RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPPED1 (Homo sapiens)

Ensembl gene IDs: ENSG00000186732

Ensembl transcript IDs: ENST00000334209.9, ENST00000417669.6, ENST00000443721.2, ENST00000447567.1, ENST00000465861.1, ENST00000480239.1

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCCAAGGTGGGGCTGCTGGAGCCTGGGGCCCGCTCGGTCCCTGTaGCACCCTCCAATTCACAGGGCCGGCTGGTCCTGGGCTTCCTCG +
Preference number: 1 (lower is better)
Translates to: CPRWGCWSLGPARSL*HPPIHRAGWSWASS
Trigger: CGAGGAAGCCCAGGACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAGCAGCCCCACCTTGGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR CCA 90 bp TTCCAAGGCCCTGACCTGCCTGCTAGGCCAGTCCCCGCAGCCAGATaGGTCGTCCAGGCAACTCAGCATGGAAGGAACAGTGGCCGGGCC +
Preference number: 1 (lower is better)
Translates to: FQGPDLPARPVPAAR*VVQATQHGRNSGRA
Trigger: GGCCCGGCCACTGTTCCTTCCATGCTGAGTTGCCTGGACGACCCATCTGGCTGCGGGGACTGGCCTAGCAGGCAGGTCAGGGCCTTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR CCA 90 bp GCGTGCATGTGTGTCGGTGCGTGCCTGGACATGGGTTCACACCCATaGCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGC +
Preference number: 1 (lower is better)
Translates to: ACMCVGACLDMGSHP*QACCSLSLQTLHPG
Trigger: GCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACACACATGCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 90 bp CCTGGCTACAGGAACCCCTTCAGCCAAACGGGATTCCTGGAGCCCTaGACCCCACGGCGCTCAGCTTCAGCCAACCCGATACAGTGCTGC +
Preference number: 1 (lower is better)
Translates to: PGYRNPFSQTGFLEP*TPRRSASANPIQCC
Trigger: GCAGCACTGTATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGTTTGGCTGAAGGGGTTCCTGTAGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 90 bp GTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTaGAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTA +
Preference number: 1 (lower is better)
Translates to: VGACLDMGSHPWQAC*SLSLQTLHPGYRIL
Trigger: TAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 90 bp TGTGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTaGTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATT +
Preference number: 1 (lower is better)
Translates to: CVGACLDMGSHPWQA*CSLSLQTLHPGYRI
Trigger: AATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 90 bp ACTCCAGGTGACAGAAGGCTAAAGAGTCGTTCCAAGGCCCTGACCTaGCTGCTAGGCCAGTCCCCGCAGCCAGATGGGTCGTCCAGGCAA +
Preference number: 1 (lower is better)
Translates to: TPGDRRLKSRSKALT*LLGQSPQPDGSSRQ
Trigger: TTGCCTGGACGACCCATCTGGCTGCGGGGACTGGCCTAGCAGGCAGGTCAGGGCCTTGGAACGACTCTTTAGCCTTCTGTCACCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR TCA 90 bp GAGCACAGAACCCCTGATGGGGATGCGCAGGGTCCCAACTCCAGGTaGCAGAAGGCTAAAGAGTCGTTCCAAGGCCCTGACCTGCCTGCT +
Preference number: 1 (lower is better)
Translates to: EHRTPDGDAQGPNSR*QKAKESFQGPDLPA
Trigger: AGCAGGCAGGTCAGGGCCTTGGAACGACTCTTTAGCCTTCTGTCACCTGGAGTTGGGACCCTGCGCATCCCCATCAGGGGTTCTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 90 bp CCACTTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTaGGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAG +
Preference number: 1 (lower is better)
Translates to: PLGSIKRGACVHVCR*VPGHGFTPMAGLLQ
Trigger: CTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 90 bp TTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTGCGTaGCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAGCCTA +
Preference number: 1 (lower is better)
Translates to: LVQLRGVRACMCVGA*LDMGSHPWQACCSL
Trigger: TAGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR CCA 90 bp ACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCATAAACATCCCTaGCTACAGGAACCCCTTCAGCCAAACGGGATTCCTGGAGCCCTG +
Preference number: 1 (lower is better)
Translates to: TCPAPGASERPHKHP*LQEPLQPNGIPGAL
Trigger: CAGGGCTCCAGGAATCCCGTTTGGCTGAAGGGGTTCCTGTAGCCAGGGATGTTTATGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 90 bp GAGAAACACAGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTaGATGTGTGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGG +
Preference number: 1 (lower is better)
Translates to: EKHRTHLVQLRGVRA*MCVGACLDMGSHPW
Trigger: CCATGGGTGTGAACCCATGTCCAGGCACGCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCTGTGTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 90 bp AGCCCAGCTCAGTGTGGGCAGAAAAGGACTCCCAGGATGCTAGGATaGTGCACCCAGGGTTCAGGACTCCTCAGAGCTCACACCAGTTTT +
Preference number: 1 (lower is better)
Translates to: SPAQCGQKRTPRMLG*CTQGSGLLRAHTSF
Trigger: AAAACTGGTGTGAGCTCTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTCTGCCCACACTGAGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR TCA 90 bp AGTTTATCGTTCTTGGTCCACATAGAAATTGAGTGGAGCTGGCACTaGAAGGGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTG +
Preference number: 1 (lower is better)
Translates to: SLSFLVHIEIEWSWH*KGLLFSTRTHVLRL
Trigger: CAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCCCTTTCAGTGCCAGCTCCACTCAATTTCTATGTGGACCAAGAACGATAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR TCA 90 bp AATGGGACTAAAGTACCTACCTTGAAGGACCATCTGAGGATGAAATaGGTCTATATCTGCAAAAGGGCTCACGGTAGGCTGGTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: NGTKVPTLKDHLRMK*VYICKRAHGRLVPR
Trigger: CCTGGGAACCAGCCTACCGTGAGCCCTTTTGCAGATATAGACTCATTTCATCCTCAGATGGTCCTTCAAGGTAGGTACTTTAGTCCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 90 bp GCTCATTCTGTAGAACCAGCCCCCATCATCCAGGCTCCGAGTGAATaGCTAGGACACTCAGGTCATTGTTCAAGTAAACAAAAATGCCTA +
Preference number: 1 (lower is better)
Translates to: AHSVEPAPIIQAPSE*LGHSGHCSSKQKCL
Trigger: TAGGCATTTTTGTTTACTTGAACAATGACCTGAGTGTCCTAGGCATTCACTCGGAGCCTGGATGATGGGGGCTGGTTCTACAGAATGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp GCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTGGTCACCCATGGCAGGCCTaGTGCAGCCTAAGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: AWGPLGPCATLQFTGPAGHPWQA*CSLSLQ
Trigger: CTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTG...ACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGGTCCCCGCAGCCAGATaGGTCGTCCAGGCAACTCAG +
Preference number: 2 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRVPAAR*VVQATQ
Trigger: CTGAGTTGCCTGGACGACCCATCTGGCTGCGGGGAC...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp TGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAGCCTCCCAACCCAGGGGCATaGCGCCACACAGACCCGTGG +
Preference number: 2 (lower is better)
Translates to: CRCVPGHGFTPMAGLLQPPNPGA*RHTDPW
Trigger: CCACGGGTCTGTGTGGCGGCATGCCCCTGGGTTGGG...AGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp CTGACTGCCTGCCCCTCATCTAGGCCCTACCGGTTCCCACCACCGCCCTGGCCCGTGCGTGCCTGGACATaGGTTCACACCCATGGCAGG +
Preference number: 2 (lower is better)
Translates to: LTACPSSRPYRFPPPPWPVRAWT*VHTHGR
Trigger: CCTGCCATGGGTGTGAACCCATGTCCAGGCACGCAC...GGGCCAGGGCGGTGGTGGGAACCGGTAGGGCCTAGATGAGGGGCAGGCAGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCAGGCCTGTGGAGCTaGCACGGGCGGGCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: WASSAAGMPDRILTVQGKPGLWS*HGRAGQ
Trigger: CTGCCCTGCCCGCCCGTGTCAGCTCCACAGGCCTGG...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp TCCATCCAGGCTACCGCATTCTACAGAGCAGTGTGTTCCCCGTGGGACCAAGGGCCAGGCCTGTGGAGCTaGCACGGGCGGGCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: SIQATAFYRAVCSPWDQGPGLWS*HGRAGQ
Trigger: CTGCCCTGCCCGCCCGTGTCAGCTCCACAGGCCTGG...CCCTTGGTCCCACGGGGAACACACTGCTCTGTAGAATGCGGTAGCCTGGATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp TGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAGCCTCCAGGCAAACAGCTGTaGGCCTGGCCAGGTGCGGTC +
Preference number: 2 (lower is better)
Translates to: CRCVPGHGFTPMAGLLQPPGKQL*AWPGAV
Trigger: GACCGCACCTGGCCAGGCCCACAGCTGTTTGCCTGG...AGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCAGGGGCTGCTGGAGCCTaGGGCCCGCTCGGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSGAAGA*GPLGPC
Trigger: ACAGGGACCGAGCGGGCCCCAGGCTCCAGCAGCCCC...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTACACCCATGGCAGGCCTaGTGCAGCCTAAGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: RAGWSWASSAAGMPDRILHPWQA*CSLSLQ
Trigger: CTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTG...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp GAAAAGGACTCCCAGGATGCTAGGATGCTGCACCCAGGGTTCAGGACTCCTCAGGGGGCTGCTGGAGCCTaGGGCCCGCTCGGTCCCTGT +
Preference number: 2 (lower is better)
Translates to: EKDSQDARMLHPGFRTPQGAAGA*GPLGPC
Trigger: ACAGGGACCGAGCGGGCCCCAGGCTCCAGCAGCCCC...CTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATAAGAAGCTGTCCAAGGTaGGGCTGCTGGAGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: TGFLEPCTPRRSASANPIRSCPR*GCWSLG
Trigger: CCCCAGGCTCCAGCAGCCCCACCTTGGACAGCTTCT...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACCTCGGCTCCTTTTGTaGTGTGAGCCCCCAGGCAAG +
Preference number: 2 (lower is better)
Translates to: TGFLEPCTPRRSASANPIPRLLL*CEPPGK
Trigger: CTTGCCTGGGGGCTCACAGCACAAAAGGAGCCGAGG...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCCCAGGCAAACAGCTGTaGGCCTGGCCAGGTGCGGTC +
Preference number: 2 (lower is better)
Translates to: RPENKGQILPRLLLCCEPPGKQL*AWPGAV
Trigger: GACCGCACCTGGCCAGGCCCACAGCTGTTTGCCTGG...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCGCTCTCACTGGTCCTaGGCACGAATGCCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDRSHWS*ARMPVA
Trigger: AGCCACTGGCATTCGTGCCCAGGACCAGTGAGAGCG...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTATGGGAACGCTCTCACTaGTCCTGGGCACGAATGCCA +
Preference number: 2 (lower is better)
Translates to: RAGWSWASSAAGMPDRILWERSH*SWARMP
Trigger: TGGCATTCGTGCCCAGGACCAGTGAGAGCGTTCCCA...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCAGCTGGTTCCCAGGGCTaGGACCTGGGTGAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSAGSQG*DLGEGV
Trigger: CACTCCCTCACCCAGGTCCCAGCCCTGGGAACCAGC...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp TTCACACCCATGGCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCATCCAGGCTCCGAGTaGATGCCTAGGACACTCAGG +
Preference number: 2 (lower is better)
Translates to: FTPMAGLLQPKPADPPSRHPGSE*MPRTLR
Trigger: CCTGAGTGTCCTAGGCATTCACTCGGAGCCTGGATG...CCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATAATGTGTGTCGGTGCGTaGCTGGACATGGGTTCACAC +
Preference number: 2 (lower is better)
Translates to: TGFLEPCTPRRSASANPIMCVGA*LDMGSH
Trigger: GTGTGAACCCATGTCCAGGCACGCACCGACACACAT...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGGCAGTGTGTTCCCCGTaGGACCAAGGGTCATCCCCC +
Preference number: 2 (lower is better)
Translates to: WASSAAGMPDRILTVQGKAVCSP*DQGSSP
Trigger: GGGGGATGACCCTTGGTCCCACGGGGAACACACTGC...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACGTGTCGGTGCGTGCCTaGACATGGGTTCACACCCAT +
Preference number: 2 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDVSVRA*TWVHTH
Trigger: ATGGGTGTGAACCCATGTCCAGGCACGCACCGACAC...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACGGTCCCAACTCCAGGTaGCAGAAGGCTAAAGAGTCG +
Preference number: 2 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDGPNSR*QKAKES
Trigger: CGACTCTTTAGCCTTCTGTCACCTGGAGTTGGGACC...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp TGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACAGTGCTGCTAAGGGACTGTCTGTGTaGAGCTCACGAATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: WSPAPHGAQLQPTRYSAAKGLSV*SSRILP
Trigger: TGGGAGGATTCGTGAGCTGCACACAGACAGTCCCTT...AGCAGCACTGTATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp AGTGAGGGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTCCATGGCAGGCCTGCTaGAGCCTAAGCCTGCAGACC +
Preference number: 2 (lower is better)
Translates to: SEGSEAREQGSDPASAPFPWQAC*SLSLQT
Trigger: GGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGG...AAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACGAACTTGCCCATTTCTaGCTGACTGCCTGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDELAHF*LTACPS
Trigger: TGAGGGGCAGGCAGTCAGGCAGAAATGGGCAAGTTC...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp TTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCGCACCAGGCAACTCAGCATaGAAGGAACAGTGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: FLGCRHARQNPNGAREAAPGNSA*KEQWPG
Trigger: GCCCGGCCACTGTTCCTTCCATGCTGAGTTGCCTGG...TGCGGCTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGCCAGGCAACTCAGCATaGAAGGAACAGTGGCCGGGC +
Preference number: 2 (lower is better)
Translates to: GSEAREQGSDPASAPFVLPGNSA*KEQWPG
Trigger: GCCCGGCCACTGTTCCTTCCATGCTGAGTTGCCTGG...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp TGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTGTCCCCGCAGCCAGATaGGTCGTCCAGGCAACTCAG +
Preference number: 2 (lower is better)
Translates to: CSLSLQTLHPGYRILQSSVPAAR*VVQATQ
Trigger: CTGAGTTGCCTGGACGACCCATCTGGCTGCGGGGAC...ACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCAGTGCGTGCCTGGACATaGGTTCACACCCATGGCAGG +
Preference number: 2 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSVRAWT*VHTHGR
Trigger: CCTGCCATGGGTGTGAACCCATGTCCAGGCACGCAC...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp TTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCGCACATCCAGGCTCCGAGTaGATGCCTAGGACACTCAGG +
Preference number: 2 (lower is better)
Translates to: FLGCRHARQNPNGAREAAHPGSE*MPRTLR
Trigger: CCTGAGTGTCCTAGGCATTCACTCGGAGCCTGGATG...TGCGGCTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCACTGGGCTTCCTCGGCTaGAGGCATGCCAGACAGAAT +
Preference number: 2 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSLGFLG*RHARQN
