RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPPED2 (Homo sapiens)

Ensembl gene IDs: ENSG00000066382

Ensembl transcript IDs: ENST00000358117.10, ENST00000448418.6, ENST00000524636.1, ENST00000525519.1, ENST00000526437.5, ENST00000528686.2, ENST00000529220.5

Found 426 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGCTGGAGGCACCTGCTGTGTCACTCAGCTCCAGGCCGGCAACTaGCGCACACAATTCAGGGGCAGGTGCACAGTGCCTGCCTTGGCT +
Preference number: 1 (lower is better)
Translates to: QAGGTCCVTQLQAGN*RTQFRGRCTVPALA
Trigger: AGCCAAGGCAGGCACTGTGCACCTGCCCCTGAATTGTGTGCGGCAGTTGCCGGCCTGGAGCTGAGTGACACAGCAGGTGCCTCCAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 90 bp GCCTCAGTGCTGCTGACCACACGGGGTTGGAGAGACACCATCCCATaGTCTGCTCCCATCAGAAAAGGAACGGAGCAATGGGATCAGGGA +
Preference number: 1 (lower is better)
Translates to: ASVLLTTRGWRDTIP*SAPIRKGTEQWDQG
Trigger: TCCCTGATCCCATTGCTCCGTTCCTTTTCTGATGGGAGCAGAGCATGGGATGGTGTCTCTCCAACCCCGTGTGGTCAGCAGCACTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 90 bp AGTGCTGCTGACCACACGGGGTTGGAGAGACACCATCCCATGCTCTaGTCCCATCAGAAAAGGAACGGAGCAATGGGATCAGGGAGCATG +
Preference number: 1 (lower is better)
Translates to: SAADHTGLERHHPML*SHQKRNGAMGSGSM
Trigger: CATGCTCCCTGATCCCATTGCTCCGTTCCTTTTCTGATGGGAGCAGAGCATGGGATGGTGTCTCTCCAACCCCGTGTGGTCAGCAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 90 bp TTTCCTGTTGTCCACCAGGTGAGCTTCCCTGTCGCCTCCTCCTCATaGCTTCTTTGTCTTCACCAAGGAGAGGCATCTTCCTTCCTTCCT +
Preference number: 1 (lower is better)
Translates to: FPVVHQVSFPVASSS*LLCLHQGEASSFLP
Trigger: AGGAAGGAAGGAAGATGCCTCTCCTTGGTGAAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAACAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 90 bp ATTGCCCTAGATAATAAGCTTTGGTGGCGACGCTCCATTGAAATATaGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTCAGCTC +
Preference number: 1 (lower is better)
Translates to: IALDNKLWWRRSIEI*NCLQAGGTCCVTQL
Trigger: GAGCTGAGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCGTCGCCACCAAAGCTTATTATCTAGGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR TCA 90 bp CCAGTCTCAGGGATTCCTTTATGGCAGCAAAAACAGACTAACACATaGCTGTTTTCCCAGCACCTAGAACAGTGTCTAGCACAGAGCTGG +
Preference number: 1 (lower is better)
Translates to: PVSGIPLWQQKQTNT*LFSQHLEQCLAQSW
Trigger: CCAGCTCTGTGCTAGACACTGTTCTAGGTGCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTGAGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR TCA 90 bp CTTTGTAGCTTCAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATaGTGGGTGGGAGGGGGCATTTGTGTTGTCTGCTGCTGTGAGGGA +
Preference number: 1 (lower is better)
Translates to: LCSFSFLLAWLSKFS*WVGGGICVVCCCEG
Trigger: TCCCTCACAGCAGCAGACAACACAAATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTGAAGCTACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 90 bp GTGATGGAAGCAGATCTGAACCTGGGAGCATCTAACTGCACAGCGTaGACGCATATAAGCACAGCTGGATTTCAAAGCCACTATTATCTC +
Preference number: 1 (lower is better)
Translates to: VMEADLNLGASNCTA*THISTAGFQSHYYL
Trigger: GAGATAATAGTGGCTTTGAAATCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAGATCTGCTTCCATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 90 bp GCTTCAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTaGGAGGGGGCATTTGTGTTGTCTGCTGCTGTGAGGGATCTTCAT +
Preference number: 1 (lower is better)
Translates to: ASVSYWLGFPNFHDG*EGAFVLSAAVRDLH
Trigger: ATGAAGATCCCTCACAGCAGCAGACAACACAAATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 90 bp TGCTCCCATCAGAAAAGGAACGGAGCAATGGGATCAGGGAGCATGTaGAGGTGGTCCCTAGAACACTCAACGTTAATGAATTTCATTTTG +
Preference number: 1 (lower is better)
Translates to: CSHQKRNGAMGSGSM*RWSLEHSTLMNFIL
Trigger: CAAAATGAAATTCATTAACGTTGAGTGTTCTAGGGACCACCTCCACATGCTCCCTGATCCCATTGCTCCGTTCCTTTTCTGATGGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 90 bp AGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCGCCAGATaGGCTTTTCCAACATATCAATCCAATCATGTCATTGACCACCCC +
Preference number: 1 (lower is better)
Translates to: RDLHASTLLLNTVAR*AFPTYQSNHVIDHP
Trigger: GGGGTGGTCAATGACATGATTGGATTGATATGTTGGAAAAGCCCATCTGGCGACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 90 bp TTTAGAGCTTCAGGAACCCTGTGGGTTTGGAAGGTCAAATATAATTaGAGGGTTGGTCGGTTGAAAGCTGACTGTACACGTCGAGGCATT +
Preference number: 1 (lower is better)
Translates to: FRASGTLWVWKVKYN*RVGRLKADCTRRGI
Trigger: AATGCCTCGACGTGTACAGTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAACCCACAGGGTTCCTGAAGCTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR TCA 90 bp AATCAGATGAACTTCAGTAACTCTTGTCGCTGCTTGTCCTGCCCTTaGATTCATTCACAACAGTCAAACCCTCCTGATTATGCTGGGTGC +
Preference number: 1 (lower is better)
Translates to: NQMNFSNSCRCLSCP*IHSQQSNPPDYAGC
Trigger: GCACCCAGCATAATCAGGAGGGTTTGACTGTTGTGAATGAATTCAAGGGCAGGACAAGCAGCGACAAGAGTTACTGAAGTTCATCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 90 bp CTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCCTGCCATaGCAGCTAACTTCTATCCCATTTCTTATTTTCTTCATAGGGTTT +
Preference number: 1 (lower is better)
Translates to: LLSPSLMSLTHSTLP*QLTSIPFLIFFIGF
Trigger: AAACCCTATGAAGAAAATAAGAAATGGGATAGAAGTTAGCTGGCATGGCAGGGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 90 bp AATATGAGCAGGCTGTGGAGCAACCACTTGCTAGACAGATTAGCATaGCTAAAGGGGAGCCAAGTGCTAATAACCAAGACAATGGGAAAA +
Preference number: 1 (lower is better)
Translates to: NMSRLWSNHLLDRLA*LKGSQVLITKTMGK
Trigger: TTTTCCCATTGTCTTGGTTATTAGCACTTGGCTCCCCTTTAGCCATGCTAATCTGTCTAGCAAGTGGTTGCTCCACAGCCTGCTCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 90 bp TTTGCTACCTTCTTATACAAAAAGCTCTGTACCTGCTATATTCTCTaGCTGAACACTTTTGTCCCAGGTCTTCAAGTGGCTGCCTCATCC +
Preference number: 1 (lower is better)
Translates to: FATFLYKKLCTCYIL*LNTFVPGLQVAASS
Trigger: GGATGAGGCAGCCACTTGAAGACCTGGGACAAAAGTGTTCAGGCAGAGAATATAGCAGGTACAGAGCTTTTTGTATAAGAAGGTAGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 90 bp CCTAGAACACTCAACGTTAATGAATTTCATTTTGGGAGAAATATGTaGGAGCTTGGTAAGCATGCCAGCTTCTTTGAGGTTCTGTGGTGC +
Preference number: 1 (lower is better)
Translates to: PRTLNVNEFHFGRNM*ELGKHASFFEVLWC
Trigger: GCACCACAGAACCTCAAAGAAGCTGGCATGCTTACCAAGCTCCCACATATTTCTCCCAAAATGAAATTCATTAACGTTGAGTGTTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 90 bp GTAAATACTGTTTGTCAGGAGGGACTGAACATTGTCAAAGTCCTCTaGTTTCAATTTGGACACAGAGGGGAAACGGTAGTAGTCCTGTTT +
Preference number: 1 (lower is better)
Translates to: VNTVCQEGLNIVKVL*FQFGHRGETVVVLF
Trigger: AAACAGGACTACTACCGTTTCCCCTCTGTGTCCAAATTGAAACCAGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAACAGTATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR GCA 90 bp TTTGGACACAGAGGGGAAACGGTAGTAGTCCTGTTTAACAAGGTCTaGCATGAATTCCTTATCAAATGTCAGTTCATGATTCCCAGCAAT +
Preference number: 1 (lower is better)
Translates to: FGHRGETVVVLFNKV*HEFLIKCQFMIPSN
Trigger: ATTGCTGGGAATCATGAACTGACATTTGATAAGGAATTCATGGCAGACCTTGTTAAACAGGACTACTACCGTTTCCCCTCTGTGTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR TCA 90 bp TTCCTTTCAGCATGCTTATCAGTACTTATTGATAAATTCCTACTCTaGACAGATAGTCTGTCAGGGGCTGAGGATAAAGGAGACTGTCAG +
Preference number: 1 (lower is better)
Translates to: FLSACLSVLIDKFLL*TDSLSGAEDKGDCQ
Trigger: CTGACAGTCTCCTTTATCCTCAGCCCCTGACAGACTATCTGTTCAGAGTAGGAATTTATCAATAAGTACTGATAAGCATGCTGAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 90 bp ATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTaGTACCTTCTTATACAAAAAGCTCTGTACCTGCTATATTCTCTG +
Preference number: 1 (lower is better)
Translates to: IFLLTSSVLWLYWPF*YLLIQKALYLLYSL
Trigger: CAGAGAATATAGCAGGTACAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 90 bp TCTTCTTATTGCAATTATAATGAAATCTTAACTCTCATCAAGGCCTaGAAGGATGTTGATGAGTTAGCACCTGCCTCATCCCCTATCTTT +
Preference number: 1 (lower is better)
Translates to: SSYCNYNEILTLIKA*KDVDELAPASSPIF
Trigger: AAAGATAGGGGATGAGGCAGGTGCTAACTCATCAACATCCTTGCAGGCCTTGATGAGAGTTAAGATTTCATTATAATTGCAATAAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR TCA 90 bp GACAGCCATTTTCTTCTCAATGCAGCTTTCTTTATAGTGAGAGTATaGAAAGAAGTCTTTTCCATGCCTACTTCTGTTGAGAAGATTGCT +
Preference number: 1 (lower is better)
Translates to: DSHFLLNAAFFIVRV*KEVFSMPTSVEKIA
Trigger: AGCAATCTTCTCAACAGAAGTAGGCATGGAAAAGACTTCTTTTCATACTCTCACTATAAAGAAAGCTGCATTGAGAAGAAAATGGCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR TCA 90 bp GCAGGTAGGGAATGCAATCAATGTCAATATGGTTTTACTTCAATGTaGACTTGTCCTGAACACATGCTTTTTCTGGTCTTGTTTATATTG +
Preference number: 1 (lower is better)
Translates to: AGRECNQCQYGFTSM*TCPEHMLFLVLFIL
Trigger: CAATATAAACAAGACCAGAAAAAGCATGTGTTCAGGACAAGTTCACATTGAAGTAAAACCATATTGACATTGATTGCATTCCCTACCTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp CGGAGCAATGGGATCAGGGAGCATGTGGAGGTGGTCCCTAGAACACTCAACGTTAACCCCTTCCTGCAGTaGCCCTTTATGCACTGGCCC +
Preference number: 2 (lower is better)
Translates to: RSNGIREHVEVVPRTLNVNPFLQ*PFMHWP
Trigger: GGGCCAGTGCATAAAGGGCCACTGCAGGAAGGGGTT...AACGTTGAGTGTTCTAGGGACCACCTCCACATGCTCCCTGATCCCATTGCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 90 bp GGGATAGGAAACGAGAGTAGCCTCAGTGCTGCTGACCACACGGGGTaGGAGAGACACCATCCCATGCTCTGCTCCCATCAGAAAAGGAAC +
Preference number: 2 (lower is better)
Translates to: GIGNESSLSAADHTG*ERHHPMLCSHQKRN
Trigger: GTTCCTTTTCTGATGGGAGCAGAGCATGGGATGGTGTCTCTCCAACCCCGTGTGGTCAGCAGCACTGAGGCTACTCTCGTTTCCTATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATCAGGTGCACAGTGCCTaGCTTGGCTCCCGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHQVHSA*LGSRRE
Trigger: TTCCCTCCGGGAGCCAAGGCAGGCACTGTGCACCTG...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCCTCCAGGCCGGCAACTaGCGCACACAATTCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVLQAGN*RTQFRG
Trigger: GCCCCTGAATTGTGTGCGGCAGTTGCCGGCCTGGAG...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp TCATTATGTTTCAGGCATATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATGTGGGAGCTGGGGTGTaGCCAGCTGGAAGCCGCCCG +
Preference number: 2 (lower is better)
Translates to: SLCFRHIPSPPYSFQHAYVGAGV*PAGSRP
Trigger: CGGGCGGCTTCCAGCTGGGCACACCCCAGCTCCCAC...ATAAGCATGCTGAAAGGAATATGGGGGACTGGGAATATGCCTGAAACATAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATAGGGCCTGGTGCGGGTaGGGGCGGCCTAATAAAGCA +
Preference number: 2 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNRAWCG*GRPNKA
Trigger: TGCTTTATTAGGCCGCCCCCACCCGCACCAGGCCCT...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCGAGGAAGGTGGGAGCTaGGGTGTGCCCAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTEEGGS*GVPSWK
Trigger: CTTCCAGCTGGGCACACCCCAGCTCCCACCTTCCTC...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATTCTGCAGACCTGGGGTaGAGGGGGTCATCAGTGACT +
Preference number: 2 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHSADLG*RGSSVT
Trigger: AGTCACTGATGACCCCCTCCACCCCAGGTCTGCAGA...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATGGACTTGGGATGCTTTaGGAAGGGCCTGGTGCGGGT +
Preference number: 2 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNGLGML*EGPGAG
Trigger: ACCCGCACCAGGCCCTTCCCAAAGCATCCCAAGTCC...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGAAAAGGAACGGAGCAATaGGATCAGGGAGCATGTGGA +
Preference number: 2 (lower is better)
Translates to: LNLGASNCTACTHISTAGKGTEQ*DQGACG
Trigger: TCCACATGCTCCCTGATCCCATTGCTCCGTTCCTTT...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGGTCGCCTCCTCCTCATaGCTTCTTTGTCTTCACCAA +
Preference number: 2 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWVASSS*LLCLHQ
Trigger: TTGGTGAAGACAAAGAAGGCATGAGGAGGAGGCGAC...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCCGTGTCCTTGGCAGATaGCTGACGATGATGCTGGCT +
Preference number: 2 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVRVLGR*LTMMLA
Trigger: AGCCAGCATCATCGTCAGGCATCTGCCAAGGACACG...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp CGGAGCAATGGGATCAGGGAGCATGTGGAGGTGGTCCCTAGAACACTCAACGTTTTTGGGAGAAATATGTaGGAGCTTGGTAAGCATGCC +
Preference number: 2 (lower is better)
Translates to: RSNGIREHVEVVPRTLNVFGRNM*ELGKHA
Trigger: GGCATGCTTACCAAGCTCCCACATATTTCTCCCAAA...AACGTTGAGTGTTCTAGGGACCACCTCCACATGCTCCCTGATCCCATTGCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCGGATCAGGGAGCATGTaGAGGTGGTCCCTAGAACAC +
Preference number: 2 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVGSGSM*RWSLEH
Trigger: GTGTTCTAGGGACCACCTCCACATGCTCCCTGATCC...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp AACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAACCTCTGGTTTCAATTTaGACACAGAGGGGAAACGGT +
Preference number: 2 (lower is better)
Translates to: NLHGFHQTHGAWAGLASEPLVSI*TQRGNG
Trigger: ACCGTTTCCCCTCTGTGTCCAAATTGAAACCAGAGG...TTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR TCA 90 bp CTGTGGGTTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTTGAAAGCTGACCAATGCCCTCAGGGATaGGGTTCCACTTGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: LWVWKVKYNWRVGRLKADQCPQG*GSTCPA
Trigger: TGCTGGACAAGTGGAACCTCATCCCTGAGGGCATTG...GTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAACCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR GCA 90 bp CAGGGATTCCTTTATGGCAGCAAAAACAGACTAACACATGACTGTTTTCCCAGCCAATTCAGGGGCAGGTaGACAGTGCCTGCCTTGGCT +
Preference number: 2 (lower is better)
Translates to: QGFLYGSKNRLTHDCFPSQFRGR*TVPALA
Trigger: AGCCAAGGCAGGCACTGTGCACCTGCCCCTGAATTG...GCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATGTCTACAGGGACCTCTaGTGTCAACAGGCACACAAC +
Preference number: 2 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHVYRDL*CQQAHN
Trigger: GTTGTGTGCCTGTTGACAGCAGAGGTCCCTGTAGAC...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAACCCCCGTCGGCTGCCTaGGACTTGGGATGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKPPSAA*DLGCFG
Trigger: CCCAAAGCATCCCAAGTCCCAGGCAGCCGACGGGGG...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 90 bp CTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATTTGTGTaGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTG +
Preference number: 2 (lower is better)
Translates to: LGFPNFHDGWEGAFV*SAAVRDLHASTLLL
Trigger: CAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAACACAAATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR TCA 90 bp AGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTTGCAGGTTTCACTTGCTaGTGGAGCCACACAGCAGGT +
Preference number: 2 (lower is better)
Translates to: RKLGCPLANTNNLQWHGLAGFTC*WSHTAG
Trigger: ACCTGCTGTGTGGCTCCATCAGCAAGTGAAACCTGC...AAGGCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR GCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGTGCAGTGGCCCTTTATaGACTGGCCCCACCTCCCCA +
Preference number: 2 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALCSGPL*TGPTSP
Trigger: TGGGGAGGTGGGGCCAGTGCATAAAGGGCCACTGCA...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCCCTACAACCCCTTCCTaGAGTGGCCCTTTATGCACT +
Preference number: 2 (lower is better)
Translates to: TVTALIASKYPDLALLEFPTTPS*SGPLCT
Trigger: AGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGG...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATCACCATCCCATGCTCTaGTCCCATCAGAAAAGGAAC +
Preference number: 2 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNHHPML*SHQKRN
Trigger: GTTCCTTTTCTGATGGGAGCAGAGCATGGGATGGTG...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTCACTCCACCCTGCCATaGCAGCTAACTTCTATCCCA +
Preference number: 2 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPHSTLP*QLTSIP
Trigger: TGGGATAGAAGTTAGCTGGCATGGCAGGGTGGAGTG...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAATGGCCCTTTATGCACTaGCCCCACCTCCCCAGTCTG +
