGGTCAGACACATCGAAG +
Preference number: 5 (lower is better)
Translates to: SKRLAFSFSCWASSS*IATKAPGLWSDTSK
Trigger: CTTCGATGTGTCTGACCAGAGCCCTGGGGCCTTTGTTGCTATTCAGGAGGAGCTTGCCCAGCAGCTGAAGGAGAAGGCCAGCCTCTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS TCA 90 bp CCTCCAGACACTGCTGCTGATGGTCTAGCTGGGCGGCCTTGGCCTTaGGCTCTGCATTCTCCCTTTCAACAATGGCGATCACATCCAGGT +
Preference number: 5 (lower is better)
Translates to: PPDTAADGLAGRPWP*ALHSPFQQWRSHPG
Trigger: ACCTGGATGTGATCGCCATTGTTGAAAGGGAGAATGCAGAGCTCAAGGCCAAGGCCGCCCAGCTAGACCATCAGCAGCAGTGTCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp GCACTGGATTGTGGAGAACCGGATTCTTTGCCTTTTAACACCAGGTaGCCCTTGGTCGAGTTTGGCTGTGCCCTGCTGATGGCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: ALDCGEPDSLPFNTR*PLVEFGCALLMALP
Trigger: AGGGAGGGCCATCAGCAGGGCACAGCCAAACTCGACCAAGGGGCACCTGGTGTTAAAAGGCAAAGAATCCGGTTCTCCACAATCCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp TTCTCCCTTTCAACAATGGCGATCACATCCAGGTACTCGCTCTTCTaGTTGCGGAGAAGCTCCTCATACTCCTCCCTCAGGGCCCGGGCT +
Preference number: 5 (lower is better)
Translates to: FSLSTMAITSRYSLF*LRRSSSYSSLRARA
Trigger: AGCCCGGGCCCTGAGGGAGGAGTATGAGGAGCTTCTCCGCAAGCAGAAGAGCGAGTACCTGGATGTGATCGCCATTGTTGAAAGGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp CAGAAAGTGTCTTTAACACCTGTGGAGTTAGTGCGTGCACATTGCTaGCTCAGCGTAACCCATCACGGGACCGGAGGAGAGGAGAGCGGG +
Preference number: 5 (lower is better)
Translates to: QKVSLTPVELVRAHC*LSVTHHGTGGEESG
Trigger: CCCGCTCTCCTCTCCTCCGGTCCCGTGATGGGTTACGCTGAGCCAGCAATGTGCACGCACTAACTCCACAGGTGTTAAAGACACTTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR CAA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCGCCGCCTCGCTGTGTaGCCGCTCCTCCAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDRRLAV*PLLQLL
Trigger: GAGCAGCTGGAGGAGCGGCAACACAGCGAGGCGGCG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGAGTGGCTTGGACTGGTaGGCCTGGGAGCAAAGTGCC +
Preference number: 5 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQSGLDW*AWEQSA
Trigger: GGCACTTTGCTCCCAGGCCAACCAGTCCAAGCCACT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTCACTTGCGTACTTCTaGTCCCGCAGTGCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDSLAYF*SRSAVC
Trigger: GCAGACGGCACTGCGGGACAAGAAGTACGCAAGTGA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCGGCCCTTCTGCACATaGGGGGCGGGGCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDRPFCT*GAGPEL
Trigger: GAGCTCTGGCCCCGCCCCCAATGTGCAGAAGGGCCG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTAGAAAGTGGGCTCTTTaGCCAGCACTGAGAACCTTC +
Preference number: 5 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPRKWAL*PALRTF
Trigger: GAAGGTTCTCAGTGCTGGCAAAAGAGCCCACTTTCT...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCATGTGGACACATGCCCTaGCTGAAAGCTGTTTGGCCC +
Preference number: 5 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISCGHMP*LKAVWP
Trigger: GGGCCAAACAGCTTTCAGCAAGGGCATGTGTCCACA...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAATCCACCCCTTGGGACTaGGACGTCCTCTCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKSTPWD*DVLSGH
Trigger: ATGGCCTGAGAGGACGTCCAAGTCCCAAGGGGTGGA...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTGCCGTGTCCACCCCTaGGGACTTGGACGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYCRVHP*GLGRPL
Trigger: GAGAGGACGTCCAAGTCCCAAGGGGTGGACACGGCA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACGGCCAGGGTGGCATATaGCCTGCTGGCTTTAAAGGC +
Preference number: 5 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDGQGGI*PAGFKG
Trigger: GCCTTTAAAGCCAGCAGGCAATATGCCACCCTGGCC...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS TCA 90 bp TGTGTAATCAGCTCCTGGCGCTGGCACTGGGCTTCAAGCTCACTTTaGAGGTCTTGGTTGACTCTATGGAGCCTCTGCCAGGCACCCGAT +
Preference number: 5 (lower is better)
Translates to: CVISSWRWHWASSSL*RSWLTLWSLCQAPD
Trigger: ATCGGGTGCCTGGCAGAGGCTCCATAGAGTCAACCAAGACCTTCAAAGTGAGCTTGAAGCCCAGTGCCAGCGCCAGGAGCTGATTACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 90 bp TTTCTTCCGAGGGTGACCGGTCCTGGCTGGTGTCGGAAGATGTGCTaGTGGTCCAGGTCTTCTCAGACCCTTCGGGGTGAATGTATCTTT +
Preference number: 5 (lower is better)
Translates to: FLPRVTGPGWCRKMC*WSRSSQTLRGECIF
Trigger: AAAGATACATTCACCCCGAAGGGTCTGAGAAGACCTGGACCAGCAGCACATCTTCCGACACCAGCCAGGACCGGTCACCCTCGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp CAGCAGAAAGTGTCTTTAACACCTGTGGAGTTAGTGCGTGCACATTaGTGGCTCAGCGTAACCCATCACGGGACCGGAGGAGAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: QQKVSLTPVELVRAH*WLSVTHHGTGGEES
Trigger: GCTCTCCTCTCCTCCGGTCCCGTGATGGGTTACGCTGAGCCAGCAATGTGCACGCACTAACTCCACAGGTGTTAAAGACACTTTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR CAA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATAACACCAGGTGCCCCTaGGTCGAGTTTGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: ITHKPAETHTSTTASLSHNTRCP*VEFGCA
Trigger: GGCACAGCCAAACTCGACCAAGGGGCACCTGGTGTT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACTGTCAGAGTCGCCAGTaGCAGGCAGTACACTGGGTG +
Preference number: 5 (lower is better)
Translates to: RRPNRITCLCRDLAANRDCQSRQ*QAVHWV
Trigger: CACCCAGTGTACTGCCTGCAACTGGCGACTCTGACA...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGTCAGTGTGGCACCAGTaGGGCAGCCGTCAACATCTG +
Preference number: 5 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQSVWHQ*GSRQHL
Trigger: CAGATGTTGACGGCTGCCCAACTGGTGCCACACTGA...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCCACACAGGGTGGCCTaGGCCTCCAGGGCCCTGCAA +
Preference number: 5 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDPHRVA*ASRALQ
Trigger: TTGCAGGGCCCTGGAGGCCAAGGCCACCCTGTGTGG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTCCACCCCTTGGGACTaGGACGTCCTCTCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: INLQIRDTATSSRPGMSTSTPWD*DVLSGH
Trigger: ATGGCCTGAGAGGACGTCCAAGTCCCAAGGGGTGGA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACGCTGGTCAGGCTTTCTaGAGACACTGGCCTGACAGT +
Preference number: 5 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDAGQAF*RHWPDS
Trigger: ACTGTCAGGCCAGTGTCTCAAGAAAGCCTGACCAGC...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp TTGTGCACACGGCTGGATGTCAGATGCGTCCGTCCAGGCACTCCTGGCTGCAGTACAGGTGTCGTACACTaGGACCTGATGTTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: LCTRLDVRCVRPGTPGCSTGVVH*DLMFLS
Trigger: ACTCAGAAACATCAGGTCCAAGTGTACGACACCTGT...ACTGCAGCCAGGAGTGCCTGGACGGACGCATCTGACATCCAGCCGTGTGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR CAA 90 bp CCATGTCGAGGGCCCTACAGCTTGCTTTCAAATGGTTCAGCAGAAAGTGTCTTTGCAGCAGCCCTGGGCTaGTGCACACGGCTGGATGTC +
Preference number: 5 (lower is better)
Translates to: PCRGPYSLLSNGSAESVFAAALG*CTRLDV
Trigger: GACATCCAGCCGTGTGCACAAGCCCAGGGCTGCTGC...AAAGACACTTTCTGCTGAACCATTTGAAAGCAAGCTGTAGGGCCCTCGACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS TCA 90 bp GTGTCTGGTCTGGAGGGACACGGTGAAAGGCCCGTAAAACAGGGATaGGGGACTTGTCTGCTGGAGGGAACCAAGGCCATTCCACATATA +
Preference number: 5 (lower is better)
Translates to: VSGLEGHGERPVKQG*GTCLLEGTKAIPHI
Trigger: TATATGTGGAATGGCCTTGGTTCCCTCCAGCAGACAAGTCCCTCATCCCTGTTTTACGGGCCTTTCACCGTGTCCCTCCAGACCAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS TCA 90 bp TTCTTCCTGGGAGAAGTTGGTATGGTAGGTGGGGACAGGCTGCTATaGAATGGAAACCAGCCAACCCTGGACCTTCCTGCGTTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: FFLGEVGMVGGDRLL*NGNQPTLDLPALLP
Trigger: TGGCAGCAACGCAGGAAGGTCCAGGGTTGGCTGGTTTCCATTTCATAGCAGCCTGTCCCCACCTACCATACCAACTTCTCCCAGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS CCA 90 bp CCGAGGCCTCCCAAACAAGTGTTATACGAGAGACTCTGGGACACCTaGAGAAGCTTCTGGCAATCTCTCAGCGATTCCACAGGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: PRPPKQVLYERLWDT*RSFWQSLSDSTGGR
Trigger: TCTGCCACCTGTGGAATCGCTGAGAGATTGCCAGAAGCTTCTCCAGGTGTCCCAGAGTCTCTCGTATAACACTTGTTTGGGAGGCCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS-3UTR CAA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAGGTGCCCTAGTGGCTaGGACTGGTTGGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLRCPSG*DWLAWE
Trigger: CTCCCAGGCCAACCAGTCCAAGCCACTAGGGCACCT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTCCTCATCCTCGAGCCTaGTGTGTGGGAGGCCTAGAG +
Preference number: 5 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAPHPRA*CVGGLE
Trigger: CTCTAGGCCTCCCACACACAAGGCTCGAGGATGAGG...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTATCTTTGGCACTGGATaGTGGAGAACCGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPIFGTG*WRTGFF
Trigger: AAAGAATCCGGTTCTCCACAATCCAGTGCCAAAGAT...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTGCAGAAACAGGTTCTaGCTGGGCCTTCCAACTCAC +
Preference number: 5 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDCRNRF*LGLPTH
Trigger: GTGAGTTGGAAGGCCCAGCAAGAACCTGTTTCTGCA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS TCA 90 bp GTTGTTCTCGGCAATTTTCCAGGCACATCAGGGCCTGACTATTCTTaGCCTGGAAGTCCCCAAGCTCTCCAACATGCCCTTCAACCCTCC +
Preference number: 5 (lower is better)
Translates to: VVLGNFPGTSGPDYS*PGSPQALQHALQPS
Trigger: GGAGGGTTGAAGGGCATGTTGGAGAGCTTGGGGACTTCCAGGTCAAGAATAGTCAGGCCCTGATGTGCCTGGAAAATTGCCGAGAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 90 bp AGAGCAGCTTCAGGCCGTGGTGTCTCCCACGTCTGTGTTCTTATTTaGAGCTCAGGGTTTGCATTCCCAGGTAGAACAGGTGTCGTACAC +
Preference number: 5 (lower is better)
Translates to: RAASGRGVSHVCVLI*SSGFAFPGRTGVVH