Trigger: ATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAG...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCATTCTGCCTGACTGCCTaGCCCTCATCTAGGCCCTAC +
Preference number: 2 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSFCLTA*PSSRPY
Trigger: GTAGGGCCTAGATGAGGGGCAGGCAGTCAGGCAGAA...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp TCCATCCAGGCTACCGCATTCTACAGAGCAGTGTGTTCCCCGTGGGACCAAGGGTGGGAACGCTCTCACTaGTCCTGGGCACGAATGCCA +
Preference number: 2 (lower is better)
Translates to: SIQATAFYRAVCSPWDQGWERSH*SWARMP
Trigger: TGGCATTCGTGCCCAGGACCAGTGAGAGCGTTCCCA...CCCTTGGTCCCACGGGGAACACACTGCTCTGTAGAATGCGGTAGCCTGGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp TTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCGCAGTGTCGGTGCGTGCCTaGACATGGGTTCACACCCAT +
Preference number: 2 (lower is better)
Translates to: FLGCRHARQNPNGAREAAVSVRA*TWVHTH
Trigger: ATGGGTGTGAACCCATGTCCAGGCACGCACCGACAC...TGCGGCTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGGGTCCCAACTCCAGGTaGCAGAAGGCTAAAGAGTCG +
Preference number: 2 (lower is better)
Translates to: GSEAREQGSDPASAPFVLGPNSR*QKAKES
Trigger: CGACTCTTTAGCCTTCTGTCACCTGGAGTTGGGACC...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAGTCATTTCCCAAACATaGCAGGGCCATGAGCTTAGT +
Preference number: 2 (lower is better)
Translates to: RAGWSWASSAAGMPDRILVISQT*QGHELS
Trigger: ACTAAGCTCATGGCCCTGTCATGTTTGGGAAATGAC...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGTGGCCAGGTGCGGTCTaGATTCCTGAGATGTCCCTA +
Preference number: 2 (lower is better)
Translates to: WASSAAGMPDRILTVQGKWPGAV*IPEMSL
Trigger: TAGGGACATCTCAGGAATTCAGACCGCACCTGGCCA...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp GCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGCAGGCTCCGAGTGAATaGCTAGGACACTCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: ACCSLSLQTLHPGYRILQQAPSE*LGHSGH
Trigger: ATGACCTGAGTGTCCTAGGCATTCACTCGGAGCCTG...CTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp TATATCTGCAAAAGGGCTCACGGTAGGCTGGTTCCCAGGGCTGGGACCTGGGTGGAACTTGCCCATTTCTaGCTGACTGCCTGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: YICKRAHGRLVPRAGTWVELAHF*LTACPS
Trigger: TGAGGGGCAGGCAGTCAGGCAGAAATGGGCAAGTTC...CACCCAGGTCCCAGCCCTGGGAACCAGCCTACCGTGAGCCCTTTTGCAGATATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp GCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGCGCCACACAGACCCGTaGTTAGAGGGAGATTTTGTG +
Preference number: 2 (lower is better)
Translates to: ACCSLSLQTLHPGYRILQRHTDP*LEGDFV
Trigger: CACAAAATCTCCCTCTAACCACGGGTCTGTGTGGCG...CTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCGTTACCACACCCCTCTaGCCTCAATCGTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: RPENKGQILPRLLLCCEPVTTPL*PQSSHL
Trigger: GAGATGAGACGATTGAGGCCAGAGGGGTGTGGTAAC...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCATGCGGTCTGAATTCCTaGGATGTCCCTAAATGCTCC +
Preference number: 2 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSCGLNS*DVPKCS
Trigger: GGAGCATTTAGGGACATCTCAGGAATTCAGACCGCA...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp GAAAAGGACTCCCAGGATGCTAGGATGCTGCACCCAGGGTTCAGGACTCCTCAGGTTACCACACCCCTCTaGCCTCAATCGTCTCATCTC +
Preference number: 2 (lower is better)
Translates to: EKDSQDARMLHPGFRTPQVTTPL*PQSSHL
Trigger: GAGATGAGACGATTGAGGCCAGAGGGGTGTGGTAAC...CTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp GAAAAGGACTCCCAGGATGCTAGGATGCTGCACCCAGGGTTCAGGACTCCTCAGTGCGGTCTGAATTCCTaGGATGTCCCTAAATGCTCC +
Preference number: 2 (lower is better)
Translates to: EKDSQDARMLHPGFRTPQCGLNS*DVPKCS
Trigger: GGAGCATTTAGGGACATCTCAGGAATTCAGACCGCA...CTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp CTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTGTGTTCAAGGGACTGTCTGTGTaGAGCTCACGAATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: LSLQTLHPGYRILQSSVFKGLSV*SSRILP
Trigger: TGGGAGGATTCGTGAGCTGCACACAGACAGTCCCTT...GAACACACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp GAGAAGCACGCCGTCATCTTCATACCTCGAGGACTTTTAATGAATTTTCTCTTACCCGCACACATGTCCTaGGCCTGGGGCATCAGAGAG +
Preference number: 2 (lower is better)
Translates to: EKHAVIFIPRGLLMNFLLPAHMS*AWGIRE
Trigger: CTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGG...TAAGAGAAAATTCATTAAAAGTCCTCGAGGTATGAAGATGACGGCGTGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATAAGGGCCGGCTGGTCCTaGGCTTCCTCGGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIRAGWS*ASSAAG
Trigger: GCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATACCCAACCCAGGGGCATaGCGCCACACAGACCCGTGG +
Preference number: 2 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIPNPGA*RHTDPW
Trigger: CCACGGGTCTGTGTGGCGGCATGCCCCTGGGTTGGG...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp GAGAAGCACGCCGTCATCTTCATACCTCGAGGACTTTTAATGAATTTTCTCTTACGCTCTCACTGGTCCTaGGCACGAATGCCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: EKHAVIFIPRGLLMNFLLRSHWS*ARMPVA
Trigger: AGCCACTGGCATTCGTGCCCAGGACCAGTGAGAGCG...TAAGAGAAAATTCATTAAAAGTCCTCGAGGTATGAAGATGACGGCGTGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATAGCTGGTTCCCAGGGCTaGGACCTGGGTGAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIAGSQG*DLGEGV
Trigger: CACTCCCTCACCCAGGTCCCAGCCCTGGGAACCAGC...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATAGGGCTCACGGTAGGCTaGTTCCCAGGGCTGGGACCT +
Preference number: 2 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIGLTVG*FPGLGP
Trigger: AGGTCCCAGCCCTGGGAACCAGCCTACCGTGAGCCC...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR TCA 90 bp GAGAAGCACGCCGTCATCTTCATACCTCGAGGACTTTTAATGAATTTTCTCTTATGGCCAGGTGCGGTCTaGATTCCTGAGATGTCCCTA +
Preference number: 2 (lower is better)
Translates to: EKHAVIFIPRGLLMNFLLWPGAV*IPEMSL
Trigger: TAGGGACATCTCAGGAATTCAGACCGCACCTGGCCA...TAAGAGAAAATTCATTAAAAGTCCTCGAGGTATGAAGATGACGGCGTGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATAGCAGTGTGTTCCCCGTaGGACCAAGGGTCATCCCCC +
Preference number: 2 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIAVCSP*DQGSSP
Trigger: GGGGGATGACCCTTGGTCCCACGGGGAACACACTGC...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATATTCTGCCTGACTGCCTaGCCCTCATCTAGGCCCTAC +
Preference number: 2 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIFCLTA*PSSRPY
Trigger: GTAGGGCCTAGATGAGGGGCAGGCAGTCAGGCAGAA...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATACACATGTCCTGCGCCTaGGGCATCAGAGAGACCTCA +
Preference number: 2 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIHMSCA*GIRETS
Trigger: TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTG...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR GCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATAAGGATGCTAGGATGCTaGACCCAGGGTTCAGGACTC +
Preference number: 2 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIRMLGC*TQGSGL
Trigger: GAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCT...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 72 bp GCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTaGTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGC +
Preference number: 3 (lower is better)
Translates to: ACLDMGSHPWQA*CSLSLQTLHPG
Trigger: GCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR CCA 72 bp TGTGTCGGTGCGTGCCTGGACATGGGTTCACACCCATaGCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTC +
Preference number: 3 (lower is better)
Translates to: CVGACLDMGSHP*QACCSLSLQTL
Trigger: GAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR CCA 72 bp CTGGCTACAGGAACCCCTTCAGCCAAACGGGATTCCTaGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCA +
Preference number: 3 (lower is better)
Translates to: LATGTPSAKRDS*SPAPHGAQLQP
Trigger: TGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGTTTGGCTGAAGGGGTTCCTGTAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR TCA 72 bp ACAGCTGTGGGCCTGGCCAGGTGCGGTCTGAATTCCTaGGATGTCCCTAAATGCTCCCTCGGAGGGCCTCCG +
Preference number: 3 (lower is better)
Translates to: TAVGLARCGLNS*DVPKCSLGGPP
Trigger: CGGAGGCCCTCCGAGGGAGCATTTAGGGACATCTCAGGAATTCAGACCGCACCTGGCCAGGCCCACAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 72 bp TGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTaGAGCCTAAGCCTGCAGACCCTCCATCCAGGCTAC +
Preference number: 3 (lower is better)
Translates to: CLDMGSHPWQAC*SLSLQTLHPGY
Trigger: GTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 72 bp AGGAACCCCTTCAGCCAAACGGGATTCCTGGAGCCCTaGACCCCACGGCGCTCAGCTTCAGCCAACCCGATA +
Preference number: 3 (lower is better)
Translates to: RNPFSQTGFLEP*TPRRSASANPI
Trigger: TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGTTTGGCTGAAGGGGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR CCA 72 bp CCTGACCTGCCTGCTAGGCCAGTCCCCGCAGCCAGATaGGTCGTCCAGGCAACTCAGCATGGAAGGAACAGT +
Preference number: 3 (lower is better)
Translates to: PDLPARPVPAAR*VVQATQHGRNS
Trigger: ACTGTTCCTTCCATGCTGAGTTGCCTGGACGACCCATCTGGCTGCGGGGACTGGCCTAGCAGGCAGGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR TCA 72 bp CTCACGGTAGGCTGGTTCCCAGGGCTGGGACCTGGGTaGGGGAGTGACACCCTTCTCTCAGATGTACAACGG +
Preference number: 3 (lower is better)
Translates to: LTVGWFPGLGPG*GSDTLLSDVQR
Trigger: CCGTTGTACATCTGAGAGAAGGGTGTCACTCCCTCACCCAGGTCCCAGCCCTGGGAACCAGCCTACCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR TCA 72 bp ACCCCTGATGGGGATGCGCAGGGTCCCAACTCCAGGTaGCAGAAGGCTAAAGAGTCGTTCCAAGGCCCTGAC +
Preference number: 3 (lower is better)
Translates to: TPDGDAQGPNSR*QKAKESFQGPD
Trigger: GTCAGGGCCTTGGAACGACTCTTTAGCCTTCTGTCACCTGGAGTTGGGACCCTGCGCATCCCCATCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 72 bp TCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTaGGTGCCTGGACATGGGTTCACACCCATGGCAGGC +
Preference number: 3 (lower is better)
Translates to: SIKRGACVHVCR*VPGHGFTPMAG
Trigger: GCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACACACATGCACGCACGCACCCCTCTTAATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 72 bp CAGTGTGGGCAGAAAAGGACTCCCAGGATGCTAGGATaGTGCACCCAGGGTTCAGGACTCCTCAGAGCTCAC +
Preference number: 3 (lower is better)
Translates to: QCGQKRTPRMLG*CTQGSGLLRAH
Trigger: GTGAGCTCTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTCTGCCCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 72 bp AGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTaGATGTGTGTCGGTGCGTGCCTGGACATGGGTTCA +
Preference number: 3 (lower is better)
Translates to: RTHLVQLRGVRA*MCVGACLDMGS
Trigger: TGAACCCATGTCCAGGCACGCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CAA 90 bp TTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCGCAAAACACAGGACCCACTaGGTTCAATTAAGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: FLGCRHARQNPNGAREAAKHRTH*VQLRGV
Trigger: CACCCCTCTTAATTGAACCAAGTGGGTCCTGTGTTT...TGCGGCTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CAA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGAAACACAGGACCCACTaGGTTCAATTAAGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: WASSAAGMPDRILTVQGKKHRTH*VQLRGV
Trigger: CACCCCTCTTAATTGAACCAAGTGGGTCCTGTGTTT...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR-3UTR CAA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCAGAGCTCACACCAGTTTaGAACAGGACCCTTAAAAAT +
Preference number: 3 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSELTPV*NRTLKN
Trigger: ATTTTTAAGGGTCCTGTTCAAAACTGGTGTGAGCTC...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR TCA 72 bp TTCTTGGTCCACATAGAAATTGAGTGGAGCTGGCACTaGAAGGGCCTGCTTTTCTCCACCCGCACACATGTC +
Preference number: 3 (lower is better)
Translates to: FLVHIEIEWSWH*KGLLFSTRTHV
Trigger: GACATGTGTGCGGGTGGAGAAAAGCAGGCCCTTTCAGTGCCAGCTCCACTCAATTTCTATGTGGACCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR TCA 72 bp GCTTCCCAAACCAGGAGGGCGTCCAAGGGAGAAGAATaGAGATTTAGTCATTTCCCAAACATGACAGGGCCA +
Preference number: 3 (lower is better)
Translates to: ASQTRRASKGEE*RFSHFPNMTGP
Trigger: TGGCCCTGTCATGTTTGGGAAATGACTAAATCTTCATTCTTCTCCCTTGGACGCCCTCCTGGTTTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR GCA 72 bp GTAGAACCAGCCCCCATCATCCAGGCTCCGAGTGAATaGCTAGGACACTCAGGTCATTGTTCAAGTAAACAA +
Preference number: 3 (lower is better)
Translates to: VEPAPIIQAPSE*LGHSGHCSSKQ
Trigger: TTGTTTACTTGAACAATGACCTGAGTGTCCTAGGCATTCACTCGGAGCCTGGATGATGGGGGCTGGTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR TCA 72 bp AAAGTACCTACCTTGAAGGACCATCTGAGGATGAAATaGGTCTATATCTGCAAAAGGGCTCACGGTAGGCTG +
Preference number: 3 (lower is better)
Translates to: KVPTLKDHLRMK*VYICKRAHGRL
Trigger: CAGCCTACCGTGAGCCCTTTTGCAGATATAGACTCATTTCATCCTCAGATGGTCCTTCAAGGTAGGTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp CTGACTGCCTGCCCCTCATCTAGGCCCTACCGGTTCCCACCACCGCCCTGGCCCCCAGGCCTGTGGAGCTaGCACGGGCGGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTACPSSRPYRFPPPPWPPGLWS*HGRAGQ
Trigger: CTGCCCTGCCCGCCCGTGTCAGCTCCACAGGCCTGG...GGGCCAGGGCGGTGGTGGGAACCGGTAGGGCCTAGATGAGGGGCAGGCAGTCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTCCCGCCCGGGGTCTaGAAGGTCCCCCTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRLPPGV*KVPLRR
Trigger: TCTCCGGAGGGGGACCTTCCAGACCCCGGGCGGGAG...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417669.6
CDS-3UTR CCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGAGGGCCGGCTGGTCCTaGGCTTCCTCGGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRRAGWS*ASSAAG
Trigger: GCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CTGACTGCCTGCCCCTCATCTAGGCCCTACCGGTTCCCACCACCGCCCTGGCCCAGGGCCGGCTGGTCCTaGGCTTCCTCGGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LTACPSSRPYRFPPPPWPRAGWS*ASSAAG