Preference number: 2 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKWPFMH*PHLPSL
Trigger: CAGACTGGGGAGGTGGGGCCAGTGCATAAAGGGCCA...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTGCCACATCGTGTCCTTaGCAGATGCCTGACGATGAT +
Preference number: 2 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPATSCP*QMPDDD
Trigger: ATCATCGTCAGGCATCTGCCAAGGACACGATGTGGC...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGCTGACCACACGGGGTTaGAGAGACACCATCCCATGC +
Preference number: 2 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALLTTRG*RDTIPC
Trigger: GCATGGGATGGTGTCTCTCCAACCCCGTGTGGTCAG...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCATTCCACCAAACACATaGAGCTTGGGCCGGACTCGC +
Preference number: 2 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGIPPNT*SLGRTR
Trigger: GCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAAT...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR CAA 90 bp ACCCTGTGGGTTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTaGAAAGCTGACTGTACACGTCGAGGCATTGATGTACGTTGTGTA +
Preference number: 2 (lower is better)
Translates to: TLWVWKVKYNWRVGR*KADCTRRGIDVRCV
Trigger: TACACAACGTACATCAATGCCTCGACGTGTACAGTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAACCCACAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR TCA 90 bp CCTAGAGGAGGTCCATGTGTCATGAGTATGTCAATGCCCTCAGGGATGAGGTTCCAATGGCATGGCCTTTaGGAAAACAGAAGTCATTTT +
Preference number: 2 (lower is better)
Translates to: PRGGPCVMSMSMPSGMRFQWHGL*ENRSHF
Trigger: AAAATGACTTCTGTTTTCTCAAAGGCCATGCCATTG...GAACCTCATCCCTGAGGGCATTGACATACTCATGACACATGGACCTCCTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR TCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATTTTGTGGTTTGGGCATaGAGCTGTTTAGAGGACTTG +
Preference number: 2 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHFVVWA*SCLEDL
Trigger: CAAGTCCTCTAAACAGCTTCATGCCCAAACCACAAA...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp CAGGGATTCCTTTATGGCAGCAAAAACAGACTAACACATGACTGTTTTCCCAGCACTGTTGGTAGGGGATaGCGAGGCTTAGAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: QGFLYGSKNRLTHDCFPSTVGRG*RGLEKE
Trigger: TTCCTTCTCTAAGCCTCGGCATCCCCTACCAACAGT...GCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR TCA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCGTGGCGACGCTCCATTaGAATATGGAATTGTCTTCA +
Preference number: 2 (lower is better)
Translates to: TVTALIASKYPDLALLEFVATLH*NMELSS
Trigger: TGAAGACAATTCCATATTTCAATGGAGCGTCGCCAC...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR TCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATATCACACAATCATCCTaGATCCCCCTAATCCTAAAC +
Preference number: 2 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHITQSS*IPLILN
Trigger: GTTTAGGATTAGGGGGATTCAGGATGATTGTGTGAT...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR TCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATAAACAGACTAACACATaGCTGTTTTCCCAGCACCTA +
Preference number: 2 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHKQTNT*LFSQHL
Trigger: TAGGTGCTGGGAAAACAGTCATGTGTTAGTCTGTTT...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTGCATCTGCCAAATGTTaGGCATTGCACTTGCCTCAT +
Preference number: 2 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPASAKC*ALHLPH
Trigger: ATGAGGCAAGTGCAATGCCCAACATTTGGCAGATGC...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR TCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCGTGCACCGTATATCCTaGATCCCTTCACTGTTACCT +
Preference number: 2 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGVHRIS*IPSLLP
Trigger: AGGTAACAGTGAAGGGATTCAGGATATACGGTGCAC...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR GCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATAGTTTTCCTAAAATCTaGAAGCAGATGCTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHSFPKI*KQMLCA
Trigger: AGCACACAGCATCTGCTTGCAGATTTTAGGAAAACT...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTCCAAATGTTGGGCATTaGACTTGCCTCATATATGCC +
Preference number: 2 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPPNVGH*TCLIYA
Trigger: GGCATATATGAGGCAAGTGCAATGCCCAACATTTGG...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGAGCTTGGCTGTCCTTTaGCGAACACTAACAATTTAC +
Preference number: 2 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQSLAVL*RTLTIY
Trigger: GTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCT...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR-3UTR CCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAAGAATTGTCTTCAGGCTaGAGGCACCTGCTGTGTCAC +
Preference number: 2 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKELSSG*RHLLCH
Trigger: GTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTC...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGCTGCTTCCTGCATCATaGCAGCTCCAATTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALLLPAS*QLQFQS
Trigger: AGACTGGAATTGGAGCTGCCATGATGCAGGAAGCAG...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 90 bp ATGTGGAGGTGGTCCCTAGAACACTCAACGTTAATGAATTTCATTTaGGGAGAAATATGTGGGAGCTTGGTAAGCATGCCAGCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: MWRWSLEHSTLMNFI*GEICGSLVSMPASL
Trigger: CAAAGAAGCTGGCATGCTTACCAAGCTCCCACATATTTCTCCCAAAATGAAATTCATTAACGTTGAGTGTTCTAGGGACCACCTCCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 90 bp ATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATCAGTACTTATaGATAAATTCCTACTCTGAACAGATAGTCTGTCAGGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: IPSPPYSFQHAYQYL*INSYSEQIVCQGLR
Trigger: CCTCAGCCCCTGACAGACTATCTGTTCAGAGTAGGAATTTATCAATAAGTACTGATAAGCATGCTGAAAGGAATATGGGGGACTGGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR TCA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCCAATGGCATGGCCTTTaGGAAAACAGAAGTCATTTT +
Preference number: 2 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVQWHGL*ENRSHF
Trigger: AAAATGACTTCTGTTTTCTCAAAGGCCATGCCATTG...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR-3UTR TCA 90 bp GTTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTTGAAAGCTGACTGTACATTTGTCAGGAGGGACTaGACATTGTCAAAGTCCTCT +
Preference number: 2 (lower is better)
Translates to: VWKVKYNWRVGRLKADCTFVRRD*TLSKSS
Trigger: AGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAA...TGTACAGTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR GCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTATACAATCCATGGCTTaGAGATCAGAAAACAAGGCC +
Preference number: 2 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPIQSMA*RSENKA
Trigger: GGCCTTGTTTTCTGATCTGCAAGCCATGGATTGTAT...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGTGTCTAGCACAGAGCTaGGGTTCAGAATTTGGATCC +
Preference number: 2 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALCLAQS*GSEFGS
Trigger: GGATCCAAATTCTGAACCCCAGCTCTGTGCTAGACA...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTCACAAACTGGTTGTGTaGTGGAGAAGGAAAGAACAT +
Preference number: 2 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPHKLVV*WRRKEH
Trigger: ATGTTCTTTCCTTCTCCACCACACAACCAGTTTGTG...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR TCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAAACAGTCAAACCCTCCTaGTTATGCTGGGTGCATAGT +
Preference number: 2 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKTVKPS*LCWVHS
Trigger: ACTATGCACCCAGCATAATCAGGAGGGTTTGACTGT...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGAAGAAGTCTTTTCCATaGCTACTTCTGTTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQKKSFP*LLLLRR
Trigger: TCTTCTCAACAGAAGTAGGCATGGAAAAGACTTCTT...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR-3UTR GCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGCCTGATTATGCTGGGTaGATAGTCCATGATTCTTGC +
Preference number: 2 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALPDYAG*IVHDSC
Trigger: GCAAGAATCATGGACTATGCACCCAGCATAATCAGG...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTGTGCAAATCTGTGTTaGTTTTTAAAACACTGCCTG +
Preference number: 2 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQCANLC*FLKHCL
Trigger: CAGGCAGTGTTTTAAAAACCAACACAGATTTGCACA...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR-3UTR CCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCAAACTGGTTGTGTGGTaGAGAAGGAAAGAACATTTT +
Preference number: 2 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTKLVVW*RRKEHF
Trigger: AAAATGTTCTTTCCTTCTCCACCACACAACCAGTTT...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp CTGTGGGTTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTTGAAAGCTGACATTGTCAAAGTCCTCTaGTTTCAATTTGGACACAGA +
Preference number: 2 (lower is better)
Translates to: LWVWKVKYNWRVGRLKADIVKVL*FQFGHR
Trigger: TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAAT...GTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAACCCACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR TCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAATGCTTGTCCTGCCCTTaGATTCATTCACAACAGTCA +
Preference number: 2 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKCLSCP*IHSQQS
Trigger: TGACTGTTGTGAATGAATTCAAGGGCAGGACAAGCA...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR GCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGCCATTTTCTTCTCAATaGAGCTTTCTTTATAGTGAG +
Preference number: 2 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQPFSSQ*SFLYSE
Trigger: CTCACTATAAAGAAAGCTGCATTGAGAAGAAAATGG...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR-3UTR CCA 90 bp CAGGGATTCCTTTATGGCAGCAAAAACAGACTAACACATGACTGTTTTCCCAGCGCATATAAGCACAGCTaGATTTCAAAGCCACTATTA +
Preference number: 2 (lower is better)
Translates to: QGFLYGSKNRLTHDCFPSAYKHS*ISKPLL
Trigger: TAATAGTGGCTTTGAAATCCAGCTGTGCTTATATGC...GCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTaGCTACCTTCTTATACAAAAAGCTCTGTACCTGCTATATTCTCT +
Preference number: 2 (lower is better)
Translates to: YLSPYLLCSLAILAF*LPSYTKSSVPAIFS
Trigger: AGAGAATATAGCAGGTACAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR TCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCATGCCTACTTCTGTTaGGAAGATTGCTATAAATTG +
Preference number: 2 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGHAYFC*EDCYKL
Trigger: CAATTTATAGCAATCTTCTCAACAGAAGTAGGCATG...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR-3UTR GCA 90 bp TGTCAGGAGGGACTGAACATTGTCAAAGTCCTCTGGTTTCAATTTGGACACAGACTGTTTAACAAGGTCTaGCATGAATTCCTTATCAAA +
Preference number: 2 (lower is better)
Translates to: CQEGLNIVKVLWFQFGHRLFNKV*HEFLIK
Trigger: TTTGATAAGGAATTCATGGCAGACCTTGTTAAACAG...TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAATGTTCAGTCCCTCCTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR CCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAACTAGATAATAAGCTTTaGTGGCGACGCTCCATTGAA +
Preference number: 2 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKLDNKL*WRRSIE
Trigger: TTCAATGGAGCGTCGCCACCAAAGCTTATTATCTAG...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGTTCTTTGAGGTTCTGTaGTGCATGATTCCATCTTCT +
Preference number: 2 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALFFEVL*CMIPSS
Trigger: AGAAGATGGAATCATGCACCACAGAACCTCAAAGAA...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAATCAGGGATTCCTTTATaGCAGCAAAAACAGACTAAC +
Preference number: 2 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKSGIPL*QQKQTN
Trigger: GTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTGA...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 90 bp CCACAGACATGGAAGCCAATTCAAAGGATAATCAGGTGTCATCTCTaGCTTTTCTCAAATTGTAAGCTTTTACAGATTCTCAAGGTACTA +
Preference number: 2 (lower is better)
Translates to: PQTWKPIQRIIRCHL*LFSNCKLLQILKVL
Trigger: TAGTACCTTGAGAATCTGTAAAAGCTTACAATTTGAGAAAAGCAAGAGATGACACCTGATTATCCTTTGAATTGGCTTCCATGTCTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 90 bp TGTCCATATGACAAGATGAAACTGAGACTTGAAAGAATAAATCTCTaGTCCAAGATTGCATTGCTAGTTAGAAGCAGAGCCAGAACTAAA +
Preference number: 2 (lower is better)
Translates to: CPYDKMKLRLERINL*SKIALLVRSRARTK
Trigger: TTTAGTTCTGGCTCTGCTTCTAACTAGCAATGCAATCTTGGACAAGAGATTTATTCTTTCAAGTCTCAGTTTCATCTTGTCATATGGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 72 bp GGCACCTGCTGTGTCACTCAGCTCCAGGCCGGCAACTaGCGCACACAATTCAGGGGCAGGTGCACAGTGCCT +
Preference number: 3 (lower is better)
Translates to: GTCCVTQLQAGN*RTQFRGRCTVP
Trigger: AGGCACTGTGCACCTGCCCCTGAATTGTGTGCGGCAGTTGCCGGCCTGGAGCTGAGTGACACAGCAGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 72 bp CTGCTACCTCCGCCTCCAGGGTTCAAGAAATTCTCCTaGCTCAGTCTCCCGAGTAGCTGGGACTACCACGCC +
Preference number: 3 (lower is better)
Translates to: LLPPPPGFKKFS*LSLPSSWDYHA
Trigger: GGCGTGGTAGTCCCAGCTACTCGGGAGACTGAGGCAGGAGAATTTCTTGAACCCTGGAGGCGGAGGTAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 72 bp CAGGCTGGAGTTCAGTGGCACGACCTCGGGGCTCACTaGTACCTCCGCCTCCAGGGTTCAAGAAATTCTCCT +
Preference number: 3 (lower is better)
Translates to: QAGVQWHDLGAH*YLRLQGSRNSP
Trigger: AGGAGAATTTCTTGAACCCTGGAGGCGGAGGTAGCAGTGAGCCCCGAGGTCGTGCCACTGAACTCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR TCA 72 bp AGCCCTCCTCCGCAGTCTTTCCTGTTGTCCACCAGGTaGGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTT +
Preference number: 3 (lower is better)
Translates to: SPPPQSFLLSTR*ASLSPPPHAFF
Trigger: AAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAACAGGAAAGACTGCGGAGGAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp GGGACTTGGGATGCTTTGGGAAGGGCCTGGTGCGGGTaGGGGCGGCCTAATAAAGCAGCTGGTCTATTAGAA +
Preference number: 3 (lower is better)
Translates to: GTWDALGRAWCG*GRPNKAAGLLE
Trigger: TTCTAATAGACCAGCTGCTTTATTAGGCCGCCCCCACCCGCACCAGGCCCTTCCCAAAGCATCCCAAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CAA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCTGCACAGTGCCTGCCTaGGCTCCCGGAGGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVCTVPA*APGGKG
Trigger: CCCCTTCCCTCCGGGAGCCAAGGCAGGCACTGTGCA...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 72 bp GGGAGAGAAGGAGCAGGAGGGACTGTTGGTAGGGGATaGCGAGGCTTAGAGAAGGAATCAGCTCTGTCTGCA +
Preference number: 3 (lower is better)
Translates to: GREGAGGTVGRG*RGLEKESALSA
Trigger: TGCAGACAGAGCTGATTCCTTCTCTAAGCCTCGGCATCCCCTACCAACAGTCCCTCCTGCTCCTTCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 72 bp GACCACACGGGGTTGGAGAGACACCATCCCATGCTCTaGTCCCATCAGAAAAGGAACGGAGCAATGGGATCA +
Preference number: 3 (lower is better)
Translates to: DHTGLERHHPML*SHQKRNGAMGS
Trigger: TGATCCCATTGCTCCGTTCCTTTTCTGATGGGAGCAGAGCATGGGATGGTGTCTCTCCAACCCCGTGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 72 bp CCCCACTGCTCTGCACATCCTTGGGACACTGCTTCCTaGATCATGGCAGCTCCAATTCCAGTCTTGGCTCAA +
Preference number: 3 (lower is better)
Translates to: PHCSAHPWDTAS*IMAAPIPVLAQ
Trigger: TTGAGCCAAGACTGGAATTGGAGCTGCCATGATGCAGGAAGCAGTGTCCCAAGGATGTGCAGAGCAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 72 bp TTCAGGACCCCACTGCTCTGCACATCCTTGGGACACTaGTTCCTGCATCATGGCAGCTCCAATTCCAGTCTT +
Preference number: 3 (lower is better)
Translates to: FRTPLLCTSLGH*FLHHGSSNSSL
Trigger: AAGACTGGAATTGGAGCTGCCATGATGCAGGAAGCAGTGTCCCAAGGATGTGCAGAGCAGTGGGGTCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CAA 90 bp AACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAACACACAGCCCACTCTTaGAAGCTCCTTTGGAACCCA +
Preference number: 3 (lower is better)
Translates to: NLHGFHQTHGAWAGLASEHTAHS*KLLWNP
Trigger: TGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTGTG...TTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR GCA 72 bp CACAGAGGGCTCCAAACATTCTGTGCTGGGAAGGCCTaGCTTAGGCCTGAGAATGTTCTCTTTGTGGTTTGG +
