RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000105926

Ensembl transcript IDs: ENST00000222644.10, ENST00000396475.6, ENST00000409761.5, ENST00000426450.1, ENST00000430180.5, ENST00000432190.5, ENST00000464384.2, ENST00000472674.1, ENST00000625307.1

Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAGAACCCTGGGACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTaGTCATTCCTGCAGATTCATTTGGGACTTGGGTTTCAAGTTCAA +
Preference number: 1 (lower is better)
Translates to: GRTLGPLGLFAPAEH*SFLQIHLGLGFQVQ
Trigger: TTGAACTTGAAACCCAAGTCCCAAATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTCCCAGGGTTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR GCA 90 bp ATACTCTCATTACCTAGGAAGAACCCTGGGACCTCTGGGGCTGTTTaGCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTTGGGACT +
Preference number: 1 (lower is better)
Translates to: ILSLPRKNPGTSGAV*PRRALLIPADSFGT
Trigger: AGTCCCAAATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTCCCAGGGTTCTTCCTAGGTAATGAGAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR GCA 90 bp TCGGTCAGAAGCTTGGTAGTGATTCCTGCATCCACCACAGCCTTGTaGATGGCACGTAACGTCTCTAGCTCCGGAGCCGCAATAAATACC +
Preference number: 1 (lower is better)
Translates to: SVRSLVVIPASTTAL*MARNVSSSGAAINT
Trigger: GGTATTTATTGCGGCTCCGGAGCTAGAGACGTTACGTGCCATGCACAAGGCTGTGGTGGATGCAGGAATCACTACCAAGCTTCTGACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR GCA 90 bp TGGGACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTaGAGATTCATTTGGGACTTGGGTTTCAAGTTCAATGATTCTTCA +
Preference number: 1 (lower is better)
Translates to: WDLWGCLPPQSTAHS*RFIWDLGFKFNDSS
Trigger: TGAAGAATCATTGAACTTGAAACCCAAGTCCCAAATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR GCA 90 bp TCGGGGGCAAAGATCAGAGTCTTCTGGTGTAACCGAGTACTGGATTaGTTGCTTACATTTTGTTTGATTTGTGAGTGGTCTGGTTGGCAG +
Preference number: 1 (lower is better)
Translates to: SGAKIRVFWCNRVLD*LLTFCLICEWSGWQ
Trigger: CTGCCAACCAGACCACTCACAAATCAAACAAAATGTAAGCAAGCAATCCAGTACTCGGTTACACCAGAAGACTCTGATCTTTGCCCCCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CCA 90 bp GGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTTaGGACTTGGGTTTCAAGTTCAATGATTCTTCATTGAGATACAAT +
Preference number: 1 (lower is better)
Translates to: GCLPPQSTAHSCRFI*DLGFKFNDSSLRYN
Trigger: ATTGTATCTCAATGAAGAATCATTGAACTTGAAACCCAAGTCCCAAATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR TCA 90 bp AATATATATATAGTCTTAGGTTGTGTACAGTCATGCCCTGAGTGCTaGAATGTGGACACTGACCTATCCACAAGGAGCCCTCAGGCACAT +
Preference number: 1 (lower is better)
Translates to: NIYIVLGCVQSCPEC*NVDTDLSTRSPQAH
Trigger: ATGTGCCTGAGGGCTCCTTGTGGATAGGTCAGTGTCCACATTTCAGCACTCAGGGCATGACTGTACACAACCTAAGACTATATATATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR TCA 90 bp TCTTCTGGTGTAACCGAGTACTGGATTGCTTGCTTACATTTTGTTTaGTTTGTGAGTGGTCTGGTTGGCAGCAAGGATTTGCTAAGGGTT +
Preference number: 1 (lower is better)
Translates to: SSGVTEYWIACLHFV*FVSGLVGSKDLLRV
Trigger: AACCCTTAGCAAATCCTTGCTGCCAACCAGACCACTCACAAATCAAACAAAATGTAAGCAAGCAATCCAGTACTCGGTTACACCAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR TCA 90 bp GCTCCAACAGAGCTCAACATAACATGGAGAAATTGCACTTGTTGCTaGATACTAGTGCTCATTCTTCTACAACAGAGTCCAACATATCAC +
Preference number: 1 (lower is better)
Translates to: APTELNITWRNCTCC*ILVLILLQQSPTYH
Trigger: GTGATATGTTGGACTCTGTTGTAGAAGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGCTCTGTTGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CCA 90 bp TTAATATCTGCTTCCATCTCAGATCGTGACACAAACTTATATGCCTaGCCATCTTTTTCATCTTCCCTTGGTTTCCGTGAAGTAAATGGC +