Trigger: GCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT...GGGCCAGGGCGGTGGTGGGAACCGGTAGGGCCTAGATGAGGGGCAGGCAGTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGGTGGGACTGGGAGAATaGCATGCCCAGGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRVGLGE*HAQAAG
Trigger: CCCTGCGGCCTGGGCATGGCATTCTCCCAGTCCCAC...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CTGACTGCCTGCCCCTCATCTAGGCCCTACCGGTTCCCACCACCGCCCTGGCCCATGATGAGCCGGCTGTaGTGGTGCCGCCGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LTACPSSRPYRFPPPPWPMMSRL*WCRRAA
Trigger: GGCCGCTCGGCGGCACCAGCACAGCCGGCTCATCAT...GGGCCAGGGCGGTGGTGGGAACCGGTAGGGCCTAGATGAGGGGCAGGCAGTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGGGGCTCACGGTAGGCTaGTTCCCAGGGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRGLTVG*FPGLGP
Trigger: AGGTCCCAGCCCTGGGAACCAGCCTACCGTGAGCCC...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp CTGACTGCCTGCCCCTCATCTAGGCCCTACCGGTTCCCACCACCGCCCTGGCCCGGAAGCCCCGCACGGTaGCCTCCGAGTCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LTACPSSRPYRFPPPPWPGSPAR*PPSPEG
Trigger: ACCTTCAGGACTCGGAGGTCACCGTGCGGGGCTTCC...GGGCCAGGGCGGTGGTGGGAACCGGTAGGGCCTAGATGAGGGGCAGGCAGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTACCAGGCCTGTGGAGCTaGCACGGGCGGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RAGWSWASSAAGMPDRILPGLWS*HGRAGQ
Trigger: CTGCCCTGCCCGCCCGTGTCAGCTCCACAGGCCTGG...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTGGTGCCATCACGTGGGACTaGGAGAATGCCATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AWGPLGPCATLQFTGPAGAITWD*ENAMPR
Trigger: CCTGGGCATGGCATTCTCCCAGTCCCACGTGATGGC...ACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTGGTGAAGCGGGTGTAGCCTaGAGGTTTGGGGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: AWGPLGPCATLQFTGPAGEAGVA*RFGGIV
Trigger: CACGATGCCCCCAAACCTCCAGGCTACACCCGCTTC...ACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGTCGGGGTCCTCCTCCTaGGCCACCATCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRSGSSS*ATISST
Trigger: AGTGGAAGAGATGGTGGCCCAGGAGGAGGACCCCGA...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417669.6
CDS-3UTR CCA 90 bp TGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAGCCTCAGACTCCGGATCCGTaGCCTCCGCAGCGGGCACCG +
Preference number: 4 (lower is better)
Translates to: CRCVPGHGFTPMAGLLQPQTPDP*PPQRAP
Trigger: CGGTGCCCGCTGCGGAGGCCACGGATCCGGAGTCTG...AGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417669.6
CDS-3UTR CCA 90 bp GCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTGGTCCAGGCAACTCAGCATaGAAGGAACAGTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: AWGPLGPCATLQFTGPAGPGNSA*KEQWPG
Trigger: GCCCGGCCACTGTTCCTTCCATGCTGAGTTGCCTGG...ACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACGGGGCTGCTGGAGCCTaGGGCCCGCTCGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDGAAGA*GPLGPC
Trigger: ACAGGGACCGAGCGGGCCCCAGGCTCCAGCAGCCCC...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp GCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTGGTGAGTGGAGCTGGCACTaGAAGGGCCTGCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AWGPLGPCATLQFTGPAGEWSWH*KGLLFS
Trigger: GGAGAAAAGCAGGCCCTTTCAGTGCCAGCTCCACTC...ACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CTGACTGCCTGCCCCTCATCTAGGCCCTACCGGTTCCCACCACCGCCCTGGCCCGTGAAGTCCCCAGCGTaGATCAGCACGTCGCCGTAC +
Preference number: 4 (lower is better)
Translates to: LTACPSSRPYRFPPPPWPVKSPA*ISTSPY
Trigger: GTACGGCGACGTGCTGATCCACGCTGGGGACTTCAC...GGGCCAGGGCGGTGGTGGGAACCGGTAGGGCCTAGATGAGGGGCAGGCAGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTGGTCACATGTCCTGCGCCTaGGGCATCAGAGAGACCTCA +
Preference number: 4 (lower is better)
Translates to: AWGPLGPCATLQFTGPAGHMSCA*GIRETS
Trigger: TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTG...ACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGGGTCCCAACTCCAGGTaGCAGAAGGCTAAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRGPNSR*QKAKES
Trigger: CGACTCTTTAGCCTTCTGTCACCTGGAGTTGGGACC...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGGGGGCTGCTGGAGCCTaGGGCCCGCTCGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GSEAREQGSDPASAPFVLGAAGA*GPLGPC
Trigger: ACAGGGACCGAGCGGGCCCCAGGCTCCAGCAGCCCC...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAGCCTGCTGGTTCCCAGGGCTaGGACCTGGGTGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: CRCVPGHGFTPMAGLLQPAGSQG*DLGEGV
Trigger: CACTCCCTCACCCAGGTCCCAGCCCTGGGAACCAGC...AGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACGGTTTGGGGGCATCGTaGGGCACCGGGTCCACCATC +
Preference number: 4 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDGLGAS*GTGSTI
Trigger: GATGGTGGACCCGGTGCCTCACGATGCCCCCAAACC...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACAGTGCTGCTCCCCAGCTCCCAGTCTaGATAGGTCGGGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WSPAPHGAQLQPTRYSAAPQLPV*IGRGPP
Trigger: AGGAGGACCCCGACCTATTCAGACTGGGAGCTGGGG...AGCAGCACTGTATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417669.6
CDS-3UTR TCA 90 bp CTGACTGCCTGCCCCTCATCTAGGCCCTACCGGTTCCCACCACCGCCCTGGCCCACCTGGGTGAGGGAGTaGCACCCTTCTCTCAGATGT +
Preference number: 4 (lower is better)
Translates to: LTACPSSRPYRFPPPPWPTWVRE*HPSLRC
Trigger: ACATCTGAGAGAAGGGTGTCACTCCCTCACCCAGGT...GGGCCAGGGCGGTGGTGGGAACCGGTAGGGCCTAGATGAGGGGCAGGCAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TTCACACCCATGGCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGGGGCTGGGACCTGGGTaGGGGAGTGACACCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FTPMAGLLQPKPADPPSRGLGPG*GSDTLL
Trigger: GAGAAGGGTGTCACTCCCTCACCCAGGTCCCAGCCC...CCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TATATCTGCAAAAGGGCTCACGGTAGGCTGGTTCCCAGGGCTGGGACCTGGGTGAGCCGGCTGTGCTGGTaGCGCCGAGCGGCCATCACG +
Preference number: 4 (lower is better)
Translates to: YICKRAHGRLVPRAGTWVSRLCW*RRAAIT
Trigger: CGTGATGGCCGCTCGGCGGCACCAGCACAGCCGGCT...CACCCAGGTCCCAGCCCTGGGAACCAGCCTACCGTGAGCCCTTTTGCAGATATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTGGTAAGGGACTGTCTGTGTaGAGCTCACGAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: AWGPLGPCATLQFTGPAGKGLSV*SSRILP
Trigger: TGGGAGGATTCGTGAGCTGCACACAGACAGTCCCTT...ACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACCATGGCAGGCCTGCTaGAGCCTAAGCCTGCAGACC +
Preference number: 4 (lower is better)
Translates to: TGFLEPCTPRRSASANPIPWQAC*SLSLQT
Trigger: GGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGG...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CTAGGCCAGTCCCCGCAGCCAGATGGGTCGTCCAGGCAACTCAGCATGGAAGGAGGATTCCTGGAGCCCTaGACCCCACGGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LGQSPQPDGSSRQLSMEGGFLEP*TPRRSA
Trigger: AGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCC...TCCTTCCATGCTGAGTTGCCTGGACGACCCATCTGGCTGCGGGGACTGGCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAGACCTGGAAACAGACTaGCCCCGGGCTCCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: RAGWSWASSAAGMPDRILDLETD*PRAPLR
Trigger: CCGAAGAGGAGCCCGGGGCCAGTCTGTTTCCAGGTC...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443721.2
CDS-3UTR CCA 90 bp TGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAGCCTAGAAGCTGTCCAAGGTaGGGCTGCTGGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CRCVPGHGFTPMAGLLQPRSCPR*GCWSLG
Trigger: CCCCAGGCTCCAGCAGCCCCACCTTGGACAGCTTCT...AGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TTCACACCCATGGCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGGCCAAACGGGATTCCTaGAGCCCTGCACCCCACGGC +
Preference number: 4 (lower is better)
Translates to: FTPMAGLLQPKPADPPSRAKRDS*SPAPHG
Trigger: GCCGTGGGGTGCAGGGCTCCAGGAATCCCGTTTGGC...CCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTGCCAAACGGGATTCCTaGAGCCCTGCACCCCACGGC +
Preference number: 4 (lower is better)
Translates to: AGLLQPKPADPPSRLPHSAKRDS*SPAPHG
Trigger: GCCGTGGGGTGCAGGGCTCCAGGAATCCCGTTTGGC...AGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TATATCTGCAAAAGGGCTCACGGTAGGCTGGTTCCCAGGGCTGGGACCTGGGTGGGCCTCGCGGGAGGTTaGAGCCCCAGCCGTAGAACC +
Preference number: 4 (lower is better)
Translates to: YICKRAHGRLVPRAGTWVGLAGG*SPSRRT
Trigger: GGTTCTACGGCTGGGGCTTCAACCTCCCGCGAGGCC...CACCCAGGTCCCAGCCCTGGGAACCAGCCTACCGTGAGCCCTTTTGCAGATATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp GCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTGTGTGGGGAGGTCGATaGCTATGGGCGGGTTCACGG +
Preference number: 4 (lower is better)
Translates to: AGLLQPKPADPPSRLPHSVWGGR*LWAGSR
Trigger: CCGTGAACCCGCCCATAGTCATCGACCTCCCCACAC...AGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CTAGGCCAGTCCCCGCAGCCAGATGGGTCGTCCAGGCAACTCAGCATGGAAGGAACTGGGAGAATGCCATaGCCAGGCCGCAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LGQSPQPDGSSRQLSMEGTGRMP*PGRRGG
Trigger: TCCTCCCCTGCGGCCTGGGCATGGCATTCTCCCAGT...TCCTTCCATGCTGAGTTGCCTGGACGACCCATCTGGCTGCGGGGACTGGCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GAAAAGGACTCCCAGGATGCTAGGATGCTGCACCCAGGGTTCAGGACTCCTCAGAGCCGGCTGTGCTGGTaGCGCCGAGCGGCCATCACG +
Preference number: 4 (lower is better)
Translates to: EKDSQDARMLHPGFRTPQSRLCW*RRAAIT
Trigger: CGTGATGGCCGCTCGGCGGCACCAGCACAGCCGGCT...CTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCACCCAACCCAGGGGCATaGCGCCACACAGACCCGTGG +
Preference number: 4 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSPNPGA*RHTDPW
Trigger: CCACGGGTCTGTGTGGCGGCATGCCCCTGGGTTGGG...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTACCGATACAGTGCTGCTaGCAGGCTTCCAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: RAGWSWASSAAGMPDRILPIQCC*QASRDS
Trigger: GCTGTCCCTGGAAGCCTGGCAGCAGCACTGTATCGG...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTCCCGCACACATGTCCTaGGCCTGGGGCATCAGAGAG +
Preference number: 4 (lower is better)
Translates to: AGLLQPKPADPPSRLPHSPAHMS*AWGIRE
Trigger: CTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGG...AGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACAGTGCTGCTCGAGCGGCCATCACGTaGGACTGGGAGAATGCCATG +
Preference number: 4 (lower is better)
Translates to: WSPAPHGAQLQPTRYSAARAAIT*DWENAM
Trigger: CATGGCATTCTCCCAGTCCCACGTGATGGCCGCTCG...AGCAGCACTGTATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACAGTGCTGCTTGTAGCCTGGAGGTTTaGGGGCATCGTGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: WSPAPHGAQLQPTRYSAACSLEV*GHREAP
Trigger: CGGTGCCTCACGATGCCCCCAAACCTCCAGGCTACA...AGCAGCACTGTATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CTGACTGCCTGCCCCTCATCTAGGCCCTACCGGTTCCCACCACCGCCCTGGCCCCCCAGTGGTGGTCCATaGGTTATCAGGATGTCTACG +
Preference number: 4 (lower is better)
Translates to: LTACPSSRPYRFPPPPWPPSGGP*VIRMST
Trigger: CGTAGACATCCTGATAACCCATGGACCACCACTGGG...GGGCCAGGGCGGTGGTGGGAACCGGTAGGGCCTAGATGAGGGGCAGGCAGTCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTACGCTCTCACTGGTCCTaGGCACGAATGCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RAGWSWASSAAGMPDRILRSHWS*ARMPVA
Trigger: AGCCACTGGCATTCGTGCCCAGGACCAGTGAGAGCG...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAGCCTGTGCGTGCCTGGACATaGGTTCACACCCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: CRCVPGHGFTPMAGLLQPVRAWT*VHTHGR
Trigger: CCTGCCATGGGTGTGAACCCATGTCCAGGCACGCAC...AGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCCTCATAAACATCCCTaGCTACAGGAACCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRPHKHP*LQEPLQ
Trigger: CTGAAGGGGTTCCTGTAGCCAGGGATGTTTATGAGG...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTGGTCCTCATAAACATCCCTaGCTACAGGAACCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AWGPLGPCATLQFTGPAGPHKHP*LQEPLQ
Trigger: CTGAAGGGGTTCCTGTAGCCAGGGATGTTTATGAGG...ACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCGCAGGTTTGGGGGCATCGTaGGGCACCGGGTCCACCATC +
Preference number: 4 (lower is better)
Translates to: FLGCRHARQNPNGAREAAGLGAS*GTGSTI
Trigger: GATGGTGGACCCGGTGCCTCACGATGCCCCCAAACC...TGCGGCTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TCCATCCAGGCTACCGCATTCTACAGAGCAGTGTGTTCCCCGTGGGACCAAGGGGGAAGCCCCGCACGGTaGCCTCCGAGTCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SIQATAFYRAVCSPWDQGGSPAR*PPSPEG
Trigger: ACCTTCAGGACTCGGAGGTCACCGTGCGGGGCTTCC...CCCTTGGTCCCACGGGGAACACACTGCTCTGTAGAATGCGGTAGCCTGGATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACATCCAGGCTCCGAGTaGATGCCTAGGACACTCAGG +
Preference number: 4 (lower is better)
Translates to: TGFLEPCTPRRSASANPIHPGSE*MPRTLR
Trigger: CCTGAGTGTCCTAGGCATTCACTCGGAGCCTGGATG...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CAGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTGCATGATGAGCCGGCTGTaGTGGTGCCGCCGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: QDPLGSIKRGACVHVCRCMMSRL*WCRRAA
Trigger: GGCCGCTCGGCGGCACCAGCACAGCCGGCTCATCAT...GCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CAGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTGCGCACAGCAGGTAGCCTaGAGCGGCCGGAGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: QDPLGSIKRGACVHVCRCAQQVA*SGRSPN
Trigger: GTTGGGGCTCCGGCCGCTGCAGGCTACCTGCTGTGC...GCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417669.6
CDS-3UTR GCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCAGGCTGGACGCGCCTCTaGACCGTGTTGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSGWTRL*TVLSSS
Trigger: GGAGCTGCTCAACACGGTGCAGAGGCGCGTCCAGCC...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGGCTGGTAGTTCACAGTaGATACGGACGCATTCACAT +
Preference number: 4 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRAGSSQ*IRTHSH