Preference number: 3 (lower is better)
Translates to: HRGLQTFCAGKA*LRPENVLFVVW
Trigger: CCAAACCACAAAGAGAACATTCTCAGGCCTAAGGCAGGCCTTCCCAGCACAGAATGTTTGGAGCCCTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CAA 90 bp TCATTATGTTTCAGGCATATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATGGGACTTGGGATGCTTaGGGAAGGGCCTGGTGCGGG +
Preference number: 3 (lower is better)
Translates to: SLCFRHIPSPPYSFQHAYGTWDA*GRAWCG
Trigger: CCCGCACCAGGCCCTTCCCAAAGCATCCCAAGTCCC...ATAAGCATGCTGAAAGGAATATGGGGGACTGGGAATATGCCTGAAACATAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 72 bp GCAGATCTGAACCTGGGAGCATCTAACTGCACAGCGTaGACGCATATAAGCACAGCTGGATTTCAAAGCCAC +
Preference number: 3 (lower is better)
Translates to: ADLNLGASNCTA*THISTAGFQSH
Trigger: GTGGCTTTGAAATCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAGATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp CATAACCTTCATGGATTCCACCAAACACATGGAGCTTaGGCCGGACTCGCCTCTGAACCGTGTTTAACAGCT +
Preference number: 3 (lower is better)
Translates to: HNLHGFHQTHGA*AGLASEPCLTA
Trigger: AGCTGTTAAACACGGTTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR CAA 90 bp CGGAGCAATGGGATCAGGGAGCATGTGGAGGTGGTCCCTAGAACACTCAACGTTTGTTCTCTTTGTGGTTaGGGCATGAAGCTGTTTAGA +
Preference number: 3 (lower is better)
Translates to: RSNGIREHVEVVPRTLNVCSLCG*GMKLFR
Trigger: TCTAAACAGCTTCATGCCCAAACCACAAAGAGAACA...AACGTTGAGTGTTCTAGGGACCACCTCCACATGCTCCCTGATCCCATTGCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 72 bp GTGATGGAAGCAGATCTGAACCTGGGAGCATCTAACTaGACAGCGTGCACGCATATAAGCACAGCTGGATTT +
Preference number: 3 (lower is better)
Translates to: VMEADLNLGASN*TACTHISTAGF
Trigger: AAATCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAGATCTGCTTCCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp TCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTaGGAGGGGGCATTTGTGTTGTCTGCTGCTGTGAGG +
Preference number: 3 (lower is better)
Translates to: SYWLGFPNFHDG*EGAFVLSAAVR
Trigger: CCTCACAGCAGCAGACAACACAAATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CAA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAAGAGCAGGAGGGACTGTaGGTAGGGGATGCCGAGGCT +
Preference number: 3 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKEQEGL*VGDAEA
Trigger: AGCCTCGGCATCCCCTACCAACAGTCCCTCCTGCTC...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CAA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATAGCATCTGCCAAATGTaGGGCATTGCACTTGCCTCA +
Preference number: 3 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHSICQM*GIALAS
Trigger: TGAGGCAAGTGCAATGCCCAACATTTGGCAGATGCT...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp GATAATAAGCTTTGGTGGCGACGCTCCATTGAAATATaGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTC +
Preference number: 3 (lower is better)
Translates to: DNKLWWRRSIEI*NCLQAGGTCCV
Trigger: GACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCGTCGCCACCAAAGCTTATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp CAGAAAAGGAACGGAGCAATGGGATCAGGGAGCATGTaGAGGTGGTCCCTAGAACACTCAACGTTAATGAAT +
Preference number: 3 (lower is better)
Translates to: QKRNGAMGSGSM*RWSLEHSTLMN
Trigger: ATTCATTAACGTTGAGTGTTCTAGGGACCACCTCCACATGCTCCCTGATCCCATTGCTCCGTTCCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp AGGCTGTGGAGCAACCACTTGCTAGACAGATTAGCATaGCTAAAGGGGAGCCAAGTGCTAATAACCAAGACA +
Preference number: 3 (lower is better)
Translates to: RLWSNHLLDRLA*LKGSQVLITKT
Trigger: TGTCTTGGTTATTAGCACTTGGCTCCCCTTTAGCCATGCTAATCTGTCTAGCAAGTGGTTGCTCCACAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CAA 90 bp TGTCAGGAGGGACTGAACATTGTCAAAGTCCTCTGGTTTCAATTTGGACACAGATATGGCAGGTTTCACTaGCTGATGGAGCCACACAGC +
Preference number: 3 (lower is better)
Translates to: CQEGLNIVKVLWFQFGHRYGRFH*LMEPHS
Trigger: GCTGTGTGGCTCCATCAGCAAGTGAAACCTGCCATA...TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAATGTTCAGTCCCTCCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR CAA 90 bp GTACGTTGTGTAACCGTCGGTCATGATGCCATAACCTTCATGGATTCCACCAAATCCTCTGGTTTCAATTaGGACACAGAGGGGAAACGG +
Preference number: 3 (lower is better)
Translates to: VRCVTVGHDAITFMDSTKSSGFN*DTEGKR
Trigger: CCGTTTCCCCTCTGTGTCCAAATTGAAACCAGAGGA...TTTGGTGGAATCCATGAAGGTTATGGCATCATGACCGACGGTTACACAACGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR CAA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCGGTGGCGACGCTCCATaGAAATATGGAATTGTCTTC +
Preference number: 3 (lower is better)
Translates to: TVTALIASKYPDLALLEFGGDAP*KYGIVF
Trigger: GAAGACAATTCCATATTTCAATGGAGCGTCGCCACC...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CAA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCGAAATATGTGGGAGCTaGGTAAGCATGCCAGCTTCT +
Preference number: 3 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTEICGS*VSMPAS
Trigger: AGAAGCTGGCATGCTTACCAAGCTCCCACATATTTC...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp TCAGGAACCCTGTGGGTTTGGAAGGTCAAATATAATTaGAGGGTTGGTCGGTTGAAAGCTGACTGTACACGT +
Preference number: 3 (lower is better)
Translates to: SGTLWVWKVKYN*RVGRLKADCTR
Trigger: ACGTGTACAGTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAACCCACAGGGTTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR GCA 72 bp TCTGCCAAATGTTGGGCATTGCACTTGCCTCATATATaGCTAACGTTTACCACAGTCCCGCAAAGTAAGCAA +
Preference number: 3 (lower is better)
Translates to: SAKCWALHLPHI*LTFTTVPQSKQ
Trigger: TTGCTTACTTTGCGGGACTGTGGTAAACGTTAGGCATATATGAGGCAAGTGCAATGCCCAACATTTGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR TCA 72 bp GGGATTCCTTTATGGCAGCAAAAACAGACTAACACATaGCTGTTTTCCCAGCACCTAGAACAGTGTCTAGCA +
Preference number: 3 (lower is better)
Translates to: GIPLWQQKQTNT*LFSQHLEQCLA
Trigger: TGCTAGACACTGTTCTAGGTGCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR TCA 72 bp TATACAAAAAGCTCTGTACCTGCTATATTCTCTGCCTaGACACTTTTGTCCCAGGTCTTCAAGTGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: YTKSSVPAIFSA*TLLSQVFKWLP
Trigger: AGGCAGCCACTTGAAGACCTGGGACAAAAGTGTTCAGGCAGAGAATATAGCAGGTACAGAGCTTTTTGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR TCA 72 bp TTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTTaGAAGCTGACTGTACACGTCGAGGCATTGATGTAC +
Preference number: 3 (lower is better)
Translates to: FGRSNIIGGLVG*KLTVHVEALMY
Trigger: GTACATCAATGCCTCGACGTGTACAGTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR-3UTR CAA 90 bp CAGGGATTCCTTTATGGCAGCAAAAACAGACTAACACATGACTGTTTTCCCAGCAATACAATCCATGGCTaGCAGATCAGAAAACAAGGC +
Preference number: 3 (lower is better)
Translates to: QGFLYGSKNRLTHDCFPSNTIHG*QIRKQG
Trigger: GCCTTGTTTTCTGATCTGCAAGCCATGGATTGTATT...GCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR TCA 72 bp AACTTCAGTAACTCTTGTCGCTGCTTGTCCTGCCCTTaGATTCATTCACAACAGTCAAACCCTCCTGATTAT +
Preference number: 3 (lower is better)
Translates to: NFSNSCRCLSCP*IHSQQSNPPDY
Trigger: ATAATCAGGAGGGTTTGACTGTTGTGAATGAATTCAAGGGCAGGACAAGCAGCGACAAGAGTTACTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp TCATCCCCTATCTTTCTCCTTACCTCCTCTGTTCTCTaGCTATACTGGCCTTTTTGCTACCTTCTTATACAA +
Preference number: 3 (lower is better)
Translates to: SSPIFLLTSSVL*LYWPFCYLLIQ
Trigger: TTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATAGGGGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp CATGCAAGCACACTGTTACTGAACACAGTCGCCAGATaGGCTTTTCCAACATATCAATCCAATCATGTCATT +
Preference number: 3 (lower is better)
Translates to: HASTLLLNTVAR*AFPTYQSNHVI
Trigger: AATGACATGATTGGATTGATATGTTGGAAAAGCCCATCTGGCGACTGTGTTCAGTAACAGTGTGCTTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp TTCAAGAAATTCTCCTGCCTCAGTCTCCCGAGTAGCTaGGACTACCACGCCCAACTAATTTTTGTATTTTTA +
Preference number: 3 (lower is better)
Translates to: FKKFSCLSLPSS*DYHAQLIFVFL
Trigger: TAAAAATACAAAAATTAGTTGGGCGTGGTAGTCCCAGCTACTCGGGAGACTGAGGCAGGAGAATTTCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CAA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCAAGCTTGGCTGTCCTTaGGCGAACACTAACAATTTA +
Preference number: 3 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGKLGCP*ANTNNL
Trigger: TAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTT...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
3UTR-3UTR CAA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCGAAGATTGCTATAAATaGGGACCACATCTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVEDCYK*GPHLQK
Trigger: TTTTTGCAGATGTGGTCCCAATTTATAGCAATCTTC...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR-3UTR CAA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGAAGCTCTTTAAGACCTaGAGCTCTGAGAGAATGTGT +
Preference number: 3 (lower is better)
Translates to: TIFCASEDCIDTQCKMGEKLFKT*SSERMC
Trigger: ACACATTCTCTCAGAGCTCAAGGTCTTAAAGAGCTT...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR TCA 72 bp ACTGTACCTAGATTTAACTCAAGCTCTTTAAGACCTTaGGCTCTGAGAGAATGTGTCAGTTCCTTCCGACTT +
Preference number: 3 (lower is better)
Translates to: TVPRFNSSSLRP*ALRECVSSFRL
Trigger: AAGTCGGAAGGAACTGACACATTCTCTCAGAGCTCAAGGTCTTAAAGAGCTTGAGTTAAATCTAGGTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR GCA 72 bp TTCTTATACAAAAAGCTCTGTACCTGCTATATTCTCTaGCTGAACACTTTTGTCCCAGGTCTTCAAGTGGCT +
Preference number: 3 (lower is better)
Translates to: FLYKKLCTCYIL*LNTFVPGLQVA
Trigger: AGCCACTTGAAGACCTGGGACAAAAGTGTTCAGGCAGAGAATATAGCAGGTACAGAGCTTTTTGTATAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR GCA 72 bp TGCAATTATAATGAAATCTTAACTCTCATCAAGGCCTaGAAGGATGTTGATGAGTTAGCACCTGCCTCATCC +
Preference number: 3 (lower is better)
Translates to: CNYNEILTLIKA*KDVDELAPASS
Trigger: GGATGAGGCAGGTGCTAACTCATCAACATCCTTGCAGGCCTTGATGAGAGTTAAGATTTCATTATAATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CCA 72 bp ATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTaGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTG +
Preference number: 3 (lower is better)
Translates to: IFLLTSSVLWLY*PFCYLLIQKAL
Trigger: CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR-3UTR CAA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGATGAAATACCTGCTCTaGACAGATTCCATTTCTGTA +
Preference number: 3 (lower is better)
Translates to: TIFCASEDCIDTQCKMGEMKYLL*TDSISV
Trigger: TACAGAAATGGAATCTGTCAAGAGCAGGTATTTCAT...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR GCA 72 bp TTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTaGAGTTGTACTGTCCTTGACAATAATAAACTCCTA +
Preference number: 3 (lower is better)
Translates to: FRLLMCCYTASL*SCTVLDNNKLL
Trigger: TAGGAGTTTATTATTGTCAAGGACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR GCA 72 bp AGAGGGGAAACGGTAGTAGTCCTGTTTAACAAGGTCTaGCATGAATTCCTTATCAAATGTCAGTTCATGATT +
Preference number: 3 (lower is better)
Translates to: RGETVVVLFNKV*HEFLIKCQFMI
Trigger: AATCATGAACTGACATTTGATAAGGAATTCATGGCAGACCTTGTTAAACAGGACTACTACCGTTTCCCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
3UTR TCA 72 bp GAATGCAATCAATGTCAATATGGTTTTACTTCAATGTaGACTTGTCCTGAACACATGCTTTTTCTGGTCTTG +
Preference number: 3 (lower is better)
Translates to: ECNQCQYGFTSM*TCPEHMLFLVL
Trigger: CAAGACCAGAAAAAGCATGTGTTCAGGACAAGTTCACATTGAAGTAAAACCATATTGACATTGATTGCATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GGCCCCACCTCCCCAGTCTGTTTCCTCTTCCAGCAGAGCCCTCCTCCGCAGTCTAACCCCTTCCTGCAGTaGCCCTTTATGCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPTSPVCFLFQQSPPPQSNPFLQ*PFMHWP
Trigger: GGGCCAGTGCATAAAGGGCCACTGCAGGAAGGGGTT...AGACTGCGGAGGAGGGCTCTGCTGGAAGAGGAAACAGACTGGGGAGGTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGAGCTTTGGGAAGGGCCTaGTGCGGGTGGGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LNLGASNCTACTHISTAGALGRA*CGWGRP
Trigger: AGGCCGCCCCCACCCGCACCAGGCCCTTCCCAAAGC...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GGCCCCACCTCCCCAGTCTGTTTCCTCTTCCAGCAGAGCCCTCCTCCGCAGTCTGGATCAGGGAGCATGTaGAGGTGGTCCCTAGAACAC +
Preference number: 4 (lower is better)
Translates to: GPTSPVCFLFQQSPPPQSGSGSM*RWSLEH
Trigger: GTGTTCTAGGGACCACCTCCACATGCTCCCTGATCC...AGACTGCGGAGGAGGGCTCTGCTGGAAGAGGAAACAGACTGGGGAGGTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGAAGTGCTGGGAGGCATaGGCCACCGCGCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWKCWEA*ATAPGQ
Trigger: CTGGCCAGGCGCGGTGGCTCATGCCTCCCAGCACTT...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GGAGCAGGAGGGACTGTTGGTAGGGGATGCCGAGGCTTAGAGAAGGAATCAGCTTGGCCCTTTATGCACTaGCCCCACCTCCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GAGGTVGRGCRGLEKESAWPFMH*PHLPSL
Trigger: CAGACTGGGGAGGTGGGGCCAGTGCATAAAGGGCCA...AGCTGATTCCTTCTCTAAGCCTCGGCATCCCCTACCAACAGTCCCTCCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp GTTGTCCACCAGGTGAGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTTGTCTTTGCAGTGGCCCTTTATaGACTGGCCCCACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VVHQVSFPVASSSCLLCLCSGPL*TGPTSP
Trigger: TGGGGAGGTGGGGCCAGTGCATAAAGGGCCACTGCA...AAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp GTTGTCCACCAGGTGAGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTTGTCTTCAGGCTGGAGGCACCTaGTGTGTCACTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VVHQVSFPVASSSCLLCLQAGGT*CVTQLQ
Trigger: CTGGAGCTGAGTGACACAGCAGGTGCCTCCAGCCTG...AAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp GTTGTCCACCAGGTGAGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTTGTCTTGCAGTCCCAGCTCGGTaGAATCGCCTGTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VVHQVSFPVASSSCLLCLAVPAR*NRLCGE
Trigger: TTCTCCACACAGGCGATTTCACCGAGCTGGGACTGC...AAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTCCGGATCCCGGGGATaGCTTCAGCGCCCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQSGSRG*LQRPAS
Trigger: GCTCGCCGGGCGCTGAAGGCATCCCCGGGATCCGGA...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR GCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGCTCCAGGCCGGCAACTaGCGCACACAATTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWLQAGN*RTQFRG
Trigger: GCCCCTGAATTGTGTGCGGCAGTTGCCGGCCTGGAG...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGCCAGCTGTCTACCACTaGCGCCTTCAAGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWPAVYH*RLQGPR
Trigger: ACGGGGGCCTTGAAGGCGGCAGTGGTAGACAGCTGG...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCGTGGGAGCTGGGGTGTaGCCAGCTGGAAGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTVGAGV*PAGSRP
Trigger: CGGGCGGCTTCCAGCTGGGCACACCCCAGCTCCCAC...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GGCCCCACCTCCCCAGTCTGTTTCCTCTTCCAGCAGAGCCCTCCTCCGCAGTCTTTGCTTTCTAGGGGCTaGGTCTTTGTAGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GPTSPVCFLFQQSPPPQSLLSRG*VFVASV
Trigger: AACTGAAGCTACAAAGACCCAGCCCCTAGAAAGCAA...AGACTGCGGAGGAGGGCTCTGCTGGAAGAGGAAACAGACTGGGGAGGTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp AACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAAACTTGTCTCCAGCACTaGGGACACCCGGGTGACACA +
Preference number: 4 (lower is better)
Translates to: NLHGFHQTHGAWAGLASETCLQH*GHPGDT
Trigger: TGTGTCACCCGGGTGTCCGCAGTGCTGGAGACAAGT...TTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp ACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAACGTGGCCCGCTGGTTTTaGAGTGTCATATGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TFMDSTKHMELGPDSPLNVARWF*SVIWDG
Trigger: CCCATCCCATATGACACTCCAAAACCAGCGGGCCAC...GTTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTAGGGCCTGGTGCGGGTaGGGGCGGCCTAATAAAGCA +
Preference number: 4 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTRAWCG*GRPNKA