Trigger: GTGTACGACACCTGTTCTACCTGGGAATGCAAACCCTGAGCTGCAAATAAGAACACAGACGTGGGAGACACCACGGCCTGAAGCTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS CCA 90 bp AAGCCTGAGGGCTTCCAAGACCTGCTGCATCACTCTTTCAAAGTCTaGGGTTTGGTAGGCTCCCAGGATTTCCCTCAGCAGGCATTTGTG +
Preference number: 5 (lower is better)
Translates to: KPEGFQDLLHHSFKV*GLVGSQDFPQQAFV
Trigger: CACAAATGCCTGCTGAGGGAAATCCTGGGAGCCTACCAAACCCCAGACTTTGAAAGAGTGATGCAGCAGGTCTTGGAAGCCCTCAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 90 bp CTGTACTGTGCCCCATTTCTTCCTGGGAGAAGTTGGTATGGTAGGTaGGGACAGGCTGCTATGAAATGGAAACCAGCCAACCCTGGACCT +
Preference number: 5 (lower is better)
Translates to: LYCAPFLPGRSWYGR*GQAAMKWKPANPGP
Trigger: AGGTCCAGGGTTGGCTGGTTTCCATTTCATAGCAGCCTGTCCCCACCTACCATACCAACTTCTCCCAGGAAGAAATGGGGCACAGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS-3UTR CAA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAAGCATCCCGAAGCGCTaGCGGCGCTCCTCCCGCCTC +
Preference number: 5 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPSIPKR*RRSSRL
Trigger: GAGGCGGGAGGAGCGCCGCAAGCGCTTCGGGATGCT...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTAGGGCCTCAGCACTCTaGAGCTTCTGCTCGCTAGCC +
Preference number: 5 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLRASAL*SFCSLA
Trigger: GGCTAGCGAGCAGAAGCTCAAGAGTGCTGAGGCCCT...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACGGAGAACCGGATTCTTaGCCTTTTAACACCAGGTGC +
Preference number: 5 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDGEPDS*PFNTRC
Trigger: GCACCTGGTGTTAAAAGGCAAAGAATCCGGTTCTCC...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTTCTAGCTGGGCGGCCTaGGCCTTGAGCTCTGCATTC +
Preference number: 5 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLSSWAA*ALSSAF
Trigger: GAATGCAGAGCTCAAGGCCAAGGCCGCCCAGCTAGA...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATCGCCATAAATGGGTTTaGCCTGCGTCAGGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: ITHKPAETHTSTTASLSHRHKWV*PASGPR
Trigger: ACGAGGACCTGACGCAGGCAAAACCCATTTATGGCG...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGTCCCTTCCAGGGTATTaGGATGCCTGCAGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQSLPGY*DACRKE
Trigger: TTCCTTCCTGCAGGCATCCAAATACCCTGGAAGGGA...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTGTGGACACATGCCCTaGCTGAAAGCTGTTTGGCCC +
Preference number: 5 (lower is better)
Translates to: INLQIRDTATSSRPGMSTCGHMP*LKAVWP
Trigger: GGGCCAAACAGCTTTCAGCAAGGGCATGTGTCCACA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GGGAAAGCTCACTACTGTGTAGCTGGTGCCAAGGAGCAGCCTGAGACCCCGCCTTTGTTGAGGAGCCACTaGGATGCTTTCTACCTTTTA +
Preference number: 5 (lower is better)
Translates to: GKAHYCVAGAKEQPETPPLLRSH*DAFYLL
Trigger: TAAAAGGTAGAAAGCATCCAAGTGGCTCCTCAACAA...AGGCGGGGTCTCAGGCTGCTCCTTGGCACCAGCTACACAGTAGTGAGCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGACCTCCTCCGCTCGTaGCCAAACAGACGGGCCACC +
Preference number: 5 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRDLLRS*PNRRAT
Trigger: GGTGGCCCGTCTGTTTGGCAACGAGCGGAGGAGGTC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GCTGCCATGTCGAGGGCCCTACAGCTTGCTTTCAAATGGTTCAGCAGAAAGTGTGTTAGTGCGTGCACATaGCTGGCTCAGCGTAACCCA +
Preference number: 5 (lower is better)
Translates to: AAMSRALQLAFKWFSRKCVSACT*LAQRNP
Trigger: TGGGTTACGCTGAGCCAGCAATGTGCACGCACTAAC...ACACTTTCTGCTGAACCATTTGAAAGCAAGCTGTAGGGCCCTCGACATGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS TCA 90 bp TCGGAAGATGTGCTGCTGGTCCAGGTCTTCTCAGACCCTTCGGGGTaGATGTATCTTTGGCACTGGATTGTGGAGAACCGGATTCTTTGC +
Preference number: 5 (lower is better)
Translates to: SEDVLLVQVFSDPSG*MYLWHWIVENRILC
Trigger: GCAAAGAATCCGGTTCTCCACAATCCAGTGCCAAAGATACATTCACCCCGAAGGGTCTGAGAAGACCTGGACCAGCAGCACATCTTCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 90 bp AGCCTAATTATCTCCACAAGGAAGAGAGGAAACAAGATCAATTCCTaGGACCCCACCTCCCCCAAGAGGCCAGCTGCTTCTCAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: SLIISTRKRGNKINS*DPTSPKRPAASQGV
Trigger: CACTCCCTGAGAAGCAGCTGGCCTCTTGGGGGAGGTGGGGTCTCAGGAATTGATCTTGTTTCCTCTCTTCCTTGTGGAGATAATTAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578521.1
CDS GCA 90 bp AATGGTTCAGCAGAAAGTGTCTTTAACACCTGTGGAGTTAGTGCGTaGACATTGCTGGCTCAGCGTAACCCATCACGGGACCGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: NGSAESVFNTCGVSA*TLLAQRNPSRDRRR
Trigger: TCTCCTCCGGTCCCGTGATGGGTTACGCTGAGCCAGCAATGTGCACGCACTAACTCCACAGGTGTTAAAGACACTTTCTGCTGAACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS-3UTR CAA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAAGGCAGAGATCTCAGTaGTTCTCGGCAATTTTCCAG +
Preference number: 5 (lower is better)
Translates to: AAEQPAVAAVQGRTAISERQRSQ*FSAIFQ
Trigger: CTGGAAAATTGCCGAGAACAACTGAGATCTCTGCCT...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATTACTCGCTCTTCTGCTaGCGGAGAAGCTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYYSLFC*RRSSSY
Trigger: GTATGAGGAGCTTCTCCGCAAGCAGAAGAGCGAGTA...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGCTCCACTGATGGCCTaGCTCATGACTTCATCTAGA +
Preference number: 5 (lower is better)
Translates to: RRPNRITCLCRDLAANRDAPLMA*LMTSSR
Trigger: TCTAGATGAAGTCATGAGCAAGGCCATCAGTGGAGC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp TGTGGGGGACAGCGGGGTCCCGAATGTTCCTTCTGTATATTCCCATTGACACAGAACAGGATTACTTGTTaGTGTAGGGACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: CGGQRGPECSFCIFPLTQNRITC*CRDLAA
Trigger: GGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTT...CTGTGTCAATGGGAATATACAGAAGGAACATTCGGGACCCCGCTGTCCCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAGAAAGTGGGCTCTTTaGCCAGCACTGAGAACCTTC +
Preference number: 5 (lower is better)
Translates to: RRPNRITCLCRDLAANRDRKWAL*PALRTF
Trigger: GAAGGTTCTCAGTGCTGGCAAAAGAGCCCACTTTCT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAAGAACGTTCTGTTGCTaGGCATTGAGAACAGTGGTG +
Preference number: 5 (lower is better)
Translates to: AAEQPAVAAVQGRTAISERTFCC*ALRTVV
Trigger: CACCACTGTTCTCAATGCCAAGCAACAGAACGTTCT...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTGCTGGTCAGGCTTTCTaGAGACACTGGCCTGACAGT +
Preference number: 5 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAAGQAF*RHWPDS
Trigger: ACTGTCAGGCCAGTGTCTCAAGAAAGCCTGACCAGC...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GGCACTCCTGGCTGCAGTCATGGTCTCAGCTGTGGAGATGCCCTTATTCTCCTGCGTCTGTGTTCTTATTaGCAGCTCAGGGTTTGCATT +
Preference number: 5 (lower is better)
Translates to: GTPGCSHGLSCGDALILLRLCSY*QLRVCI
Trigger: AATGCAAACCCTGAGCTGCAAATAAGAACACAGACG...CAGGAGAATAAGGGCATCTCCACAGCTGAGACCATGACTGCAGCCAGGAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS CCA 90 bp GCCCCAGCAGATTCCATCGGTGGCTGTCCTGACCAAGAAATCTCATaGAGCATTCGGGAGACATCTGATGTTGTGTTCTTCAGGGAATCT +
Preference number: 5 (lower is better)
Translates to: APADSIGGCPDQEIS*SIRETSDVVFFRES
Trigger: AGATTCCCTGAAGAACACAACATCAGATGTCTCCCGAATGCTCCATGAGATTTCTTGGTCAGGACAGCCACCGATGGAATCTGCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS-3UTR CAA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTCTCACGGTCACGTCTTaGAGCTTTTCCTCTGTGACG +
Preference number: 5 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTALTVTS*SFSSVT
Trigger: CGTCACAGAGGAAAAGCTCAAAGACGTGACCGTGAG...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATTCACTTGCGTACTTCTaGTCCCGCAGTGCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDSLAYF*SRSAVC
Trigger: GCAGACGGCACTGCGGGACAAGAAGTACGCAAGTGA...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACAAGAGCCTTAAAAACTaGTGGAAAGGGCTCGATGCC +
Preference number: 5 (lower is better)
Translates to: RRPNRITCLCRDLAANRDKSLKN*WKGLDA
Trigger: GGCATCGAGCCCTTTCCACAAGTTTTTAAGGCTCTT...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATGGAACCCAGACTTCCTaGACCCAGATGGTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDGTQTS*TQMVAV
Trigger: GACAGCCACCATCTGGGTCAAGGAAGTCTGGGTTCC...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CCTCAGTCCGTTTCCTGGCAATACCCTACACTAAACCAGCCTCTGGGGAGAGACTTCAAGCCATCAGTTTaGTTTCCGGCCTTATCTGTC +
Preference number: 5 (lower is better)
Translates to: PQSVSWQYPTLNQPLGRDFKPSV*FPALSV
Trigger: GACAGATAAGGCCGGAAACAAAACTGATGGCTTGAA...GTCTCTCCCCAGAGGCTGGTTTAGTGTAGGGTATTGCCAGGAAACGGACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS GCA 90 bp CTGCTCCCCAAGGCAACCATTTTAACCAAAGCCTCATTGAGGTCCTaGTCCTTCTTCTCCAGAACCTTCTCATGTGCTTCCTTAATGCGC +
Preference number: 5 (lower is better)
Translates to: LLPKATILTKASLRS*SFFSRTFSCASLMR
Trigger: GCGCATTAAGGAAGCACATGAGAAGGTTCTGGAGAAGAAGGAGCAGGACCTCAATGAGGCTTTGGTTAAAATGGTTGCCTTGGGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 90 bp ATTCGGGAGACATCTGATGTTGTGTTCTTCAGGGAATCTGCTATCTaGCTGATCAGCGAGGCCTCCAGAGCAATCTGGTCAGAAAGAAGC +
Preference number: 5 (lower is better)
Translates to: IRETSDVVFFRESAI*LISEASRAIWSERS
Trigger: GCTTCTTTCTGACCAGATTGCTCTGGAGGCCTCGCTGATCAGCCAGATAGCAGATTCCCTGAAGAACACAACATCAGATGTCTCCCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS-3UTR CAA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATCTCACTTTGAAGGTCTaGGTTGACTCTATGGAGCCT +
Preference number: 5 (lower is better)
Translates to: ITHKPAETHTSTTASLSHLTLKV*VDSMEP
Trigger: AGGCTCCATAGAGTCAACCAAGACCTTCAAAGTGAG...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGGCTTCAAGCTCACTTaGAAGGTCTTGGTTGACTCT +