Trigger: ATGTGAATGCGTCCGTATGCACTGTGAACTACCAGC...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTACTGGGCTTCCTCGGCTaGAGGCATGCCAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: RAGWSWASSAAGMPDRILLGFLG*RHARQN
Trigger: ATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAG...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGCCCGCTCGGTCCCTGTaGCACCCTCCAATTCACAGG +
Preference number: 4 (lower is better)
Translates to: ACCSLSLQTLHPGYRILQPARSL*HPPIHR
Trigger: CCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGG...CTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCCGATACAGTGCTGCTaGCAGGCTTCCAGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDPIQCC*QASRDS
Trigger: GCTGTCCCTGGAAGCCTGGCAGCAGCACTGTATCGG...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GAAAAGGACTCCCAGGATGCTAGGATGCTGCACCCAGGGTTCAGGACTCCTCAGATGAGCCGGCTGTGCTaGTGCCGCCGAGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: EKDSQDARMLHPGFRTPQMSRLC*CRRAAI
Trigger: GATGGCCGCTCGGCGGCACCAGCACAGCCGGCTCAT...CTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTCATCTGCACATGCGGTaGCTGGAAGCGGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: AGLLQPKPADPPSRLPHSHLHMR*LEAALV
Trigger: AACCAGGGCCGCTTCCAGCCACCGCATGTGCAGATG...AGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACTTCTCCAGCAGGGCTTaGCCTCGCGGGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDFSSRA*PRGRLK
Trigger: CTTCAACCTCCCGCGAGGCCAAGCCCTGCTGGAGAA...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGACACCATACCCTTCGTaGATGTGGCCAAAGACATGT +
Preference number: 4 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRTPYPS*MWPKTC
Trigger: ACATGTCTTTGGCCACATCCACGAAGGGTATGGTGT...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TATATCTGCAAAAGGGCTCACGGTAGGCTGGTTCCCAGGGCTGGGACCTGGGTGCCAGGCAAACAGCTGTaGGCCTGGCCAGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: YICKRAHGRLVPRAGTWVPGKQL*AWPGAV
Trigger: GACCGCACCTGGCCAGGCCCACAGCTGTTTGCCTGG...CACCCAGGTCCCAGCCCTGGGAACCAGCCTACCGTGAGCCCTTTTGCAGATATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAGCCTGTGTCGGTGCGTGCCTaGACATGGGTTCACACCCAT +
Preference number: 4 (lower is better)
Translates to: CRCVPGHGFTPMAGLLQPVSVRA*TWVHTH
Trigger: ATGGGTGTGAACCCATGTCCAGGCACGCACCGACAC...AGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCGCAGGGCTCACGGTAGGCTaGTTCCCAGGGCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: FLGCRHARQNPNGAREAAGLTVG*FPGLGP
Trigger: AGGTCCCAGCCCTGGGAACCAGCCTACCGTGAGCCC...TGCGGCTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACAGTGCTGCTCACATGTCCTGCGCCTaGGGCATCAGAGAGACCTCA +
Preference number: 4 (lower is better)
Translates to: WSPAPHGAQLQPTRYSAAHMSCA*GIRETS
Trigger: TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTG...AGCAGCACTGTATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGGGAGCCCCAGCTCAGTaGAGTCCCCAGCGTGGATCA +
Preference number: 4 (lower is better)
Translates to: WASSAAGMPDRILTVQGKGAPAQ*SPQRGS
Trigger: TGATCCACGCTGGGGACTTCACTGAGCTGGGGCTCC...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp CTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTGTGTTCGGCCTCGCGGGAGGTTaGAGCCCCAGCCGTAGAACC +
Preference number: 4 (lower is better)
Translates to: LSLQTLHPGYRILQSSVFGLAGG*SPSRRT
Trigger: GGTTCTACGGCTGGGGCTTCAACCTCCCGCGAGGCC...GAACACACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGGTGTGGGGAGGTCGATaGCTATGGGCGGGTTCACGG +
Preference number: 4 (lower is better)
Translates to: GSEAREQGSDPASAPFVLVWGGR*LWAGSR
Trigger: CCGTGAACCCGCCCATAGTCATCGACCTCCCCACAC...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTATGGCCAGGTGCGGTCTaGATTCCTGAGATGTCCCTA +
Preference number: 4 (lower is better)
Translates to: RAGWSWASSAAGMPDRILWPGAV*IPEMSL
Trigger: TAGGGACATCTCAGGAATTCAGACCGCACCTGGCCA...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp AGTGAGGGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGGGCTGGGACCTGGGTaGGGGAGTGACACCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SEGSEAREQGSDPASAPFGLGPG*GSDTLL
Trigger: GAGAAGGGTGTCACTCCCTCACCCAGGTCCCAGCCC...AAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCACTGGGAGAATGCCATaGCCAGGCCGCAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPENKGQILPRLLLCCEPTGRMP*PGRRGG
Trigger: TCCTCCCCTGCGGCCTGGGCATGGCATTCTCCCAGT...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATAGGTGGTCGTCCCATCTaGCATGACACCATACCCTTC +
Preference number: 4 (lower is better)
Translates to: TGFLEPCTPRRSASANPIGGRPI*HDTIPF
Trigger: GAAGGGTATGGTGTCATGGCAGATGGGACGACCACC...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCCGCTCGGTCCCTGTaGCACCCTCCAATTCACAGG +
Preference number: 4 (lower is better)
Translates to: WASSAAGMPDRILTVQGKPARSL*HPPIHR
Trigger: CCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGG...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAGCCTGAACTTGCCCATTTCTaGCTGACTGCCTGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: CRCVPGHGFTPMAGLLQPELAHF*LTACPS
Trigger: TGAGGGGCAGGCAGTCAGGCAGAAATGGGCAAGTTC...AGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCCCAGGATGCTAGGATaGTGCACCCAGGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDPRMLG*CTQGSG
Trigger: TCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGG...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGTGTAGCCTGGAGGTTTaGGGGCATCGTGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: ACCSLSLQTLHPGYRILQCSLEV*GHREAP
Trigger: CGGTGCCTCACGATGCCCCCAAACCTCCAGGCTACA...CTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCGTACGGCATCTGGATaGGGTCCGTCCTCGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WASSAAGMPDRILTVQGKRTASG*GPSSSG
Trigger: CCCACTCGAGGACGGACCCCATCCAGATGCCGTACG...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTGGTCAGCTTCGACACAGATaGGAAGTAGTAAAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: AWGPLGPCATLQFTGPAGQLRHR*EVVKVL
Trigger: CAGGACTTTTACTACTTCCCATCTGTGTCGAAGCTG...ACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCAGCTTCGACACAGATaGGAAGTAGTAAAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRQLRHR*EVVKVL
Trigger: CAGGACTTTTACTACTTCCCATCTGTGTCGAAGCTG...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACGAACCAGGGCTGCCATaGGGAGCCATAGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDEPGLP*GAIDPE
Trigger: TTCCGGATCTATGGCTCCCCATGGCAGCCCTGGTTC...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TCCATCCAGGCTACCGCATTCTACAGAGCAGTGTGTTCCCCGTGGGACCAAGGGACATGTAACCGCGGCTaGACGCGCCTCTGCACCGTG +
Preference number: 4 (lower is better)
Translates to: SIQATAFYRAVCSPWDQGTCNRG*TRLCTV
Trigger: CACGGTGCAGAGGCGCGTCCAGCCGCGGTTACATGT...CCCTTGGTCCCACGGGGAACACACTGCTCTGTAGAATGCGGTAGCCTGGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCGTCCCCGCAGCCAGATaGGTCGTCCAGGCAACTCAG +
Preference number: 4 (lower is better)
Translates to: RPENKGQILPRLLLCCEPVPAAR*VVQATQ
Trigger: CTGAGTTGCCTGGACGACCCATCTGGCTGCGGGGAC...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCGCAGTCCCCGCAGCCAGATaGGTCGTCCAGGCAACTCAG +
Preference number: 4 (lower is better)
Translates to: FLGCRHARQNPNGAREAAVPAAR*VVQATQ
Trigger: CTGAGTTGCCTGGACGACCCATCTGGCTGCGGGGAC...TGCGGCTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCGCAAGAAGCTGTCCAAGGTaGGGCTGCTGGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FLGCRHARQNPNGAREAARSCPR*GCWSLG
Trigger: CCCCAGGCTCCAGCAGCCCCACCTTGGACAGCTTCT...TGCGGCTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTGCTGGTTCCCAGGGCTaGGACCTGGGTGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: CSLSLQTLHPGYRILQSSAGSQG*DLGEGV
Trigger: CACTCCCTCACCCAGGTCCCAGCCCTGGGAACCAGC...ACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp CAGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTGCGGAGCCCCAGCTCAGTaGAGTCCCCAGCGTGGATCA +
Preference number: 4 (lower is better)
Translates to: QDPLGSIKRGACVHVCRCGAPAQ*SPQRGS
Trigger: TGATCCACGCTGGGGACTTCACTGAGCTGGGGCTCC...GCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp CTAGGCCAGTCCCCGCAGCCAGATGGGTCGTCCAGGCAACTCAGCATGGAAGGATCGTCCCATCTGCCATaGCACCATACCCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LGQSPQPDGSSRQLSMEGSSHLP*HHTLRG
Trigger: TCCACGAAGGGTATGGTGTCATGGCAGATGGGACGA...TCCTTCCATGCTGAGTTGCCTGGACGACCCATCTGGCTGCGGGGACTGGCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCACCGGGTCCACCATCTaGACATGCGGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RPENKGQILPRLLLCCEPTGSTI*TCGGWK
Trigger: CTTCCAGCCACCGCATGTGCAGATGGTGGACCCGGT...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TATATCTGCAAAAGGGCTCACGGTAGGCTGGTTCCCAGGGCTGGGACCTGGGTGACCGGGTCCACCATCTaGACATGCGGTGGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YICKRAHGRLVPRAGTWVTGSTI*TCGGWK
Trigger: CTTCCAGCCACCGCATGTGCAGATGGTGGACCCGGT...CACCCAGGTCCCAGCCCTGGGAACCAGCCTACCGTGAGCCCTTTTGCAGATATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTGTGTTCGGCTGGACGCGCCTCTaGACCGTGTTGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLQTLHPGYRILQSSVFGWTRL*TVLSSS
Trigger: GGAGCTGCTCAACACGGTGCAGAGGCGCGTCCAGCC...GAACACACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TTCACACCCATGGCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGGGTGGTCGTCCCATCTaGCATGACACCATACCCTTC +
Preference number: 4 (lower is better)
Translates to: FTPMAGLLQPKPADPPSRGGRPI*HDTIPF
Trigger: GAAGGGTATGGTGTCATGGCAGATGGGACGACCACC...CCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACAGGCTCCGAGTGAATaGCTAGGACACTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: TGFLEPCTPRRSASANPIQAPSE*LGHSGH
Trigger: ATGACCTGAGTGTCCTAGGCATTCACTCGGAGCCTG...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACAGTGCTGCTCAGGCTCCGAGTGAATaGCTAGGACACTCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: WSPAPHGAQLQPTRYSAAQAPSE*LGHSGH
Trigger: ATGACCTGAGTGTCCTAGGCATTCACTCGGAGCCTG...AGCAGCACTGTATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CTAGGCCAGTCCCCGCAGCCAGATGGGTCGTCCAGGCAACTCAGCATGGAAGGAAGGATGCTAGGATGCTaGACCCAGGGTTCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LGQSPQPDGSSRQLSMEGRMLGC*TQGSGL
Trigger: GAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCT...TCCTTCCATGCTGAGTTGCCTGGACGACCCATCTGGCTGCGGGGACTGGCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGGCCAACCCGATACAGTaGTGCTGCCAGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSEAREQGSDPASAPFVLANPIQ*CCQASR
Trigger: CCTGGAAGCCTGGCAGCAGCACTGTATCGGGTTGGC...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AAAGTAAATGAGCACAGAACCCCTGATGGGGATGCGCAGGGTCCCAACTCCAGGGGATTCCTGGAGCCCTaGACCCCACGGCGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KVNEHRTPDGDAQGPNSRGFLEP*TPRRSA
Trigger: AGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCC...CCTGGAGTTGGGACCCTGCGCATCCCCATCAGGGGTTCTGTGCTCATTTACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGGGCACTGAAAGGGCCTaGTTTTCTCCACCCGCACAC +
Preference number: 4 (lower is better)
Translates to: ACCSLSLQTLHPGYRILQGTERA*FSPPAH
Trigger: GTGTGCGGGTGGAGAAAAGCAGGCCCTTTCAGTGCC...CTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCATGCACATGCGGTGGCTaGAAGCGGCCCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSCTCGG*KRPWLM
Trigger: CATCAACCAGGGCCGCTTCCAGCCACCGCATGTGCA...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCCATCTGCACATGCGGTaGCTGGAAGCGGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: RPENKGQILPRLLLCCEPHLHMR*LEAALV
Trigger: AACCAGGGCCGCTTCCAGCCACCGCATGTGCAGATG...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGGAAGCGGGTGTAGCCTaGAGGTTTGGGGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: GSEAREQGSDPASAPFVLEAGVA*RFGGIV
Trigger: CACGATGCCCCCAAACCTCCAGGCTACACCCGCTTC...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GAAAAGGACTCCCAGGATGCTAGGATGCTGCACCCAGGGTTCAGGACTCCTCAGTCGCCGTACGGCATCTaGATGGGGTCCGTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: EKDSQDARMLHPGFRTPQSPYGI*MGSVLE
Trigger: CTCGAGGACGGACCCCATCCAGATGCCGTACGGCGA...CTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAGGAGCCCCAACGGGATaGGTAAACAAGTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: RAGWSWASSAAGMPDRILGAPTG*VNKSGT
Trigger: AGTTCCTGACTTGTTTACCCATCCCGTTGGGGCTCC...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417669.6
CDS-3UTR CCA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACCCAGTGGTGGTCCATaGGTTATCAGGATGTCTACG +
Preference number: 4 (lower is better)
Translates to: TGFLEPCTPRRSASANPIPSGGP*VIRMST
Trigger: CGTAGACATCCTGATAACCCATGGACCACCACTGGG...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTACAGGAAGCCCAGTGGTaGTCCATGGGTTATCAGGAT +
Preference number: 4 (lower is better)
Translates to: RAGWSWASSAAGMPDRILQEAQW*SMGYQD
Trigger: ATCCTGATAACCCATGGACCACCACTGGGCTTCCTG...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTACGCCACACAGACCCGTaGTTAGAGGGAGATTTTGTG +
Preference number: 4 (lower is better)
Translates to: RAGWSWASSAAGMPDRILRHTDP*LEGDFV
Trigger: CACAAAATCTCCCTCTAACCACGGGTCTGTGTGGCG...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCGCAGTGCGTGCCTGGACATaGGTTCACACCCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: FLGCRHARQNPNGAREAAVRAWT*VHTHGR
Trigger: CCTGCCATGGGTGTGAACCCATGTCCAGGCACGCAC...TGCGGCTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATAGTTACCACACCCCTCTaGCCTCAATCGTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: TGFLEPCTPRRSASANPIVTTPL*PQSSHL
Trigger: GAGATGAGACGATTGAGGCCAGAGGGGTGTGGTAAC...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