Trigger: TGCTTTATTAGGCCGCCCCCACCCGCACCAGGCCCT...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGGGACTTGGGATGCTTTaGGAAGGGCCTGGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWGLGML*EGPGAG
Trigger: ACCCGCACCAGGCCCTTCCCAAAGCATCCCAAGTCC...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCCCCCCGTCGGCTGCCTaGGACTTGGGATGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVPPSAA*DLGCFG
Trigger: CCCAAAGCATCCCAAGTCCCAGGCAGCCGACGGGGG...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 72 bp GGTGAGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTaGTCTTCACCAAGGAGAGGCATCTTCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: GELPCRLLLMPS*SSPRRGIFLPS
Trigger: GGAAGGAAGGAAGATGCCTCTCCTTGGTGAAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp CCTAGAGGAGGTCCATGTGTCATGAGTATGTCAATGCCCTCAGGGATGAGGTTCGCAGTCCCAGCTCGGTaGAATCGCCTGTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PRGGPCVMSMSMPSGMRFAVPAR*NRLCGE
Trigger: TTCTCCACACAGGCGATTTCACCGAGCTGGGACTGC...GAACCTCATCCCTGAGGGCATTGACATACTCATGACACATGGACCTCCTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp ACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAACTGGTCGGTTGAAAGCTaGCTGTACACGTCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TFMDSTKHMELGPDSPLNWSVES*LYTSRH
Trigger: ATGCCTCGACGTGTACAGTCAGCTTTCAACCGACCA...GTTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp GGAGCAGGAGGGACTGTTGGTAGGGGATGCCGAGGCTTAGAGAAGGAATCAGCTGGAGGGGGTCATCAGTaGCTGATCTGTCTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GAGGTVGRGCRGLEKESAGGGHQ*LICLSF
Trigger: AAAGGAAAGACAGATCAGTCACTGATGACCCCCTCC...AGCTGATTCCTTCTCTAAGCCTCGGCATCCCCTACCAACAGTCCCTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp GGAGCAGGAGGGACTGTTGGTAGGGGATGCCGAGGCTTAGAGAAGGAATCAGCTTTCAGGAGTGAAATATaGGCAGGCTGTGGAGCAACC +
Preference number: 4 (lower is better)
Translates to: GAGGTVGRGCRGLEKESAFRSEI*AGCGAT
Trigger: GGTTGCTCCACAGCCTGCTCATATTTCACTCCTGAA...AGCTGATTCCTTCTCTAAGCCTCGGCATCCCCTACCAACAGTCCCTCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp AACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAACCACGGGGTCCAAGGTaGACCGTATATCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: NLHGFHQTHGAWAGLASEPRGPR*TVYPES
Trigger: GGATTCAGGATATACGGTGCACCTTGGACCCCGTGG...TTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGAGTGGCCCGCTGGTTTTaGAGTGTCATATGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LNLGASNCTACTHISTAGVARWF*SVIWDG
Trigger: CCCATCCCATATGACACTCCAAAACCAGCGGGCCAC...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GGAGCAGGAGGGACTGTTGGTAGGGGATGCCGAGGCTTAGAGAAGGAATCAGCTCTGCTTCCTGCATCATaGCAGCTCCAATTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GAGGTVGRGCRGLEKESALLPAS*QLQFQS
Trigger: AGACTGGAATTGGAGCTGCCATGATGCAGGAAGCAG...AGCTGATTCCTTCTCTAAGCCTCGGCATCCCCTACCAACAGTCCCTCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp CACAGCCCACTCTTTGAAGCTCCTTTGGAACCCAGTCTCGAAAACCTAGAGGAGGCAGGTTTCACTTGCTaGTGGAGCCACACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HSPLFEAPLEPSLENLEEAGFTC*WSHTAG
Trigger: ACCTGCTGTGTGGCTCCATCAGCAAGTGAAACCTGC...CTCCTCTAGGTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR GCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGTCCGGATCCCGGGGATaGCTTCAGCGCCCGGCGAGC +
Preference number: 4 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALSGSRG*LQRPAS
Trigger: GCTCGCCGGGCGCTGAAGGCATCCCCGGGATCCGGA...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CGGAGCAATGGGATCAGGGAGCATGTGGAGGTGGTCCCTAGAACACTCAACGTTGTCGCCTCCTCCTCATaGCTTCTTTGTCTTCACCAA +
Preference number: 4 (lower is better)
Translates to: RSNGIREHVEVVPRTLNVVASSS*LLCLHQ
Trigger: TTGGTGAAGACAAAGAAGGCATGAGGAGGAGGCGAC...AACGTTGAGTGTTCTAGGGACCACCTCCACATGCTCCCTGATCCCATTGCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCCAGGTGCACAGTGCCTaGCTTGGCTCCCGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TVTALIASKYPDLALLEFQVHSA*LGSRRE
Trigger: TTCCCTCCGGGAGCCAAGGCAGGCACTGTGCACCTG...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCAAGGCCCCCGTCGGCTaGCTGGGACTTGGGATGCTT +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTKAPVG*LGLGML
Trigger: AAGCATCCCAAGTCCCAGGCAGCCGACGGGGGCCTT...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CACAGCCCACTCTTTGAAGCTCCTTTGGAACCCAGTCTCGAAAACCTAGAGGAGCAAACACATGGAGCTTaGGCCGGACTCGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: HSPLFEAPLEPSLENLEEQTHGA*AGLASE
Trigger: TTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTG...CTCCTCTAGGTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGATTCCACCAAACACATaGAGCTTGGGCCGGACTCGC +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWIPPNT*SLGRTR
Trigger: GCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAAT...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATCTCTGTCTGCAGACCTaGGGTGGAGGGGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHLCLQT*GGGGHQ
Trigger: CTGATGACCCCCTCCACCCCAGGTCTGCAGACAGAG...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp ACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAACATGGTAACTTTGCCTTaGGAAGGAATCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: TFMDSTKHMELGPDSPLNMVTLP*EGIPCA
Trigger: GGCACATGGGATTCCTTCTCAAGGCAAAGTTACCAT...GTTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp CCTAGAGGAGGTCCATGTGTCATGAGTATGTCAATGCCCTCAGGGATGAGGTTCAAACTTCTTAACCTCTaGGGGCAGTCCCAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: PRGGPCVMSMSMPSGMRFKLLNL*GQSQLG
Trigger: ACCGAGCTGGGACTGCCCTCAGAGGTTAAGAAGTTT...GAACCTCATCCCTGAGGGCATTGACATACTCATGACACATGGACCTCCTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGATTGTCCAGCAGAGACTaGCCTCTGGGTAGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: LNLGASNCTACTHISTAGLSSRD*PLGRLK
Trigger: CTTTAACCTACCCAGAGGTCAGTCTCTGCTGGACAA...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TTAAACCACGGGGTCCAAGGTGCACCGTATATCCTGAATCCCTTCACTGTTACCCAATGCCCTCAGGGATaGGGTTCCACTTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LNHGVQGAPYILNPFTVTQCPQG*GSTCPA
Trigger: TGCTGGACAAGTGGAACCTCATCCCTGAGGGCATTG...GGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGGACCCCGTGGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGACACAGCCCACTCTTTaGAGCTCCTTTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWTQPTL*SSFGTQ
Trigger: CTGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTGT...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCGGCCGGACTCGCCTCTaGACCGTGTTTAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVGRTRL*TVFNSS
Trigger: GGAGCTGTTAAACACGGTTCAGAGGCGAGTCCGGCC...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCGGCCGGACTCGCCTCTaGACCGTGTTTAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTGRTRL*TVFNSS
Trigger: GGAGCTGTTAAACACGGTTCAGAGGCGAGTCCGGCC...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp GTTGTCCACCAGGTGAGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTTGTCTTCTTTCCAAATTTTCATaGTGGGTGGGAGGGGGCATT +
Preference number: 4 (lower is better)
Translates to: VVHQVSFPVASSSCLLCLLSKFS*WVGGGI
Trigger: AATGCCCCCTCCCACCCATCATGAAAATTTGGAAAG...AAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp GTACGTTGTGTAACCGTCGGTCATGATGCCATAACCTTCATGGATTCCACCAAACTGCGGACACCCGGGTaGCACATTCTTTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VRCVTVGHDAITFMDSTKLRTPG*HILSER
Trigger: CCTCTCCGAAAGAATGTGTCACCCGGGTGTCCGCAG...TTTGGTGGAATCCATGAAGGTTATGGCATCATGACCGACGGTTACACAACGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR GCA 90 bp CACAGCCCACTCTTTGAAGCTCCTTTGGAACCCAGTCTCGAAAACCTAGAGGAGAGTGTGTGTCTGAGATaGAGACAAACCGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: HSPLFEAPLEPSLENLEESVCLR*RQTACG
Trigger: GCCACACGCGGTTTGTCTGCATCTCAGACACACACT...CTCCTCTAGGTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp CCTAGAGGAGGTCCATGTGTCATGAGTATGTCAATGCCCTCAGGGATGAGGTTCAGATGGAAGCAGGCATaGTGCGTTTCAGCCAACCTC +
Preference number: 4 (lower is better)
Translates to: PRGGPCVMSMSMPSGMRFRWKQA*CVSANL
Trigger: GAGGTTGGCTGAAACGCACCATGCCTGCTTCCATCT...GAACCTCATCCCTGAGGGCATTGACATACTCATGACACATGGACCTCCTCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp GGAGCAGGAGGGACTGTTGGTAGGGGATGCCGAGGCTTAGAGAAGGAATCAGCTTTTTGGAGTGTCATATaGGATGGGGTCGACCATATG +
Preference number: 4 (lower is better)
Translates to: GAGGTVGRGCRGLEKESAFWSVI*DGVDHM
Trigger: CATATGGTCGACCCCATCCCATATGACACTCCAAAA...AGCTGATTCCTTCTCTAAGCCTCGGCATCCCCTACCAACAGTCCCTCCTGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCCAGACAAACCGCGTGTaGCCCGCTGGTTTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVQTNRV*PAGFGV
Trigger: CACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTG...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTGGGAGCATGTGGAGGTaGTCCCTAGAACACTCAACG +
Preference number: 4 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTGSMWR*SLEHST
Trigger: CGTTGAGTGTTCTAGGGACCACCTCCACATGCTCCC...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGGCAGTCCCAGCTCGGTaGAATCGCCTGTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQAVPAR*NRLCGE
Trigger: TTCTCCACACAGGCGATTTCACCGAGCTGGGACTGC...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGAGTGCACCGTATATCCTaGATCCCTTCACTGTTACCT +
Preference number: 4 (lower is better)
Translates to: LNLGASNCTACTHISTAGVHRIS*IPSLLP
Trigger: AGGTAACAGTGAAGGGATTCAGGATATACGGTGCAC...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp CCTAGAGGAGGTCCATGTGTCATGAGTATGTCAATGCCCTCAGGGATGAGGTTCTTGTCCAGCAGAGACTaGCCTCTGGGTAGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: PRGGPCVMSMSMPSGMRFLSSRD*PLGRLK
Trigger: CTTTAACCTACCCAGAGGTCAGTCTCTGCTGGACAA...GAACCTCATCCCTGAGGGCATTGACATACTCATGACACATGGACCTCCTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp TGTCAGGAGGGACTGAACATTGTCAAAGTCCTCTGGTTTCAATTTGGACACAGAGGCCGGACTCGCCTCTaGACCGTGTTTAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: CQEGLNIVKVLWFQFGHRGRTRL*TVFNSS
Trigger: GGAGCTGTTAAACACGGTTCAGAGGCGAGTCCGGCC...TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAATGTTCAGTCCCTCCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR GCA 90 bp AGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTTATTTCTTTCCCGGGCTaGGCTCCGGATCCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: RKLGCPLANTNNLQWHGLISFPG*APDPGD
Trigger: ATCCCCGGGATCCGGAGCGCAGCCCGGGAAAGAAAT...AAGGCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR GCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTATTTCTTTCCCGGGCTaGGCTCCGGATCCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPISFPG*APDPGD
Trigger: ATCCCCGGGATCCGGAGCGCAGCCCGGGAAAGAAAT...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp ACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAACTTAGGGTTTCTTCCATaGTTGCAATGGGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: TFMDSTKHMELGPDSPLNLGFLP*LQWETR
Trigger: CCTGGTTTCCCATTGCAAGCATGGAAGAAACCCTAA...GTTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTATGAGCCACCGCGCCTaGCCAGGATACCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPMSHRA*PGYPGS
Trigger: AGAACCTGGGTATCCTGGCCAGGCGCGGTGGCTCAT...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCCAATGCCCTCAGGGATaGGGTTCCACTTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVQCPQG*GSTCPA
Trigger: TGCTGGACAAGTGGAACCTCATCCCTGAGGGCATTG...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp CCTAGAGGAGGTCCATGTGTCATGAGTATGTCAATGCCCTCAGGGATGAGGTTCTACACGTCGAGGCATTaGTGTACGTTGTGTAACCGT +
Preference number: 4 (lower is better)
Translates to: PRGGPCVMSMSMPSGMRFYTSRH*CTLCNR
Trigger: ACGGTTACACAACGTACATCAATGCCTCGACGTGTA...GAACCTCATCCCTGAGGGCATTGACATACTCATGACACATGGACCTCCTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGACAGTCAAACCCTCCTaGTTATGCTGGGTGCATAGT +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWTVKPS*LCWVHS
Trigger: ACTATGCACCCAGCATAATCAGGAGGGTTTGACTGT...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTCACCATCCCATGCTCTaGTCCCATCAGAAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTHHPML*SHQKRN
Trigger: GTTCCTTTTCTGATGGGAGCAGAGCATGGGATGGTG...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGAGAGTGTCATATGGGATaGGGTCGACCATATGTACAT +
Preference number: 4 (lower is better)
Translates to: LNLGASNCTACTHISTAGECHMG*GRPYVH
Trigger: ATGTACATATGGTCGACCCCATCCCATATGACACTC...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp AGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTTCAGACAAACCGCGTGTaGCCCGCTGGTTTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: RKLGCPLANTNNLQWHGLQTNRV*PAGFGV
Trigger: CACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTG...AAGGCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp CCTAGAGGAGGTCCATGTGTCATGAGTATGTCAATGCCCTCAGGGATGAGGTTCCCTCTGGTTTCAATTTaGACACAGAGGGGAAACGGT +
Preference number: 4 (lower is better)
Translates to: PRGGPCVMSMSMPSGMRFPLVSI*TQRGNG
Trigger: ACCGTTTCCCCTCTGTGTCCAAATTGAAACCAGAGG...GAACCTCATCCCTGAGGGCATTGACATACTCATGACACATGGACCTCCTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCCAAACACATGGAGCTTaGGCCGGACTCGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TVTALIASKYPDLALLEFQTHGA*AGLASE
Trigger: TTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTG...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp AACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAAGCTTCAGGAACCCTGTaGGTTTGGAAGGTCAAATAT +
Preference number: 4 (lower is better)
Translates to: NLHGFHQTHGAWAGLASEASGTL*VWKVKY
Trigger: ATATTTGACCTTCCAAACCCACAGGGTTCCTGAAGC...TTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGTTGTCCTCAGTGCCTTaGAGATGCTCACAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWLSSVP*RCSQGL
Trigger: TAAACCCTGTGAGCATCTCCAAGGCACTGAGGACAA...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GTTGTCCACCAGGTGAGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTTGTCTTCTAGATAATAAGCTTTaGTGGCGACGCTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: VVHQVSFPVASSSCLLCLLDNKL*WRRSIE
Trigger: TTCAATGGAGCGTCGCCACCAAAGCTTATTATCTAG...AAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGGAGGAAGGTGGGAGCTaGGGTGTGCCCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALEEGGS*GVPSWK
Trigger: CTTCCAGCTGGGCACACCCCAGCTCCCACCTTCCTC...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GAATGTTCTCTTTGTGGTTTGGGCATGAAGCTGTTTAGAGGACTTGGGAGAGAACTGACCACACGGGGTTaGAGAGACACCATCCCATGC +
Preference number: 4 (lower is better)
Translates to: ECSLCGLGMKLFRGLGRELTTRG*RDTIPC
Trigger: GCATGGGATGGTGTCTCTCCAACCCCGTGTGGTCAG...TTCTCTCCCAAGTCCTCTAAACAGCTTCATGCCCAAACCACAAAGAGAACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATTCTGGAGTGTGTGTCTaGGATGCAGACAAACCGCGT +
Preference number: 4 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNSGVCV*DADKPR
Trigger: ACGCGGTTTGTCTGCATCTCAGACACACACTCCAGA...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTCAATGCCCTCAGGGATaGGGTTCCACTTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPQCPQG*GSTCPA
Trigger: TGCTGGACAAGTGGAACCTCATCCCTGAGGGCATTG...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGACACAGCCCACTCTTTaGAGCTCCTTTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQTQPTL*SSFGTQ
Trigger: CTGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTGT...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp TGTCAGGAGGGACTGAACATTGTCAAAGTCCTCTGGTTTCAATTTGGACACAGAGGAGGGTTGGTCGGTTaGAAGCTGACTGTACACGTC +
Preference number: 4 (lower is better)