Preference number: 1 (lower is better)
Translates to: LISASISDRDTNLYA*PSFSSSLGFREVNG
Trigger: GCCATTTACTTCACGGAAACCAAGGGAAGATGAAAAAGATGGCCAGGCATATAAGTTTGTGTCACGATCTGAGATGGAAGCAGATATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR CCA 90 bp ATTTTCATTGTTAACCTTACTGAATCATCAGTAAACCCAGCTGATTaGGACCCACTGTGGTTCCATTCTCAGTTTCTCTATGGCAGTTTG +
Preference number: 1 (lower is better)
Translates to: IFIVNLTESSVNPAD*DPLWFHSQFLYGSL
Trigger: CAAACTGCCATAGAGAAACTGAGAATGGAACCACAGTGGGTCCCAATCAGCTGGGTTTACTGATGATTCAGTAAGGTTAACAATGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR TCA 90 bp TTCAATACTATGAACCTGTTTTTCAAGCTTCTTCGGCCTACACCTTaGGCTCCTATCAATACTAATGTTTTTCTCTGGAAGGGAGGCATT +
Preference number: 1 (lower is better)
Translates to: FNTMNLFFKLLRPTP*APINTNVFLWKGGI
Trigger: AATGCCTCCCTTCCAGAGAAAAACATTAGTATTGATAGGAGCTCAAGGTGTAGGCCGAAGAAGCTTGAAAAACAGGTTCATAGTATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR GCA 90 bp TCAGGCACATTAATACGTTGGCACATCATGTTTCCCAAAAGCACATaGATGTGTGTGTCTATTTCAACTCTTAACAATTGCTCAACACCA +
Preference number: 1 (lower is better)
Translates to: SGTLIRWHIMFPKST*MCVSISTLNNCSTP
Trigger: TGGTGTTGAGCAATTGTTAAGAGTTGAAATAGACACACACATGCATGTGCTTTTGGGAAACATGATGTGCCAACGTATTAATGTGCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR GCA 90 bp TATGATGATCAAATCAAAATAGTGGTTGTATGCTCTCTGAATCCGTaGACTTTCATCCACTGTTTTCTTCAAGTCAGAGTCGGTCAGAAG +
Preference number: 1 (lower is better)
Translates to: YDDQIKIVVVCSLNP*TFIHCFLQVRVGQK
Trigger: CTTCTGACCGACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCACGGATTCAGAGAGCATACAACCACTATTTTGATTTGATCATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR GCA 90 bp TTCTGTGGTAGCAACACCACCTATTTCATAAGATTCAAAGACAGTTaGTTTACAAGCAGTAAATCACTCAATCTTCTGATTGGTGGCATT +
Preference number: 1 (lower is better)
Translates to: FCGSNTTYFIRFKDS*FTSSKSLNLLIGGI
Trigger: AATGCCACCAATCAGAAGATTGAGTGATTTACTGCTTGTAAAGCAACTGTCTTTGAATCTTATGAAATAGGTGGTGTTGCTACCACAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR TCA 90 bp GCAGATTCATTTGGGACTTGGGTTTCAAGTTCAATGATTCTTCATTaGGATACAATGAACTTATCTAACTGTATTCTTGTTAGTACGGGC +
Preference number: 1 (lower is better)
Translates to: ADSFGTWVSSSMILH*DTMNLSNCILVSTG
Trigger: GCCCGTACTAACAAGAATACAGTTAGATAAGTTCATTGTATCTCAATGAAGAATCATTGAACTTGAAACCCAAGTCCCAAATGAATCTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CAA 90 bp GAGTCGGTCAGAAGCTTGGTAGTGATTCCTGCATCCACCACAGCCTaGTGCATGGCACGTAACGTCTCTAGCTCCGGAGCCGCAATAAAT +
Preference number: 2 (lower is better)
Translates to: ESVRSLVVIPASTTA*CMARNVSSSGAAIN
Trigger: ATTTATTGCGGCTCCGGAGCTAGAGACGTTACGTGCCATGCACAAGGCTGTGGTGGATGCAGGAATCACTACCAAGCTTCTGACCGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR-3UTR TCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGCTCTCTCAGTCTGCATaGCCTTGCTTCCAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVLSQSA*PCFQPQ
Trigger: CTGGGGCTGGAAGCAAGGTCATGCAGACTGAGAGAG...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
3UTR-3UTR TCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTCATAGGGCATCACCTTaGTACTGTGCTTTAATTCAT +
Preference number: 2 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIHRASP*YCALIH
Trigger: ATGAATTAAAGCACAGTATCAAGGTGATGCCCTATG...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR GCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTTTTAAAGAGGCTCCATaGTGCAGCATGAAAGTACAT +
Preference number: 2 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIFKEAP*CSMKVH
Trigger: ATGTACTTTCATGCTGCAGCATGGAGCCTCTTTAAA...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTGTTGTTCAATGGGTTTaGTTCTCAACACAACAGACA +