3UTR CAA 72 bp CCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTaGTGCTGTGAGCCCCCAGGCAAGTTACCACACCCC +
Preference number: 4 (lower is better)
Translates to: PENKGQILPRLL*CCEPPGKLPHP
Trigger: GGGGTGTGGTAACTTGCCTGGGGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp GCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGACCTGGGTGAGGGAGTaGCACCCTTCTCTCAGATGT +
Preference number: 4 (lower is better)
Translates to: ACCSLSLQTLHPGYRILQTWVRE*HPSLRC
Trigger: ACATCTGAGAGAAGGGTGTCACTCCCTCACCCAGGT...CTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGGAACTTGCCCATTTCTaGCTGACTGCCTGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: ACCSLSLQTLHPGYRILQELAHF*LTACPS
Trigger: TGAGGGGCAGGCAGTCAGGCAGAAATGGGCAAGTTC...CTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCCGCACCCAGGATGCTAGGATaGTGCACCCAGGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: FLGCRHARQNPNGAREAAPRMLG*CTQGSG
Trigger: TCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGG...TGCGGCTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGAACCCGATACAGTGCTaGTGCCAGGCTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GSEAREQGSDPASAPFVLNPIQC*CQASRD
Trigger: GTCCCTGGAAGCCTGGCAGCAGCACTGTATCGGGTT...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AGTGAGGGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGCCAACCCGATACAGTaGTGCTGCCAGGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SEGSEAREQGSDPASAPFANPIQ*CCQASR
Trigger: CCTGGAAGCCTGGCAGCAGCACTGTATCGGGTTGGC...AAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGTGAGGGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGCCATCACGTGGGACTaGGAGAATGCCATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SEGSEAREQGSDPASAPFAITWD*ENAMPR
Trigger: CCTGGGCATGGCATTCTCCCAGTCCCACGTGATGGC...AAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GAAAAGGACTCCCAGGATGCTAGGATGCTGCACCCAGGGTTCAGGACTCCTCAGGGGTCCGTCCTCGAGTaGGTATCAGAGACGCAGACG +
Preference number: 4 (lower is better)
Translates to: EKDSQDARMLHPGFRTPQGSVLE*VSETQT
Trigger: CGTCTGCGTCTCTGATACCCACTCGAGGACGGACCC...CTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CAGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTGCGGGTCCGTCCTCGAGTaGGTATCAGAGACGCAGACG +
Preference number: 4 (lower is better)
Translates to: QDPLGSIKRGACVHVCRCGSVLE*VSETQT
Trigger: CGTCTGCGTCTCTGATACCCACTCGAGGACGGACCC...GCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AAAGTAAATGAGCACAGAACCCCTGATGGGGATGCGCAGGGTCCCAACTCCAGGCGTACGGCATCTGGATaGGGTCCGTCCTCGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KVNEHRTPDGDAQGPNSRRTASG*GPSSSG
Trigger: CCCACTCGAGGACGGACCCCATCCAGATGCCGTACG...CCTGGAGTTGGGACCCTGCGCATCCCCATCAGGGGTTCTGTGCTCATTTACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TATATCTGCAAAAGGGCTCACGGTAGGCTGGTTCCCAGGGCTGGGACCTGGGTGGAACCAGGGCTGCCATaGGGAGCCATAGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: YICKRAHGRLVPRAGTWVEPGLP*GAIDPE
Trigger: TTCCGGATCTATGGCTCCCCATGGCAGCCCTGGTTC...CACCCAGGTCCCAGCCCTGGGAACCAGCCTACCGTGAGCCCTTTTGCAGATATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGTGAGGGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTTTCTCCAGCAGGGCTTaGCCTCGCGGGAGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: SEGSEAREQGSDPASAPFFSSRA*PRGRLK
Trigger: CTTCAACCTCCCGCGAGGCCAAGCCCTGCTGGAGAA...AAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCCCTCACT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGTGAGGGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTCCAGGCAACTCAGCATaGAAGGAACAGTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SEGSEAREQGSDPASAPFPGNSA*KEQWPG
Trigger: GCCCGGCCACTGTTCCTTCCATGCTGAGTTGCCTGG...AAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGGTGTCGGTGCGTGCCTaGACATGGGTTCACACCCAT +
Preference number: 4 (lower is better)
Translates to: GSEAREQGSDPASAPFVLVSVRA*TWVHTH
Trigger: ATGGGTGTGAACCCATGTCCAGGCACGCACCGACAC...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TCCATCCAGGCTACCGCATTCTACAGAGCAGTGTGTTCCCCGTGGGACCAAGGGGAGCCCAGCTCAGTGTaGGCAGAAAAGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: SIQATAFYRAVCSPWDQGEPSSV*AEKDSQ
Trigger: CTGGGAGTCCTTTTCTGCCCACACTGAGCTGGGCTC...CCCTTGGTCCCACGGGGAACACACTGCTCTGTAGAATGCGGTAGCCTGGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCGGTCCCAACTCCAGGTaGCAGAAGGCTAAAGAGTCG +
Preference number: 4 (lower is better)
Translates to: RPENKGQILPRLLLCCEPGPNSR*QKAKES
Trigger: CGACTCTTTAGCCTTCTGTCACCTGGAGTTGGGACC...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCATGGCCAGGTGCGGTCTaGATTCCTGAGATGTCCCTA +
Preference number: 4 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSWPGAV*IPEMSL
Trigger: TAGGGACATCTCAGGAATTCAGACCGCACCTGGCCA...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TGTCGGTGCGTGCCTGGACATGGGTTCACACCCATGGCAGGCCTGCTGCAGCCTGGTCCACATAGAAATTaGGTGGAGCTGGCACTGAAA +
Preference number: 4 (lower is better)
Translates to: CRCVPGHGFTPMAGLLQPGPHRN*VELALK
Trigger: TTTCAGTGCCAGCTCCACTCAATTTCTATGTGGACC...AGGCTGCAGCAGGCCTGCCATGGGTGTGAACCCATGTCCAGGCACGCACCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGATGTGTGTCGGTGCGTaGCTGGACATGGGTTCACAC +
Preference number: 4 (lower is better)
Translates to: GSEAREQGSDPASAPFVLMCVGA*LDMGSH
Trigger: GTGTGAACCCATGTCCAGGCACGCACCGACACACAT...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCAATGTGTGTCGGTGCGTaGCTGGACATGGGTTCACAC +
Preference number: 4 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSMCVGA*LDMGSH
Trigger: GTGTGAACCCATGTCCAGGCACGCACCGACACACAT...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AGTGAGGGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTCTGGGCTTCCTCGGCTaGAGGCATGCCAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: SEGSEAREQGSDPASAPFLGFLG*RHARQN
Trigger: ATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAG...AAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTTTCTGCCTGACTGCCTaGCCCTCATCTAGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: CSLSLQTLHPGYRILQSSFCLTA*PSSRPY
Trigger: GTAGGGCCTAGATGAGGGGCAGGCAGTCAGGCAGAA...ACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CAGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTGCTTCTGCCTGACTGCCTaGCCCTCATCTAGGCCCTAC +
Preference number: 4 (lower is better)
Translates to: QDPLGSIKRGACVHVCRCFCLTA*PSSRPY
Trigger: GTAGGGCCTAGATGAGGGGCAGGCAGTCAGGCAGAA...GCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AGTGAGGGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTAACCCGATACAGTGCTaGTGCCAGGCTTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SEGSEAREQGSDPASAPFNPIQC*CQASRD
Trigger: GTCCCTGGAAGCCTGGCAGCAGCACTGTATCGGGTT...AAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GAAAAGGACTCCCAGGATGCTAGGATGCTGCACCCAGGGTTCAGGACTCCTCAGGGCACTGAAAGGGCCTaGTTTTCTCCACCCGCACAC +
Preference number: 4 (lower is better)
Translates to: EKDSQDARMLHPGFRTPQGTERA*FSPPAH
Trigger: GTGTGCGGGTGGAGAAAAGCAGGCCCTTTCAGTGCC...CTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTGTGTTCGTGAAGTCCCCAGCGTaGATCAGCACGTCGCCGTAC +
Preference number: 4 (lower is better)
Translates to: LSLQTLHPGYRILQSSVFVKSPA*ISTSPY
Trigger: GTACGGCGACGTGCTGATCCACGCTGGGGACTTCAC...GAACACACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCGTCCAGGAAGCCCAGTaGTGGTCCATGGGTTATCAG +
Preference number: 4 (lower is better)
Translates to: RPENKGQILPRLLLCCEPVQEAQ*WSMGYQ
Trigger: CTGATAACCCATGGACCACCACTGGGCTTCCTGGAC...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AAAGTAAATGAGCACAGAACCCCTGATGGGGATGCGCAGGGTCCCAACTCCAGGCCCGCTGCATCTTCTTaGGGACCCAGTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KVNEHRTPDGDAQGPNSRPAASS*GPSPGS
Trigger: GCTTCCTGGACTGGGTCCCCAAGAAGATGCAGCGGG...CCTGGAGTTGGGACCCTGCGCATCCCCATCAGGGGTTCTGTGCTCATTTACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTTACCCTTCGTGGATGTaGCCAAAGACATGTAACCGC +
Preference number: 4 (lower is better)
Translates to: AGLLQPKPADPPSRLPHSYPSWM*PKTCNR
Trigger: GCGGTTACATGTCTTTGGCCACATCCACGAAGGGTA...AGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp CTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTGTGTTCTGCCCAGCCACTCGTTaGACTTCTTCACCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: LSLQTLHPGYRILQSSVFCPATR*TSSPRS
Trigger: CGAGCGAGGTGAAGAAGTTCAACGAGTGGCTGGGCA...GAACACACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCCTACGCCTTCGGGAATaGGGTTCCATTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RPENKGQILPRLLLCCEPLRLRE*GSISPA
Trigger: TGCTGGAGAAATGGAACCTCATTCCCGAAGGCGTAG...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTCTACGCCTTCGGGAATaGGGTTCCATTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CSLSLQTLHPGYRILQSSLRLRE*GSISPA
Trigger: TGCTGGAGAAATGGAACCTCATTCCCGAAGGCGTAG...ACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGTGCGGTCTGAATTCCTaGGATGTCCCTAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: WASSAAGMPDRILTVQGKCGLNS*DVPKCS
Trigger: GGAGCATTTAGGGACATCTCAGGAATTCAGACCGCA...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TTCACACCCATGGCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCAAGTTATGCCAAAATaGTTGAGAAGCACGCCGTCA +
Preference number: 4 (lower is better)
Translates to: FTPMAGLLQPKPADPPSRQVMPK*LRSTPS
Trigger: TGACGGCGTGCTTCTCAATCATTTTGGCATAACTTG...CCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGGAAGGTAGATGCAGTTaGTCAGCAGCGACTGCACAT +
Preference number: 4 (lower is better)
Translates to: GSEAREQGSDPASAPFVLEGRCS*SAATAH
Trigger: ATGTGCAGTCGCTGCTGACCAACTGCATCTACCTTC...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CAGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTGCCGCCACACAGACCCGTaGTTAGAGGGAGATTTTGTG +
Preference number: 4 (lower is better)
Translates to: QDPLGSIKRGACVHVCRCRHTDP*LEGDFV
Trigger: CACAAAATCTCCCTCTAACCACGGGTCTGTGTGGCG...GCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp TGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTGTTACCACACCCCTCTaGCCTCAATCGTCTCATCTC +
Preference number: 4 (lower is better)
Translates to: CSLSLQTLHPGYRILQSSVTTPL*PQSSHL
Trigger: GAGATGAGACGATTGAGGCCAGAGGGGTGTGGTAAC...ACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACCTCAGTCATTTCCCAAACATaGCAGGGCCATGAGCTTAGT +
Preference number: 4 (lower is better)
Translates to: CFSPPAHMSCAWGIRETSVISQT*QGHELS
Trigger: ACTAAGCTCATGGCCCTGTCATGTTTGGGAAATGAC...TGAGGTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGGTCATTTCCCAAACATaGCAGGGCCATGAGCTTAGT +
Preference number: 4 (lower is better)
Translates to: GSEAREQGSDPASAPFVLVISQT*QGHELS
Trigger: ACTAAGCTCATGGCCCTGTCATGTTTGGGAAATGAC...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATACATCTGAGGATGAAATaGGTCTATATCTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: TGFLEPCTPRRSASANPIHLRMK*VYICKR
Trigger: CCTTTTGCAGATATAGACTCATTTCATCCTCAGATG...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGGGTCCACATAGAAATTaGGTGGAGCTGGCACTGAAA +
Preference number: 4 (lower is better)
Translates to: GSEAREQGSDPASAPFVLGPHRN*VELALK
Trigger: TTTCAGTGCCAGCTCCACTCAATTTCTATGTGGACC...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACTTATGCCAAAATGATTaGGAAGCACGCCGTCATCTT +
Preference number: 4 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDLCQND*EARRHL
Trigger: AAGATGACGGCGTGCTTCTCAATCATTTTGGCATAA...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp GCAGGCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTTTATGCCAAAATGATTaGGAAGCACGCCGTCATCTT +
Preference number: 4 (lower is better)
Translates to: AGLLQPKPADPPSRLPHSLCQND*EARRHL
Trigger: AAGATGACGGCGTGCTTCTCAATCATTTTGGCATAA...AGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGGCTGGTAGTTCACAGTaGATACGGACGCATTCACAT +
Preference number: 4 (lower is better)
Translates to: WASSAAGMPDRILTVQGKAGSSQ*IRTHSH
Trigger: ATGTGAATGCGTCCGTATGCACTGTGAACTACCAGC...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CAGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTGCGAAGGTAGATGCAGTTaGTCAGCAGCGACTGCACAT +
Preference number: 4 (lower is better)
Translates to: QDPLGSIKRGACVHVCRCEGRCS*SAATAH
Trigger: ATGTGCAGTCGCTGCTGACCAACTGCATCTACCTTC...GCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CAGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTGCTACCCTTCGTGGATGTaGCCAAAGACATGTAACCGC +
Preference number: 4 (lower is better)
Translates to: QDPLGSIKRGACVHVCRCYPSWM*PKTCNR
Trigger: GCGGTTACATGTCTTTGGCCACATCCACGAAGGGTA...GCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp AAAGTAAATGAGCACAGAACCCCTGATGGGGATGCGCAGGGTCCCAACTCCAGGTGCGGTCTGAATTCCTaGGATGTCCCTAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: KVNEHRTPDGDAQGPNSRCGLNS*DVPKCS
Trigger: GGAGCATTTAGGGACATCTCAGGAATTCAGACCGCA...CCTGGAGTTGGGACCCTGCGCATCCCCATCAGGGGTTCTGTGCTCATTTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGCAAGTTATGCCAAAATaGTTGAGAAGCACGCCGTCA +
Preference number: 4 (lower is better)
Translates to: WASSAAGMPDRILTVQGKQVMPK*LRSTPS
Trigger: TGACGGCGTGCTTCTCAATCATTTTGGCATAACTTG...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GAAAAGGACTCCCAGGATGCTAGGATGCTGCACCCAGGGTTCAGGACTCCTCAGACACCATACCCTTCGTaGATGTGGCCAAAGACATGT +
Preference number: 4 (lower is better)
Translates to: EKDSQDARMLHPGFRTPQTPYPS*MWPKTC
Trigger: ACATGTCTTTGGCCACATCCACGAAGGGTATGGTGT...CTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AGTGAATGCCTAGGACACTCAGGTCATTGTTCAAGTAAACAAAAATGCCTATGGCCCAACCCAGGGGCATaGCGCCACACAGACCCGTGG +
Preference number: 4 (lower is better)