Preference number: 5 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYGFKLT*KVLVDS
Trigger: AGAGTCAACCAAGACCTTCAAAGTGAGCTTGAAGCC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTTTAACCAAAGCCTCATaGAGGTCCTGCTCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPLTKAS*RSCSFF
Trigger: GAAGAAGGAGCAGGACCTCAATGAGGCTTTGGTTAA...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGGGGTGAATGTATCTTaGGCACTGGATTGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYGVNVS*ALDCGE
Trigger: TTCTCCACAATCCAGTGCCAAAGATACATTCACCCC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATGGGAGACATCTGATGTaGTGTTCTTCAGGGAATCTG +
Preference number: 5 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYGRHLM*CSSGNL
Trigger: CAGATTCCCTGAAGAACACAACATCAGATGTCTCCC...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTGCTCCACTGATGGCCTaGCTCATGACTTCATCTAGA +
Preference number: 5 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAAPLMA*LMTSSR
Trigger: TCTAGATGAAGTCATGAGCAAGGCCATCAGTGGAGC...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCAGAAGAATCAAATGCTCTTTaGTCCTATGGGCAAACTTGC +
Preference number: 5 (lower is better)
Translates to: AAEQPAVAAVQGRTAISEESNAL*SYGQTC
Trigger: GCAAGTTTGCCCATAGGACAAAAGAGCATTTGATTC...TTCTGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAGGAACCCAGACTTCCTaGACCCAGATGGTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRGTQTS*TQMVAV
Trigger: GACAGCCACCATCTGGGTCAAGGAAGTCTGGGTTCC...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGATCAGTGTGGCACCAGTaGGGCAGCCGTCAACATCTG +
Preference number: 5 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRSVWHQ*GSRQHL
Trigger: CAGATGTTGACGGCTGCCCAACTGGTGCCACACTGA...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACTCCGATGTTACCTCTaGTTCAATAAACCTGCAAAT +
Preference number: 5 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISLRCYL*FNKPAN
Trigger: ATTTGCAGGTTTATTGAACAAGAGGTAACATCGGAG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GTATATGGCACCTCCAAGCCTGAAGTCCGTGGAAAACCCACGTTCAGCTGCTATCTTCTGCCTTCATACTaGCTGAATCCGAAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: VYGTSKPEVRGKPTFSCYLLPSY*LNPKAR
Trigger: TCTTGCCTTCGGATTCAGCAAGTATGAAGGCAGAAG...ATAGCAGCTGAACGTGGGTTTTCCACGGACTTCAGGCTTGGAGGTGCCATATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGAGGGGAAACGAAACGTaGTCTCTGGCCTGTGTCACC +
Preference number: 5 (lower is better)
Translates to: KLVERARCQWRALSYFSERGNET*SLACVT
Trigger: GGTGACACAGGCCAGAGACAACGTTTCGTTTCCCCT...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTAAGGAAGAAGTGTGCTaGTATATGGCACCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: INLQIRDTATSSRPGMSTKEEVC*YMAPPS
Trigger: GCTTGGAGGTGCCATATACAAGCACACTTCTTCCTT...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp ATTACCCACAAGCCTGCAGAAACTCACACGAGCACAACTGCCTCGCTTTCCCATAGAACGTTCTGTTGCTaGGCATTGAGAACAGTGGTG +
Preference number: 5 (lower is better)
Translates to: ITHKPAETHTSTTASLSHRTFCC*ALRTVV
Trigger: CACCACTGTTCTCAATGCCAAGCAACAGAACGTTCT...ATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTTCTGCAGGCTTGTGGGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS TCA 90 bp CAGCCAAAGATAGTCCACGCCAGTGGTCCTCAAACATGCTGCTGTTaGAATCCCTTCACACTCTTAAAAACTGGTGGCCCTAGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: QPKIVHASGPQTCCC*NPFTLLKTGGPRRA
Trigger: AGCTCTTCTAGGGCCACCAGTTTTTAAGAGTGTGAAGGGATTTCAACAGCAGCATGTTTGAGGACCACTGGCGTGGACTATCTTTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581955.1
CDS CCA 90 bp CACCACCATCTGTCCCTGTATCCAGCCAAAGATAGTCCACGCCAGTaGTCCTCAAACATGCTGCTGTTGAAATCCCTTCACACTCTTAAA +
Preference number: 5 (lower is better)
Translates to: HHHLSLYPAKDSPRQ*SSNMLLLKSLHTLK
Trigger: TTTAAGAGTGTGAAGGGATTTCAACAGCAGCATGTTTGAGGACCACTGGCGTGGACTATCTTTGGCTGGATACAGGGACAGATGGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581955.1
CDS-3UTR CAA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAAGGTCGCCCTTGAGCTaGGCCAGCGCCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PLGCFLPFINCTLGKPHERSPLS*ASACSL
Trigger: CAAGGAGCAGGCGCTGGCCAAGCTCAAGGGCGACCT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGACGCCATAAATGGGTTTaGCCTGCGTCAGGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRRHKWV*PASGPR
Trigger: ACGAGGACCTGACGCAGGCAAAACCCATTTATGGCG...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTAAGAGCCTTAAAAACTaGTGGAAAGGGCTCGATGCC +
Preference number: 5 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTAKSLKN*WKGLDA
Trigger: GGCATCGAGCCCTTTCCACAAGTTTTTAAGGCTCTT...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp AGGAGGCCAAACAGGATTACTTGTTTGTGTAGGGACCTGGCTGCCAACAGGGACGAATCAAATGCTCTTTaGTCCTATGGGCAAACTTGC +
Preference number: 5 (lower is better)
Translates to: RRPNRITCLCRDLAANRDESNAL*SYGQTC
Trigger: GCAAGTTTGCCCATAGGACAAAAGAGCATTTGATTC...GTCCCTGTTGGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTTTGGCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTTCAAGCCATCAGTTTaGTTTCCGGCCTTATCTGTC +
Preference number: 5 (lower is better)
Translates to: INLQIRDTATSSRPGMSTFKPSV*FPALSV
Trigger: GACAGATAAGGCCGGAAACAAAACTGATGGCTTGAA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GTGGCTGCAGAACAACCTGCCGTAGCTGCTGTGCAAGGAAGAACGGCCATCTCACAAGAGCCTTTTCTTTaGTTGAAGGATTTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: VAAEQPAVAAVQGRTAISQEPFL*LKDFRE
Trigger: TTCTCTGAAATCCTTCAACAAAAGAAAAGGCTCTTG...TGAGATGGCCGTTCTTCCTTGCACAGCAGCTACGGCAGGTTGTTCTGCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS TCA 90 bp CGCATAGCAAACCTGGGCCTGAATAATGGCATCCTGAACCAACAATaGAGAATACTGACCGAGGCCTCCCAAACAAGTGTTATACGAGAG +
Preference number: 5 (lower is better)
Translates to: RIANLGLNNGILNQQ*RILTEASQTSVIRE
Trigger: CTCTCGTATAACACTTGTTTGGGAGGCCTCGGTCAGTATTCTTCATTGTTGGTTCAGGATGCCATTATTCAGGCCCAGGTTTGCTATGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS TCA 90 bp CCTCTTCCTGTCCTTCAACATGAGAACATTCGTGCATCATATATGTaGGCTCCACGTTTCATTTCAAGGGGGTGGGTGTTTTGCTGCGTC +
Preference number: 5 (lower is better)
Translates to: PLPVLQHENIRASYM*APRFISRGWVFCCV
Trigger: GACGCAGCAAAACACCCACCCCCTTGAAATGAAACGTGGAGCTCACATATATGATGCACGAATGTTCTCATGTTGAAGGACAGGAAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS-3UTR CAA 90 bp GTGGTGGACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAACTGAAGTCTATCTATTaGAACTTCTTCCTCATCGGT +
Preference number: 5 (lower is better)
Translates to: VVDLRERHKIVAPRHEAKLKSIY*NFFLIG
Trigger: ACCGATGAGGAAGAAGTTCAAATAGATAGACTTCAG...TTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTCCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp AAACTCACACGAGCACAACTGCCTCGCTTTCCCATTCATATGTGTGGCACAGCTAGAATGAACAGGGTCTaGTCCCTGGCAGACAAAATT +
Preference number: 5 (lower is better)
Translates to: KLTRAQLPRFPIHMCGTARMNRV*SLADKI
Trigger: AATTTTGTCTGCCAGGGACAAGACCCTGTTCATTCT...AGCTGTGCCACACATATGAATGGGAAAGCGAGGCAGTTGTGCTCGTGTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAACTCACTGGCGCCCAGTaGCTGGCTGAGGTCGGCAAT +
Preference number: 5 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQLTGAQ*LAEVGN
Trigger: ATTGCCGACCTCAGCCAGCAACTGGGCGCCAGTGAG...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTGAGAAGCAAGAATACTaGAAGCTCACAGTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPEKQEY*KLTVLK
Trigger: TTTCAGAACTGTGAGCTTCAAGTATTCTTGCTTCTC...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGTTTGCCAGGACTCCTaGCAGAGCTGGAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEVCQDS*QSWSSF
Trigger: GAAGGAGCTCCAGCTCTGCAAGGAGTCCTGGCAAAC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAAGGGCTGATCCCAGCTaGCAGGGAAGGGGAAACGAA +
Preference number: 5 (lower is better)
Translates to: PLGCFLPFINCTLGKPHERADPS*QGRGNE
Trigger: TTCGTTTCCCCTTCCCTGCAAGCTGGGATCAGCCCT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATAGAATGAACAGGGTCTaGTCCCTGGCAGACAAAATT +
Preference number: 5 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDRMNRV*SLADKI
Trigger: AATTTTGTCTGCCAGGGACAAGACCCTGTTCATTCT...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GACCTCAGAGAACGGCACAAAATCGTAGCACCCAGACACGAGGCAAAAACTCCTTTAAATACAGAGAAATaGCAAGCTACACCAAGCATG +
Preference number: 5 (lower is better)
Translates to: DLRERHKIVAPRHEAKTPLNTEK*QATPSM
Trigger: CATGCTTGGTGTAGCTTGCAATTTCTCTGTATTTAA...AGGAGTTTTTGCCTCGTGTCTGGGTGCTACGATTTTGTGCCGTTCTCTGAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp ATAAACCTGCAAATTCGCGATACTGCCACCTCTAGTCGCCCTGGGATGTCCACTTTAAATACAGAGAAATaGCAAGCTACACCAAGCATG +
Preference number: 5 (lower is better)
Translates to: INLQIRDTATSSRPGMSTLNTEK*QATPSM
Trigger: CATGCTTGGTGTAGCTTGCAATTTCTCTGTATTTAA...AGTGGACATCCCAGGGCGACTAGAGGTGGCAGTATCGCGAATTTGCAGGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGGCTCTTCCATGTCCTTaGGAGATTCACTTGCAAATT +
Preference number: 5 (lower is better)
Translates to: KLVERARCQWRALSYFSEALPCP*EIHLQI
Trigger: AATTTGCAAGTGAATCTCCAAAGGACATGGAAGAGC...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAGCACTTCCACTGACTTaGGGGGCACCATGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEALPLT*GAPCCL
Trigger: AAGACAGCATGGTGCCCCCAAAGTCAGTGGAAGTGC...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAAGGGGAAACGAAACGTaGTCTCTGGCCTGTGTCACC +
Preference number: 5 (lower is better)
Translates to: PLGCFLPFINCTLGKPHERGNET*SLACVT