Preference number: 2 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIVVQWV*FSTQQT
Trigger: TGTCTGTTGTGTTGAGAACCAAACCCATTGAACAAC...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CCA 90 bp CTTCAAGTCAGAGTCGGTCAGAAGCTTGGTAGTGATTCCTGCATCCACCACAGCGGAAGGGAGGCATTTTaGCTACCTCCTCATATATCT +
Preference number: 2 (lower is better)
Translates to: LQVRVGQKLGSDSCIHHSGREAF*LPPHIS
Trigger: AGATATATGAGGAGGTAGCCAAAATGCCTCCCTTCC...GCTGTGGTGGATGCAGGAATCACTACCAAGCTTCTGACCGACTCTGACTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR-3UTR GCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTCTTCAAGTGTCATTTTaGTGTAAGGTTTTACAGGAT +
Preference number: 2 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFILQVSF*CKVLQD
Trigger: ATCCTGTAAAACCTTACAGCAAAATGACACTTGAAG...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGCAGCAGCCAGGTGTCTaGCACCTAACACCAGACAAA +
Preference number: 2 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVQQPGV*HLTPDK
Trigger: TTTGTCTGGTGTTAGGTGCCAGACACCTGGCTGCTG...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
3UTR CAA 90 bp TGGACACTGACCTATCCACAAGGAGCCCTCAGGCACATTAATACGTaGGCACATCATGTTTCCCAAAAGCACATGCATGTGTGTGTCTAT +
Preference number: 2 (lower is better)
Translates to: WTLTYPQGALRHINT*AHHVSQKHMHVCVY
Trigger: ATAGACACACACATGCATGTGCTTTTGGGAAACATGATGTGCCAACGTATTAATGTGCCTGAGGGCTCCTTGTGGATAGGTCAGTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGGTAATCTCAATTACTTaGGAGGCTGAGGCACGAGAG +
Preference number: 2 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVVISIT*EAEARE
Trigger: CTCTCGTGCCTCAGCCTCCCAAGTAATTGAGATTAC...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
3UTR-3UTR CCA 90 bp AGAAGCTTGGTAGTGATTCCTGCATCCACCACAGCCTTGTGCATGGCACGTAACACAAACTTATATGCCTaGCCATCTTTTTCATCTTCC +
Preference number: 2 (lower is better)
Translates to: RSLVVIPASTTALCMARNTNLYA*PSFSSS
Trigger: GGAAGATGAAAAAGATGGCCAGGCATATAAGTTTGT...GTTACGTGCCATGCACAAGGCTGTGGTGGATGCAGGAATCACTACCAAGCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR CAA 90 bp GTCTTCTGGTGTAACCGAGTACTGGATTGCTTGCTTACATTTTGTTaGATTTGTGAGTGGTCTGGTTGGCAGCAAGGATTTGCTAAGGGT +
Preference number: 2 (lower is better)
Translates to: VFWCNRVLDCLLTFC*ICEWSGWQQGFAKG
Trigger: ACCCTTAGCAAATCCTTGCTGCCAACCAGACCACTCACAAATCAAACAAAATGTAAGCAAGCAATCCAGTACTCGGTTACACCAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR TCA 90 bp TGCTTGTGGGTTGACATCCAGAATGCAAGTCCGTCCAGTTTGGACAACCTCAAGTGGGATTCAATACTATaGACCTGTTTTTCAAGCTTC +
Preference number: 2 (lower is better)
Translates to: CLWVDIQNASPSSLDNLKWDSIL*TCFSSF
Trigger: GAAGCTTGAAAAACAGGTTCATAGTATTGAATCCCA...CTTGAGGTTGTCCAAACTGGACGGACTTGCATTCTGGATGTCAACCCACAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR CAA 90 bp TTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTTGGGACTaGGGTTTCAAGTTCAATGATTCTTCATTGAGATACAATGAACTT +
Preference number: 2 (lower is better)
Translates to: LPPQSTAHSCRFIWD*GFKFNDSSLRYNEL
Trigger: AAGTTCATTGTATCTCAATGAAGAATCATTGAACTTGAAACCCAAGTCCCAAATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR TCA 90 bp CTGAATCCGTGCACTTTCATCCACTGTTTTCTTCAAGTCAGAGTCGGTCAGAAGATAGGGCATAAACTCTaGTGTCCTCAATACTTTCAG +
Preference number: 2 (lower is better)
Translates to: LNPCTFIHCFLQVRVGQKIGHKL*CPQYFQ
Trigger: CTGAAAGTATTGAGGACATCAGAGTTTATGCCCTAT...CTTCTGACCGACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCACGGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR-3UTR CCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGAAAAAGTACACTTCTTaGCTAGGTGCAGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVKKYTS*LGAVAH