Translates to: SECLGHSGHCSSKQKCLWPNPGA*RHTDPW
Trigger: CCACGGGTCTGTGTGGCGGCATGCCCCTGGGTTGGG...CCATAGGCATTTTTGTTTACTTGAACAATGACCTGAGTGTCCTAGGCATTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGTGAATGCCTAGGACACTCAGGTCATTGTTCAAGTAAACAAAAATGCCTATGGATGAGCCGGCTGTGCTaGTGCCGCCGAGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: SECLGHSGHCSSKQKCLWMSRLC*CRRAAI
Trigger: GATGGCCGCTCGGCGGCACCAGCACAGCCGGCTCAT...CCATAGGCATTTTTGTTTACTTGAACAATGACCTGAGTGTCCTAGGCATTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp TATATCTGCAAAAGGGCTCACGGTAGGCTGGTTCCCAGGGCTGGGACCTGGGTGCATCTGAGGATGAAATaGGTCTATATCTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: YICKRAHGRLVPRAGTWVHLRMK*VYICKR
Trigger: CCTTTTGCAGATATAGACTCATTTCATCCTCAGATG...CACCCAGGTCCCAGCCCTGGGAACCAGCCTACCGTGAGCCCTTTTGCAGATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCAGCTCACACCAGTTTTaGACAGGACCCTTAAAAATA +
Preference number: 4 (lower is better)
Translates to: RPENKGQILPRLLLCCEPSSHQF*TGPLKI
Trigger: TATTTTTAAGGGTCCTGTTCAAAACTGGTGTGAGCT...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GAGAAGCACGCCGTCATCTTCATACCTCGAGGACTTTTAATGAATTTTCTCTTACCAGGCAAACAGCTGTaGGCCTGGCCAGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: EKHAVIFIPRGLLMNFLLPGKQL*AWPGAV
Trigger: GACCGCACCTGGCCAGGCCCACAGCTGTTTGCCTGG...TAAGAGAAAATTCATTAAAAGTCCTCGAGGTATGAAGATGACGGCGTGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp CAGGACCCACTTGGTTCAATTAAGAGGGGTGCGTGCGTGCATGTGTGTCGGTGCAGCTCACACCAGTTTTaGACAGGACCCTTAAAAATA +
Preference number: 4 (lower is better)
Translates to: QDPLGSIKRGACVHVCRCSSHQF*TGPLKI
Trigger: TATTTTTAAGGGTCCTGTTCAAAACTGGTGTGAGCT...GCACCGACACACATGCACGCACGCACCCCTCTTAATTGAACCAAGTGGGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AGTGAATGCCTAGGACACTCAGGTCATTGTTCAAGTAAACAAAAATGCCTATGGCCATGGCAGGCCTGCTaGAGCCTAAGCCTGCAGACC +
Preference number: 4 (lower is better)
Translates to: SECLGHSGHCSSKQKCLWPWQAC*SLSLQT
Trigger: GGTCTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGG...CCATAGGCATTTTTGTTTACTTGAACAATGACCTGAGTGTCCTAGGCATTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp AGTGAATGCCTAGGACACTCAGGTCATTGTTCAAGTAAACAAAAATGCCTATGGCACCCATGGCAGGCCTaGTGCAGCCTAAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SECLGHSGHCSSKQKCLWHPWQA*CSLSLQ
Trigger: CTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTG...CCATAGGCATTTTTGTTTACTTGAACAATGACCTGAGTGTCCTAGGCATTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GAGAAGCACGCCGTCATCTTCATACCTCGAGGACTTTTAATGAATTTTCTCTTATCGCCGTACGGCATCTaGATGGGGTCCGTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: EKHAVIFIPRGLLMNFLLSPYGI*MGSVLE
Trigger: CTCGAGGACGGACCCCATCCAGATGCCGTACGGCGA...TAAGAGAAAATTCATTAAAAGTCCTCGAGGTATGAAGATGACGGCGTGCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGTGAATGCCTAGGACACTCAGGTCATTGTTCAAGTAAACAAAAATGCCTATGGGCAGTGTGTTCCCCGTaGGACCAAGGGTCATCCCCC +
Preference number: 4 (lower is better)
Translates to: SECLGHSGHCSSKQKCLWAVCSP*DQGSSP
Trigger: GGGGGATGACCCTTGGTCCCACGGGGAACACACTGC...CCATAGGCATTTTTGTTTACTTGAACAATGACCTGAGTGTCCTAGGCATTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GAGAAGCACGCCGTCATCTTCATACCTCGAGGACTTTTAATGAATTTTCTCTTACCTCGGCTCCTTTTGTaGTGTGAGCCCCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: EKHAVIFIPRGLLMNFLLPRLLL*CEPPGK
Trigger: CTTGCCTGGGGGCTCACAGCACAAAAGGAGCCGAGG...TAAGAGAAAATTCATTAAAAGTCCTCGAGGTATGAAGATGACGGCGTGCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGTGAATGCCTAGGACACTCAGGTCATTGTTCAAGTAAACAAAAATGCCTATGGCGAGCGGCCATCACGTaGGACTGGGAGAATGCCATG +
Preference number: 4 (lower is better)
Translates to: SECLGHSGHCSSKQKCLWRAAIT*DWENAM
Trigger: CATGGCATTCTCCCAGTCCCACGTGATGGCCGCTCG...CCATAGGCATTTTTGTTTACTTGAACAATGACCTGAGTGTCCTAGGCATTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GAGAAGCACGCCGTCATCTTCATACCTCGAGGACTTTTAATGAATTTTCTCTTATGGGAACGCTCTCACTaGTCCTGGGCACGAATGCCA +
Preference number: 4 (lower is better)
Translates to: EKHAVIFIPRGLLMNFLLWERSH*SWARMP
Trigger: TGGCATTCGTGCCCAGGACCAGTGAGAGCGTTCCCA...TAAGAGAAAATTCATTAAAAGTCCTCGAGGTATGAAGATGACGGCGTGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp GAGAAGCACGCCGTCATCTTCATACCTCGAGGACTTTTAATGAATTTTCTCTTAGAGCCCAGCTCAGTGTaGGCAGAAAAGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: EKHAVIFIPRGLLMNFLLEPSSV*AEKDSQ
Trigger: CTGGGAGTCCTTTTCTGCCCACACTGAGCTGGGCTC...TAAGAGAAAATTCATTAAAAGTCCTCGAGGTATGAAGATGACGGCGTGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp AGTGAATGCCTAGGACACTCAGGTCATTGTTCAAGTAAACAAAAATGCCTATGGTCGTCCCATCTGCCATaGCACCATACCCTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: SECLGHSGHCSSKQKCLWSSHLP*HHTLRG
Trigger: TCCACGAAGGGTATGGTGTCATGGCAGATGGGACGA...CCATAGGCATTTTTGTTTACTTGAACAATGACCTGAGTGTCCTAGGCATTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATACACCCATGGCAGGCCTaGTGCAGCCTAAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIHPWQA*CSLSLQ
Trigger: CTGCAGGCTTAGGCTGCAGCAGGCCTGCCATGGGTG...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATACCCGCACACATGTCCTaGGCCTGGGGCATCAGAGAG +
Preference number: 4 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIPAHMS*AWGIRE
Trigger: CTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGG...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATAACATGTAACCGCGGCTaGACGCGCCTCTGCACCGTG +
Preference number: 4 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFITCNRG*TRLCTV
Trigger: CACGGTGCAGAGGCGCGTCCAGCCGCGGTTACATGT...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR GCA 90 bp GAGAAGCACGCCGTCATCTTCATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGGGACTGTCTGTGTaGAGCTCACGAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: EKHAVIFIPRGLLMNFLLKGLSV*SSRILP
Trigger: TGGGAGGATTCGTGAGCTGCACACAGACAGTCCCTT...TAAGAGAAAATTCATTAAAAGTCCTCGAGGTATGAAGATGACGGCGTGCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATATGCACATGCGGTGGCTaGAAGCGGCCCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFICTCGG*KRPWLM
Trigger: CATCAACCAGGGCCGCTTCCAGCCACCGCATGTGCA...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CCA 90 bp AGTGAATGCCTAGGACACTCAGGTCATTGTTCAAGTAAACAAAAATGCCTATGGCAGGAAGCCCAGTGGTaGTCCATGGGTTATCAGGAT +
Preference number: 4 (lower is better)
Translates to: SECLGHSGHCSSKQKCLWQEAQW*SMGYQD
Trigger: ATCCTGATAACCCATGGACCACCACTGGGCTTCCTG...CCATAGGCATTTTTGTTTACTTGAACAATGACCTGAGTGTCCTAGGCATTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATATGCCCAGCCACTCGTTaGACTTCTTCACCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFICPATR*TSSPRS
Trigger: CGAGCGAGGTGAAGAAGTTCAACGAGTGGCTGGGCA...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR TCA 90 bp CATACCTCGAGGACTTTTAATGAATTTTCTCTTAAAGTAACAGCTGCCTTCATACATCCAGGCTCCGAGTaGATGCCTAGGACACTCAGG +
Preference number: 4 (lower is better)
Translates to: HTSRTFNEFSLKVTAAFIHPGSE*MPRTLR
Trigger: CCTGAGTGTCCTAGGCATTCACTCGGAGCCTGGATG...TATGAAGGCAGCTGTTACTTTAAGAGAAAATTCATTAAAAGTCCTCGAGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CAA 90 bp GCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGCTGGTCTGCCCAGCCACTCGTaGAACTTCTTCACCTCGCTC +
Preference number: 5 (lower is better)
Translates to: AWGPLGPCATLQFTGPAGLPSHS*NFFTSL
Trigger: GAGCGAGGTGAAGAAGTTCAACGAGTGGCTGGGCAG...ACCAGCCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CAA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTACTGCCTCGGCTCCTTTaGTGCTGTGAGCCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: RAGWSWASSAAGMPDRILLPRLL*CCEPPG
Trigger: GCCTGGGGGCTCACAGCACAAAAGGAGCCGAGGCAG...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS GCA 90 bp TTGGAGCTGTACTCGTCCACCTCGATGATGAGCCGGCTGTGCTGGTaGCGCCGAGCGGCCATCACGTGGGACTGGGAGAATGCCATGCCC +
Preference number: 5 (lower is better)
Translates to: LELYSSTSMMSRLCW*RRAAITWDWENAMP
Trigger: GGGCATGGCATTCTCCCAGTCCCACGTGATGGCCGCTCGGCGGCACCAGCACAGCCGGCTCATCATCGAGGTGGACGAGTACAGCTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
ENST00000447567.1
ENST00000480239.1
CDS GCA 90 bp CACTCGGGAGTCACAGGTCCCCAATCCCGGGCACAGCAGGTAGCCTaGAGCGGCCGGAGCCCCAACGGGATGGGTAAACAAGTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: HSGVTGPQSRAQQVA*SGRSPNGMGKQVRN
Trigger: GTTCCTGACTTGTTTACCCATCCCGTTGGGGCTCCGGCCGCTGCAGGCTACCTGCTGTGCCCGGGATTGGGGACCTGTGACTCCCGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417669.6
CDS GCA 90 bp ACACTGCAGGGCACTGGTCAGCCCCAACGCACCCACTGCTGCTCCTaGTCTGGGCCAGATCCTGTTCTGGGAGCCACAGGACCCAGACAC +
Preference number: 5 (lower is better)
Translates to: TLQGTGQPQRTHCCS*SGPDPVLGATGPRH
Trigger: GTGTCTGGGTCCTGTGGCTCCCAGAACAGGATCTGGCCCAGAGCAGGAGCAGCAGTGGGTGCGTTGGGGCTGACCAGTGCCCTGCAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 90 bp GGGTTGGAGCTGTACTCGTCCACCTCGATGATGAGCCGGCTGTGCTaGTGCCGCCGAGCGGCCATCACGTGGGACTGGGAGAATGCCATG +
Preference number: 5 (lower is better)
Translates to: GLELYSSTSMMSRLC*CRRAAITWDWENAM
Trigger: CATGGCATTCTCCCAGTCCCACGTGATGGCCGCTCGGCGGCACCAGCACAGCCGGCTCATCATCGAGGTGGACGAGTACAGCTCCAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
ENST00000447567.1
ENST00000480239.1
CDS CCA 90 bp GCAGGGCACTGGTCAGCCCCAACGCACCCACTGCTGCTCCTGCTCTaGGCCAGATCCTGTTCTGGGAGCCACAGGACCCAGACACGAAAC +
Preference number: 5 (lower is better)
Translates to: AGHWSAPTHPLLLLL*ARSCSGSHRTQTRN
Trigger: GTTTCGTGTCTGGGTCCTGTGGCTCCCAGAACAGGATCTGGCCCAGAGCAGGAGCAGCAGTGGGTGCGTTGGGGCTGACCAGTGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 90 bp CGTCCTCGAGTGGGTATCAGAGACGCAGACGAAGCGGGTGTAGCCTaGAGGTTTGGGGGCATCGTGAGGCACCGGGTCCACCATCTGCAC +
Preference number: 5 (lower is better)
Translates to: RPRVGIRDADEAGVA*RFGGIVRHRVHHLH
Trigger: GTGCAGATGGTGGACCCGGTGCCTCACGATGCCCCCAAACCTCCAGGCTACACCCGCTTCGTCTGCGTCTCTGATACCCACTCGAGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CAA 90 bp AGGGCCGGCTGGTCCTGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACCCGCTGCATCTTCTaGGGGACCCAGTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RAGWSWASSAAGMPDRILTRCIF*GTQSRK
Trigger: CTTCCTGGACTGGGTCCCCAAGAAGATGCAGCGGGT...TAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCAGGACCAGCCGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS TCA 90 bp ACCAGGGCTGCCATGGGGAGCCATAGATCCGGAAGCCCCGCACGGTaGCCTCCGAGTCCTGAAGGTAGATGCAGTTGGTCAGCAGCGACT +
Preference number: 5 (lower is better)
Translates to: TRAAMGSHRSGSPAR*PPSPEGRCSWSAAT
Trigger: AGTCGCTGCTGACCAACTGCATCTACCTTCAGGACTCGGAGGTCACCGTGCGGGGCTTCCGGATCTATGGCTCCCCATGGCAGCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS CCA 90 bp AGTGGGTATCAGAGACGCAGACGAAGCGGGTGTAGCCTGGAGGTTTaGGGGCATCGTGAGGCACCGGGTCCACCATCTGCACATGCGGTG +
Preference number: 5 (lower is better)
Translates to: SGYQRRRRSGCSLEV*GHREAPGPPSAHAV
Trigger: CACCGCATGTGCAGATGGTGGACCCGGTGCCTCACGATGCCCCCAAACCTCCAGGCTACACCCGCTTCGTCTGCGTCTCTGATACCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
CDS CCA 90 bp AGGCAAATTCTTCACCACCACCCCCATCTGGACACTGCAGGGCACTaGTCAGCCCCAACGCACCCACTGCTGCTCCTGCTCTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: RQILHHHPHLDTAGH*SAPTHPLLLLLWAR
Trigger: TCTGGCCCAGAGCAGGAGCAGCAGTGGGTGCGTTGGGGCTGACCAGTGCCCTGCAGTGTCCAGATGGGGGTGGTGGTGAAGAATTTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS-3UTR CAA 90 bp CTGGAGCCTGGGGCCCGCTCGGTCCCTGTGCCACCCTCCAATTCACAGGGCCGGAAACACAGGACCCACTaGGTTCAATTAAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: LEPGARSVPVPPSNSQGRKHRTH*VQLRGV
Trigger: CACCCCTCTTAATTGAACCAAGTGGGTCCTGTGTTT...CCGGCCCTGTGAATTGGAGGGTGGCACAGGGACCGAGCGGGCCCCAGGCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS CCA 90 bp TCAGTGAAGTCCCCAGCGTGGATCAGCACGTCGCCGTACGGCATCTaGATGGGGTCCGTCCTCGAGTGGGTATCAGAGACGCAGACGAAG +
Preference number: 5 (lower is better)
Translates to: SVKSPAWISTSPYGI*MGSVLEWVSETQTK
Trigger: CTTCGTCTGCGTCTCTGATACCCACTCGAGGACGGACCCCATCCAGATGCCGTACGGCGACGTGCTGATCCACGCTGGGGACTTCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CAA 90 bp AGTGAGGGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTCTGCCTCGGCTCCTTTaGTGCTGTGAGCCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SEGSEAREQGSDPASAPFLPRLL*CCEPPG
Trigger: GCCTGGGGGCTCACAGCACAAAAGGAGCCGAGGCAG...AAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCCCTCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS TCA 90 bp CCTGGCCCCTTCCTTCTCGCCCCACCGAGTAAGACTCTGAGGCTTTaGCTTCCCAGGGAGTTGTGGCTGGACACGTCCACTACAACCCAC +
Preference number: 5 (lower is better)
Translates to: PGPFLLAPPSKTLRL*LPRELWLDTSTTTH
Trigger: GTGGGTTGTAGTGGACGTGTCCAGCCACAACTCCCTGGGAAGTCAAAGCCTCAGAGTCTTACTCGGTGGGGCGAGAAGGAAGGGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS TCA 90 bp CCATGGTGCCTGGCCCCTTCCTTCTCGCCCCACCGAGTAAGACTCTaGGGCTTTGACTTCCCAGGGAGTTGTGGCTGGACACGTCCACTA +
Preference number: 5 (lower is better)
Translates to: PWCLAPSFSPHRVRL*GFDFPGSCGWTRPL
Trigger: TAGTGGACGTGTCCAGCCACAACTCCCTGGGAAGTCAAAGCCTCAGAGTCTTACTCGGTGGGGCGAGAAGGAAGGGGCCAGGCACCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 90 bp GCCTCTCAAACTCAGCGCAGGCCCAGGACAGCCCCAGTTCACATCTaGTGTCCCTGTGCCACTATTACCAGCATCCTCTCCGGCTCTCGA +
Preference number: 5 (lower is better)
Translates to: ASQTQRRPRTAPVHI*CPCATITSILSGSR
Trigger: TCGAGAGCCGGAGAGGATGCTGGTAATAGTGGCACAGGGACAGCAGATGTGAACTGGGGCTGTCCTGGGCCTGCGCTGAGTTTGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS-3UTR CAA 90 bp GGCAGTGAGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTTTCTCCAGCAGGGCTaGGCCTCGCGGGAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: GSEAREQGSDPASAPFVLFLQQG*ASREVE