Translates to: CQEGLNIVKVLWFQFGHRGGLVG*KLTVHV
Trigger: GACGTGTACAGTCAGCTTTCAACCGACCAACCCTCC...TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAATGTTCAGTCCCTCCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGAATCACACAATCATCCTaGATCCCCCTAATCCTAAAC +
Preference number: 4 (lower is better)
Translates to: LNLGASNCTACTHISTAGITQSS*IPLILN
Trigger: GTTTAGGATTAGGGGGATTCAGGATGATTGTGTGAT...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCAGACTGAGGGTGATATaGTACCCCCAGCTGTCTACC +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTRLRVI*YPQLST
Trigger: GGTAGACAGCTGGGGGTATCATATCACCCTCAGTCT...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCAGTGTGTGTCTGAGATaGAGACAAACCGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVSVCLR*RQTACG
Trigger: GCCACACGCGGTTTGTCTGCATCTCAGACACACACT...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR GCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCAGTGTGTGTCTGAGATaGAGACAAACCGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTSVCLR*RQTACG
Trigger: GCCACACGCGGTTTGTCTGCATCTCAGACACACACT...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTCCACGGGGTCCAAGGTaGACCGTATATCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPPRGPR*TVYPES
Trigger: GGATTCAGGATATACGGTGCACCTTGGACCCCGTGG...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCGTCTACAGGGACCTCTaGTGTCAACAGGCACACAAC +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTVYRDL*CQQAHN
Trigger: GTTGTGTGCCTGTTGACAGCAGAGGTCCCTGTAGAC...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGAGTGTGCCCTGTATGTaGCTGTGTGTAATACTCCTA +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWSVPCM*LCVILL
Trigger: TAGGAGTATTACACACAGGCACATACAGGGCACACT...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTTGTACATGTGGAGGCTaGAATCTGCTCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTCTCGG*NLLWLM
Trigger: CATCAACCAGAGCAGATTCCAGCCTCCACATGTACA...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp TTAAACCACGGGGTCCAAGGTGCACCGTATATCCTGAATCCCTTCACTGTTACCTGTACATGTGGAGGCTaGAATCTGCTCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: LNHGVQGAPYILNPFTVTCTCGG*NLLWLM
Trigger: CATCAACCAGAGCAGATTCCAGCCTCCACATGTACA...GGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGGACCCCGTGGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp CCTAGAGGAGGTCCATGTGTCATGAGTATGTCAATGCCCTCAGGGATGAGGTTCTTTTGGAGTGTCATATaGGATGGGGTCGACCATATG +
Preference number: 4 (lower is better)
Translates to: PRGGPCVMSMSMPSGMRFFWSVI*DGVDHM
Trigger: CATATGGTCGACCCCATCCCATATGACACTCCAAAA...GAACCTCATCCCTGAGGGCATTGACATACTCATGACACATGGACCTCCTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGCCGCGTGTGGCCCGCTaGTTTTGGAGTGTCATATGG +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGEPRVAR*FWSVIW
Trigger: CCATATGACACTCCAAAACCAGCGGGCCACACGCGG...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CCA 90 bp CCTTCACTGTTACCTCCGAATCTTGTAAGTAAATACTGTTTGTCAGGAGGGACTCCGCGTGTGGCCCGCTaGTTTTGGAGTGTCATATGG +
Preference number: 4 (lower is better)
Translates to: PSLLPPNLVSKYCLSGGTPRVAR*FWSVIW
Trigger: CCATATGACACTCCAAAACCAGCGGGCCACACGCGG...AGTCCCTCCTGACAAACAGTATTTACTTACAAGATTCGGAGGTAACAGTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCAGACAAACCGCGTGTaGCCCGCTGGTTTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGQTNRV*PAGFGV
Trigger: CACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTG...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTGGATACCATCTGTTCTaGAGTGTGTGTCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTGYHLF*SVCLRC
Trigger: GCATCTCAGACACACACTCCAGAACAGATGGTATCC...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CACAGCCCACTCTTTGAAGCTCCTTTGGAACCCAGTCTCGAAAACCTAGAGGAGTCTTTGAAGCTCCTTTaGAACCCAGTCTCGAAAACC +
Preference number: 4 (lower is better)
Translates to: HSPLFEAPLEPSLENLEESLKLL*NPVSKT
Trigger: GGTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGA...CTCCTCTAGGTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp AGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTTATTCCACCAAACACATaGAGCTTGGGCCGGACTCGC +
Preference number: 4 (lower is better)
Translates to: RKLGCPLANTNNLQWHGLIPPNT*SLGRTR
Trigger: GCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAAT...AAGGCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp GTTGTCCACCAGGTGAGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTTGTCTTGATAATAAGCTTTGGTaGCGACGCTCCATTGAAATA +
Preference number: 4 (lower is better)
Translates to: VVHQVSFPVASSSCLLCLDNKLW*RRSIEI
Trigger: TATTTCAATGGAGCGTCGCCACCAAAGCTTATTATC...AAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCGCCACATCGTGTCCTTaGCAGATGCCTGACGATGAT +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTATSCP*QMPDDD
Trigger: ATCATCGTCAGGCATCTGCCAAGGACACGATGTGGC...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATTCCCAGGTCTTCAAGTaGCTGCCTCATCCACATCAC +
Preference number: 4 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNSQVFK*LPHPHH
Trigger: GTGATGTGGATGAGGCAGCCACTTGAAGACCTGGGA...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp GAATGTTCTCTTTGTGGTTTGGGCATGAAGCTGTTTAGAGGACTTGGGAGAGAAAAACTTCTTAACCTCTaGGGGCAGTCCCAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: ECSLCGLGMKLFRGLGREKLLNL*GQSQLG
Trigger: ACCGAGCTGGGACTGCCCTCAGAGGTTAAGAAGTTT...TTCTCTCCCAAGTCCTCTAAACAGCTTCATGCCCAAACCACAAAGAGAACATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTCCAGCAGAGACTaGCCTCTGGGTAGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQLSSRD*PLGRLK
Trigger: CTTTAACCTACCCAGAGGTCAGTCTCTGCTGGACAA...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCGGAGGGTTGGTCGGTTaGAAGCTGACTGTACACGTC +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGGGLVG*KLTVHV
Trigger: GACGTGTACAGTCAGCTTTCAACCGACCAACCCTCC...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR TCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGAAACAGACTAACACATaGCTGTTTTCCCAGCACCTA +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWKQTNT*LFSQHL
Trigger: TAGGTGCTGGGAAAACAGTCATGTGTTAGTCTGTTT...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGATCCAATCATGTCATTaGCCACCCCCACCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALIQSCH*PPPPPP
Trigger: TGGCGGGGGTGGGGGTGGTCAATGACATGATTGGAT...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGACACTCTATGTCCATATaGCAAGATGAAACTGAGACT +
Preference number: 4 (lower is better)
Translates to: LNLGASNCTACTHISTAGHSMSI*QDETET
Trigger: AGTCTCAGTTTCATCTTGTCATATGGACATAGAGTG...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TTAAACCACGGGGTCCAAGGTGCACCGTATATCCTGAATCCCTTCACTGTTACCTGCTACCTTCTCCTCTaGAACTCATGCATTAGGGTT +
Preference number: 4 (lower is better)
Translates to: LNHGVQGAPYILNPFTVTCYLLL*NSCIRV
Trigger: AACCCTAATGCATGAGTTTCAGAGGAGAAGGTAGCA...GGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGGACCCCGTGGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR GCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCCACGGGGTCCAAGGTaGACCGTATATCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGPRGPR*TVYPES
Trigger: GGATTCAGGATATACGGTGCACCTTGGACCCCGTGG...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR GCA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTTATTTTTGTCCTCAGTaGCTTGGAGATGCTCACAGG +
Preference number: 4 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTYFCPQ*LGDAHR
Trigger: CCTGTGAGCATCTCCAAGGCACTGAGGACAAAAATA...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCACTGTTGGTAGGGGATaGCGAGGCTTAGAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: TVTALIASKYPDLALLEFTVGRG*RGLEKE
Trigger: TTCCTTCTCTAAGCCTCGGCATCCCCTACCAACAGT...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCGGCATTTGTGTTGTCTaGTGCTGTGAGGGATCTTCA +
Preference number: 4 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVGICVV*CCEGSS
Trigger: TGAAGATCCCTCACAGCAGCAGACAACACAAATGCC...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGGTGGCCCGCTGGTTTTaGAGTGTCATATGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGEVARWF*SVIWDG
Trigger: CCCATCCCATATGACACTCCAAAACCAGCGGGCCAC...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CCA 90 bp TCATTATGTTTCAGGCATATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATCCGCGTGTGGCCCGCTaGTTTTGGAGTGTCATATGG +
Preference number: 4 (lower is better)
Translates to: SLCFRHIPSPPYSFQHAYPRVAR*FWSVIW
Trigger: CCATATGACACTCCAAAACCAGCGGGCCACACGCGG...ATAAGCATGCTGAAAGGAATATGGGGGACTGGGAATATGCCTGAAACATAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCAAACACATGGAGCTTaGGCCGGACTCGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGQTHGA*AGLASE
Trigger: TTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTG...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp CCTTCACTGTTACCTCCGAATCTTGTAAGTAAATACTGTTTGTCAGGAGGGACTATTCCACCAAACACATaGAGCTTGGGCCGGACTCGC +
Preference number: 4 (lower is better)
Translates to: PSLLPPNLVSKYCLSGGTIPPNT*SLGRTR
Trigger: GCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAAT...AGTCCCTCCTGACAAACAGTATTTACTTACAAGATTCGGAGGTAACAGTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp ACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAACAAGGTCAAATATAATTaGAGGGTTGGTCGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: TFMDSTKHMELGPDSPLNKVKYN*RVGRLK
Trigger: TTTCAACCGACCAACCCTCCAATTATATTTGACCTT...GTTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp TCATTATGTTTCAGGCATATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATTCTGCAGACCTGGGGTaGAGGGGGTCATCAGTGACT +
Preference number: 4 (lower is better)
Translates to: SLCFRHIPSPPYSFQHAYSADLG*RGSSVT
Trigger: AGTCACTGATGACCCCCTCCACCCCAGGTCTGCAGA...ATAAGCATGCTGAAAGGAATATGGGGGACTGGGAATATGCCTGAAACATAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGATTCTTTGAGGTTCTGTaGTGCATGATTCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LNLGASNCTACTHISTAGFFEVL*CMIPSS
Trigger: AGAAGATGGAATCATGCACCACAGAACCTCAAAGAA...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTTTTGGGAGAAATATGTaGGAGCTTGGTAAGCATGCC +
Preference number: 4 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTFGRNM*ELGKHA
Trigger: GGCATGCTTACCAAGCTCCCACATATTTCTCCCAAA...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATAAAGGAACGGAGCAATaGGATCAGGGAGCATGTGGA +
Preference number: 4 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNKGTEQ*DQGACG
Trigger: TCCACATGCTCCCTGATCCCATTGCTCCGTTCCTTT...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGATCAGGGATTCCTTTATaGCAGCAAAAACAGACTAAC +
Preference number: 4 (lower is better)
Translates to: LNLGASNCTACTHISTAGSGIPL*QQKQTN
Trigger: GTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTGA...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATCTAGACAGATTAGCATaGCTAAAGGGGAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHLDRLA*LKGSQV
Trigger: CACTTGGCTCCCCTTTAGCCATGCTAATCTGTCTAG...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GTTGTCCACCAGGTGAGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTTGTCTTAAACTGGTTGTGTGGTaGAGAAGGAAAGAACATTTT +
Preference number: 4 (lower is better)
Translates to: VVHQVSFPVASSSCLLCLKLVVW*RRKEHF
Trigger: AAAATGTTCTTTCCTTCTCCACCACACAACCAGTTT...AAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATACCTCCTCTGTTCTCTaGCTATACTGGCCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHTSSVL*LYWPFC
Trigger: GCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGT...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATATGGTAACTTTGCCTTaGGAAGGAATCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNMVTLP*EGIPCA
Trigger: GGCACATGGGATTCCTTCTCAAGGCAAAGTTACCAT...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGTCTGGAGTGTGTGTCTaGGATGCAGACAAACCGCGT +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGESGVCV*DADKPR
Trigger: ACGCGGTTTGTCTGCATCTCAGACACACACTCCAGA...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCAAACTTCTTAACCTCTaGGGGCAGTCCCAGCTCGGT +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGKLLNL*GQSQLG
Trigger: ACCGAGCTGGGACTGCCCTCAGAGGTTAAGAAGTTT...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR TCA 90 bp GTACGTTGTGTAACCGTCGGTCATGATGCCATAACCTTCATGGATTCCACCAAATGTAACCGTCGGTCATaGTGCCATAACCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: VRCVTVGHDAITFMDSTKCNRRS*CHNLHG
Trigger: TCCATGAAGGTTATGGCATCATGACCGACGGTTACA...TTTGGTGGAATCCATGAAGGTTATGGCATCATGACCGACGGTTACACAACGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGTGGTCGGTTGAAAGCTaGCTGTACACGTCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGEWSVES*LYTSRH
Trigger: ATGCCTCGACGTGTACAGTCAGCTTTCAACCGACCA...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCTGCTTGTCCTGCCCTTaGATTCATTCACAACAGTCA +
Preference number: 4 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVCLSCP*IHSQQS
Trigger: TGACTGTTGTGAATGAATTCAAGGGCAGGACAAGCA...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCGCTGTGCATTTACCTaGACTTGTCTCCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGRCAFT*TCLQHC
Trigger: GCAGTGCTGGAGACAAGTTCAGGTAAATGCACAGCG...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR GCA 90 bp AGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTTTCATCAATACCGCTGTaGATTTCTTTCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RKLGCPLANTNNLQWHGLSSIPL*ISFPGC
Trigger: GCAGCCCGGGAAAGAAATGCACAGCGGTATTGATGA...AAGGCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR GCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAACAATTCAGGGGCAGGTaGACAGTGCCTGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKQFRGR*TVPALA
Trigger: AGCCAAGGCAGGCACTGTGCACCTGCCCCTGAATTG...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CTGTCTTTCCTTTTCTCCTACAACCCCTTCCTGCAGTGGCCCTTTATGCACTGGCACTTATTAAGCATCTaGCAAATGTTGGGCATTGCA +
Preference number: 4 (lower is better)
Translates to: LSFLFSYNPFLQWPFMHWHLLSI*QMLGIA
Trigger: TGCAATGCCCAACATTTGGCAGATGCTTAATAAGTG...CCAGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGGAGAAAAGGAAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATATTTGTGTTGTCTGCTaGTGTGAGGGATCTTCATGC +
Preference number: 4 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHICVVC*CEGSSC
Trigger: GCATGAAGATCCCTCACAGCAGCAGACAACACAAAT...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCAGATGGAAGCAGGCATaGTGCGTTTCAGCCAACCTC +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGRWKQA*CVSANL
Trigger: GAGGTTGGCTGAAACGCACCATGCCTGCTTCCATCT...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCGGATACCATCTGTTCTaGAGTGTGTGTCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVGYHLF*SVCLRC
Trigger: GCATCTCAGACACACACTCCAGAACAGATGGTATCC...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CCA 90 bp GTACGTTGTGTAACCGTCGGTCATGATGCCATAACCTTCATGGATTCCACCAAAGGATACCATCTGTTCTaGAGTGTGTGTCTGAGATGC +
Preference number: 4 (lower is better)
Translates to: VRCVTVGHDAITFMDSTKGYHLF*SVCLRC
Trigger: GCATCTCAGACACACACTCCAGAACAGATGGTATCC...TTTGGTGGAATCCATGAAGGTTATGGCATCATGACCGACGGTTACACAACGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCCCTCTGGTTTCAATTTaGACACAGAGGGGAAACGGT +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTPLVSI*TQRGNG
Trigger: ACCGTTTCCCCTCTGTGTCCAAATTGAAACCAGAGG...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCTCTTTGAAGCTCCTTTaGAACCCAGTCTCGAAAACC +
Preference number: 4 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVSLKLL*NPVSKT