Trigger: ATGAGCCACTGCACCTAGCCAAGAAGTGTACTTTTT...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
3UTR CAA 90 bp AAGCTAATTATCGCAGATCTTCCCAAAAGAGAAGTTCACATTTCCTaGATCACAGCTATACTCTCATTACCTAGGAAGAACCCTGGGACC +
Preference number: 2 (lower is better)
Translates to: KLIIADLPKREVHIS*ITAILSLPRKNPGT
Trigger: GGTCCCAGGGTTCTTCCTAGGTAATGAGAGTATAGCTGTGATCAAGGAAATGTGAACTTCTCTTTTGGGAAGATCTGCGATAATTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CAA 90 bp ACCATAGGCTCCAACAGAGCTCAACATAACATGGAGAAATTGCACTaGTTGCTGAATACTAGTGCTCATTCTTCTACAACAGAGTCCAAC +
Preference number: 2 (lower is better)
Translates to: TIGSNRAQHNMEKLH*LLNTSAHSSTTESN
Trigger: GTTGGACTCTGTTGTAGAAGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGCTCTGTTGGAGCCTATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTTGTGAGTGGTCTGGTTaGCAGCAAGGATTTGCTAAG +
Preference number: 2 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSCEWSG*QQGFAK
Trigger: CTTAGCAAATCCTTGCTGCCAACCAGACCACTCACA...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CAA 90 bp ATACTCACCATAGGCTCCAACAGAGCTCAACATAACATGGAGAAATaGCACTTGTTGCTGAATACTAGTGCTCATTCTTCTACAACAGAG +
Preference number: 2 (lower is better)
Translates to: ILTIGSNRAQHNMEK*HLLLNTSAHSSTTE
Trigger: CTCTGTTGTAGAAGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGCTCTGTTGGAGCCTATGGTGAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR TCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTCTAGGACAAGAAACGTaGATTTGTGTTCTGGCCATG +
Preference number: 2 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSLGQET*ICVLAM
Trigger: CATGGCCAGAACACAAATTCACGTTTCTTGTCCTAG...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR TCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTTCACAGCAAACCTCTTaGAATAAGACAAGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSSQQTS*NKTRAG
Trigger: ACCTGCCCTTGTCTTATTTCAAGAGGTTTGCTGTGA...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR GCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGAACCTCAAAAGAGAGTaGAAGGTATTGCTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVNLKRE*KVLLFN
Trigger: ATTGAAGAGCAATACCTTGCACTCTCTTTTGAGGTT...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
3UTR CAA 90 bp ATAGGCTCCAACAGAGCTCAACATAACATGGAGAAATTGCACTTGTaGCTGAATACTAGTGCTCATTCTTCTACAACAGAGTCCAACATA +
Preference number: 2 (lower is better)
Translates to: IGSNRAQHNMEKLHL*LNTSAHSSTTESNI
Trigger: TATGTTGGACTCTGTTGTAGAAGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGCTCTGTTGGAGCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR TCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTTACGGGCATCTAGACTaGAATGAACTAAACTGCATC +
Preference number: 2 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSYGHLD*NELNCI
Trigger: GATGCAGTTTAGTTCATTTCAGTCTAGATGCCCGTA...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGCTGTATAAATTAGAATaGATAGCCATACATCTCCGA +
Preference number: 2 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVLYKLE*IAIHLR
Trigger: TCGGAGATGTATGGCTATCCATTCTAATTTATACAG...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
3UTR-3UTR TCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTTGGCTCTCTAGCCTGTaGTTTCTGGATAATGGAGTA +
Preference number: 2 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIWLSSL*FLDNGV
Trigger: TACTCCATTATCCAGAAATCACAGGCTAGAGAGCCA...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTCTGAGTGCTGAAATGTaGACACTGACCTATCCACAA +
Preference number: 2 (lower is better)