Trigger: TTCAACCTCCCGCGAGGCCAAGCCCTGCTGGAGAAA...CAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCTCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS GCA 90 bp CTGGGCTGCTGGAGCACTGAAGGACACAGGAGATTCAAAAGCCCCTaGCAGGGCCTAGCACACAGGAGGTGCTCACTCCATGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LGCWSTEGHRRFKSP*QGLAHRRCSLHVSS
Trigger: GGAAGAGACATGGAGTGAGCACCTCCTGTGTGCTAGGCCCTGGCAGGGGCTTTTGAATCTCCTGTGTCCTTCAGTGCTCCAGCAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS-3UTR CAA 90 bp AGGCCAGAGAACAAGGGTCAGATCCTGCCTCGGCTCCTTTTGTGCTGTGAGCCCCTGCCCAGCCACTCGTaGAACTTCTTCACCTCGCTC +
Preference number: 5 (lower is better)
Translates to: RPENKGQILPRLLLCCEPLPSHS*NFFTSL
Trigger: GAGCGAGGTGAAGAAGTTCAACGAGTGGCTGGGCAG...GGGCTCACAGCACAAAAGGAGCCGAGGCAGGATCTGACCCTTGTTCTCTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS GCA 90 bp GCCAAAAGTGCAGCTGCCTGTCTTCAGGCCGGTGGCTCAGGGCGATaGAGAGAAAAAGCCGGCTTGGCTCAGCAAAGGCAGTGCTTACTA +
Preference number: 5 (lower is better)
Translates to: AKSAAACLQAGGSGR*REKAGLAQQRQCLL
Trigger: TAGTAAGCACTGCCTTTGCTGAGCCAAGCCGGCTTTTTCTCTGCATCGCCCTGAGCCACCGGCCTGAAGACAGGCAGCTGCACTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 90 bp GGAACCCCACCTTGGAAAGCTTTCACCAGGATCCTAGACGCACCTTaGCTCCGTCTCCTCTTGGGGCCTTTAACTGAGAGTAGGAGCGAC +
Preference number: 5 (lower is better)
Translates to: GTPPWKAFTRILDAP*LRLLLGPLTESRSD
Trigger: GTCGCTCCTACTCTCAGTTAAAGGCCCCAAGAGGAGACGGAGCCAAGGTGCGTCTAGGATCCTGGTGAAAGCTTTCCAAGGTGGGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS-3UTR CAA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACAAACACAGGACCCACTaGGTTCAATTAAGAGGGGTG +
Preference number: 5 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDKHRTH*VQLRGV
Trigger: CACCCCTCTTAATTGAACCAAGTGGGTCCTGTGTTT...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CAA 90 bp ACGGGATTCCTGGAGCCCTGCACCCCACGGCGCTCAGCTTCAGCCAACCCGATAGAGCTCACACCAGTTTaGAACAGGACCCTTAAAAAT +
Preference number: 5 (lower is better)
Translates to: TGFLEPCTPRRSASANPIELTPV*NRTLKN
Trigger: ATTTTTAAGGGTCCTGTTCAAAACTGGTGTGAGCTC...TATCGGGTTGGCTGAAGCTGAGCGCCGTGGGGTGCAGGGCTCCAGGAATCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS TCA 90 bp CTTCCCAGGGAGTTGTGGCTGGACACGTCCACTACAACCCACCCTTaGCACGTTTTTCTAGGCAAATTCTTCACCACCACCCCCATCTGG +
Preference number: 5 (lower is better)
Translates to: LPRELWLDTSTTTHP*HVFLGKFFTTTPIW
Trigger: CCAGATGGGGGTGGTGGTGAAGAATTTGCCTAGAAAAACGTGTCAAGGGTGGGTTGTAGTGGACGTGTCCAGCCACAACTCCCTGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS-3UTR CAA 90 bp TGGGCTTCCTCGGCTGCAGGCATGCCAGACAGAATCCTAACGGTGCAAGGGAAGGCCTTGGACCATGCATaGCTTTGTAGGGACATAACT +
Preference number: 5 (lower is better)
Translates to: WASSAAGMPDRILTVQGKALDHA*LCRDIT
Trigger: AGTTATGTCCCTACAAAGCAATGCATGGTCCAAGGC...CTTCCCTTGCACCGTTAGGATTCTGTCTGGCATGCCTGCAGCCGAGGAAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS TCA 90 bp AAACATGTGGATTCTCAATCCTTCCTTCCTGGGCTGCTGGAGCACTaGAGGACACAGGAGATTCAAAAGCCCCTGCCAGGGCCTAGCACA +
Preference number: 5 (lower is better)
Translates to: KHVDSQSFLPGLLEH*RTQEIQKPLPGPST
Trigger: TGTGCTAGGCCCTGGCAGGGGCTTTTGAATCTCCTGTGTCCTTCAGTGCTCCAGCAGCCCAGGAAGGAAGGATTGAGAATCCACATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 90 bp AAGTGCTCTCGTTTGGAAGGAAAAGGTCACTCTGATCAAAGCCAGTaGCAGGCCGGTAAGGCAGCCATCCCCAGAACACACCTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: KCSRLEGKGHSDQSQ*QAGKAAIPRTHLCF
Trigger: GAAACACAGGTGTGTTCTGGGGATGGCTGCCTTACCGGCCTGGCACTGGCTTTGATCAGAGTGACCTTTTCCTTCCAAACGAGAGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 90 bp CCACTATTACCAGCATCCTCTCCGGCTCTCGAAAGTGCTCTCGTTTaGAAGGAAAAGGTCACTCTGATCAAAGCCAGTGCCAGGCCGGTA +
Preference number: 5 (lower is better)
Translates to: PLLPASSPALESALV*KEKVTLIKASARPV
Trigger: TACCGGCCTGGCACTGGCTTTGATCAGAGTGACCTTTTCCTTCCAAACGAGAGCACTTTCGAGAGCCGGAGAGGATGCTGGTAATAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 90 bp TCACCTACAAACATGTGGATTCTCAATCCTTCCTTCCTGGGCTGCTaGAGCACTGAAGGACACAGGAGATTCAAAAGCCCCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SPTNMWILNPSFLGC*STEGHRRFKSPCQG
Trigger: GCCCTGGCAGGGGCTTTTGAATCTCCTGTGTCCTTCAGTGCTCCAGCAGCCCAGGAAGGAAGGATTGAGAATCCACATGTTTGTAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS-3UTR CAA 90 bp TGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGAGCAGTGCCTTGGACCATGCATaGCTTTGTAGGGACATAACT +
Preference number: 5 (lower is better)
Translates to: CSLSLQTLHPGYRILQSSALDHA*LCRDIT
Trigger: AGTTATGTCCCTACAAAGCAATGCATGGTCCAAGGC...ACTGCTCTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CAA 90 bp GGCCTGCTTTTCTCCACCCGCACACATGTCCTGCGCCTGGGGCATCAGAGAGACACAATAAAAAGAGCCTaGGACCATGCATTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: GLLFSTRTHVLRLGHQRDTIKRA*DHALLC
Trigger: ACAAAGCAATGCATGGTCCAAGGCTCTTTTTATTGT...GTCTCTCTGATGCCCCAGGCGCAGGACATGTGTGCGGGTGGAGAAAAGCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CAA 90 bp GCCTGCTGCAGCCTAAGCCTGCAGACCCTCCATCCAGGCTACCGCATTCTACAGGAGCTCACACCAGTTTaGAACAGGACCCTTAAAAAT +
Preference number: 5 (lower is better)
Translates to: ACCSLSLQTLHPGYRILQELTPV*NRTLKN
Trigger: ATTTTTAAGGGTCCTGTTCAAAACTGGTGTGAGCTC...CTGTAGAATGCGGTAGCCTGGATGGAGGGTCTGCAGGCTTAGGCTGCAGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS GCA 90 bp TGTCCCTGTGCCACTATTACCAGCATCCTCTCCGGCTCTCGAAAGTaGTCTCGTTTGGAAGGAAAAGGTCACTCTGATCAAAGCCAGTGC +
Preference number: 5 (lower is better)
Translates to: CPCATITSILSGSRK*SRLEGKGHSDQSQC
Trigger: GCACTGGCTTTGATCAGAGTGACCTTTTCCTTCCAAACGAGAGCACTTTCGAGAGCCGGAGAGGATGCTGGTAATAGTGGCACAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 90 bp AGAGGCCTTGGCTCACACAGAGCATCTCAGCAGCAGATGAATGTTTaGAAAAGAGATGCTTGGATCATTCTGGTGGCCCCTCTCTGTCCG +
Preference number: 5 (lower is better)
Translates to: RGLGSHRASQQQMNV*KRDAWIILVAPLCP
Trigger: CGGACAGAGAGGGGCCACCAGAATGATCCAAGCATCTCTTTTGCAAACATTCATCTGCTGCTGAGATGCTCTGTGTGAGCCAAGGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS TCA 90 bp GGAGCTGCTGCCCTGCAGACCAAAGATAGATTTTGCTTCACCGTGTaGCTTGAAGCATCACTTCCAGCCAACACAGGCCTCTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: GAAALQTKDRFCFTV*LEASLPANTGLSNS
Trigger: TGAGTTTGAGAGGCCTGTGTTGGCTGGAAGTGATGCTTCAAGTCACACGGTGAAGCAAAATCTATCTTTGGTCTGCAGGGCAGCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS TCA 90 bp AGAGAGAGAGAGGCCTTGGCTCACACAGAGCATCTCAGCAGCAGATaGATGTTTGCAAAAGAGATGCTTGGATCATTCTGGTGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: REREALAHTEHLSSR*MFAKEMLGSFWWPL
Trigger: GAGGGGCCACCAGAATGATCCAAGCATCTCTTTTGCAAACATTCATCTGCTGCTGAGATGCTCTGTGTGAGCCAAGGCCTCTCTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 90 bp GCTCGCCGGGCTTGTCTTCAAATTCTGAATATTCTCCATTCCCATTaGACAGAACGAGCCCCGAGACGCAAAGAAACACACAAAGCTCGG +
Preference number: 5 (lower is better)
Translates to: ARRACLQILNILHSH*TERAPRRKETHKAR
Trigger: CCGAGCTTTGTGTGTTTCTTTGCGTCTCGGGGCTCGTTCTGTGCAATGGGAATGGAGAATATTCAGAATTTGAAGACAAGCCCGGCGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000447567.1
ENST00000465861.1
ENST00000480239.1
CDS GCA 90 bp TCAGGGCGATGCAGAGAAAAAGCCGGCTTGGCTCAGCAAAGGCAGTaGTTACTAGGGCTTTTGTTGCAATGTGGCGAAATGTCACAGAGA +
Preference number: 5 (lower is better)
Translates to: SGRCREKAGLAQQRQ*LLGLLLQCGEMSQR
Trigger: TCTCTGTGACATTTCGCCACATTGCAACAAAAGCCCTAGTAAGCACTGCCTTTGCTGAGCCAAGCCGGCTTTTTCTCTGCATCGCCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS TCA 90 bp TTTAGCTATGAATGCAGTCGGCTCGCCGGGCTTGTCTTCAAATTCTaGATATTCTCCATTCCCATTGCACAGAACGAGCCCCGAGACGCA +
Preference number: 5 (lower is better)
Translates to: FSYECSRLAGLVFKF*IFSIPIAQNEPRDA
Trigger: TGCGTCTCGGGGCTCGTTCTGTGCAATGGGAATGGAGAATATTCAGAATTTGAAGACAAGCCCGGCGAGCCGACTGCATTCATAGCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000447567.1
ENST00000465861.1
ENST00000480239.1
CDS CCA 90 bp CGACTGCACATTCTCATAGTTCTCCGGCTTCAGCTTCGACACAGATaGGAAGTAGTAAAAGTCCTGCTTGATGAGGTCGGCCATGAACTC +
Preference number: 5 (lower is better)
Translates to: RLHILIVLRLQLRHR*EVVKVLLDEVGHEL
Trigger: GAGTTCATGGCCGACCTCATCAAGCAGGACTTTTACTACTTCCCATCTGTGTCGAAGCTGAAGCCGGAGAACTATGAGAATGTGCAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CAA 90 bp GAAAAGGACTCCCAGGATGCTAGGATGCTGCACCCAGGGTTCAGGACTCCTCAGACAATAAAAAGAGCCTaGGACCATGCATTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: EKDSQDARMLHPGFRTPQTIKRA*DHALLC
Trigger: ACAAAGCAATGCATGGTCCAAGGCTCTTTTTATTGT...CTGAGGAGTCCTGAACCCTGGGTGCAGCATCCTAGCATCCTGGGAGTCCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS-3UTR CAA 90 bp GAGAAGCACGCCGTCATCTTCATACCTCGAGGACTTTTAATGAATTTTCTCTTATTTCTCCAGCAGGGCTaGGCCTCGCGGGAGGTTGAA +
Preference number: 5 (lower is better)
Translates to: EKHAVIFIPRGLLMNFLLFLQQG*ASREVE
Trigger: TTCAACCTCCCGCGAGGCCAAGCCCTGCTGGAGAAA...TAAGAGAAAATTCATTAAAAGTCCTCGAGGTATGAAGATGACGGCGTGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS TCA 90 bp CATAATATGGTGCTGTCCTGGGTCCAAAACTCGGATGACAGTCAATaGGCACACAGAAACGACTGTCTTATTAAGCATGAGAAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: HNMVLSWVQNSDDSQ*AHRNDCLIKHEKLP
Trigger: TGGAAGCTTCTCATGCTTAATAAGACAGTCGTTTCTGTGTGCTCATTGACTGTCATCCGAGTTTTGGACCCAGGACAGCACCATATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 90 bp CAGACCTGGAAACAGATGGATCATGTCCTGTCTGCCACAAATAGCTaGTCACTTATTCCTTTAATTTTAGCTATGAATGCAGTCGGCTCG +
Preference number: 5 (lower is better)
Translates to: QTWKQMDHVLSATNS*SLIPLILAMNAVGS
Trigger: CGAGCCGACTGCATTCATAGCTAAAATTAAAGGAATAAGTGAGCAGCTATTTGTGGCAGACAGGACATGATCCATCTGTTTCCAGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447567.1
ENST00000480239.1
CDS CCA 90 bp TTCAAAATAAAGCACTTGGAGAGTCACGTATCTATGGAGTTGAAATaGGAAGCTGTTCAGATCTGTTTCAAACATGCACACAGACATATC +
Preference number: 5 (lower is better)
Translates to: FKIKHLESHVSMELK*EAVQICFKHAHRHI
Trigger: GATATGTCTGTGTGCATGTTTGAAACAGATCTGAACAGCTTCCCATTTCAACTCCATAGATACGTGACTCTCCAAGTGCTTTATTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 72 bp AGCCGGCTGTGCTGGTGCCGCCGAGCGGCCATCACGTaGGACTGGGAGAATGCCATGCCCAGGCCGCAGGGG +
Preference number: 6 (lower is better)
Translates to: SRLCWCRRAAIT*DWENAMPRPQG
Trigger: CCCCTGCGGCCTGGGCATGGCATTCTCCCAGTCCCACGTGATGGCCGCTCGGCGGCACCAGCACAGCCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
ENST00000447567.1
ENST00000480239.1
CDS GCA 72 bp GAGCTGTACTCGTCCACCTCGATGATGAGCCGGCTGTaGTGGTGCCGCCGAGCGGCCATCACGTGGGACTGG +
Preference number: 6 (lower is better)
Translates to: ELYSSTSMMSRL*WCRRAAITWDW
Trigger: CCAGTCCCACGTGATGGCCGCTCGGCGGCACCAGCACAGCCGGCTCATCATCGAGGTGGACGAGTACAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
ENST00000447567.1
ENST00000480239.1
CDS GCA 72 bp CTGCAGGGCACTGGTCAGCCCCAACGCACCCACTGCTaGTCCTGCTCTGGGCCAGATCCTGTTCTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: LQGTGQPQRTHC*SCSGPDPVLGA
Trigger: GGCTCCCAGAACAGGATCTGGCCCAGAGCAGGAGCAGCAGTGGGTGCGTTGGGGCTGACCAGTGCCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 72 bp CTGTACTCGTCCACCTCGATGATGAGCCGGCTGTGCTaGTGCCGCCGAGCGGCCATCACGTGGGACTGGGAG +
Preference number: 6 (lower is better)
Translates to: LYSSTSMMSRLC*CRRAAITWDWE
Trigger: CTCCCAGTCCCACGTGATGGCCGCTCGGCGGCACCAGCACAGCCGGCTCATCATCGAGGTGGACGAGTACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
ENST00000447567.1
ENST00000480239.1
CDS TCA 72 bp TCCATTTCTCCAGCAGGGCTTGGCCTCGCGGGAGGTTaGAGCCCCAGCCGTAGAACCAGGGCTGCCATGGGG +
Preference number: 6 (lower is better)
Translates to: SISPAGLGLAGG*SPSRRTRAAMG
Trigger: CCCCATGGCAGCCCTGGTTCTACGGCTGGGGCTTCAACCTCCCGCGAGGCCAAGCCCTGCTGGAGAAATGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS GCA 72 bp GTCACAGGTCCCCAATCCCGGGCACAGCAGGTAGCCTaGAGCGGCCGGAGCCCCAACGGGATGGGTAAACAA +
Preference number: 6 (lower is better)
Translates to: VTGPQSRAQQVA*SGRSPNGMGKQ
Trigger: TTGTTTACCCATCCCGTTGGGGCTCCGGCCGCTGCAGGCTACCTGCTGTGCCCGGGATTGGGGACCTGTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417669.6
CDS GCA 72 bp TACTCGTCCACCTCGATGATGAGCCGGCTGTGCTGGTaGCGCCGAGCGGCCATCACGTGGGACTGGGAGAAT +
Preference number: 6 (lower is better)
Translates to: YSSTSMMSRLCW*RRAAITWDWEN
Trigger: ATTCTCCCAGTCCCACGTGATGGCCGCTCGGCGGCACCAGCACAGCCGGCTCATCATCGAGGTGGACGAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
ENST00000447567.1
ENST00000480239.1
CDS CCA 72 bp CAGAGACGCAGACGAAGCGGGTGTAGCCTGGAGGTTTaGGGGCATCGTGAGGCACCGGGTCCACCATCTGCA +
Preference number: 6 (lower is better)
Translates to: QRRRRSGCSLEV*GHREAPGPPSA
Trigger: TGCAGATGGTGGACCCGGTGCCTCACGATGCCCCCAAACCTCCAGGCTACACCCGCTTCGTCTGCGTCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
CDS CCA 72 bp GTGGGTATCAGAGACGCAGACGAAGCGGGTGTAGCCTaGAGGTTTGGGGGCATCGTGAGGCACCGGGTCCAC +
Preference number: 6 (lower is better)
Translates to: VGIRDADEAGVA*RFGGIVRHRVH
Trigger: GTGGACCCGGTGCCTCACGATGCCCCCAAACCTCCAGGCTACACCCGCTTCGTCTGCGTCTCTGATACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
CDS CCA 72 bp TCCCCAGCGTGGATCAGCACGTCGCCGTACGGCATCTaGATGGGGTCCGTCCTCGAGTGGGTATCAGAGACG +
Preference number: 6 (lower is better)
Translates to: SPAWISTSPYGI*MGSVLEWVSET
Trigger: CGTCTCTGATACCCACTCGAGGACGGACCCCATCCAGATGCCGTACGGCGACGTGCTGATCCACGCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334209.9
ENST00000417669.6
ENST00000443721.2
CDS TCA 72 bp GGAGCAGTCAGGAGTTCCGGGGTGTGGGGAGGTCGATaGCTATGGGCGGGTTCACGGGCTGGTAGTTCACAG +
Preference number: 6 (lower is better)
Translates to: GAVRSSGVWGGR*LWAGSRAGSSQ