Trigger: GGTGACACAGGCCAGAGACAACGTTTCGTTTCCCCT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp AAACTTGTGGAAAGGGCTCGATGCCAGTGGAGAGCACTTAGTTATTTCAGTGAGCTGAAGTCTATCTATTaGAACTTCTTCCTCATCGGT +
Preference number: 5 (lower is better)
Translates to: KLVERARCQWRALSYFSELKSIY*NFFLIG
Trigger: ACCGATGAGGAAGAAGTTCAAATAGATAGACTTCAG...CTCACTGAAATAACTAAGTGCTCTCCACTGGCATCGAGCCCTTTCCACAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp TTCTGTTGCTTGGCATTGAGAACAGTGGTGGCCTTCACCTTTCGATGTGAAGATCTCCGATGTTACCTCTaGTTCAATAAACCTGCAAAT +
Preference number: 5 (lower is better)
Translates to: FCCLALRTVVAFTFRCEDLRCYL*FNKPAN
Trigger: ATTTGCAGGTTTATTGAACAAGAGGTAACATCGGAG...ATCTTCACATCGAAAGGTGAAGGCCACCACTGTTCTCAATGCCAAGCAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CTGCCTTCATACTTGCTGAATCCGAAGGCAAGATCCTCTCCGATGTTACCTCTTCAAGAGCCTTTTCTTTaGTTGAAGGATTTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: LPSYLLNPKARSSPMLPLQEPFL*LKDFRE
Trigger: TTCTCTGAAATCCTTCAACAAAAGAAAAGGCTCTTG...AAGAGGTAACATCGGAGAGGATCTTGCCTTCGGATTCAGCAAGTATGAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATGCAGAAACAGGTTCTaGCTGGGCCTTCCAACTCAC +
Preference number: 5 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQCRNRF*LGLPTH
Trigger: GTGAGTTGGAAGGCCCAGCAAGAACCTGTTTCTGCA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAATTCAAAGTCTGGGGTTaGGTAGGCTCCCAGGATTTC +
Preference number: 5 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQFKVWG*VGSQDF
Trigger: GAAATCCTGGGAGCCTACCAAACCCCAGACTTTGAA...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651222.2
CDS-3UTR CAA 90 bp CAACCAAGTCTCCCTAGGATAGCGTTAAATTACTGTGCAGAAGTCTGGTCAAGAAAACCCAATTTTCTCTaGCTGTTAACAACACTGAAG +
Preference number: 5 (lower is better)
Translates to: QPSLPRIALNYCAEVWSRKPNFL*LLTTLK
Trigger: CTTCAGTGTTGTTAACAGCAAGAGAAAATTGGGTTT...TCTTGACCAGACTTCTGCACAGTAATTTAACGCTATCCTAGGGAGACTTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GGTGCGAAAACAGTGGGTAGATACCTTAATTCTAAGGAACTTTTTAATAAGCAAAACAGGATTACTTGTTaGTGTAGGGACCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GAKTVGRYLNSKELFNKQNRITC*CRDLAA
Trigger: GGCAGCCAGGTCCCTACACAAACAAGTAATCCTGTT...TTGCTTATTAAAAAGTTCCTTAGAATTAAGGTATCTACCCACTGTTTTCGCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAAAAGGAAGAAGTGTGCTaGTATATGGCACCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: PLGCFLPFINCTLGKPHEKEEVC*YMAPPS
Trigger: GCTTGGAGGTGCCATATACAAGCACACTTCTTCCTT...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAGAGAAGCAAGAATACTaGAAGCTCACAGTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPEKQEY*KLTVLK
Trigger: TTTCAGAACTGTGAGCTTCAAGTATTCTTGCTTCTC...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp GGATTGTGTTCAGTTTTCAGCATGTTTCCATGTACCCAAAAGTTAAGAGTCCCAAAACCCAATTTTCTCTaGCTGTTAACAACACTGAAG +
Preference number: 5 (lower is better)
Translates to: GLCSVFSMFPCTQKLRVPKPNFL*LLTTLK
Trigger: CTTCAGTGTTGTTAACAGCAAGAGAAAATTGGGTTT...TGGGACTCTTAACTTTTGGGTACATGGAAACATGCTGAAAACTGAACACAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS-3UTR CAA 90 bp CCACTTGGATGCTTTCTACCTTTTATAAATTGTACCCTAGGAAAACCACATGAATTGTTGAGGAGCCACTaGGATGCTTTCTACCTTTTA +
Preference number: 5 (lower is better)
Translates to: PLGCFLPFINCTLGKPHELLRSH*DAFYLL
Trigger: TAAAAGGTAGAAAGCATCCAAGTGGCTCCTCAACAA...TTCATGTGGTTTTCCTAGGGTACAATTTATAAAAGGTAGAAAGCATCCAAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395811.9
ENST00000651222.2
CDS GCA 72 bp CATCCCGAAGCGCTTGCGGCGCTCCTCCCGCCTCCGTaGACGCTCCCGCTCCAGCTCCCCAGGCTCCGCCTC +
Preference number: 6 (lower is better)
Translates to: HPEALAALLPPP*TLPLQLPRLRL
Trigger: GAGGCGGAGCCTGGGGAGCTGGAGCGGGAGCGTGCACGGAGGCGGGAGGAGCGCCGCAAGCGCTTCGGGATG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313485.10
ENST00000341712.8
ENST00000395811.9
ENST00000584067.5
ENST00000651222.2
CDS GCA 72 bp GCCAGTGCGCCAACCTGGAGCAGGCTGGCGCGGAGCTaGTCACGCAGCTGGGCCTCGGTGCCCGCCCACTGG +
Preference number: 6 (lower is better)
Translates to: ASAPTWSRLARS*SRSWASVPAHW
Trigger: CCAGTGGGCGGGCACCGAGGCCCAGCTGCGTGAGCAGCTCCGCGCCAGCCTGCTCCAGGTTGGCGCACTGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp CTCAGCGCCGCCTCGCTGTGTTGCCGCTCCTCCAGCTaGTCGCGGACCCGGCCCTGCTCCCGCTTCAGGTCG +
Preference number: 6 (lower is better)
Translates to: LSAASLCCRSSS*SRTRPCSRFRS
Trigger: CGACCTGAAGCGGGAGCAGGGCCGGGTCCGCGAGCAGCTGGAGGAGCGGCAACACAGCGAGGCGGCGCTGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 72 bp GGCTGGCGCGGAGCTGCTCACGCAGCTGGGCCTCGGTaGCCGCCCACTGGTGGTGCAGTGCGAGCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: GWRGAAHAAGPR*PPTGGAVRAVP
Trigger: AGGCACTGCTCGCACTGCACCACCAGTGGGCGGGCACCGAGGCCCAGCTGCGTGAGCAGCTCCGCGCCAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp ACCTGGAGCAGGCTGGCGCGGAGCTGCTCACGCAGCTaGGCCTCGGTGCCCGCCCACTGGTGGTGCAGTGCG +
Preference number: 6 (lower is better)
Translates to: TWSRLARSCSRS*ASVPAHWWCSA
Trigger: CGCACTGCACCACCAGTGGGCGGGCACCGAGGCCCAGCTGCGTGAGCAGCTCCGCGCCAGCCTGCTCCAGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp CCAGCTGGGAGGCCAGTGCGCCAACCTGGAGCAGGCTaGCGCGGAGCTGCTCACGCAGCTGGGCCTCGGTGC +
Preference number: 6 (lower is better)
Translates to: PAGRPVRQPGAG*RGAAHAAGPRC
Trigger: GCACCGAGGCCCAGCTGCGTGAGCAGCTCCGCGCCAGCCTGCTCCAGGTTGGCGCACTGGCCTCCCAGCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 90 bp CTGCTCGCTAGCCCTCAGCTGGCTGCTCAGCGCCGCCTCGCTGTGTaGCCGCTCCTCCAGCTGCTCGCGGACCCGGCCCTGCTCCCGCTT +
Preference number: 6 (lower is better)
Translates to: LLASPQLAAQRRLAV*PLLQLLADPALLPL
Trigger: AAGCGGGAGCAGGGCCGGGTCCGCGAGCAGCTGGAGGAGCGGCAACACAGCGAGGCGGCGCTGAGCAGCCAGCTGAGGGCTAGCGAGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp ACCTGTCTCCAGCTGTGCACGGGCCCCGCCATGGGCTaGGGCCGGCCAGTGCTGCAGGGCTTGGATGGCGCT +
Preference number: 6 (lower is better)
Translates to: TCLQLCTGPAMG*GRPVLQGLDGA
Trigger: AGCGCCATCCAAGCCCTGCAGCACTGGCCGGCCCCAGCCCATGGCGGGGCCCGTGCACAGCTGGAGACAGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp AAAGGTCTTGGAGCGGCCCTCTCGCCTCCGCTCCCGTaGGCGGCTCCTCTTCTGCTCAGGGTCCGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: KGLGAALSPPLP*AAPLLLRVRLP
Trigger: GGGGAGCCGGACCCTGAGCAGAAGAGGAGCCGCGCACGGGAGCGGAGGCGAGAGGGCCGCTCCAAGACCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313485.10
ENST00000341712.8
ENST00000395811.9
ENST00000581955.1
ENST00000584067.5
ENST00000651222.2
CDS GCA 72 bp GCGAGCCTGCGCACGCTGGCCTCTCGTGCCTCCAGCTaGTCCTCCAGCTGGTGCACCTGCTCACTGCCCTCG +
Preference number: 6 (lower is better)
Translates to: ASLRTLASRASS*SSSWCTCSLPS
Trigger: CGAGGGCAGTGAGCAGGTGCACCAGCTGGAGGAGCAGCTGGAGGCACGAGAGGCCAGCGTGCGCAGGCTCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp CCGCCATGGGCTGGGGCCGGCCAGTGCTGCAGGGCTTaGATGGCGCTGACGAGTGCACTCTCCACACTGGCC +
Preference number: 6 (lower is better)
Translates to: PPWAGAGQCCRA*MALTSALSTLA
Trigger: GGCCAGTGTGGAGAGTGCACTCGTCAGCGCCATCCAAGCCCTGCAGCACTGGCCGGCCCCAGCCCATGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 72 bp CCCGCCATGGGCTGGGGCCGGCCAGTGCTGCAGGGCTaGGATGGCGCTGACGAGTGCACTCTCCACACTGGC +
Preference number: 6 (lower is better)
Translates to: PAMGWGRPVLQG*DGADECTLHTG
Trigger: GCCAGTGTGGAGAGTGCACTCGTCAGCGCCATCCAAGCCCTGCAGCACTGGCCGGCCCCAGCCCATGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 90 bp TCCAGCTGCTCGCGGACCCGGCCCTGCTCCCGCTTCAGGTCGCCCTaGAGCTTGGCCAGCGCCTGCTCCTTGATGGCTAGCTCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: SSCSRTRPCSRFRSP*SLASACSLMASSAA
Trigger: GGCCGCTGAGCTAGCCATCAAGGAGCAGGCGCTGGCCAAGCTCAAGGGCGACCTGAAGCGGGAGCAGGGCCGGGTCCGCGAGCAGCTGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 72 bp GCCGCTGCGCCTGCTCACTGGCGCCCAGTTGCTGGCTaGGGTCGGCAATGCGCTCCTGCAGCCTCTGGACCT +
Preference number: 6 (lower is better)
Translates to: AAAPAHWRPVAG*GRQCAPAASGP
Trigger: AGGTCCAGAGGCTGCAGGAGCGCATTGCCGACCTCAGCCAGCAACTGGGCGCCAGTGAGCAGGCGCAGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 72 bp GCGCCCAGTTGCTGGCTGAGGTCGGCAATGCGCTCCTaGAGCCTCTGGACCTCCTTCTGCCGGTCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: APSCWLRSAMRS*SLWTSFCRSRC
Trigger: GCAGCGGGACCGGCAGAAGGAGGTCCAGAGGCTGCAGGAGCGCATTGCCGACCTCAGCCAGCAACTGGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 72 bp CTCGGTGCCCGCCCACTGGTGGTGCAGTGCGAGCAGTaGCTCACGGCTCTGACCCTGCTGGCTCTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: LGARPLVVQCEQ*LTALTLLALQP
Trigger: AGGCTGGAGAGCCAGCAGGGTCAGAGCCGTGAGGCACTGCTCGCACTGCACCACCAGTGGGCGGGCACCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp CGGCCAGTGCTGCAGGGCTTGGATGGCGCTGACGAGTaGACTCTCCACACTGGCCAGGGAGGCTGCGCGTGC +
Preference number: 6 (lower is better)
Translates to: RPVLQGLDGADE*TLHTGQGGCAC
Trigger: GCACGCGCAGCCTCCCTGGCCAGTGTGGAGAGTGCACTCGTCAGCGCCATCCAAGCCCTGCAGCACTGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp TGCTGGCTGAGGTCGGCAATGCGCTCCTGCAGCCTCTaGACCTCCTTCTGCCGGTCCCGCTGCAGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: CWLRSAMRSCSL*TSFCRSRCSAC
Trigger: GCAGGCGCTGCAGCGGGACCGGCAGAAGGAGGTCCAGAGGCTGCAGGAGCGCATTGCCGACCTCAGCCAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp TGCCGCAGGGCCGTCTGGGTGCCCCGCAGGGTCTCCTaGATGCTCTGTAGCCTGCGGTGGAACGACTCCCTC +
Preference number: 6 (lower is better)
Translates to: CRRAVWVPRRVS*MLCSLRWNDSL