Translates to: QFTISQLPHQSYKLQIRILSAEM*TLTYPQ
Trigger: TTGTGGATAGGTCAGTGTCCACATTTCAGCACTCAG...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTCTAGCCTGTGATTTCTaGATAATGGAGTACTGTTTC +
Preference number: 2 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSLACDF*IMEYCF
Trigger: GAAACAGTACTCCATTATCCAGAAATCACAGGCTAG...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR TCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTAATCACTCAATCTTCTaGTTGGTGGCATTTACCTTA +
Preference number: 2 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSNHSIF*LVAFTL
Trigger: TAAGGTAAATGCCACCAATCAGAAGATTGAGTGATT...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR GCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTACAAAAACCTCCAACTaGAAACTTAGAGGCATCTCT +
Preference number: 2 (lower is better)
Translates to: QFTISQLPHQSYKLQIRITKTSN*KLRGIS
Trigger: AGAGATGCCTCTAAGTTTGCAGTTGGAGGTTTTTGT...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR TCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTAAGTTCACATTTCCTTaGTCACAGCTATACTCTCAT +
Preference number: 2 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIKFTFP*SQLYSH
Trigger: ATGAGAGTATAGCTGTGATCAAGGAAATGTGAACTT...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR GCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTAACCTCAAAAGAGAGTaGAAGGTATTGCTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: QFTISQLPHQSYKLQIRINLKRE*KVLLFN
Trigger: ATTGAAGAGCAATACCTTGCACTCTCTTTTGAGGTT...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTCTGTATAAATTAGAATaGATAGCCATACATCTCCGA +
Preference number: 2 (lower is better)
Translates to: QFTISQLPHQSYKLQIRILYKLE*IAIHLR
Trigger: TCGGAGATGTATGGCTATCCATTCTAATTTATACAG...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTGATTCATTTGGGACTTaGGTTTCAAGTTCAATGATT +
Preference number: 2 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIDSFGT*VSSSMI
Trigger: AATCATTGAACTTGAAACCCAAGTCCCAAATGAATC...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CAA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTCCCAGGAGGCAGAGGTaGCAGCGGGCTGAGATCGCG +
Preference number: 3 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIPRRQR*QRAEIA
Trigger: CGCGATCTCAGCCCGCTGCAACCTCTGCCTCCTGGG...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR GCA 72 bp CTGGGACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTaGTCATTCCTGCAGATTCATTTGGGACTTGGGTTT +
Preference number: 3 (lower is better)
Translates to: LGPLGLFAPAEH*SFLQIHLGLGF
Trigger: AAACCCAAGTCCCAAATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR GCA 72 bp TTACCTAGGAAGAACCCTGGGACCTCTGGGGCTGTTTaGCCCCGCAGAGCACTGCTCATTCCTGCAGATTCA +
Preference number: 3 (lower is better)
Translates to: LPRKNPGTSGAV*PRRALLIPADS
Trigger: TGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTCCCAGGGTTCTTCCTAGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR GCA 72 bp TGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTaGAGATTCATTTGGGACTTGGGTTTCAAGTTCAAT +
Preference number: 3 (lower is better)
Translates to: WGCLPPQSTAHS*RFIWDLGFKFN
Trigger: ATTGAACTTGAAACCCAAGTCCCAAATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CAA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTGACCTCTGGGGCTGTTaGCCCCCGCAGAGCACTGCT +
Preference number: 3 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSDLWGC*PPQSTA
Trigger: AGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CCA 72 bp CCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTTaGGACTTGGGTTTCAAGTTCAATGATTCTTCATTG +
Preference number: 3 (lower is better)