Trigger: GGTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGA...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GTCGGTCATGATGCCATAACCTTCATGGATTCCACCAAACACATGGAGCTTGGGGGAACCCTGTGGGTTTaGAAGGTCAAATATAATTGG +
Preference number: 4 (lower is better)
Translates to: VGHDAITFMDSTKHMELGGTLWV*KVKYNW
Trigger: CCAATTATATTTGACCTTCCAAACCCACAGGGTTCC...CCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGTTATGGCATCATGACCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGAGCATATAAGCACAGCTaGATTTCAAAGCCACTATTA +
Preference number: 4 (lower is better)
Translates to: LNLGASNCTACTHISTAGAYKHS*ISKPLL
Trigger: TAATAGTGGCTTTGAAATCCAGCTGTGCTTATATGC...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCTGTCTAGCACAGAGCTaGGGTTCAGAATTTGGATCC +
Preference number: 4 (lower is better)
Translates to: TVTALIASKYPDLALLEFCLAQS*GSEFGS
Trigger: GGATCCAAATTCTGAACCCCAGCTCTGTGCTAGACA...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CAGGGATTCCTTTATGGCAGCAAAAACAGACTAACACATGACTGTTTTCCCAGCGAGAAAAGAATGGTTTaGGGGGCCACATTCAGGACC +
Preference number: 4 (lower is better)
Translates to: QGFLYGSKNRLTHDCFPSEKRMV*GATFRT
Trigger: GGTCCTGAATGTGGCCCCCCAAACCATTCTTTTCTC...GCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCTTTGTCAGGAGGGACTaGACATTGTCAAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVFVRRD*TLSKSS
Trigger: AGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAA...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp CCTCCGAATCTTGTAAGTAAATACTGTTTGTCAGGAGGGACTGAACATTGTCAAACACAGCCCACTCTTTaGAGCTCCTTTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: PPNLVSKYCLSGGTEHCQTQPTL*SSFGTQ
Trigger: CTGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTGT...TTGACAATGTTCAGTCCCTCCTGACAAACAGTATTTACTTACAAGATTCGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp GTCGGTCATGATGCCATAACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCAATGGCATGGCCTTTaGGAAAACAGAAGTCATTTT +
Preference number: 4 (lower is better)
Translates to: VGHDAITFMDSTKHMELGQWHGL*ENRSHF
Trigger: AAAATGACTTCTGTTTTCTCAAAGGCCATGCCATTG...CCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGTTATGGCATCATGACCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGAGCTCTTTAAGACCTTaGGCTCTGAGAGAATGTGTC +
Preference number: 4 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQSSLRP*ALRECV
Trigger: GACACATTCTCTCAGAGCTCAAGGTCTTAAAGAGCT...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATTTTGTGGTTTGGGCATaGAGCTGTTTAGAGGACTTG +
Preference number: 4 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNFVVWA*SCLEDL
Trigger: CAAGTCCTCTAAACAGCTTCATGCCCAAACCACAAA...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCGATAAATTCCTACTCTaGACAGATAGTCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVDKFLL*TDSLSG
Trigger: CCCTGACAGACTATCTGTTCAGAGTAGGAATTTATC...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATTGGGTGCATAGTCCATaGTTCTTGCCTTCACTCATA +
Preference number: 4 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNWVHSP*FLPSLI
Trigger: TATGAGTGAAGGCAAGAATCATGGACTATGCACCCA...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCCGACTTCTGATGTGTTaGTATACAGCATCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVRLLMC*YTASLC
Trigger: GCAAAGGGATGCTGTATAGCAACACATCAGAAGTCG...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR GCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGCCTACAACCCCTTCCTaGAGTGGCCCTTTATGCACT +
Preference number: 4 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALPTTPS*SGPLCT
Trigger: AGTGCATAAAGGGCCACTGCAGGAAGGGGTTGTAGG...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAACGTGTCCTTGGCAGATaGCTGACGATGATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKRVLGR*LTMMLA
Trigger: AGCCAGCATCATCGTCAGGCATCTGCCAAGGACACG...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAACATTCAGGACCCCACTaGTCTGCACATCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKHSGPH*SAHPWD
Trigger: GTCCCAAGGATGTGCAGAGCAGTGGGGTCCTGAATG...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CTGTGGGTTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTTGAAAGCTGACGGTTTCTTCCATGCTTaGAATGGGAAACCAGGTCTA +
Preference number: 4 (lower is better)
Translates to: LWVWKVKYNWRVGRLKADGFFHA*NGKPGL
Trigger: TAGACCTGGTTTCCCATTGCAAGCATGGAAGAAACC...GTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAACCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCTTTTGGAGTGTCATATaGGATGGGGTCGACCATATG +
Preference number: 4 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVFWSVI*DGVDHM
Trigger: CATATGGTCGACCCCATCCCATATGACACTCCAAAA...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CCA 90 bp TCATTATGTTTCAGGCATATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATTGCTCTGCACATCCTTaGGACACTGCTTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: SLCFRHIPSPPYSFQHAYCSAHP*DTASCI
Trigger: GATGCAGGAAGCAGTGTCCCAAGGATGTGCAGAGCA...ATAAGCATGCTGAAAGGAATATGGGGGACTGGGAATATGCCTGAAACATAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATCACAAACTGGTTGTGTaGTGGAGAAGGAAAGAACAT +
Preference number: 4 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHHKLVV*WRRKEH
Trigger: ATGTTCTTTCCTTCTCCACCACACAACCAGTTTGTG...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 72 bp GAGAGAATGTGTCAGTTCCTTCCGACTTCTGATGTGTaGCTATACAGCATCCCTTTGCAGTTGTACTGTCCT +
Preference number: 4 (lower is better)
Translates to: ERMCQFLPTSDV*LYSIPLQLYCP
Trigger: AGGACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACATTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGATGGTAACTTTGCCTTaGGAAGGAATCCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGEMVTLP*EGIPCA
Trigger: GGCACATGGGATTCCTTCTCAAGGCAAAGTTACCAT...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp GAATGTTCTCTTTGTGGTTTGGGCATGAAGCTGTTTAGAGGACTTGGGAGAGAATTTGTCAGGAGGGACTaGACATTGTCAAAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ECSLCGLGMKLFRGLGREFVRRD*TLSKSS
Trigger: AGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAA...TTCTCTCCCAAGTCCTCTAAACAGCTTCATGCCCAAACCACAAAGAGAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp GTTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTTGAAAGCTGACTGTACAGTGCACCGTATATCCTaGATCCCTTCACTGTTACCT +
Preference number: 4 (lower is better)
Translates to: VWKVKYNWRVGRLKADCTVHRIS*IPSLLP
Trigger: AGGTAACAGTGAAGGGATTCAGGATATACGGTGCAC...TGTACAGTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGTGTAACCGTCGGTCATaGTGCCATAACCTTCATGGA +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGECNRRS*CHNLHG
Trigger: TCCATGAAGGTTATGGCATCATGACCGACGGTTACA...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp AGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTTGTTCCTTCCGACTTCTaGTGTGTTGCTATACAGCAT +
Preference number: 4 (lower is better)
Translates to: RKLGCPLANTNNLQWHGLVPSDF*CVAIQH
Trigger: ATGCTGTATAGCAACACATCAGAAGTCGGAAGGAAC...AAGGCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCCCCATGGCTGAAATGTaGACTCTGAATAATTCTATG +
Preference number: 4 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVPMAEM*TLNNSM
Trigger: CATAGAATTATTCAGAGTTCACATTTCAGCCATGGG...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTAGAACTCAAATCAGATaGACTTCAGTAACTCTTGTC +
Preference number: 4 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTRTQIR*TSVTLV
Trigger: GACAAGAGTTACTGAAGTTCATCTGATTTGAGTTCT...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TCATTATGTTTCAGGCATATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATTGTTGTCTGCTGCTGTaGGGGATCTTCATGCAAGCA +
Preference number: 4 (lower is better)
Translates to: SLCFRHIPSPPYSFQHAYCCLLL*GIFMQA
Trigger: TGCTTGCATGAAGATCCCTCACAGCAGCAGACAACA...ATAAGCATGCTGAAAGGAATATGGGGGACTGGGAATATGCCTGAAACATAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCTATACAGCATCCCTTTaGAGTTGTACTGTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVYTASL*SCTVLD
Trigger: GTCAAGGACAGTACAACTGCAAAGGGATGCTGTATA...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR GCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCAGTGCCTTGGAGATaGTCACAGGGTTTACTTCAT +
Preference number: 4 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPSVPWR*SQGLLH
Trigger: ATGAAGTAAACCCTGTGAGCATCTCCAAGGCACTGA...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATCACTTGCCTCATATATaGCTAACGTTTACCACAGTC +
Preference number: 4 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNHLPHI*LTFTTV
Trigger: GACTGTGGTAAACGTTAGGCATATATGAGGCAAGTG...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp GAATGTTCTCTTTGTGGTTTGGGCATGAAGCTGTTTAGAGGACTTGGGAGAGAACCAAATGTTGGGCATTaGACTTGCCTCATATATGCC +
Preference number: 4 (lower is better)
Translates to: ECSLCGLGMKLFRGLGREPNVGH*TCLIYA
Trigger: GGCATATATGAGGCAAGTGCAATGCCCAACATTTGG...TTCTCTCCCAAGTCCTCTAAACAGCTTCATGCCCAAACCACAAAGAGAACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCTGGTCTTGTTTATATTaGTTTCTAGGGGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TVTALIASKYPDLALLEFWSCLY*FLGAGS
Trigger: AGACCCAGCCCCTAGAAAGCAATATAAACAAGACCA...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAAAGATGGAAGCAGGCATaGTGCGTTTCAGCCAACCTC +
Preference number: 4 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKRWKQA*CVSANL
Trigger: GAGGTTGGCTGAAACGCACCATGCCTGCTTCCATCT...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp AGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTTTTACAGAGCAAAAGATaGAAGCAGGCATGGTGCGTT +
Preference number: 4 (lower is better)
Translates to: RKLGCPLANTNNLQWHGLLQSKR*KQAWCV
Trigger: AACGCACCATGCCTGCTTCCATCTTTTGCTCTGTAA...AAGGCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTTACAGAGCAAAAGATaGAAGCAGGCATGGTGCGTT +
Preference number: 4 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPLQSKR*KQAWCV
Trigger: AACGCACCATGCCTGCTTCCATCTTTTGCTCTGTAA...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGTGTACATGTGGAGGCTaGAATCTGCTCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGECTCGG*NLLWLM
Trigger: CATCAACCAGAGCAGATTCCAGCCTCCACATGTACA...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CCA 90 bp TGTCAGGAGGGACTGAACATTGTCAAAGTCCTCTGGTTTCAATTTGGACACAGAGAGTGTCATATGGGATaGGGTCGACCATATGTACAT +
Preference number: 4 (lower is better)
Translates to: CQEGLNIVKVLWFQFGHRECHMG*GRPYVH
Trigger: ATGTACATATGGTCGACCCCATCCCATATGACACTC...TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAATGTTCAGTCCCTCCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCCTCTGGTTTCAATTTaGACACAGAGGGGAAACGGT +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGPLVSI*TQRGNG
Trigger: ACCGTTTCCCCTCTGTGTCCAAATTGAAACCAGAGG...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCACAGGGTTTACTTCATaGATTCCACCAAACACATGG +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTTGFTS*IPPNTW
Trigger: CCATGTGTTTGGTGGAATCCATGAAGTAAACCCTGT...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATAACACAGTCGCCAGATaGGCTTTTCCAACATATCAA +
Preference number: 4 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNNTVAR*AFPTYQ
Trigger: TTGATATGTTGGAAAAGCCCATCTGGCGACTGTGTT...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 72 bp CCACAGTCCCGCAAAGTAAGCAATACAATCCATGGCTaGCAGATCAGAAAACAAGGCCACATAGTTAGTAGT +
Preference number: 4 (lower is better)
Translates to: PQSRKVSNTIHG*QIRKQGHIVSS
Trigger: ACTACTAACTATGTGGCCTTGTTTTCTGATCTGCAAGCCATGGATTGTATTGCTTACTTTGCGGGACTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 72 bp CCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTaGCTACCTTCTTATACAAAAAGCTCTGTACCTGCT +
Preference number: 4 (lower is better)
Translates to: PYLLCSLAILAF*LPSYTKSSVPA
Trigger: AGCAGGTACAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 72 bp GTTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTaGAAAGCTGACTGTACACGTCGAGGCATTGATGTA +
Preference number: 4 (lower is better)
Translates to: VWKVKYNWRVGR*KADCTRRGIDV
Trigger: TACATCAATGCCTCGACGTGTACAGTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCATGGGAAAAAGGCCTTaGAGGCATTTCAGAGATTTT +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTMGKRP*RHFRDF
Trigger: AAAATCTCTGAAATGCCTTCAAGGCCTTTTTCCCAT...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGGCTATATTCTCTGCCTaGACACTTTTGTCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALAIFSA*TLLSQV
Trigger: GACCTGGGACAAAAGTGTTCAGGCAGAGAATATAGC...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCCACCAGACCACAAACTaGCAAGAATTTGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: TVTALIASKYPDLALLEFHQTTN*QEFVTK
Trigger: TTTTGTGACAAATTCTTGTCAGTTTGTGGTCTGGTG...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TTAAACCACGGGGTCCAAGGTGCACCGTATATCCTGAATCCCTTCACTGTTACCCTGTTTAACAAGGTCTaGCATGAATTCCTTATCAAA +
Preference number: 4 (lower is better)
Translates to: LNHGVQGAPYILNPFTVTLFNKV*HEFLIK
Trigger: TTTGATAAGGAATTCATGGCAGACCTTGTTAAACAG...GGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGGACCCCGTGGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR GCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGTGTGCTAGCGAAGATTaGATCGACACACAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGECASED*IDTQCK
Trigger: TTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACA...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR GCA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCTTTGAGGTTCTGTGGTaGATGATTCCATCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVFEVLW*MIPSSF
Trigger: AAAAGAAGATGGAATCATGCACCACAGAACCTCAAA...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CAGGGATTCCTTTATGGCAGCAAAAACAGACTAACACATGACTGTTTTCCCAGCATACAATCCATGGCTTaGAGATCAGAAAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: QGFLYGSKNRLTHDCFPSIQSMA*RSENKA
Trigger: GGCCTTGTTTTCTGATCTGCAAGCCATGGATTGTAT...GCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TATCAGAAAGTTTCTCTGTTGTCACCCTCCTTAATGTCACTCACCCACTCCACCAAAAAGCTCTGTACCTaGTATATTCTCTGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: YQKVSLLSPSLMSLTHSTKKLCT*YILCLN
Trigger: GTTCAGGCAGAGAATATAGCAGGTACAGAGCTTTTT...GGTGGAGTGGGTGAGTGACATTAAGGAGGGTGACAACAGAGAAACTTTCTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTGTGAGGGATCTTCATaGAAGCACACTGTTACTGAA +
Preference number: 4 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPCEGSS*KHTVTE
Trigger: TTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACA...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCGAGTGTCATATGGGATaGGGTCGACCATATGTACAT +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGECHMG*GRPYVH
Trigger: ATGTACATATGGTCGACCCCATCCCATATGACACTC...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGGCTTCAGGAACCCTGTaGGTTTGGAAGGTCAAATAT +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGEASGTL*VWKVKY
Trigger: ATATTTGACCTTCCAAACCCACAGGGTTCCTGAAGC...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CCA 90 bp AGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTTAGCTTGGCTGTCCTTTaGCGAACACTAACAATTTAC +
Preference number: 4 (lower is better)
Translates to: RKLGCPLANTNNLQWHGLSLAVL*RTLTIY
Trigger: GTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCT...AAGGCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGGCATCTGCCAAATGTTaGGCATTGCACTTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALASAKC*ALHLPH
Trigger: ATGAGGCAAGTGCAATGCCCAACATTTGGCAGATGC...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGCATGCCTACTTCTGTTaGGAAGATTGCTATAAATTG +
Preference number: 4 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQHAYFC*EDCYKL