Trigger: GAGGGAGTCGTTCCACCGCAGGCTACAGAGCATCCAGGAGACCCTGCGGGGCACCCAGACGGCCCTGCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp CTCTGGACCTCCTTCTGCCGGTCCCGCTGCAGCGCCTaGTGTGTCTCCAGGCCCCGTAGCTCCTGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: LWTSFCRSRCSA*CVSRPRSSCVF
Trigger: GAAGACGCAGGAGCTACGGGGCCTGGAGACACAGCAGGCGCTGCAGCGGGACCGGCAGAAGGAGGTCCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 72 bp TCCATCAGCCGCTGCGCCTGCTCACTGGCGCCCAGTTaGTGGCTGAGGTCGGCAATGCGCTCCTGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: SISRCACSLAPS*WLRSAMRSCSL
Trigger: GAGGCTGCAGGAGCGCATTGCCGACCTCAGCCAGCAACTGGGCGCCAGTGAGCAGGCGCAGCGGCTGATGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 72 bp GCTCGTCACAGAGGCTCTGCACGTGCTCTGCGAGCCTaGGCACGCTGGCCTCTCGTGCCTCCAGCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: ARHRGSARALRA*ARWPLVPPAAP
Trigger: AGGAGCAGCTGGAGGCACGAGAGGCCAGCGTGCGCAGGCTCGCAGAGCACGTGCAGAGCCTCTGTGACGAGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 72 bp CGCTGTCTGAGGAGGTCCCGCTCGTCACAGAGGCTCTaGACGTGCTCTGCGAGCCTGCGCACGCTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: RCLRRSRSSQRL*TCSASLRTLAS
Trigger: AGAGGCCAGCGTGCGCAGGCTCGCAGAGCACGTGCAGAGCCTCTGTGACGAGCGGGACCTCCTCAGACAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 72 bp GCAGGGCCGTCTGGGTGCCCCGCAGGGTCTCCTGGATaGTCTGTAGCCTGCGGTGGAACGACTCCCTCACTG +
Preference number: 6 (lower is better)
Translates to: AGPSGCPAGSPG*SVACGGTTPSL
Trigger: CAGTGAGGGAGTCGTTCCACCGCAGGCTACAGAGCATCCAGGAGACCCTGCGGGGCACCCAGACGGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp TCATACTCCTCCCTCAGGGCCCGGGCTGCCTGTGCCTaGTCTGAGCAGGAGGGCTCCCGGGTTTGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: SYSSLRARAACA*SEQEGSRVCQD
Trigger: GTCCTGGCAAACCCGGGAGCCCTCCTGCTCAGAGCAGGCACAGGCAGCCCGGGCCCTGAGGGAGGAGTATGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp GCTGGCTCAGGACCCGGCTGCGCTCAGCCTGCAGTGTaGTCTCGGTCCTGGTCAGCTGCTCCACCACACACC +
Preference number: 6 (lower is better)
Translates to: AGSGPGCAQPAV*SRSWSAAPPHT
Trigger: GGTGTGTGGTGGAGCAGCTGACCAGGACCGAGAGCACACTGCAGGCTGAGCGCAGCCGGGTCCTGAGCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp GCATCCAGCTGGCTCAGGACCCGGCTGCGCTCAGCCTaGAGTGTGCTCTCGGTCCTGGTCAGCTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: ASSWLRTRLRSA*SVLSVLVSCST
Trigger: GGTGGAGCAGCTGACCAGGACCGAGAGCACACTGCAGGCTGAGCGCAGCCGGGTCCTGAGCCAGCTGGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp ATCAGCCGCTGCGCCTGCTCACTGGCGCCCAGTTGCTaGCTGAGGTCGGCAATGCGCTCCTGCAGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: ISRCACSLAPSC*LRSAMRSCSLW
Trigger: CCAGAGGCTGCAGGAGCGCATTGCCGACCTCAGCCAGCAACTGGGCGCCAGTGAGCAGGCGCAGCGGCTGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp AGAGGCTCTGCACGTGCTCTGCGAGCCTGCGCACGCTaGCCTCTCGTGCCTCCAGCTGCTCCTCCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: RGSARALRACAR*PLVPPAAPPAG
Trigger: ACCAGCTGGAGGAGCAGCTGGAGGCACGAGAGGCCAGCGTGCGCAGGCTCGCAGAGCACGTGCAGAGCCTCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CAA 72 bp CTCCATCAGCCGCTGCGCCTGCTCACTGGCGCCCAGTaGCTGGCTGAGGTCGGCAATGCGCTCCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: LHQPLRLLTGAQ*LAEVGNALLQP
Trigger: AGGCTGCAGGAGCGCATTGCCGACCTCAGCCAGCAACTGGGCGCCAGTGAGCAGGCGCAGCGGCTGATGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp ACGCTGGCCTCTCGTGCCTCCAGCTGCTCCTCCAGCTaGTGCACCTGCTCACTGCCCTCGAAAGTGGCGCTC +
Preference number: 6 (lower is better)
Translates to: TLASRASSCSSS*CTCSLPSKVAL
Trigger: GAGCGCCACTTTCGAGGGCAGTGAGCAGGTGCACCAGCTGGAGGAGCAGCTGGAGGCACGAGAGGCCAGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp TCCTCGTCGGACGTGGCCACGCGCTCTGTCAGCTCCTaGAACCGCTGTCTGAGGAGGTCCCGCTCGTCACAG +
Preference number: 6 (lower is better)
Translates to: SSSDVATRSVSS*NRCLRRSRSSQ
Trigger: CTGTGACGAGCGGGACCTCCTCAGACAGCGGTTCCAGGAGCTGACAGAGCGCGTGGCCACGTCCGACGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp TCCCTCAGCAGGCATTTGTGCTGCCGCAGGGCCGTCTaGGTGCCCCGCAGGGTCTCCTGGATGCTCTGTAGC +
Preference number: 6 (lower is better)
Translates to: SLSRHLCCRRAV*VPRRVSWMLCS
Trigger: GCTACAGAGCATCCAGGAGACCCTGCGGGGCACCCAGACGGCCCTGCGGCAGCACAAATGCCTGCTGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp CCGCCCCCTAGTGCTGCCAGAGTCCACGTAGGCAGGTaGCTGGCTGGCCACATCCAGGGAGCTGAGGGAGAT +
Preference number: 6 (lower is better)
Translates to: PPPSAARVHVGR*LAGHIQGAEGD
Trigger: ATCTCCCTCAGCTCCCTGGATGTGGCCAGCCAGCCACCTGCCTACGTGGACTCTGGCAGCACTAGGGGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000466186.2
ENST00000651222.2
CDS CAA 90 bp TGGCCTGGCGGGCACCGGGCTGGGAGCCTCTCAACCCACAGTGGGTaGGGGGTACATAGAGTCCACTTCTGGGAGCTGGGGGTTGGGACT +
Preference number: 6 (lower is better)
Translates to: WPGGHRAGSLSTHSG*GVHRVHFWELGVGT
Trigger: AGTCCCAACCCCCAGCTCCCAGAAGTGGACTCTATGTACCCCCAACCCACTGTGGGTTGAGAGGCTCCCAGCCCGGTGCCCGCCAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS TCA 72 bp ATGGCTAGCTCAGCGGCCGCATTGCTGAGCCGTGCCTaGAGGCTCCGGATCTCAGCCTCGTGGTGCCGGATC +
Preference number: 6 (lower is better)
Translates to: MASSAAALLSRA*RLRISASWCRI
Trigger: GATCCGGCACCACGAGGCTGAGATCCGGAGCCTTCAGGCACGGCTCAGCAATGCGGCCGCTGAGCTAGCCAT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 72 bp CACTGGTGGTGCAGTGCGAGCAGTGCCTCACGGCTCTaGCCCTGCTGGCTCTCCAGCCTCACGGTCACGTCT +
Preference number: 6 (lower is better)
Translates to: HWWCSASSASRL*PCWLSSLTVTS
Trigger: AGACGTGACCGTGAGGCTGGAGAGCCAGCAGGGTCAGAGCCGTGAGGCACTGCTCGCACTGCACCACCAGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp TCCCGCTTCAGGTCGCCCTTGAGCTTGGCCAGCGCCTaGTCCTTGATGGCTAGCTCAGCGGCCGCATTGCTG +
Preference number: 6 (lower is better)
Translates to: SRFRSPLSLASA*SLMASSAAALL
Trigger: CAGCAATGCGGCCGCTGAGCTAGCCATCAAGGAGCAGGCGCTGGCCAAGCTCAAGGGCGACCTGAAGCGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp TCAGCACTCTTGAGCTTCTGCTCGCTAGCCCTCAGCTaGCTGCTCAGCGCCGCCTCGCTGTGTTGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: SALLSFCSLALS*LLSAASLCCRS
Trigger: GGAGCGGCAACACAGCGAGGCGGCGCTGAGCAGCCAGCTGAGGGCTAGCGAGCAGAAGCTCAAGAGTGCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp GCTTTTCCCGGAGCTCAGCCACATCCTCGTCGGACGTaGCCACGCGCTCTGTCAGCTCCTGGAACCGCTGTC +
Preference number: 6 (lower is better)
Translates to: AFPGAQPHPRRT*PRALSAPGTAV
Trigger: GACAGCGGTTCCAGGAGCTGACAGAGCGCGTGGCCACGTCCGACGAGGATGTGGCTGAGCTCCGGGAAAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp CCCGGCTGCGCTCAGCCTGCAGTGTGCTCTCGGTCCTaGTCAGCTGCTCCACCACACACCGAATCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PGCAQPAVCSRS*SAAPPHTESPP
Trigger: AGGAGGAGATTCGGTGTGTGGTGGAGCAGCTGACCAGGACCGAGAGCACACTGCAGGCTGAGCGCAGCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp TCCATGTCCTGCCTGTCTCTGACCGAGGCATCCAGCTaGCTCAGGACCCGGCTGCGCTCAGCCTGCAGTGTG +
Preference number: 6 (lower is better)
Translates to: SMSCLSLTEASS*LRTRLRSACSV
Trigger: CACACTGCAGGCTGAGCGCAGCCGGGTCCTGAGCCAGCTGGATGCCTCGGTCAGAGACAGGCAGGACATGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp CGCTCGCACGTGGCCTTAAGGCTCTCCAAGTCCCTCTaGTACTTCTCACGCAGTGTGGCCGCGTCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RSHVALRLSKSL*YFSRSVAASPS
Trigger: GGAGGGCGACGCGGCCACACTGCGTGAGAAGTACCAGAGGGACTTGGAGAGCCTTAAGGCCACGTGCGAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp GGCACCGGGCTGGGAGCCTCTCAACCCACAGTGGGTTaGGGGTACATAGAGTCCACTTCTGGGAGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: GTGLGASQPTVG*GYIESTSGSWG
Trigger: CCCCCAGCTCCCAGAAGTGGACTCTATGTACCCCCAACCCACTGTGGGTTGAGAGGCTCCCAGCCCGGTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS CCA 72 bp GCTGGAGGGAACCAAGGCCATTCCACATATAGGGAGTaGCCTGGCGGGCACCGGGCTGGGAGCCTCTCAACC +
Preference number: 6 (lower is better)
Translates to: AGGNQGHSTYRE*PGGHRAGSLST
Trigger: GGTTGAGAGGCTCCCAGCCCGGTGCCCGCCAGGCCACTCCCTATATGTGGAATGGCCTTGGTTCCCTCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS CAA 72 bp GGGCACCGGGCTGGGAGCCTCTCAACCCACAGTGGGTaGGGGGTACATAGAGTCCACTTCTGGGAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: GHRAGSLSTHSG*GVHRVHFWELG
Trigger: CCCCAGCTCCCAGAAGTGGACTCTATGTACCCCCAACCCACTGTGGGTTGAGAGGCTCCCAGCCCGGTGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS GCA 72 bp TCTCGTGCCTCCAGCTGCTCCTCCAGCTGGTGCACCTaGTCACTGCCCTCGAAAGTGGCGCTCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SRASSCSSSWCT*SLPSKVALSFS
Trigger: GGAGAAGCTGAGCGCCACTTTCGAGGGCAGTGAGCAGGTGCACCAGCTGGAGGAGCAGCTGGAGGCACGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 72 bp CCGAGGGTGACCGGTCCTGGCTGGTGTCGGAAGATGTaGTGCTGGTCCAGGTCTTCTCAGACCCTTCGGGGT +
Preference number: 6 (lower is better)
Translates to: PRVTGPGWCRKM*CWSRSSQTLRG
Trigger: ACCCCGAAGGGTCTGAGAAGACCTGGACCAGCAGCACATCTTCCGACACCAGCCAGGACCGGTCACCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp GGGTGCCCCGCAGGGTCTCCTGGATGCTCTGTAGCCTaGGGTGGAACGACTCCCTCACTGACTGTGTGGCAA +
Preference number: 6 (lower is better)
Translates to: GCPAGSPGCSVA*GGTTPSLTVWQ
Trigger: TTGCCACACAGTCAGTGAGGGAGTCGTTCCACCGCAGGCTACAGAGCATCCAGGAGACCCTGCGGGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp CCAGCTGCTTCTCAGGGAGTGCGAGGGAAAACTGGCTaGCTAAGGCGTCTTCACCCCCGGAGAGAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: PAASQGVRGKTG*LRRLHPRREEG
Trigger: GCCCTCCTCTCTCCGGGGGTGAAGACGCCTTAGGCAGCCAGTTTTCCCTCGCACTCCCTGAGAAGCAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578521.1