Translates to: PPQSTAHSCRFI*DLGFKFNDSSL
Trigger: CAATGAAGAATCATTGAACTTGAAACCCAAGTCCCAAATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CCA 72 bp CCTATCCACAAGGAGCCCTCAGGCACATTAATACGTTaGCACATCATGTTTCCCAAAAGCACATGCATGTGT +
Preference number: 3 (lower is better)
Translates to: PIHKEPSGTLIR*HIMFPKSTCMC
Trigger: ACACATGCATGTGCTTTTGGGAAACATGATGTGCCAACGTATTAATGTGCCTGAGGGCTCCTTGTGGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CAA 90 bp TGCACTTTCATCCACTGTTTTCTTCAAGTCAGAGTCGGTCAGAAGCTTGGTAGTTGGAAGGGAGGCATTTaGGCTACCTCCTCATATATC +
Preference number: 3 (lower is better)
Translates to: CTFIHCFLQVRVGQKLGSWKGGI*ATSSYI
Trigger: GATATATGAGGAGGTAGCCAAAATGCCTCCCTTCCA...ACTACCAAGCTTCTGACCGACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR CCA 72 bp GTAGGACAGTTTTCGGGGGCAAAGATCAGAGTCTTCTaGTGTAACCGAGTACTGGATTGCTTGCTTACATTT +
Preference number: 3 (lower is better)
Translates to: VGQFSGAKIRVF*CNRVLDCLLTF
Trigger: AAATGTAAGCAAGCAATCCAGTACTCGGTTACACCAGAAGACTCTGATCTTTGCCCCCGAAAACTGTCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CAA 90 bp ATTGGGACCCACTGTGGTTCCATTCTCAGTTTCTCTATGGCAGTTTGCAGTTTTCAATACTTTCAGTGCTaGTGGGTTGACATCCAGAAT +
Preference number: 3 (lower is better)
Translates to: IGTHCGSILSFSMAVCSFQYFQC*WVDIQN
Trigger: ATTCTGGATGTCAACCCACAAGCACTGAAAGTATTG...AAAACTGCAAACTGCCATAGAGAAACTGAGAATGGAACCACAGTGGGTCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR TCA 72 bp TCGCAGATCTTCCCAAAAGAGAAGTTCACATTTCCTTaGTCACAGCTATACTCTCATTACCTAGGAAGAACC +
Preference number: 3 (lower is better)
Translates to: SQIFPKEKFTFP*SQLYSHYLGRT
Trigger: GGTTCTTCCTAGGTAATGAGAGTATAGCTGTGATCAAGGAAATGTGAACTTCTCTTTTGGGAAGATCTGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CAA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGAGAGAGTGCAAGGTATaGCTCTTCAATTTTTCAGTA +
Preference number: 3 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVRECKV*LFNFSV
Trigger: TACTGAAAAATTGAAGAGCAATACCTTGCACTCTCT...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
3UTR-3UTR CAA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGGGTGAATGTGGGAATTaGTATAAGTCAATGCTTCTA +
Preference number: 3 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVGECGN*YKSMLL
Trigger: TAGAAGCATTGACTTATACAAATTCCCACATTCACC...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
3UTR-3UTR CAA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTGTCAGAATTAGGATCTaGGCCAGTACCCTGTCTTTA +
Preference number: 3 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSVRIRI*ASTLSL
Trigger: TAAAGACAGGGTACTGGCCAAGATCCTAATTCTGAC...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR TCA 72 bp GAGCTCAACATAACATGGAGAAATTGCACTTGTTGCTaGATACTAGTGCTCATTCTTCTACAACAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: ELNITWRNCTCC*ILVLILLQQSP
Trigger: TGGACTCTGTTGTAGAAGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR TCA 72 bp ATGAACCTGTTTTTCAAGCTTCTTCGGCCTACACCTTaGGCTCCTATCAATACTAATGTTTTTCTCTGGAAG +
Preference number: 3 (lower is better)
Translates to: MNLFFKLLRPTP*APINTNVFLWK
Trigger: CTTCCAGAGAAAAACATTAGTATTGATAGGAGCTCAAGGTGTAGGCCGAAGAAGCTTGAAAAACAGGTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR TCA 72 bp CTTTCCAGCTTTAATATCTGCTTCCATCTCAGATCGTaGCACAAACTTATATGCCTGGCCATCTTTTTCATC +
Preference number: 3 (lower is better)
Translates to: LSSFNICFHLRS*HKLICLAIFFI
Trigger: GATGAAAAAGATGGCCAGGCATATAAGTTTGTGTCACGATCTGAGATGGAAGCAGATATTAAAGCTGGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR GCA 72 bp CAAATCAAAATAGTGGTTGTATGCTCTCTGAATCCGTaGACTTTCATCCACTGTTTTCTTCAAGTCAGAGTC +