Trigger: CTGTGAACTACCAGCCCGTGAACCCGCCCATAGTCATCGACCTCCCCACACCCCGGAACTCCTGACTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS GCA 72 bp GCAGCTGCCTGTCTTCAGGCCGGTGGCTCAGGGCGATaGAGAGAAAAAGCCGGCTTGGCTCAGCAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: AAACLQAGGSGR*REKAGLAQQRQ
Trigger: CTGCCTTTGCTGAGCCAAGCCGGCTTTTTCTCTGCATCGCCCTGAGCCACCGGCCTGAAGACAGGCAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 72 bp CCAGCTCCCAGTCTGAATAGGTCGGGGTCCTCCTCCTaGGCCACCATCTCTTCCACTCGGGAGTCACAGGTC +
Preference number: 6 (lower is better)
Translates to: PAPSLNRSGSSS*ATISSTRESQV
Trigger: GACCTGTGACTCCCGAGTGGAAGAGATGGTGGCCCAGGAGGAGGACCCCGACCTATTCAGACTGGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417669.6
CDS TCA 72 bp GCCATGGGGAGCCATAGATCCGGAAGCCCCGCACGGTaGCCTCCGAGTCCTGAAGGTAGATGCAGTTGGTCA +
Preference number: 6 (lower is better)
Translates to: AMGSHRSGSPAR*PPSPEGRCSWS
Trigger: TGACCAACTGCATCTACCTTCAGGACTCGGAGGTCACCGTGCGGGGCTTCCGGATCTATGGCTCCCCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS CCA 72 bp CCTTCGTGGATGTGGCCAAAGACATGTAACCGCGGCTaGACGCGCCTCTGCACCGTGTTGAGCAGCTCCACA +
Preference number: 6 (lower is better)
Translates to: PSWMWPKTCNRG*TRLCTVLSSST
Trigger: TGTGGAGCTGCTCAACACGGTGCAGAGGCGCGTCCAGCCGCGGTTACATGTCTTTGGCCACATCCACGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS TCA 72 bp CTGGCCCCTTCCTTCTCGCCCCACCGAGTAAGACTCTaGGGCTTTGACTTCCCAGGGAGTTGTGGCTGGACA +
Preference number: 6 (lower is better)
Translates to: LAPSFSPHRVRL*GFDFPGSCGWT
Trigger: TGTCCAGCCACAACTCCCTGGGAAGTCAAAGCCTCAGAGTCTTACTCGGTGGGGCGAGAAGGAAGGGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 72 bp AGCCATCCCCGCTGCGGCGTTCTGAGGAACCCCACCTaGGAAAGCTTTCACCAGGATCCTAGACGCACCTTG +
Preference number: 6 (lower is better)
Translates to: SHPRCGVLRNPT*ESFHQDPRRTL
Trigger: CAAGGTGCGTCTAGGATCCTGGTGAAAGCTTTCCAAGGTGGGGTTCCTCAGAACGCCGCAGCGGGGATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 72 bp TTGGGGACCCAGTCCAGGAAGCCCAGTGGTGGTCCATaGGTTATCAGGATGTCTACGCCTTCGGGAATGAGG +
Preference number: 6 (lower is better)
Translates to: LGTQSRKPSGGP*VIRMSTPSGMR
Trigger: CCTCATTCCCGAAGGCGTAGACATCCTGATAACCCATGGACCACCACTGGGCTTCCTGGACTGGGTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS CAA 72 bp GCCGGTGGCTCAGGGCGATGCAGAGAAAAAGCCGGCTaGGCTCAGCAAAGGCAGTGCTTACTAGGGCTTTTG +
Preference number: 6 (lower is better)
Translates to: AGGSGRCREKAG*AQQRQCLLGLL
Trigger: CAAAAGCCCTAGTAAGCACTGCCTTTGCTGAGCCAAGCCGGCTTTTTCTCTGCATCGCCCTGAGCCACCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS TCA 72 bp GTCCATGGGTTATCAGGATGTCTACGCCTTCGGGAATaGGGTTCCATTTCTCCAGCAGGGCTTGGCCTCGCG +
Preference number: 6 (lower is better)
Translates to: VHGLSGCLRLRE*GSISPAGLGLA
Trigger: CGCGAGGCCAAGCCCTGCTGGAGAAATGGAACCTCATTCCCGAAGGCGTAGACATCCTGATAACCCATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS TCA 72 bp TTCCTTCTCGCCCCACCGAGTAAGACTCTGAGGCTTTaGCTTCCCAGGGAGTTGTGGCTGGACACGTCCACT +
Preference number: 6 (lower is better)
Translates to: FLLAPPSKTLRL*LPRELWLDTST
Trigger: AGTGGACGTGTCCAGCCACAACTCCCTGGGAAGTCAAAGCCTCAGAGTCTTACTCGGTGGGGCGAGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 72 bp TGGAGCACTGAAGGACACAGGAGATTCAAAAGCCCCTaGCAGGGCCTAGCACACAGGAGGTGCTCACTCCAT +
Preference number: 6 (lower is better)
Translates to: WSTEGHRRFKSP*QGLAHRRCSLH
Trigger: ATGGAGTGAGCACCTCCTGTGTGCTAGGCCCTGGCAGGGGCTTTTGAATCTCCTGTGTCCTTCAGTGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 72 bp TGGCCCCTCTCTGTCCGAAGATGTGTGAGGAAGATCTaGGAGGATTGCACTACCAGAGGAGCTGCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: WPLSVRRCVRKI*EDCTTRGAAAL
Trigger: CAGGGCAGCAGCTCCTCTGGTAGTGCAATCCTCCAAGATCTTCCTCACACATCTTCGGACAGAGAGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 90 bp TGTCTTCAGGCCGGTGGCTCAGGGCGATGCAGAGAAAAAGCCGGCTaGGCTCAGCAAAGGCAGTGCTTACTAGGGCTTTTGTTGCAATGT +
Preference number: 6 (lower is better)
Translates to: CLQAGGSGRCREKAG*AQQRQCLLGLLLQC
Trigger: ACATTGCAACAAAAGCCCTAGTAAGCACTGCCTTTGCTGAGCCAAGCCGGCTTTTTCTCTGCATCGCCCTGAGCCACCGGCCTGAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 90 bp GCCACTATTACCAGCATCCTCTCCGGCTCTCGAAAGTGCTCTCGTTaGGAAGGAAAAGGTCACTCTGATCAAAGCCAGTGCCAGGCCGGT +
Preference number: 6 (lower is better)
Translates to: ATITSILSGSRKCSR*EGKGHSDQSQCQAG
Trigger: ACCGGCCTGGCACTGGCTTTGATCAGAGTGACCTTTTCCTTCCAAACGAGAGCACTTTCGAGAGCCGGAGAGGATGCTGGTAATAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 90 bp TCATTCTGGTGGCCCCTCTCTGTCCGAAGATGTGTGAGGAAGATCTaGGAGGATTGCACTACCAGAGGAGCTGCTGCCCTGCAGACCAAA +
Preference number: 6 (lower is better)
Translates to: SFWWPLSVRRCVRKI*EDCTTRGAAALQTK
Trigger: TTTGGTCTGCAGGGCAGCAGCTCCTCTGGTAGTGCAATCCTCCAAGATCTTCCTCACACATCTTCGGACAGAGAGGGGCCACCAGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS TCA 72 bp CTCCTCTTGGGGCCTTTAACTGAGAGTAGGAGCGACTaGATAGCCCCAGCCTCTCTGATGGGACAGCCAAAA +
Preference number: 6 (lower is better)
Translates to: LLLGPLTESRSD*IAPASLMGQPK
Trigger: TTTTGGCTGTCCCATCAGAGAGGCTGGGGCTATTCAGTCGCTCCTACTCTCAGTTAAAGGCCCCAAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 72 bp GCATACGGACGCATTCACATAGGTGGTCGTCCCATCTaGCATGACACCATACCCTTCGTGGATGTGGCCAAA +
Preference number: 6 (lower is better)
Translates to: AYGRIHIGGRPI*HDTIPFVDVAK
Trigger: TTTGGCCACATCCACGAAGGGTATGGTGTCATGGCAGATGGGACGACCACCTATGTGAATGCGTCCGTATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS CCA 72 bp CCTTGGAAAGCTTTCACCAGGATCCTAGACGCACCTTaGCTCCGTCTCCTCTTGGGGCCTTTAACTGAGAGT +
Preference number: 6 (lower is better)
Translates to: PWKAFTRILDAP*LRLLLGPLTES
Trigger: ACTCTCAGTTAAAGGCCCCAAGAGGAGACGGAGCCAAGGTGCGTCTAGGATCCTGGTGAAAGCTTTCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 72 bp CCAGCATCCTCTCCGGCTCTCGAAAGTGCTCTCGTTTaGAAGGAAAAGGTCACTCTGATCAAAGCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: PASSPALESALV*KEKVTLIKASA
Trigger: GGCACTGGCTTTGATCAGAGTGACCTTTTCCTTCCAAACGAGAGCACTTTCGAGAGCCGGAGAGGATGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 90 bp ACTTCCCAGGGAGTTGTGGCTGGACACGTCCACTACAACCCACCCTaGACACGTTTTTCTAGGCAAATTCTTCACCACCACCCCCATCTG +
Preference number: 6 (lower is better)
Translates to: TSQGVVAGHVHYNPP*TRFSRQILHHHPHL
Trigger: CAGATGGGGGTGGTGGTGAAGAATTTGCCTAGAAAAACGTGTCAAGGGTGGGTTGTAGTGGACGTGTCCAGCCACAACTCCCTGGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 72 bp ACCAGCATCCTCTCCGGCTCTCGAAAGTGCTCTCGTTaGGAAGGAAAAGGTCACTCTGATCAAAGCCAGTGC +
Preference number: 6 (lower is better)
Translates to: TSILSGSRKCSR*EGKGHSDQSQC
Trigger: GCACTGGCTTTGATCAGAGTGACCTTTTCCTTCCAAACGAGAGCACTTTCGAGAGCCGGAGAGGATGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 90 bp CTGCTGCCCTGCAGACCAAAGATAGATTTTGCTTCACCGTGTGACTaGAAGCATCACTTCCAGCCAACACAGGCCTCTCAAACTCAGCGC +
Preference number: 6 (lower is better)
Translates to: LLPCRPKIDFASPCD*KHHFQPTQASQTQR
Trigger: GCGCTGAGTTTGAGAGGCCTGTGTTGGCTGGAAGTGATGCTTCAAGTCACACGGTGAAGCAAAATCTATCTTTGGTCTGCAGGGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 90 bp GGCTCGCCGGGCTTGTCTTCAAATTCTGAATATTCTCCATTCCCATaGCACAGAACGAGCCCCGAGACGCAAAGAAACACACAAAGCTCG +
Preference number: 6 (lower is better)
Translates to: GSPGLSSNSEYSPFP*HRTSPETQRNTQSS
Trigger: CGAGCTTTGTGTGTTTCTTTGCGTCTCGGGGCTCGTTCTGTGCAATGGGAATGGAGAATATTCAGAATTTGAAGACAAGCCCGGCGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000447567.1
ENST00000465861.1
ENST00000480239.1
CDS TCA 72 bp GAATGCAGTCGGCTCGCCGGGCTTGTCTTCAAATTCTaGATATTCTCCATTCCCATTGCACAGAACGAGCCC +
Preference number: 6 (lower is better)
Translates to: ECSRLAGLVFKF*IFSIPIAQNEP
Trigger: GGGCTCGTTCTGTGCAATGGGAATGGAGAATATTCAGAATTTGAAGACAAGCCCGGCGAGCCGACTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000447567.1
ENST00000465861.1
ENST00000480239.1
CDS TCA 72 bp GCCCTGCAGACCAAAGATAGATTTTGCTTCACCGTGTaGCTTGAAGCATCACTTCCAGCCAACACAGGCCTC +
Preference number: 6 (lower is better)
Translates to: ALQTKDRFCFTV*LEASLPANTGL
Trigger: GAGGCCTGTGTTGGCTGGAAGTGATGCTTCAAGTCACACGGTGAAGCAAAATCTATCTTTGGTCTGCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 72 bp GGAGTTGTGGCTGGACACGTCCACTACAACCCACCCTaGACACGTTTTTCTAGGCAAATTCTTCACCACCAC +
Preference number: 6 (lower is better)
Translates to: GVVAGHVHYNPP*TRFSRQILHHH
Trigger: GTGGTGGTGAAGAATTTGCCTAGAAAAACGTGTCAAGGGTGGGTTGTAGTGGACGTGTCCAGCCACAACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 72 bp TGCAGAGAAAAAGCCGGCTTGGCTCAGCAAAGGCAGTaGTTACTAGGGCTTTTGTTGCAATGTGGCGAAATG +
Preference number: 6 (lower is better)
Translates to: CREKAGLAQQRQ*LLGLLLQCGEM
Trigger: CATTTCGCCACATTGCAACAAAAGCCCTAGTAAGCACTGCCTTTGCTGAGCCAAGCCGGCTTTTTCTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 72 bp GCCACTATTACCAGCATCCTCTCCGGCTCTCGAAAGTaGTCTCGTTTGGAAGGAAAAGGTCACTCTGATCAA +
Preference number: 6 (lower is better)
Translates to: ATITSILSGSRK*SRLEGKGHSDQ
Trigger: TTGATCAGAGTGACCTTTTCCTTCCAAACGAGAGCACTTTCGAGAGCCGGAGAGGATGCTGGTAATAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 72 bp TTCTCTTCCATTCATCGGCAGCTCTTTAACAATCACTaGGGGGCTAGCATAATATGGTGCTGTCCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: FSSIHRQLFNNH*GASIIWCCPGS
Trigger: GGACCCAGGACAGCACCATATTATGCTAGCCCCCCAGTGATTGTTAAAGAGCTGCCGATGAATGGAAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 72 bp GGCTTGGCTCAGCAAAGGCAGTGCTTACTAGGGCTTTaGTTGCAATGTGGCGAAATGTCACAGAGAAACCAC +
Preference number: 6 (lower is better)
Translates to: GLAQQRQCLLGL*LQCGEMSQRNH
Trigger: GTGGTTTCTCTGTGACATTTCGCCACATTGCAACAAAAGCCCTAGTAAGCACTGCCTTTGCTGAGCCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 90 bp GAAAAAGCCGGCTTGGCTCAGCAAAGGCAGTGCTTACTAGGGCTTTaGTTGCAATGTGGCGAAATGTCACAGAGAAACCACACTAACCCT +
Preference number: 6 (lower is better)
Translates to: EKAGLAQQRQCLLGL*LQCGEMSQRNHTNP
Trigger: AGGGTTAGTGTGGTTTCTCTGTGACATTTCGCCACATTGCAACAAAAGCCCTAGTAAGCACTGCCTTTGCTGAGCCAAGCCGGCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 72 bp ACAAACATGTGGATTCTCAATCCTTCCTTCCTGGGCTaGTGGAGCACTGAAGGACACAGGAGATTCAAAAGC +
Preference number: 6 (lower is better)
Translates to: TNMWILNPSFLG*WSTEGHRRFKS
Trigger: GCTTTTGAATCTCCTGTGTCCTTCAGTGCTCCAGCAGCCCAGGAAGGAAGGATTGAGAATCCACATGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CCA 72 bp ATTCTCATAGTTCTCCGGCTTCAGCTTCGACACAGATaGGAAGTAGTAAAAGTCCTGCTTGATGAGGTCGGC +
Preference number: 6 (lower is better)
Translates to: ILIVLRLQLRHR*EVVKVLLDEVG
Trigger: GCCGACCTCATCAAGCAGGACTTTTACTACTTCCCATCTGTGTCGAAGCTGAAGCCGGAGAACTATGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417669.6
ENST00000443721.2
CDS TCA 72 bp GTGCTGTCCTGGGTCCAAAACTCGGATGACAGTCAATaGGCACACAGAAACGACTGTCTTATTAAGCATGAG +
Preference number: 6 (lower is better)
Translates to: VLSWVQNSDDSQ*AHRNDCLIKHE
Trigger: CTCATGCTTAATAAGACAGTCGTTTCTGTGTGCTCATTGACTGTCATCCGAGTTTTGGACCCAGGACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 72 bp TTGGCTCAGCAAAGGCAGTGCTTACTAGGGCTTTTGTaGCAATGTGGCGAAATGTCACAGAGAAACCACACT +
Preference number: 6 (lower is better)
Translates to: LAQQRQCLLGLL*QCGEMSQRNHT
Trigger: AGTGTGGTTTCTCTGTGACATTTCGCCACATTGCAACAAAAGCCCTAGTAAGCACTGCCTTTGCTGAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 72 bp TGCAGACCAAAGATAGATTTTGCTTCACCGTGTGACTaGAAGCATCACTTCCAGCCAACACAGGCCTCTCAA +
Preference number: 6 (lower is better)
Translates to: CRPKIDFASPCD*KHHFQPTQASQ
Trigger: TTGAGAGGCCTGTGTTGGCTGGAAGTGATGCTTCAAGTCACACGGTGAAGCAAAATCTATCTTTGGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 72 bp GGCTTGTCTTCAAATTCTGAATATTCTCCATTCCCATaGCACAGAACGAGCCCCGAGACGCAAAGAAACACA +
Preference number: 6 (lower is better)
Translates to: GLSSNSEYSPFP*HRTSPETQRNT
Trigger: TGTGTTTCTTTGCGTCTCGGGGCTCGTTCTGTGCAATGGGAATGGAGAATATTCAGAATTTGAAGACAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000447567.1
ENST00000465861.1
ENST00000480239.1
CDS CAA 72 bp AAAATAAAGCACTTGGAGAGTCACGTATCTATGGAGTaGAAATGGGAAGCTGTTCAGATATGGCTAGGGAGG +
Preference number: 6 (lower is better)
Translates to: KIKHLESHVSME*KWEAVQIWLGR
Trigger: CCTCCCTAGCCATATCTGAACAGCTTCCCATTTCAACTCCATAGATACGTGACTCTCCAAGTGCTTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447567.1
CDS CAA 90 bp CTTATTCCTTTAATTTTAGCTATGAATGCAGTCGGCTCGCCGGGCTaGTCTTCAAATTCTGAATATTCTCCATTCCCATTGCACAGAACG +
Preference number: 6 (lower is better)
Translates to: LIPLILAMNAVGSPG*SSNSEYSPFPLHRT
Trigger: CGTTCTGTGCAATGGGAATGGAGAATATTCAGAATTTGAAGACAAGCCCGGCGAGCCGACTGCATTCATAGCTAAAATTAAAGGAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000447567.1
ENST00000465861.1
ENST00000480239.1
CDS GCA 72 bp GTGGTCCTGGATCATGTCCTGTCTGCCACAAATAGCTaGTCACTTATTCCTTTAATTTTAGCTATGAATGCA +
Preference number: 6 (lower is better)
Translates to: VVLDHVLSATNS*SLIPLILAMNA
Trigger: TGCATTCATAGCTAAAATTAAAGGAATAAGTGAGCAGCTATTTGTGGCAGACAGGACATGATCCAGGACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS CAA 90 bp CTAGTTTTCAAAATAAAGCACTTGGAGAGTCACGTATCTATGGAGTaGAAATGGGAAGCTGTTCAGATCTGTTTCAAACATGCACACAGA +
Preference number: 6 (lower is better)
Translates to: LVFKIKHLESHVSME*KWEAVQICFKHAHR
Trigger: TCTGTGTGCATGTTTGAAACAGATCTGAACAGCTTCCCATTTCAACTCCATAGATACGTGACTCTCCAAGTGCTTTATTTTGAAAACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465861.1
CDS GCA 72 bp AAACAGATGGATCATGTCCTGTCTGCCACAAATAGCTaGTCACTTATTCCTTTAATTTTAGCTATGAATGCA +
Preference number: 6 (lower is better)
Translates to: KQMDHVLSATNS*SLIPLILAMNA
Trigger: TGCATTCATAGCTAAAATTAAAGGAATAAGTGAGCAGCTATTTGTGGCAGACAGGACATGATCCATCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447567.1
ENST00000480239.1