CDS CCA 72 bp GGCTCTCCAAGTCCCTCTGGTACTTCTCACGCAGTGTaGCCGCGTCGCCCTCCAGGTCCTTGTGTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: GSPSPSGTSHAV*PRRPPGPCVPA
Trigger: AGCTGGGACACAAGGACCTGGAGGGCGACGCGGCCACACTGCGTGAGAAGTACCAGAGGGACTTGGAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp TCCAGCCGCCTTCTCTCCACCTGGAAGGCTTCTCGGTaGCTGATCCTGATGGCCTTAGGGACGTCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SSRLLSTWKASR*LILMALGTSAR
Trigger: CCTGGCCGACGTCCCTAAGGCCATCAGGATCAGCCACCGAGAAGCCTTCCAGGTGGAGAGAAGGCGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466186.2
ENST00000584936.2
ENST00000651222.2
CDS CAA 72 bp TTCAGGTCGCCCTTGAGCTTGGCCAGCGCCTGCTCCTaGATGGCTAGCTCAGCGGCCGCATTGCTGAGCCGT +
Preference number: 6 (lower is better)
Translates to: FRSPLSLASACS*MASSAAALLSR
Trigger: ACGGCTCAGCAATGCGGCCGCTGAGCTAGCCATCAAGGAGCAGGCGCTGGCCAAGCTCAAGGGCGACCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 72 bp GCCCCAGGGCTCTGGTCAGACACATCGAAGGGCTCCTaGGAGCTGTCTGAGTCTCGGCCCAGGACTTCTCCT +
Preference number: 6 (lower is better)
Translates to: APGLWSDTSKGS*ELSESRPRTSP
Trigger: AGGAGAAGTCCTGGGCCGAGACTCAGACAGCTCTCAGGAGCCCTTCGATGTGTCTGACCAGAGCCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp TTGGTTGACTCTATGGAGCCTCTGCCAGGCACCCGATaGGGAGGCGGCCACTTCAGTCTGCAGCACGTAGCC +
Preference number: 6 (lower is better)
Translates to: LVDSMEPLPGTR*GGGHFSLQHVA
Trigger: GGCTACGTGCTGCAGACTGAAGTGGCCGCCTCCCCATCGGGTGCCTGGCAGAGGCTCCATAGAGTCAACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp CCACTGACTTTGGGGGCACCATGCTGTCTTCCCTACTaGGGCTGCCATCACCGTACTCTTCCCCCGGAGGAG +
Preference number: 6 (lower is better)
Translates to: PLTLGAPCCLPY*GCHHRTLPPEE
Trigger: CTCCTCCGGGGGAAGAGTACGGTGATGGCAGCCCCAGTAGGGAAGACAGCATGGTGCCCCCAAAGTCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp CCCCGCAGGGTCTCCTGGATGCTCTGTAGCCTGCGGTaGAACGACTCCCTCACTGACTGTGTGGCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: PRRVSWMLCSLR*NDSLTDCVAKL
Trigger: CAGCTTTGCCACACAGTCAGTGAGGGAGTCGTTCCACCGCAGGCTACAGAGCATCCAGGAGACCCTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp GAGGCCAGCTGCTTCTCAGGGAGTGCGAGGGAAAACTaGCTGCCTAAGGCGTCTTCACCCCCGGAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: EASCFSGSAREN*LPKASSPPERG
Trigger: TCCTCTCTCCGGGGGTGAAGACGCCTTAGGCAGCCAGTTTTCCCTCGCACTCCCTGAGAAGCAGCTGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578521.1
CDS CAA 72 bp TCCTGCGTCTTCTCCAGCAGCAGGGCCTCAGCACTCTaGAGCTTCTGCTCGCTAGCCCTCAGCTGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SCVFSSSRASAL*SFCSLALSWLL
Trigger: GAGCAGCCAGCTGAGGGCTAGCGAGCAGAAGCTCAAGAGTGCTGAGGCCCTGCTGCTGGAGAAGACGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CAA 90 bp CAGCTCCTGGCGCTGGCACTGGGCTTCAAGCTCACTTTGAAGGTCTaGGTTGACTCTATGGAGCCTCTGCCAGGCACCCGATGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: QLLALALGFKLTLKV*VDSMEPLPGTRWGG
Trigger: GCCTCCCCATCGGGTGCCTGGCAGAGGCTCCATAGAGTCAACCAAGACCTTCAAAGTGAGCTTGAAGCCCAGTGCCAGCGCCAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CAA 90 bp CTGTGCCCTGCTGATGGCCCTCCCTGTCAAGCACTTCCACTGACTTaGGGGGCACCATGCTGTCTTCCCTACTGGGGCTGCCATCACCGT +
Preference number: 6 (lower is better)
Translates to: LCPADGPPCQALPLT*GAPCCLPYWGCHHR
Trigger: ACGGTGATGGCAGCCCCAGTAGGGAAGACAGCATGGTGCCCCCAAAGTCAGTGGAAGTGCTTGACAGGGAGGGCCATCAGCAGGGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 72 bp GCTCCTCCTCGTGGATCGTCTGCAGCTCCCGGACCTTaGGCTGGAACCTGTCCTCCAGGGTCTGTATCTGCT +
Preference number: 6 (lower is better)
Translates to: APPRGSSAAPGP*AGTCPPGSVSA
Trigger: AGCAGATACAGACCCTGGAGGACAGGTTCCAGCTCAAGGTCCGGGAGCTGCAGACGATCCACGAGGAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp CGCTCAGCCTGCAGTGTGCTCTCGGTCCTGGTCAGCTaGTCCACCACACACCGAATCTCCTCCTCATACCTG +
Preference number: 6 (lower is better)
Translates to: RSACSVLSVLVS*STTHRISSSYL
Trigger: CAGGTATGAGGAGGAGATTCGGTGTGTGGTGGAGCAGCTGACCAGGACCGAGAGCACACTGCAGGCTGAGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp GCCCGAGTTCTACGCTCCAGCCGCCTTCTCTCCACCTaGAAGGCTTCTCGGTGGCTGATCCTGATGGCCTTA +
Preference number: 6 (lower is better)
Translates to: ARVLRSSRLLST*KASRWLILMAL
Trigger: TAAGGCCATCAGGATCAGCCACCGAGAAGCCTTCCAGGTGGAGAGAAGGCGGCTGGAGCGTAGAACTCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000466186.2
ENST00000584936.2
ENST00000651222.2
CDS CAA 72 bp GCTGATGGCCCTCCCTGTCAAGCACTTCCACTGACTTaGGGGGCACCATGCTGTCTTCCCTACTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: ADGPPCQALPLT*GAPCCLPYWGC
Trigger: GCAGCCCCAGTAGGGAAGACAGCATGGTGCCCCCAAAGTCAGTGGAAGTGCTTGACAGGGAGGGCCATCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CAA 72 bp CCTGATGGCCTTAGGGACGTCGGCCAGGGTGGCATATaGCCTGCTGGCTTTAAAGGCAAAGGCGCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: PDGLRDVGQGGI*PAGFKGKGAPQ
Trigger: CTGGGGAGCGCCTTTGCCTTTAAAGCCAGCAGGCAATATGCCACCCTGGCCGACGTCCCTAAGGCCATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466186.2
ENST00000584936.2
ENST00000651222.2
CDS TCA 72 bp CCAGGTGCCCCTTGGTCGAGTTTGGCTGTGCCCTGCTaGTGGCCCTCCCTGTCAAGCACTTCCACTGACTTT +
Preference number: 6 (lower is better)
Translates to: PGAPWSSLAVPC*WPSLSSTSTDF
Trigger: AAAGTCAGTGGAAGTGCTTGACAGGGAGGGCCATCAGCAGGGCACAGCCAAACTCGACCAAGGGGCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 72 bp CTGGCCTTCTCCTTCAGCTGCTGGGCAAGCTCCTCCTaGATAGCAACAAAGGCCCCAGGGCTCTGGTCAGAC +
Preference number: 6 (lower is better)
Translates to: LAFSFSCWASSS*IATKAPGLWSD
Trigger: GTCTGACCAGAGCCCTGGGGCCTTTGTTGCTATTCAGGAGGAGCTTGCCCAGCAGCTGAAGGAGAAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp TTGCAGGCAGTACACTGGGTGCAGGCTCTGAGGACATaGTTTCTTCCGAGGGTGACCGGTCCTGGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: LQAVHWVQALRT*FLPRVTGPGWC
Trigger: ACACCAGCCAGGACCGGTCACCCTCGGAAGAAAGCATGTCCTCAGAGCCTGCACCCAGTGTACTGCCTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp GAGGCACCGACTGCCTCTCCTCCCAGTGTCCCCAAGTaGTTCCTCAGAGACTCAACCTGGCTCCAGAACTCA +
Preference number: 6 (lower is better)
Translates to: EAPTASPPSVPK*FLRDSTWLQNS
Trigger: TGAGTTCTGGAGCCAGGTTGAGTCTCTGAGGAAGCACTTGGGGACACTGGGAGGAGAGGCAGTCGGTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp GTTCCTAGATTGTTCTTCCCCAGGGAGTTGCAAGGCTaGCAGCCTGGCTACGATAGCCGGGCAGGCACGTGT +
Preference number: 6 (lower is better)
Translates to: VPRLFFPRELQG*QPGYDSRAGTC
Trigger: ACACGTGCCTGCCCGGCTATCGTAGCCAGGCTGGCAGCCTTGCAACTCCCTGGGGAAGAACAATCTAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS GCA 72 bp CTGATGGCCTTAGGGACGTCGGCCAGGGTGGCATATTaGCTGCTGGCTTTAAAGGCAAAGGCGCTCCCCAGT +
Preference number: 6 (lower is better)
Translates to: LMALGTSARVAY*LLALKAKALPS
Trigger: ACTGGGGAGCGCCTTTGCCTTTAAAGCCAGCAGGCAATATGCCACCCTGGCCGACGTCCCTAAGGCCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466186.2
ENST00000584936.2
ENST00000651222.2
CDS CCA 72 bp TCCGGATCTCAGCCTCGTGGTGCCGGATCGTGTCCTTaGCCTCCCCATAGCTACGCTTCAGGGTCTGAATCT +
Preference number: 6 (lower is better)
Translates to: SGSQPRGAGSCP*PPHSYASGSES
Trigger: AGATTCAGACCCTGAAGCGTAGCTATGGGGAGGCCAAGGACACGATCCGGCACCACGAGGCTGAGATCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp CTTGTGTGTGGGAGGCCTAGAGGTGCCCTAGTGGCTTaGACTGGTTGGCCTGGGAGCAAAGTGCCATCCCTT +
Preference number: 6 (lower is better)
Translates to: LVCGRPRGALVA*TGWPGSKVPSL
Trigger: AAGGGATGGCACTTTGCTCCCAGGCCAACCAGTCCAAGCCACTAGGGCACCTCTAGGCCTCCCACACACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp GTGACCGGTCCTGGCTGGTGTCGGAAGATGTGCTGCTaGTCCAGGTCTTCTCAGACCCTTCGGGGTGAATGT +
Preference number: 6 (lower is better)
Translates to: VTGPGWCRKMCC*SRSSQTLRGEC
Trigger: ACATTCACCCCGAAGGGTCTGAGAAGACCTGGACCAGCAGCACATCTTCCGACACCAGCCAGGACCGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp TCTGAGGACATGCTTTCTTCCGAGGGTGACCGGTCCTaGCTGGTGTCGGAAGATGTGCTGCTGGTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: SEDMLSSEGDRS*LVSEDVLLVQV
Trigger: GACCTGGACCAGCAGCACATCTTCCGACACCAGCCAGGACCGGTCACCCTCGGAAGAAAGCATGTCCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp GTCCCAGGACAGCTGAACACCATCTTCATGGCCCGCTaGAAGCCTGAGGGCTTCCAAGACCTGCTGCATCAC +
Preference number: 6 (lower is better)
Translates to: VPGQLNTIFMAR*KPEGFQDLLHH
Trigger: GTGATGCAGCAGGTCTTGGAAGCCCTCAGGCTTCCAGCGGGCCATGAAGATGGTGTTCAGCTGTCCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp GGGACAGGCTGCTATGAAATGGAAACCAGCCAACCCTaGACCTTCCTGCGTTGCTGCCAGGTGGGACCCACA +
Preference number: 6 (lower is better)
Translates to: GTGCYEMETSQP*TFLRCCQVGPT
Trigger: TGTGGGTCCCACCTGGCAGCAACGCAGGAAGGTCCAGGGTTGGCTGGTTTCCATTTCATAGCAGCCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS CAA 72 bp TCTGAGCAGGAGGGCTCCCGGGTTTGCCAGGACTCCTaGCAGAGCTGGAGCTCCTTCTCATATTCTAGCCGG +
Preference number: 6 (lower is better)
Translates to: SEQEGSRVCQDS*QSWSSFSYSSR
Trigger: CCGGCTAGAATATGAGAAGGAGCTCCAGCTCTGCAAGGAGTCCTGGCAAACCCGGGAGCCCTCCTGCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 90 bp TGTGCCTGCTCTGAGCAGGAGGGCTCCCGGGTTTGCCAGGACTCCTaGCAGAGCTGGAGCTCCTTCTCATATTCTAGCCGGATTCTGCAG +
Preference number: 6 (lower is better)
Translates to: CACSEQEGSRVCQDS*QSWSSFSYSSRILQ