Preference number: 3 (lower is better)
Translates to: QIKIVVVCSLNP*TFIHCFLQVRV
Trigger: GACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCACGGATTCAGAGAGCATACAACCACTATTTTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR TCA 72 bp AAGTGTGTGTTGAAACATTGTCATAGGGCATCACCTTaGTACTGTGCTTTAATTCATGTTGCTTTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: KCVLKHCHRASP*YCALIHVALRS
Trigger: GCTTCTCAAAGCAACATGAATTAAAGCACAGTATCAAGGTGATGCCCTATGACAATGTTTCAACACACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR TCA 72 bp CAGATGTTATTACATGAATTCTCACAGCAAACCTCTTaGAATAAGACAAGGGCAGGTATCATAATCTCAGCC +
Preference number: 3 (lower is better)
Translates to: QMLLHEFSQQTS*NKTRAGIIISA
Trigger: GGCTGAGATTATGATACCTGCCCTTGTCTTATTTCAAGAGGTTTGCTGTGAGAATTCATGTAATAACATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR-3UTR CAA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAAGAGAGTGCAAGGTATaGCTCTTCAATTTTTCAGTA +
Preference number: 3 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQRECKV*LFNFSV
Trigger: TACTGAAAAATTGAAGAGCAATACCTTGCACTCTCT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
3UTR-3UTR CAA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTCGAGTACTGGATTGCTaGCTTACATTTTGTTTGATT +
Preference number: 3 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSRVLDC*LTFCLI
Trigger: AATCAAACAAAATGTAAGCAAGCAATCCAGTACTCG...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR GCA 72 bp TTAATACGTTGGCACATCATGTTTCCCAAAAGCACATaGATGTGTGTGTCTATTTCAACTCTTAACAATTGC +
Preference number: 3 (lower is better)
Translates to: LIRWHIMFPKST*MCVSISTLNNC
Trigger: GCAATTGTTAAGAGTTGAAATAGACACACACATGCATGTGCTTTTGGGAAACATGATGTGCCAACGTATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR TCA 72 bp GGTTCATTACTACAAAATTATTGGCTCTCTAGCCTGTaGTTTCTGGATAATGGAGTACTGTTTCAGAAGTTA +
Preference number: 3 (lower is better)
Translates to: GSLLQNYWLSSL*FLDNGVLFQKL
Trigger: TAACTTCTGAAACAGTACTCCATTATCCAGAAATCACAGGCTAGAGAGCCAATAATTTTGTAGTAATGAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR TCA 72 bp ACAGTTGCTTTACAAGCAGTAAATCACTCAATCTTCTaGTTGGTGGCATTTACCTTAACTATAGATGTGTTC +
Preference number: 3 (lower is better)
Translates to: TVALQAVNHSIF*LVAFTLTIDVF
Trigger: GAACACATCTATAGTTAAGGTAAATGCCACCAATCAGAAGATTGAGTGATTTACTGCTTGTAAAGCAACTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR TCA 72 bp ATTTATGTATGTTCCTTCCCCTGGCTTGCTGTTGGCTaGAGTACAATAAAGACATCTATTTCCAATTTTAAG +
Preference number: 3 (lower is better)
Translates to: IYVCSFPWLAVG*STIKTSISNFK
Trigger: CTTAAAATTGGAAATAGATGTCTTTATTGTACTTCAGCCAACAGCAAGCCAGGGGAAGGAACATACATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CCA 72 bp TCATATTTATGTATGTTCCTTCCCCTGGCTTGCTGTTaGCTGAAGTACAATAAAGACATCTATTTCCAATTT +
Preference number: 3 (lower is better)
Translates to: SYLCMFLPLACC*LKYNKDIYFQF
Trigger: AAATTGGAAATAGATGTCTTTATTGTACTTCAGCCAACAGCAAGCCAGGGGAAGGAACATACATAAATATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CCA 72 bp TACTACAAAATTATTGGCTCTCTAGCCTGTGATTTCTaGATAATGGAGTACTGTTTCAGAAGTTACAAAAGT +
Preference number: 3 (lower is better)
Translates to: YYKIIGSLACDF*IMEYCFRSYKS
Trigger: ACTTTTGTAACTTCTGAAACAGTACTCCATTATCCAGAAATCACAGGCTAGAGAGCCAATAATTTTGTAGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTGAACCCTGGGACCTCTaGGGCTGTTTGCCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIEPWDL*GCLPPQ
Trigger: CTGCGGGGGCAAACAGCCCCAGAGGTCCCAGGGTTC...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGGCTCCCCGCCGCCGCTaGTCTCCCTCAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVAPRRR*SPSATG