Trigger: CAATTTATAGCAATCTTCTCAACAGAAGTAGGCATG...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp TCATTATGTTTCAGGCATATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATTTTCTCAATAGAAGATaGGTTGTAGAGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLCFRHIPSPPYSFQHAYFLNRR*VVEGPG
Trigger: TCCTGGCCCCTCTACAACTCATCTTCTATTGAGAAA...ATAAGCATGCTGAAAGGAATATGGGGGACTGGGAATATGCCTGAAACATAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCATTGCTAATTCCATATaGTTTCCACCAGACCACAAA +
Preference number: 4 (lower is better)
Translates to: TVTALIASKYPDLALLEFIANSI*FPPDHK
Trigger: TTTGTGGTCTGGTGGAAAGCATATGGAATTAGCAAT...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGAAGGTCAAATATAATTaGAGGGTTGGTCGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQKVKYN*RVGRLK
Trigger: TTTCAACCGACCAACCCTCCAATTATATTTGACCTT...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCGGAACCCTGTGGGTTTaGAAGGTCAAATATAATTGG +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGGTLWV*KVKYNW
Trigger: CCAATTATATTTGACCTTCCAAACCCACAGGGTTCC...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp CCTTCACTGTTACCTCCGAATCTTGTAAGTAAATACTGTTTGTCAGGAGGGACTAGCTTGGCTGTCCTTTaGCGAACACTAACAATTTAC +
Preference number: 4 (lower is better)
Translates to: PSLLPPNLVSKYCLSGGTSLAVL*RTLTIY
Trigger: GTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCT...AGTCCCTCCTGACAAACAGTATTTACTTACAAGATTCGGAGGTAACAGTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp TCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTTGTACTGTCTGTGCAAATCTGTGTTaGTTTTTAAAACACTGCCTG +
Preference number: 4 (lower is better)
Translates to: SFRLLMCCYTASLCSCTVCANLC*FLKHCL
Trigger: CAGGCAGTGTTTTAAAAACCAACACAGATTTGCACA...GACAGTACAACTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358117.10
3UTR CAA 72 bp TGGTCCCTAGAACACTCAACGTTAATGAATTTCATTTaGGGAGAAATATGTGGGAGCTTGGTAAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: WSLEHSTLMNFI*GEICGSLVSMP
Trigger: TGGCATGCTTACCAAGCTCCCACATATTTCTCCCAAAATGAAATTCATTAACGTTGAGTGTTCTAGGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 72 bp TCACTGTTACCTCCGAATCTTGTAAGTAAATACTGTTaGTCAGGAGGGACTGAACATTGTCAAAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLLPPNLVSKYC*SGGTEHCQSPL
Trigger: CAGAGGACTTTGACAATGTTCAGTCCCTCCTGACAAACAGTATTTACTTACAAGATTCGGAGGTAACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR TCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGCAATGGCATGGCCTTTaGGAAAACAGAAGTCATTTT +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGEQWHGL*ENRSHF
Trigger: AAAATGACTTCTGTTTTCTCAAAGGCCATGCCATTG...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAAGTGGCGACGCTCCATTaGAATATGGAATTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKVATLH*NMELSS
Trigger: TGAAGACAATTCCATATTTCAATGGAGCGTCGCCAC...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp AGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTTATTGTCAAAGTCCTCTaGTTTCAATTTGGACACAGA +
Preference number: 4 (lower is better)
Translates to: RKLGCPLANTNNLQWHGLIVKVL*FQFGHR
Trigger: TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAAT...AAGGCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CCA 90 bp CAGGGATTCCTTTATGGCAGCAAAAACAGACTAACACATGACTGTTTTCCCAGCATTGTCAAAGTCCTCTaGTTTCAATTTGGACACAGA +
Preference number: 4 (lower is better)
Translates to: QGFLYGSKNRLTHDCFPSIVKVL*FQFGHR
Trigger: TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAAT...GCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR TCA 90 bp CACTTTTTAAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGTGCACCGTATATCCTaGATCCCTTCACTGTTACCT +
Preference number: 4 (lower is better)
Translates to: HFLKESLAVLWRTLTIYNVHRIS*IPSLLP
Trigger: AGGTAACAGTGAAGGGATTCAGGATATACGGTGCAC...ATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTTAAAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR TCA 90 bp CACTTTTTAAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATTACACGTCGAGGCATTaGTGTACGTTGTGTAACCGT +
Preference number: 4 (lower is better)
Translates to: HFLKESLAVLWRTLTIYNYTSRH*CTLCNR
Trigger: ACGGTTACACAACGTACATCAATGCCTCGACGTGTA...ATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTTAAAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR GCA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGAAGAAGTCTTTTCCATaGCTACTTCTGTTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TIFCASEDCIDTQCKMGEKKSFP*LLLLRR
Trigger: TCTTCTCAACAGAAGTAGGCATGGAAAAGACTTCTT...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CCA 90 bp GTTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTTGAAAGCTGACTGTACAATTGTCAAAGTCCTCTaGTTTCAATTTGGACACAGA +
Preference number: 4 (lower is better)
Translates to: VWKVKYNWRVGRLKADCTIVKVL*FQFGHR
Trigger: TCTGTGTCCAAATTGAAACCAGAGGACTTTGACAAT...TGTACAGTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAAGGAAAATTCACAAACTaGTTGTGTGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKGKFTN*LCGGEG
Trigger: TCCTTCTCCACCACACAACCAGTTTGTGAATTTTCC...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448418.6
3UTR CAA 72 bp TTAATGAATTTCATTTTGGGAGAAATATGTGGGAGCTaGGTAAGCATGCCAGCTTCTTTGAGGTTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LMNFILGEICGS*VSMPASLRFCG
Trigger: ACCACAGAACCTCAAAGAAGCTGGCATGCTTACCAAGCTCCCACATATTTCTCCCAAAATGAAATTCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTGTTTAACAAGGTCTaGCATGAATTCCTTATCAAA +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGLFNKV*HEFLIK
Trigger: TTTGATAAGGAATTCATGGCAGACCTTGTTAAACAG...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR GCA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCCATTTTCTTCTCAATaGAGCTTTCTTTATAGTGAG +
Preference number: 4 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGPFSSQ*SFLYSE
Trigger: CTCACTATAAAGAAAGCTGCATTGAGAAGAAAATGG...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR GCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAAAGTTTTCCTAAAATCTaGAAGCAGATGCTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKSFPKI*KQMLCA
Trigger: AGCACACAGCATCTGCTTGCAGATTTTAGGAAAACT...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CACTTTTTAAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATTCTTTGAAGCTCCTTTaGAACCCAGTCTCGAAAACC +
Preference number: 4 (lower is better)
Translates to: HFLKESLAVLWRTLTIYNSLKLL*NPVSKT
Trigger: GGTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGA...ATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTTAAAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR GCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAACTTGTCCTGAACACATaGTTTTTCTGGTCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKLVLNT*FFWSCL
Trigger: TAAACAAGACCAGAAAAAGCATGTGTTCAGGACAAG...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAAGCTTCAGTTTCCTATTaGCTTGGCTTTCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKASVSY*LGFPNF
Trigger: AAAATTTGGAAAGCCAAGCCAATAGGAAACTGAAGC...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR GCA 90 bp CAGAGCATAAAAGTTTGGAAAATTCACAAACTGGTTGTGTGGTGGAGAAGGAAACTGTTTAACAAGGTCTaGCATGAATTCCTTATCAAA +
Preference number: 4 (lower is better)
Translates to: QSIKVWKIHKLVVWWRRKLFNKV*HEFLIK
Trigger: TTTGATAAGGAATTCATGGCAGACCTTGTTAAACAG...TTTCCTTCTCCACCACACAACCAGTTTGTGAATTTTCCAAACTTTTATGCTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS GCA 90 bp ACCGCTGTGCATTTCTTTCCCGGGCTGCGCTCCGGATCCCGGGGATaGCTTCAGCGCCCGGCGAGCAGGCGATCCATAGCCGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: TAVHFFPGLRSGSRG*LQRPASRRSIAERP
Trigger: GGGCCGCTCGGCTATGGATCGCCTGCTCGCCGGGCGCTGAAGGCATCCCCGGGATCCGGAGCGCAGCCCGGGAAAGAAATGCACAGCGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000448418.6
CDS CCA 90 bp ACCGTTCCAGGACGCAGGGCTCACCGCAGGGGTAAGGGGAGCGGCTaGGACACTTCGCTCAGACCTAGGAAGGCGACCCTAGGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: TVPGRRAHRRGKGSG*DTSLRPRKATLGSL
Trigger: GAGGGAACCTAGGGTCGCCTTCCTAGGTCTGAGCGAAGTGTCCCAGCCGCTCCCCTTACCCCTGCGGTGAGCCCTGCGTCCTGGAACGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528686.2
CDS-3UTR CAA 90 bp GGCCCCACCTCCCCAGTCTGTTTCCTCTTCCAGCAGAGCCCTCCTCCGCAGTCTGGTGGCGACGCTCCATaGAAATATGGAATTGTCTTC +
Preference number: 5 (lower is better)
Translates to: GPTSPVCFLFQQSPPPQSGGDAP*KYGIVF
Trigger: GAAGACAATTCCATATTTCAATGGAGCGTCGCCACC...AGACTGCGGAGGAGGGCTCTGCTGGAAGAGGAAACAGACTGGGGAGGTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp GGAGCAGGAGGGACTGTTGGTAGGGGATGCCGAGGCTTAGAGAAGGAATCAGCTTGTGGCCCGCTGGTTTaGGAGTGTCATATGGGATGG +
Preference number: 5 (lower is better)
Translates to: GAGGTVGRGCRGLEKESACGPLV*ECHMGW
Trigger: CCATCCCATATGACACTCCAAAACCAGCGGGCCACA...AGCTGATTCCTTCTCTAAGCCTCGGCATCCCCTACCAACAGTCCCTCCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCGGGACTTGGGATGCTTaGGGAAGGGCCTGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVGTWDA*GRAWCG
Trigger: CCCGCACCAGGCCCTTCCCAAAGCATCCCAAGTCCC...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS CCA 90 bp CCATCTGTTCTGGAGTGTGTGTCTGAGATGCAGACAAACCGCGTGTaGCCCGCTGGTTTTGGAGTGTCATATGGGATGGGGTCGACCATA +
Preference number: 5 (lower is better)
Translates to: PSVLECVSEMQTNRV*PAGFGVSYGMGSTI
Trigger: TATGGTCGACCCCATCCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAGACACACACTCCAGAACAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358117.10
ENST00000448418.6
ENST00000526437.5
ENST00000528686.2
CDS-3UTR CAA 90 bp GTTGTCCACCAGGTGAGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTTGTCTTCACACAGCCCACTCTTaGAAGCTCCTTTGGAACCCA +
Preference number: 5 (lower is better)
Translates to: VVHQVSFPVASSSCLLCLHTAHS*KLLWNP
Trigger: TGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTGTG...AAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp GAATGTTCTCTTTGTGGTTTGGGCATGAAGCTGTTTAGAGGACTTGGGAGAGAATGCACAGTGCCTGCCTaGGCTCCCGGAGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: ECSLCGLGMKLFRGLGRECTVPA*APGGKG
Trigger: CCCCTTCCCTCCGGGAGCCAAGGCAGGCACTGTGCA...TTCTCTCCCAAGTCCTCTAAACAGCTTCATGCCCAAACCACAAAGAGAACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp ACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAACTGCATTTACCTGAACTaGTCTCCAGCACTGCGGACA +
Preference number: 5 (lower is better)
Translates to: TFMDSTKHMELGPDSPLNCIYLN*SPALRT
Trigger: TGTCCGCAGTGCTGGAGACAAGTTCAGGTAAATGCA...GTTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CAA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCGCTGACCACACGGGGTaGGAGAGACACCATCCCATG +
Preference number: 5 (lower is better)
Translates to: TVTALIASKYPDLALLEFADHTG*ERHHPM
Trigger: CATGGGATGGTGTCTCTCCAACCCCGTGTGGTCAGC...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp CTGAACCTGGGAGCATCTAACTGCACAGCGTGCACGCATATAAGCACAGCTGGACTGCTTGTCCTGCCCTaGAATTCATTCACAACAGTC +
Preference number: 5 (lower is better)
Translates to: LNLGASNCTACTHISTAGLLVLP*NSFTTV
Trigger: GACTGTTGTGAATGAATTCAAGGGCAGGACAAGCAG...TCCAGCTGTGCTTATATGCGTGCACGCTGTGCAGTTAGATGCTCCCAGGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp CCTAGAGGAGGTCCATGTGTCATGAGTATGTCAATGCCCTCAGGGATGAGGTTCCTCTTTGAAGCTCCTTaGGAACCCAGTCTCGAAAAC +
Preference number: 5 (lower is better)
Translates to: PRGGPCVMSMSMPSGMRFLFEAP*EPSLEN
Trigger: GTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGAG...GAACCTCATCCCTGAGGGCATTGACATACTCATGACACATGGACCTCCTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CAA 90 bp TCATTATGTTTCAGGCATATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATGAGCAGGAGGGACTGTaGGTAGGGGATGCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: SLCFRHIPSPPYSFQHAYEQEGL*VGDAEA
Trigger: AGCCTCGGCATCCCCTACCAACAGTCCCTCCTGCTC...ATAAGCATGCTGAAAGGAATATGGGGGACTGGGAATATGCCTGAAACATAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp GTTGTCCACCAGGTGAGCTTCCCTGTCGCCTCCTCCTCATGCCTTCTTTGTCTTCACCAGGTGTTAGGCTaGCAGAACTGTGATTTAAAT +
Preference number: 5 (lower is better)
Translates to: VVHQVSFPVASSSCLLCLHQVLG*QNCDLN
Trigger: ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTG...AAGACAAAGAAGGCATGAGGAGGAGGCGACAGGGAAGCTCACCTGGTGGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATCTGCTCTGCACATCCTaGGGACACTGCTTCCTGCAT +
Preference number: 5 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNLLCTS*GHCFLH
Trigger: ATGCAGGAAGCAGTGTCCCAAGGATGTGCAGAGCAG...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTTATGGTAACTTTGCCTaGAGAAGGAATCCCATGTGC +
Preference number: 5 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTYGNFA*RRNPMC
Trigger: GCACATGGGATTCCTTCTCAAGGCAAAGTTACCATA...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCTGTGGCCCGCTGGTTTaGGAGTGTCATATGGGATGG +
Preference number: 5 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGCGPLV*ECHMGW
Trigger: CCATCCCATATGACACTCCAAAACCAGCGGGCCACA...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CAA 90 bp CTGTGGGTTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTTGAAAGCTGACTCCTCTGGTTTCAATTaGGACACAGAGGGGAAACGG +
Preference number: 5 (lower is better)
Translates to: LWVWKVKYNWRVGRLKADSSGFN*DTEGKR
Trigger: CCGTTTCCCCTCTGTGTCCAAATTGAAACCAGAGGA...GTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAACCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CAA 90 bp AACCTTCATGGATTCCACCAAACACATGGAGCTTGGGCCGGACTCGCCTCTGAAGTAAGTAAATACTGTTaGTCAGGAGGGACTGAACAT +
Preference number: 5 (lower is better)
Translates to: NLHGFHQTHGAWAGLASEVSKYC*SGGTEH
Trigger: ATGTTCAGTCCCTCCTGACAAACAGTATTTACTTAC...TTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CAA 90 bp GTAAGCCTTGGCAGCTTCCACCAGGTGTTAGGCTTGCAGAACTGTGATTTAAATAGCATCTGCCAAATGTaGGGCATTGCACTTGCCTCA +
Preference number: 5 (lower is better)
Translates to: VSLGSFHQVLGLQNCDLNSICQM*GIALAS
Trigger: TGAGGCAAGTGCAATGCCCAACATTTGGCAGATGCT...ATTTAAATCACAGTTCTGCAAGCCTAACACCTGGTGGAAGCTGCCAAGGCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp TCATTATGTTTCAGGCATATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATAATCCAATCATGTCATaGACCACCCCCACCCCCGCC +
Preference number: 5 (lower is better)
Translates to: SLCFRHIPSPPYSFQHAYNPIMS*TTPTPA
Trigger: GGCGGGGGTGGGGGTGGTCAATGACATGATTGGATT...ATAAGCATGCTGAAAGGAATATGGGGGACTGGGAATATGCCTGAAACATAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCCTGGTCTTGTTTATATaGCTTTCTAGGGGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVLVLFI*LSRGWV
Trigger: GACCCAGCCCCTAGAAAGCAATATAAACAAGACCAG...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTTTGTCCAAGATTGCATaGCTAGTTAGAAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTLSKIA*LVRSRA
Trigger: GGCTCTGCTTCTAACTAGCAATGCAATCTTGGACAA...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp GAATGTTCTCTTTGTGGTTTGGGCATGAAGCTGTTTAGAGGACTTGGGAGAGAATCCTCTGGTTTCAATTaGGACACAGAGGGGAAACGG +
Preference number: 5 (lower is better)
Translates to: ECSLCGLGMKLFRGLGRESSGFN*DTEGKR
Trigger: CCGTTTCCCCTCTGTGTCCAAATTGAAACCAGAGGA...TTCTCTCCCAAGTCCTCTAAACAGCTTCATGCCCAAACCACAAAGAGAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGCACACAGCCCACTCTTaGAAGCTCCTTTGGAACCCA +
Preference number: 5 (lower is better)
Translates to: TIFCASEDCIDTQCKMGEHTAHS*KLLWNP
Trigger: TGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTGTG...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CAA 90 bp GTTTGGAAGGTCAAATATAATTGGAGGGTTGGTCGGTTGAAAGCTGACTGTACACACACAGCCCACTCTTaGAAGCTCCTTTGGAACCCA +
Preference number: 5 (lower is better)
Translates to: VWKVKYNWRVGRLKADCTHTAHS*KLLWNP