Trigger: CTGCAGAATCCGGCTAGAATATGAGAAGGAGCTCCAGCTCTGCAAGGAGTCCTGGCAAACCCGGGAGCCCTCCTGCTCAGAGCAGGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 90 bp TCCCTTTCAACAATGGCGATCACATCCAGGTACTCGCTCTTCTGCTaGCGGAGAAGCTCCTCATACTCCTCCCTCAGGGCCCGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SLSTMAITSRYSLFC*RRSSSYSSLRARAA
Trigger: GGCAGCCCGGGCCCTGAGGGAGGAGTATGAGGAGCTTCTCCGCAAGCAGAAGAGCGAGTACCTGGATGTGATCGCCATTGTTGAAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 90 bp TGCTCCACACCCCAGAATGTTCCTAGATTGTTCTTCCCCAGGGAGTaGCAAGGCTGCCAGCCTGGCTACGATAGCCGGGCAGGCACGTGT +
Preference number: 6 (lower is better)
Translates to: CSTPQNVPRLFFPRE*QGCQPGYDSRAGTC
Trigger: ACACGTGCCTGCCCGGCTATCGTAGCCAGGCTGGCAGCCTTGCAACTCCCTGGGGAAGAACAATCTAGGAACATTCTGGGGTGTGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS CAA 90 bp GTGGCTGATCCTGATGGCCTTAGGGACGTCGGCCAGGGTGGCATATaGCCTGCTGGCTTTAAAGGCAAAGGCGCTCCCCAGTCTCTCTGT +
Preference number: 6 (lower is better)
Translates to: VADPDGLRDVGQGGI*PAGFKGKGAPQSLC
Trigger: ACAGAGAGACTGGGGAGCGCCTTTGCCTTTAAAGCCAGCAGGCAATATGCCACCCTGGCCGACGTCCCTAAGGCCATCAGGATCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466186.2
ENST00000651222.2
CDS CAA 90 bp CGTGTGCCTGTCTCAGTGCTTATGCTCCCTGCGATGGCTGGCCCCTaGGTCTTCCCAGCAGCCGACGAGATTCTAGAAGACAAGGATGCT +
Preference number: 6 (lower is better)
Translates to: RVPVSVLMLPAMAGP*VFPAADEILEDKDA
Trigger: AGCATCCTTGTCTTCTAGAATCTCGTCGGCTGCTGGGAAGACCAAGGGGCCAGCCATCGCAGGGAGCATAAGCACTGAGACAGGCACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS CAA 90 bp GTGGCTGATCCTGATGGCCTTAGGGACGTCGGCCAGGGTGGCATATaGCCTGCTGGCTTTAAAGGCAAAGGCGCTCCCCAGTCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: VADPDGLRDVGQGGI*PAGFKGKGAPQSSL
Trigger: CAAAGAAGACTGGGGAGCGCCTTTGCCTTTAAAGCCAGCAGGCAATATGCCACCCTGGCCGACGTCCCTAAGGCCATCAGGATCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584936.2
CDS TCA 72 bp GGCACTGGGCTTCAAGCTCACTTTGAAGGTCTTGGTTaGCTCTATGGAGCCTCTGCCAGGCACCCGATGGGG +
Preference number: 6 (lower is better)
Translates to: GTGLQAHFEGLG*LYGASARHPMG
Trigger: CCCCATCGGGTGCCTGGCAGAGGCTCCATAGAGTCAACCAAGACCTTCAAAGTGAGCTTGAAGCCCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 72 bp CCCTCTGAGGCACACAGCAAGGCAGCAATGGGTGAATaGATCCAAGCTCCCTTGTGGTTTCCCCAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: PSEAHSKAAMGE*IQAPLWFPQAP
Trigger: TGGGGCCTGGGGAAACCACAAGGGAGCTTGGATTCATTCACCCATTGCTGCCTTGCTGTGTGCCTCAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS TCA 72 bp GCAGAGGCTGGCTGTGTCTGGTCTGGAGGGACACGGTaGAAGGCCCGTAAAACAGGGATGAGGGACTTGTCT +
Preference number: 6 (lower is better)
Translates to: AEAGCVWSGGTR*KARKTGMRDLS
Trigger: AGACAAGTCCCTCATCCCTGTTTTACGGGCCTTTCACCGTGTCCCTCCAGACCAGACACAGCCAGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS GCA 72 bp CCCTGTCAAGCACTTCCACTGACTTTGGGGGCACCATaGTGTCTTCCCTACTGGGGCTGCCATCACCGTACT +
Preference number: 6 (lower is better)
Translates to: PCQALPLTLGAP*CLPYWGCHHRT
Trigger: AGTACGGTGATGGCAGCCCCAGTAGGGAAGACAGCATGGTGCCCCCAAAGTCAGTGGAAGTGCTTGACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS GCA 72 bp CCCAGAATGTTCCTAGATTGTTCTTCCCCAGGGAGTTaGAAGGCTGCCAGCCTGGCTACGATAGCCGGGCAG +
Preference number: 6 (lower is better)
Translates to: PRMFLDCSSPGS*KAASLATIAGQ
Trigger: CTGCCCGGCTATCGTAGCCAGGCTGGCAGCCTTGCAACTCCCTGGGGAAGAACAATCTAGGAACATTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS CCA 72 bp AGGACATGCTTTCTTCCGAGGGTGACCGGTCCTGGCTaGTGTCGGAAGATGTGCTGCTGGTCCAGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: RTCFLPRVTGPG*CRKMCCWSRSS
Trigger: AGAAGACCTGGACCAGCAGCACATCTTCCGACACCAGCCAGGACCGGTCACCCTCGGAAGAAAGCATGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp GGTACGTGTCAGAGTCGCCAGTTGCAGGCAGTACACTaGGTGCAGGCTCTGAGGACATGCTTTCTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: GTCQSRQLQAVH*VQALRTCFLPR
Trigger: CCTCGGAAGAAAGCATGTCCTCAGAGCCTGCACCCAGTGTACTGCCTGCAACTGGCGACTCTGACACGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp GAGATGGTAAGGCAGCCGCTATCTCCTCTAAGAGGCTaGCCTTCTCCTTCAGCTGCTGGGCAAGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: EMVRQPLSPLRG*PSPSAAGQAPP
Trigger: AGGAGGAGCTTGCCCAGCAGCTGAAGGAGAAGGCCAGCCTCTTAGAGGAGATAGCGGCTGCCTTACCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 72 bp GCGCTGGCACTGGGCTTCAAGCTCACTTTGAAGGTCTaGGTTGACTCTATGGAGCCTCTGCCAGGCACCCGA +
Preference number: 6 (lower is better)
Translates to: ALALGFKLTLKV*VDSMEPLPGTR
Trigger: TCGGGTGCCTGGCAGAGGCTCCATAGAGTCAACCAAGACCTTCAAAGTGAGCTTGAAGCCCAGTGCCAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CAA 72 bp GTCTCAGTGCTTATGCTCCCTGCGATGGCTGGCCCCTaGGTCTTCCCAGCAGCCGACGAGATTCTAGAAGAC +
Preference number: 6 (lower is better)
Translates to: VSVLMLPAMAGP*VFPAADEILED
Trigger: GTCTTCTAGAATCTCGTCGGCTGCTGGGAAGACCAAGGGGCCAGCCATCGCAGGGAGCATAAGCACTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS CAA 72 bp CCCCAGAATGTTCCTAGATTGTTCTTCCCCAGGGAGTaGCAAGGCTGCCAGCCTGGCTACGATAGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: PQNVPRLFFPRE*QGCQPGYDSRA
Trigger: TGCCCGGCTATCGTAGCCAGGCTGGCAGCCTTGCAACTCCCTGGGGAAGAACAATCTAGGAACATTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS TCA 72 bp AGCTCCTGGCGCTGGCACTGGGCTTCAAGCTCACTTTaGAGGTCTTGGTTGACTCTATGGAGCCTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: SSWRWHWASSSL*RSWLTLWSLCQ
Trigger: CTGGCAGAGGCTCCATAGAGTCAACCAAGACCTTCAAAGTGAGCTTGAAGCCCAGTGCCAGCGCCAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 72 bp CTGGAGGGACACGGTGAAAGGCCCGTAAAACAGGGATaGGGGACTTGTCTGCTGGAGGGAACCAAGGCCATT +
Preference number: 6 (lower is better)
Translates to: LEGHGERPVKQG*GTCLLEGTKAI
Trigger: AATGGCCTTGGTTCCCTCCAGCAGACAAGTCCCTCATCCCTGTTTTACGGGCCTTTCACCGTGTCCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS CCA 72 bp CCCAGTGTCCCCAAGTGCTTCCTCAGAGACTCAACCTaGCTCCAGAACTCACCATCCACTAGGACCTTCCTG +
Preference number: 6 (lower is better)
Translates to: PSVPKCFLRDST*LQNSPSTRTFL
Trigger: CAGGAAGGTCCTAGTGGATGGTGAGTTCTGGAGCCAGGTTGAGTCTCTGAGGAAGCACTTGGGGACACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 72 bp GAACCGGATTCTTTGCCTTTTAACACCAGGTGCCCCTaGGTCGAGTTTGGCTGTGCCCTGCTGATGGCCCTC +
Preference number: 6 (lower is better)
Translates to: EPDSLPFNTRCP*VEFGCALLMAL
Trigger: GAGGGCCATCAGCAGGGCACAGCCAAACTCGACCAAGGGGCACCTGGTGTTAAAAGGCAAAGAATCCGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CAA 72 bp ACAATGGCGATCACATCCAGGTACTCGCTCTTCTGCTaGCGGAGAAGCTCCTCATACTCCTCCCTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: TMAITSRYSLFC*RRSSSYSSLRA
Trigger: GGCCCTGAGGGAGGAGTATGAGGAGCTTCTCCGCAAGCAGAAGAGCGAGTACCTGGATGTGATCGCCATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 72 bp CTCCCTTCCTGCTCCACACCCCAGAATGTTCCTAGATaGTTCTTCCCCAGGGAGTTGCAAGGCTGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: LPSCSTPQNVPR*FFPRELQGCQP
Trigger: AGGCTGGCAGCCTTGCAACTCCCTGGGGAAGAACAATCTAGGAACATTCTGGGGTGTGGAGCAGGAAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS CAA 90 bp GATTGTGGAGAACCGGATTCTTTGCCTTTTAACACCAGGTGCCCCTaGGTCGAGTTTGGCTGTGCCCTGCTGATGGCCCTCCCTGTCAAG +
Preference number: 6 (lower is better)
Translates to: DCGEPDSLPFNTRCP*VEFGCALLMALPVK
Trigger: CTTGACAGGGAGGGCCATCAGCAGGGCACAGCCAAACTCGACCAAGGGGCACCTGGTGTTAAAAGGCAAAGAATCCGGTTCTCCACAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CAA 90 bp GAGGGCTTCCAAGACCTGCTGCATCACTCTTTCAAAGTCTGGGGTTaGGTAGGCTCCCAGGATTTCCCTCAGCAGGCATTTGTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: EGFQDLLHHSFKVWG*VGSQDFPQQAFVLP
Trigger: CGGCAGCACAAATGCCTGCTGAGGGAAATCCTGGGAGCCTACCAAACCCCAGACTTTGAAAGAGTGATGCAGCAGGTCTTGGAAGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 90 bp CATGTGACACTCCCTTCCTGCTCCACACCCCAGAATGTTCCTAGATaGTTCTTCCCCAGGGAGTTGCAAGGCTGCCAGCCTGGCTACGAT +
Preference number: 6 (lower is better)
Translates to: HVTLPSCSTPQNVPR*FFPRELQGCQPGYD
Trigger: ATCGTAGCCAGGCTGGCAGCCTTGCAACTCCCTGGGGAAGAACAATCTAGGAACATTCTGGGGTGTGGAGCAGGAAGGGAGTGTCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395807.2
CDS TCA 72 bp GTGCTGCTGGTCCAGGTCTTCTCAGACCCTTCGGGGTaGATGTATCTTTGGCACTGGATTGTGGAGAACCGG +
Preference number: 6 (lower is better)
Translates to: VLLVQVFSDPSG*MYLWHWIVENR
Trigger: CCGGTTCTCCACAATCCAGTGCCAAAGATACATTCACCCCGAAGGGTCTGAGAAGACCTGGACCAGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS TCA 72 bp ACTGCTGCTGATGGTCTAGCTGGGCGGCCTTGGCCTTaGGCTCTGCATTCTCCCTTTCAACAATGGCGATCA +
Preference number: 6 (lower is better)
Translates to: TAADGLAGRPWP*ALHSPFQQWRS
Trigger: TGATCGCCATTGTTGAAAGGGAGAATGCAGAGCTCAAGGCCAAGGCCGCCCAGCTAGACCATCAGCAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS TCA 72 bp GGAGAAGTTGGTATGGTAGGTGGGGACAGGCTGCTATaGAATGGAAACCAGCCAACCCTGGACCTTCCTGCG +
Preference number: 6 (lower is better)
Translates to: GEVGMVGGDRLL*NGNQPTLDLPA
Trigger: CGCAGGAAGGTCCAGGGTTGGCTGGTTTCCATTTCATAGCAGCCTGTCCCCACCTACCATACCAACTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS GCA 72 bp TTCCTTCAGACTCTCCTGCATGGGCCGGGAAGCGGGTaGATTTCAGGTATCCCACGAGACCTGCTCAATTAC +
Preference number: 6 (lower is better)
Translates to: FLQTLLHGPGSG*ISGIPRDLLNY
Trigger: GTAATTGAGCAGGTCTCGTGGGATACCTGAAATGCACCCGCTTCCCGGCCCATGCAGGAGAGTCTGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341712.8
ENST00000414263.5
CDS GCA 72 bp GTGTCTTTAACACCTGTGGAGTTAGTGCGTGCACATTaGTGGCTCAGCGTAACCCATCACGGGACCGGAGGA +
Preference number: 6 (lower is better)
Translates to: VSLTPVELVRAH*WLSVTHHGTGG
Trigger: TCCTCCGGTCCCGTGATGGGTTACGCTGAGCCAGCAATGTGCACGCACTAACTCCACAGGTGTTAAAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS CCA 72 bp TCTTTAACACCTGTGGAGTTAGTGCGTGCACATTGCTaGCTCAGCGTAACCCATCACGGGACCGGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: SLTPVELVRAHC*LSVTHHGTGGE
Trigger: CTCTCCTCCGGTCCCGTGATGGGTTACGCTGAGCCAGCAATGTGCACGCACTAACTCCACAGGTGTTAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS CCA 72 bp CGTCTATCCTACTACTGCATGACCCAGGCCCCTCACTaGGTGCAATCACACCACCATCTGTCCCTGTATCCA +
Preference number: 6 (lower is better)
Translates to: RLSYYCMTQAPH*VQSHHHLSLYP
Trigger: TGGATACAGGGACAGATGGTGGTGTGATTGCACCCAGTGAGGGGCCTGGGTCATGCAGTAGTAGGATAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581955.1
CDS CAA 72 bp AGTGTCTTTAACACCTGTGGAGTTAGTGCGTGCACATaGCTGGCTCAGCGTAACCCATCACGGGACCGGAGG +
Preference number: 6 (lower is better)
Translates to: SVFNTCGVSACT*LAQRNPSRDRR
Trigger: CCTCCGGTCCCGTGATGGGTTACGCTGAGCCAGCAATGTGCACGCACTAACTCCACAGGTGTTAAAGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS CAA 90 bp TGCGTCCTGCTCATCCTCCTGGCTGGCCCTAGGCAGAGATCTCAGTaGTTCTCGGCAATTTTCCAGGCACATCAGGGCCTGACTATTCTT +
Preference number: 6 (lower is better)
Translates to: CVLLILLAGPRQRSQ*FSAIFQAHQGLTIL
Trigger: AAGAATAGTCAGGCCCTGATGTGCCTGGAAAATTGCCGAGAACAACTGAGATCTCTGCCTAGGGCCAGCCAGGAGGATGAGCAGGACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 90 bp TCAGCAGAAAGTGTCTTTAACACCTGTGGAGTTAGTGCGTGCACATaGCTGGCTCAGCGTAACCCATCACGGGACCGGAGGAGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: SAESVFNTCGVSACT*LAQRNPSRDRRRGE
Trigger: CTCTCCTCTCCTCCGGTCCCGTGATGGGTTACGCTGAGCCAGCAATGTGCACGCACTAACTCCACAGGTGTTAAAGACACTTTCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS TCA 72 bp ACAGCTGAACACCATCTTCATGGCCCGCTGGAAGCCTaGGGGCTTCCAAGACCTGCTGCATCACTCTTTCAA +
Preference number: 6 (lower is better)
Translates to: TAEHHLHGPLEA*GLPRPAASLFQ
Trigger: TTGAAAGAGTGATGCAGCAGGTCTTGGAAGCCCTCAGGCTTCCAGCGGGCCATGAAGATGGTGTTCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp TCAACAATGGCGATCACATCCAGGTACTCGCTCTTCTaGTTGCGGAGAAGCTCCTCATACTCCTCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: STMAITSRYSLF*LRRSSSYSSLR
Trigger: CCTGAGGGAGGAGTATGAGGAGCTTCTCCGCAAGCAGAAGAGCGAGTACCTGGATGTGATCGCCATTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp AGTTGGTATGGTAGGTGGGGACAGGCTGCTATGAAATaGAAACCAGCCAACCCTGGACCTTCCTGCGTTGCT +
Preference number: 6 (lower is better)
Translates to: SWYGRWGQAAMK*KPANPGPSCVA
Trigger: AGCAACGCAGGAAGGTCCAGGGTTGGCTGGTTTCCATTTCATAGCAGCCTGTCCCCACCTACCATACCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS CAA 72 bp CTGACAACCTCCAGCTGGTCACTTAATGCTCAGGTGTaGACTGAGGGAGTAAGATCAGGCTACAGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: LTTSSWSLNAQV*TEGVRSGYRLP
Trigger: GGGGAGCCTGTAGCCTGATCTTACTCCCTCAGTCAACACCTGAGCATTAAGTGACCAGCTGGAGGTTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS GCA 72 bp CGGGAAGCGGGTGCATTTCAGGTATCCCACGAGACCTaGTCAATTACGGACTTGGACCTGATGTTTCTGAGT +
Preference number: 6 (lower is better)
Translates to: REAGAFQVSHET*SITDLDLMFLS
Trigger: ACTCAGAAACATCAGGTCCAAGTCCGTAATTGAGCAGGTCTCGTGGGATACCTGAAATGCACCCGCTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341712.8
ENST00000414263.5
CDS GCA 72 bp TCAGGCCGTGGTGTCTCCCACGTCTGTGTTCTTATTTaGAGCTCAGGGTTTGCATTCCCAGGTAGAACAGGT +
Preference number: 6 (lower is better)
Translates to: SGRGVSHVCVLI*SSGFAFPGRTG
Trigger: ACCTGTTCTACCTGGGAATGCAAACCCTGAGCTGCAAATAAGAACACAGACGTGGGAGACACCACGGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS GCA 72 bp GCAGAAAGTGTCTTTAACACCTGTGGAGTTAGTGCGTaGACATTGCTGGCTCAGCGTAACCCATCACGGGAC +
Preference number: 6 (lower is better)
Translates to: AESVFNTCGVSA*TLLAQRNPSRD
Trigger: GTCCCGTGATGGGTTACGCTGAGCCAGCAATGTGCACGCACTAACTCCACAGGTGTTAAAGACACTTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS CAA 90 bp ACTAGCCAGCTGACAACCTCCAGCTGGTCACTTAATGCTCAGGTGTaGACTGAGGGAGTAAGATCAGGCTACAGGCTCCCCTTCCTTCTA +
Preference number: 6 (lower is better)
Translates to: TSQLTTSSWSLNAQV*TEGVRSGYRLPFLL
Trigger: TAGAAGGAAGGGGAGCCTGTAGCCTGATCTTACTCCCTCAGTCAACACCTGAGCATTAAGTGACCAGCTGGAGGTTGTCAGCTGGCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578548.1
CDS CAA 90 bp GCTGCTGGTCCAGGTCTTCTCAGACCCTTCGGGGTGAATGTATCTTaGGCACTGGATTGTGGAGAACCGGATTCTTTGCCTTTTAACACC +
Preference number: 6 (lower is better)
Translates to: AAGPGLLRPFGVNVS*ALDCGEPDSLPFNT
Trigger: GGTGTTAAAAGGCAAAGAATCCGGTTCTCCACAATCCAGTGCCAAAGATACATTCACCCCGAAGGGTCTGAGAAGACCTGGACCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp CTGTCCCTGTATCCAGCCAAAGATAGTCCACGCCAGTaGTCCTCAAACATGCTGCTGTTGAAATCCCTTCAC +
Preference number: 6 (lower is better)
Translates to: LSLYPAKDSPRQ*SSNMLLLKSLH
Trigger: GTGAAGGGATTTCAACAGCAGCATGTTTGAGGACCACTGGCGTGGACTATCTTTGGCTGGATACAGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581955.1
CDS CAA 72 bp CCAGGTCTTCTCAGACCCTTCGGGGTGAATGTATCTTaGGCACTGGATTGTGGAGAACCGGATTCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: PGLLRPFGVNVS*ALDCGEPDSLP
Trigger: AGGCAAAGAATCCGGTTCTCCACAATCCAGTGCCAAAGATACATTCACCCCGAAGGGTCTGAGAAGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 72 bp CTGATGTTGTGTTCTTCAGGGAATCTGCTATCTGGCTaGTCAGCGAGGCCTCCAGAGCAATCTGGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: LMLCSSGNLLSG*SARPPEQSGQK
Trigger: TTTCTGACCAGATTGCTCTGGAGGCCTCGCTGATCAGCCAGATAGCAGATTCCCTGAAGAACACAACATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CCA 72 bp ACATCTGATGTTGTGTTCTTCAGGGAATCTGCTATCTaGCTGATCAGCGAGGCCTCCAGAGCAATCTGGTCA +
Preference number: 6 (lower is better)
Translates to: TSDVVFFRESAI*LISEASRAIWS
Trigger: TGACCAGATTGCTCTGGAGGCCTCGCTGATCAGCCAGATAGCAGATTCCCTGAAGAACACAACATCAGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 72 bp TCTCCCACGTCTGTGTTCTTATTTGCAGCTCAGGGTTaGCATTCCCAGGTAGAACAGGTGTCGTACACTTGG +
Preference number: 6 (lower is better)
Translates to: SPTSVFLFAAQG*HSQVEQVSYTW
Trigger: CCAAGTGTACGACACCTGTTCTACCTGGGAATGCAAACCCTGAGCTGCAAATAAGAACACAGACGTGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578209.5
CDS CAA 72 bp GATAGTCCACGCCAGTGGTCCTCAAACATGCTGCTGTaGAAATCCCTTCACACTCTTAAAAACTGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: DSPRQWSSNMLL*KSLHTLKNWWP
Trigger: GGGCCACCAGTTTTTAAGAGTGTGAAGGGATTTCAACAGCAGCATGTTTGAGGACCACTGGCGTGGACTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581955.1
CDS TCA 72 bp ATAGTCCACGCCAGTGGTCCTCAAACATGCTGCTGTTaGAATCCCTTCACACTCTTAAAAACTGGTGGCCCT +
Preference number: 6 (lower is better)
Translates to: IVHASGPQTCCC*NPFTLLKTGGP
Trigger: AGGGCCACCAGTTTTTAAGAGTGTGAAGGGATTTCAACAGCAGCATGTTTGAGGACCACTGGCGTGGACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581955.1
CDS GCA 72 bp TATCTTTGGCACTGGATTGTGGAGAACCGGATTCTTTaGCTTTTAACACCAGGTGCCCCTTGGTCGAGTTTG +
Preference number: 6 (lower is better)
Translates to: YLWHWIVENRIL*LLTPGAPWSSL
Trigger: CAAACTCGACCAAGGGGCACCTGGTGTTAAAAGGCAAAGAATCCGGTTCTCCACAATCCAGTGCCAAAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS CCA 72 bp GATTCCATCGGTGGCTGTCCTGACCAAGAAATCTCATaGAGCATTCGGGAGACATCTGATGTTGTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: DSIGGCPDQEIS*SIRETSDVVFF
Trigger: GAAGAACACAACATCAGATGTCTCCCGAATGCTCCATGAGATTTCTTGGTCAGGACAGCCACCGATGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS CAA 72 bp GTATCTTTGGCACTGGATTGTGGAGAACCGGATTCTTaGCCTTTTAACACCAGGTGCCCCTTGGTCGAGTTT +
Preference number: 6 (lower is better)
Translates to: VSLALDCGEPDS*PFNTRCPLVEF
Trigger: AAACTCGACCAAGGGGCACCTGGTGTTAAAAGGCAAAGAATCCGGTTCTCCACAATCCAGTGCCAAAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 72 bp AACCTGGGCCTGAATAATGGCATCCTGAACCAACAATaGAGAATACTGACCGAGGCCTCCCAAACAAGTGTT +
Preference number: 6 (lower is better)
Translates to: NLGLNNGILNQQ*RILTEASQTSV
Trigger: AACACTTGTTTGGGAGGCCTCGGTCAGTATTCTTCATTGTTGGTTCAGGATGCCATTATTCAGGCCCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313485.10
ENST00000414263.5
ENST00000651222.2
CDS GCA 72 bp AAGGCAACCATTTTAACCAAAGCCTCATTGAGGTCCTaGTCCTTCTTCTCCAGAACCTTCTCATGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: KATILTKASLRS*SFFSRTFSCAS
Trigger: GGAAGCACATGAGAAGGTTCTGGAGAAGAAGGAGCAGGACCTCAATGAGGCTTTGGTTAAAATGGTTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313485.10
ENST00000651222.2
CDS TCA 72 bp GTCCTTCAACATGAGAACATTCGTGCATCATATATGTaGGCTCCACGTTTCATTTCAAGGGGGTGGGTGTTT +
Preference number: 6 (lower is better)
Translates to: VLQHENIRASYM*APRFISRGWVF
Trigger: AAACACCCACCCCCTTGAAATGAAACGTGGAGCTCACATATATGATGCACGAATGTTCTCATGTTGAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395806.5
CDS TCA 72 bp ACTGACTTTACTTTTAATAGTATACACACTGACAAGTaGGGACACCGTCTATCCTACTACTGCATGACCCAG +
Preference number: 6 (lower is better)
Translates to: TDFTFNSIHTDK*GHRLSYYCMTQ
Trigger: CTGGGTCATGCAGTAGTAGGATAGACGGTGTCCTCACTTGTCAGTGTGTATACTATTAAAAGTAAAGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581955.1
CDS CCA 72 bp TTAAAAACTGGTGGCCCTAGAAGAGCTTCTGTTAGGTaGATTTCATCTATTGATGGTATTTACTATGTTAGA +
Preference number: 6 (lower is better)
Translates to: LKTGGPRRASVR*ISSIDGIYYVR
Trigger: TCTAACATAGTAAATACCATCAATAGATGAAATCCACCTAACAGAAGCTCTTCTAGGGCCACCAGTTTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581955.1