Trigger: TGGGTTCCAAAGGAGCTTCAAAGAGTGGGCTGTGTG...TGTACAGTCAGCTTTCAACCGACCAACCCTCCAATTATATTTGACCTTCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CAA 90 bp CCTTCACTGTTACCTCCGAATCTTGTAAGTAAATACTGTTTGTCAGGAGGGACTTGGAGGGTTGGTCGGTaGAAAGCTGACTGTACACGT +
Preference number: 5 (lower is better)
Translates to: PSLLPPNLVSKYCLSGGTWRVGR*KADCTR
Trigger: ACGTGTACAGTCAGCTTTCAACCGACCAACCCTCCA...AGTCCCTCCTGACAAACAGTATTTACTTACAAGATTCGGAGGTAACAGTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CAA 90 bp TTAAACCACGGGGTCCAAGGTGCACCGTATATCCTGAATCCCTTCACTGTTACCAAGCTTGGCTGTCCTTaGGCGAACACTAACAATTTA +
Preference number: 5 (lower is better)
Translates to: LNHGVQGAPYILNPFTVTKLGCP*ANTNNL
Trigger: TAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTT...GGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGGACCCCGTGGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CAA 90 bp CGCTCCATTGAAATATGGAATTGTCTTCAGGCTGGAGGCACCTGCTGTGTCACTTGTTCTCTTTGTGGTTaGGGCATGAAGCTGTTTAGA +
Preference number: 5 (lower is better)
Translates to: RSIEIWNCLQAGGTCCVTCSLCG*GMKLFR
Trigger: TCTAAACAGCTTCATGCCCAAACCACAAAGAGAACA...AGTGACACAGCAGGTGCCTCCAGCCTGAAGACAATTCCATATTTCAATGGAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGGAGGGGGCATTTGTGTaGTCTGCTGCTGTGAGGGAT +
Preference number: 5 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALEGAFV*SAAVRD
Trigger: ATCCCTCACAGCAGCAGACAACACAAATGCCCCCTC...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGTATGGTAACTTTGCCTaGAGAAGGAATCCCATGTGC +
Preference number: 5 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQYGNFA*RRNPMC
Trigger: GCACATGGGATTCCTTCTCAAGGCAAAGTTACCATA...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CAA 90 bp ACAATATTTTGTGCTAGCGAAGATTGCATCGACACACAGTGCAAAATGGGAGAGTCCTCTGGTTTCAATTaGGACACAGAGGGGAAACGG +
Preference number: 5 (lower is better)
Translates to: TIFCASEDCIDTQCKMGESSGFN*DTEGKR
Trigger: CCGTTTCCCCTCTGTGTCCAAATTGAAACCAGAGGA...CTCTCCCATTTTGCACTGTGTGTCGATGCAATCTTCGCTAGCACAAAATATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CAA 90 bp TATCTTTCTCCTTACCTCCTCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTCCAGCAAAGCCCCATTaGCAACAGAAATTTCCATGG +
Preference number: 5 (lower is better)
Translates to: YLSPYLLCSLAILAFLLPPAKPH*QQKFPW
Trigger: CCATGGAAATTTCTGTTGCAAATGGGGCTTTGCTGG...AGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGAGGAGGTAAGGAGAAAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCAATACAATCCATGGCTaGCAGATCAGAAAACAAGGC +
Preference number: 5 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVNTIHG*QIRKQG
Trigger: GCCTTGTTTTCTGATCTGCAAGCCATGGATTGTATT...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTCTTTGAAGCTCCTTaGGAACCCAGTCTCGAAAAC +
Preference number: 5 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGLFEAP*EPSLEN
Trigger: GTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGAG...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CAA 90 bp AAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCCGACTTCTGATGTGTaGCTATACAGCATCCCTTTG +
Preference number: 5 (lower is better)
Translates to: KRKLGCPLANTNNLQWHGPTSDV*LYSIPL
Trigger: CAAAGGGATGCTGTATAGCAACACATCAGAAGTCGG...GCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CAA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGTTTGTCCTCAGTGCCTaGGAGATGCTCACAGGGTTT +
Preference number: 5 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALFVLSA*EMLTGF
Trigger: AAACCCTGTGAGCATCTCCAAGGCACTGAGGACAAA...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp TTGTCTGCTGCTGTGAGGGATCTTCATGCAAGCACACTGTTACTGAACACAGTCGCAGATGCTGTGTGCTaGTCAGAATCTTTGAAAATT +
Preference number: 5 (lower is better)
Translates to: LSAAVRDLHASTLLLNTVADAVC*SESLKI
Trigger: AATTTTCAAAGATTCTGACAAGCACACAGCATCTGC...GACTGTGTTCAGTAACAGTGTGCTTGCATGAAGATCCCTCACAGCAGCAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp CAGTTTCCTATTGGCTTGGCTTTCCAAATTTTCATGATGGGTGGGAGGGGGCATAATGGGAAAAAGGCCTaGAAGGCATTTCAGAGATTT +
Preference number: 5 (lower is better)
Translates to: QFPIGLAFQIFMMGGRGHNGKKA*KAFQRF
Trigger: AAATCTCTGAAATGCCTTCAAGGCCTTTTTCCCATT...ATGCCCCCTCCCACCCATCATGAAAATTTGGAAAGCCAAGCCAATAGGAAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGGTAAGTAAATACTGTTaGTCAGGAGGGACTGAACAT +
Preference number: 5 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQVSKYC*SGGTEH
Trigger: ATGTTCAGTCCCTCCTGACAAACAGTATTTACTTAC...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CAA 90 bp TCATTATGTTTCAGGCATATTCCCAGTCCCCCATATTCCTTTCAGCATGCTTATCTCTTTGAAGCTCCTTaGGAACCCAGTCTCGAAAAC +
Preference number: 5 (lower is better)
Translates to: SLCFRHIPSPPYSFQHAYLFEAP*EPSLEN
Trigger: GTTTTCGAGACTGGGTTCCAAAGGAGCTTCAAAGAG...ATAAGCATGCTGAAAGGAATATGGGGGACTGGGAATATGCCTGAAACATAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp AGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATGGCATGGCCTTAAGCTTGGCTGTCCTTaGGCGAACACTAACAATTTA +
Preference number: 5 (lower is better)
Translates to: RKLGCPLANTNNLQWHGLKLGCP*ANTNNL
Trigger: TAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTT...AAGGCCATGCCATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000526437.5
CDS-3UTR CAA 90 bp CAGGGATTCCTTTATGGCAGCAAAAACAGACTAACACATGACTGTTTTCCCAGCCAGAAAGTTTCTCTGTaGTCACCCTCCTTAATGTCA +
Preference number: 5 (lower is better)
Translates to: QGFLYGSKNRLTHDCFPSQKVSL*SPSLMS
Trigger: TGACATTAAGGAGGGTGACAACAGAGAAACTTTCTG...GCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS GCA 90 bp ACTGCTACCTTCTCCTCTGAAACTCATGCATTAGGGTTTCTTCCATaGTTGCAATGGGAAACCAGGTCTAACCAGTCATTAAACTTCTTA +
Preference number: 5 (lower is better)
Translates to: TATFSSETHALGFLP*LQWETRSNQSLNFL
Trigger: TAAGAAGTTTAATGACTGGTTAGACCTGGTTTCCCATTGCAAGCATGGAAGAAACCCTAATGCATGAGTTTCAGAGGAGAAGGTAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS CCA 90 bp AGGAAGTTTTTGAAGGCAGAGAACATATTTTTGTCCTCAGTGCCTTaGAGATGCTCACAGGGTTTACTTCATGGATTCCACCAAACACAT +
Preference number: 5 (lower is better)
Translates to: RKFLKAENIFLSSVP*RCSQGLLHGFHQTH
Trigger: ATGTGTTTGGTGGAATCCATGAAGTAAACCCTGTGAGCATCTCCAAGGCACTGAGGACAAAAATATGTTCTCTGCCTTCAAAAACTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp CCTCCGAATCTTGTAAGTAAATACTGTTTGTCAGGAGGGACTGAACATTGTCAATATGGTAACTTTGCCTaGAGAAGGAATCCCATGTGC +
Preference number: 5 (lower is better)
Translates to: PPNLVSKYCLSGGTEHCQYGNFA*RRNPMC
Trigger: GCACATGGGATTCCTTCTCAAGGCAAAGTTACCATA...TTGACAATGTTCAGTCCCTCCTGACAAACAGTATTTACTTACAAGATTCGGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS-3UTR CAA 90 bp CACTTTTTAAAAGAAAGCTTGGCTGTCCTTTGGCGAACACTAACAATTTACAATTGGAGGGTTGGTCGGTaGAAAGCTGACTGTACACGT +
Preference number: 5 (lower is better)
Translates to: HFLKESLAVLWRTLTIYNWRVGR*KADCTR
Trigger: ACGTGTACAGTCAGCTTTCAACCGACCAACCCTCCA...ATTGTAAATTGTTAGTGTTCGCCAAAGGACAGCCAAGCTTTCTTTTAAAAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CAA 90 bp ATGTGTCAGTTCCTTCCGACTTCTGATGTGTTGCTATACAGCATCCCTTTGCAGGAAGATTGCTATAAATaGGGACCACATCTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: MCQFLPTSDVLLYSIPLQEDCYK*GPHLQK
Trigger: TTTTTGCAGATGTGGTCCCAATTTATAGCAATCTTC...CTGCAAAGGGATGCTGTATAGCAACACATCAGAAGTCGGAAGGAACTGACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358117.10
CDS-3UTR CAA 90 bp GAATGTTCTCTTTGTGGTTTGGGCATGAAGCTGTTTAGAGGACTTGGGAGAGAATCTGAGGCTGGGAAATaGATAATTAAAAGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: ECSLCGLGMKLFRGLGRESEAGK*IIKREA
Trigger: TGCTTCCCTTTTAATTATCAATTTCCCAGCCTCAGA...TTCTCTCCCAAGTCCTCTAAACAGCTTCATGCCCAAACCACAAAGAGAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp ACAGTGACAGCCCTAATAGCAAGTAAATACCCAGACCTGGCCCTTTTAGAGTTCGCTATACTGGCCTTTTaGCTACCTTCTTATACAAAA +
Preference number: 5 (lower is better)
Translates to: TVTALIASKYPDLALLEFAILAF*LPSYTK
Trigger: TTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGC...GAACTCTAAAAGGGCCAGGTCTGGGTATTTACTTGCTATTAGGGCTGTCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS GCA 90 bp CTAAAAAGCAATGTGGAAAACTGTTTGAATCATCACTTACCAAGGTaGACCGTATATCCTGAATCCCTTCACTGTTACCTCCGAATCTTG +
Preference number: 5 (lower is better)
Translates to: LKSNVENCLNHHLPR*TVYPESLHCYLRIL
Trigger: CAAGATTCGGAGGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGGTAAGTGATGATTCAAACAGTTTTCCACATTGCTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524636.1
CDS-3UTR CAA 90 bp CAGGGATTCCTTTATGGCAGCAAAAACAGACTAACACATGACTGTTTTCCCAGCATCAGGTGTCATCTCTaGCTTTTCTCAAATTGTAAG +
Preference number: 5 (lower is better)
Translates to: QGFLYGSKNRLTHDCFPSIRCHL*LFSNCK
Trigger: CTTACAATTTGAGAAAAGCAAGAGATGACACCTGAT...GCTGGGAAAACAGTCATGTGTTAGTCTGTTTTTGCTGCCATAAAGGAATCCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS TCA 90 bp CAATTAATTGTGTCTATGCCAGTTTCCTCTAGACTAGGAAGTTTTTaGAGGCAGAGAACATATTTTTGTCCTCAGTGCCTTGGAGATGCT +
Preference number: 5 (lower is better)
Translates to: QLIVSMPVSSRLGSF*RQRTYFCPQCLGDA
Trigger: AGCATCTCCAAGGCACTGAGGACAAAAATATGTTCTCTGCCTTCAAAAACTTCCTAGTCTAGAGGAAACTGGCATAGACACAATTAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS TCA 90 bp GGAAAACTGTTTGAATCATCACTTACCAAGGTGCACCGTATATCCTaGATCCCTTCACTGTTACCTCCGAATCTTGTAAGTAAATACTGT +
Preference number: 5 (lower is better)
Translates to: GKLFESSLTKVHRIS*IPSLLPPNLVSKYC
Trigger: ACAGTATTTACTTACAAGATTCGGAGGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGGTAAGTGATGATTCAAACAGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524636.1
CDS-3UTR CAA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGGTAAGTAAATACTGTTaGTCAGGAGGGACTGAACAT +
Preference number: 5 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALVSKYC*SGGTEH
Trigger: ATGTTCAGTCCCTCCTGACAAACAGTATTTACTTAC...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS-3UTR CAA 90 bp TCTGTTCTCTGGCTATACTGGCCTTTTTGCTACCTTCTTATACAAAAAGCTCTGAGCTTCAGTTTCCTATaGGCTTGGCTTTCCAAATTT +
Preference number: 5 (lower is better)
Translates to: SVLWLYWPFCYLLIQKALSFSFL*AWLSKF
Trigger: AAATTTGGAAAGCCAAGCCAATAGGAAACTGAAGCT...CAGAGCTTTTTGTATAAGAAGGTAGCAAAAAGGCCAGTATAGCCAGAGAACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS GCA 72 bp CATTTCTTTCCCGGGCTGCGCTCCGGATCCCGGGGATaGCTTCAGCGCCCGGCGAGCAGGCGATCCATAGCC +
Preference number: 6 (lower is better)
Translates to: HFFPGLRSGSRG*LQRPASRRSIA
Trigger: GGCTATGGATCGCCTGCTCGCCGGGCGCTGAAGGCATCCCCGGGATCCGGAGCGCAGCCCGGGAAAGAAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358117.10
ENST00000448418.6
CDS CCA 72 bp GGACGCAGGGCTCACCGCAGGGGTAAGGGGAGCGGCTaGGACACTTCGCTCAGACCTAGGAAGGCGACCCTA +
Preference number: 6 (lower is better)
Translates to: GRRAHRRGKGSG*DTSLRPRKATL
Trigger: TAGGGTCGCCTTCCTAGGTCTGAGCGAAGTGTCCCAGCCGCTCCCCTTACCCCTGCGGTGAGCCCTGCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528686.2
CDS CCA 72 bp CTGGAGTGTGTGTCTGAGATGCAGACAAACCGCGTGTaGCCCGCTGGTTTTGGAGTGTCATATGGGATGGGG +
Preference number: 6 (lower is better)
Translates to: LECVSEMQTNRV*PAGFGVSYGMG
Trigger: CCCCATCCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAGACACACACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358117.10
ENST00000448418.6
ENST00000526437.5
ENST00000528686.2
CDS CCA 72 bp AAACCGCGTGTGGCCCGCTGGTTTTGGAGTGTCATATaGGATGGGGTCGACCATATGTACATGTGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: KPRVARWFWSVI*DGVDHMYMWRL
Trigger: CAGCCTCCACATGTACATATGGTCGACCCCATCCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358117.10
ENST00000448418.6
ENST00000526437.5
ENST00000528686.2
CDS GCA 72 bp TCTGGATACCATCTGTTCTGGAGTGTGTGTCTGAGATaGAGACAAACCGCGTGTGGCCCGCTGGTTTTGGAG +
Preference number: 6 (lower is better)
Translates to: SGYHLFWSVCLR*RQTACGPLVLE
Trigger: CTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAGACACACACTCCAGAACAGATGGTATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358117.10
ENST00000448418.6
ENST00000526437.5
ENST00000528686.2
CDS CAA 72 bp CTGAGATGCAGACAAACCGCGTGTGGCCCGCTGGTTTaGGAGTGTCATATGGGATGGGGTCGACCATATGTA +
Preference number: 6 (lower is better)
Translates to: LRCRQTACGPLV*ECHMGWGRPYV
Trigger: TACATATGGTCGACCCCATCCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358117.10
ENST00000448418.6
ENST00000526437.5
ENST00000528686.2
CDS CAA 90 bp AGTGTGTGTCTGAGATGCAGACAAACCGCGTGTGGCCCGCTGGTTTaGGAGTGTCATATGGGATGGGGTCGACCATATGTACATGTGGAG +
Preference number: 6 (lower is better)
Translates to: SVCLRCRQTACGPLV*ECHMGWGRPYVHVE
Trigger: CTCCACATGTACATATGGTCGACCCCATCCCATATGACACTCCAAAACCAGCGGGCCACACGCGGTTTGTCTGCATCTCAGACACACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358117.10
ENST00000448418.6
ENST00000526437.5
ENST00000528686.2
CDS GCA 72 bp GGTGGGAGGGGACATTTTCAGGTGTCTGCGAATGACTaGAGATTAATTTCACTGACTGACAGGCTGCGGTGG +
Preference number: 6 (lower is better)
Translates to: GGRGHFQVSAND*RLISLTDRLRW
Trigger: CCACCGCAGCCTGTCAGTCAGTGAAATTAATCTGCAGTCATTCGCAGACACCTGAAAATGTCCCCTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525519.1
CDS CCA 72 bp GGTTTACTTCATGGATTCCACCAAACACATGGAGCTTaGGCCGGACTCGCCTCTGAACCGTGTTTAACAGCT +
Preference number: 6 (lower is better)
Translates to: GLLHGFHQTHGA*AGLASEPCLTA
Trigger: AGCTGTTAAACACGGTTCAGAGGCGAGTCCGGCCCAAGCTCCATGTGTTTGGTGGAATCCATGAAGTAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS TCA 72 bp GAGCTGTACTCATCCACCGTTATGGTAACTTTGCCTTaGGAAGGAATCCCATGTGCCATCCTTCCTCCCTAT +
Preference number: 6 (lower is better)
Translates to: ELYSSTVMVTLP*EGIPCAILPPY
Trigger: ATAGGGAGGAAGGATGGCACATGGGATTCCTTCTCAAGGCAAAGTTACCATAACGGTGGATGAGTACAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358117.10
ENST00000448418.6
ENST00000526437.5
ENST00000528686.2
CDS TCA 72 bp AGCTTCACTTGTGGTCACAAGGTGCACCGTATATCCTaGATCCCTTCACTGTTACCTCCGAATCTTGTAAGT +
Preference number: 6 (lower is better)
Translates to: SFTCGHKVHRIS*IPSLLPPNLVS
Trigger: ACTTACAAGATTCGGAGGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGTGACCACAAGTGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525519.1
CDS GCA 72 bp GCAGAGAACATATTTTTGTCCTCAGTGCCTTGGAGATaGTCACAGGGTTTACTTCATGGATTCCACCAAACA +
Preference number: 6 (lower is better)
Translates to: AENIFLSSVPWR*SQGLLHGFHQT
Trigger: TGTTTGGTGGAATCCATGAAGTAAACCCTGTGAGCATCTCCAAGGCACTGAGGACAAAAATATGTTCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448418.6
CDS GCA 72 bp TTAAACCACGGGGTCCAAATAGTTCCCAGGAGTTATTaGTGGAAACACATGCTTTCCAATGCTGCTGAGAAA +
Preference number: 6 (lower is better)
Translates to: LNHGVQIVPRSY*WKHMLSNAAEK
Trigger: TTTCTCAGCAGCATTGGAAAGCATGTGTTTCCAGCAATAACTCCTGGGAACTATTTGGACCCCGTGGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529220.5
CDS GCA 72 bp TTCTCCTCTGAAACTCATGCATTAGGGTTTCTTCCATaGTTGCAATGGGAAACCAGGTCTAACCAGTCATTA +
Preference number: 6 (lower is better)
Translates to: FSSETHALGFLP*LQWETRSNQSL
Trigger: TAATGACTGGTTAGACCTGGTTTCCCATTGCAAGCATGGAAGAAACCCTAATGCATGAGTTTCAGAGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526437.5
CDS TCA 72 bp TTTGAATCATCACTTACCAAGGTGCACCGTATATCCTaGATCCCTTCACTGTTACCTCCGAATCTTGTAAGT +
Preference number: 6 (lower is better)
Translates to: FESSLTKVHRIS*IPSLLPPNLVS
Trigger: ACTTACAAGATTCGGAGGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGGTAAGTGATGATTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524636.1
CDS GCA 72 bp AATGTGGAAAACTGTTTGAATCATCACTTACCAAGGTaGACCGTATATCCTGAATCCCTTCACTGTTACCTC +
Preference number: 6 (lower is better)
Translates to: NVENCLNHHLPR*TVYPESLHCYL
Trigger: GAGGTAACAGTGAAGGGATTCAGGATATACGGTGCACCTTGGTAAGTGATGATTCAAACAGTTTTCCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524636.1