Trigger: GCCTGTGGCTGAGGGAGAGCAGCGGCGGCGGGGAGC...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTAGGTTTTCCAAGACTTaGTGCATTGCGGCTCGCACC +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIRFSKT*CIAART
Trigger: GGTGCGAGCCGCAATGCAGCAAGTCTTGGAAAACCT...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTCCACAGCCTTGTGCATaGCACGTAACGTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIPQPCA*HVTSLA
Trigger: AGCTAGAGACGTTACGTGCCATGCACAAGGCTGTGG...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CAA 72 bp AGAAGCTTGGTAGTGATTCCTGCATCCACCACAGCCTaGTGCATGGCACGTAACGTCTCTAGCTCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: RSLVVIPASTTA*CMARNVSSSGA
Trigger: GGCTCCGGAGCTAGAGACGTTACGTGCCATGCACAAGGCTGTGGTGGATGCAGGAATCACTACCAAGCTTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR TCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTCCCTGGCCAACATGGTaGAACCCCATCTGTACTAAA +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIPWPTW*NPICTK
Trigger: TTTAGTACAGATGGGGTTTCACCATGTTGGCCAGGG...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTCTTGGTAGTGATTCCTaGATCCACCACAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFILGSDS*IHHSLV
Trigger: CACAAGGCTGTGGTGGATGCAGGAATCACTACCAAG...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGCTCCCCGCCGCCGCTaGTCTCCCTCAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQAPRRR*SPSATG
Trigger: GCCTGTGGCTGAGGGAGAGCAGCGGCGGCGGGGAGC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTAAATGTCACACCCAGTaGTTCCCCAGCTCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIKCHTQ*FPSSFV
Trigger: CACAAAAGAGCTGGGGAACCACTGGGTGTGACATTT...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTCTTCGGCCTACACCTTaGGCTCCTATCAATACTAAT +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFILRPTP*APINTN
Trigger: ATTAGTATTGATAGGAGCTCAAGGTGTAGGCCGAAG...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTCTAGGACAAGAAACGTaGATTTGTGTTCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFILGQET*ICVLAM
Trigger: CATGGCCAGAACACAAATTCACGTTTCTTGTCCTAG...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTGGAAGGGAGGCATTTTaGCTACCTCCTCATATATCT +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIGREAF*LPPHIS
Trigger: AGATATATGAGGAGGTAGCCAAAATGCCTCCCTTCC...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTCTCCATGCTGCAGCATaGAAGTACATTAGAGAATAC +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFILHAAA*KYIREY
Trigger: GTATTCTCTAATGTACTTTCATGCTGCAGCATGGAG...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCCAGGAGGCAGAGGTTaGAGCGGGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLPGGRG*SGLRSR
Trigger: GCGCGATCTCAGCCCGCTGCAACCTCTGCCTCCTGG...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACCAGGAGGCAGAGGTTaGAGCGGGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQPGGRG*SGLRSR
Trigger: GCGCGATCTCAGCCCGCTGCAACCTCTGCCTCCTGG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTATTTCAAGTGTGTGTTaGAACATTGTCATAGGGCAT +
Preference number: 4 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIISSVC*NIVIGH
Trigger: ATGCCCTATGACAATGTTTCAACACACACTTGAAAT...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp CTGAATCCGTGCACTTTCATCCACTGTTTTCTTCAAGTCAGAGTCGGTCAGAAGCCACAGCCTTGTGCATaGCACGTAACGTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: LNPCTFIHCFLQVRVGQKPQPCA*HVTSLA
Trigger: AGCTAGAGACGTTACGTGCCATGCACAAGGCTGTGG...CTTCTGACCGACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCACGGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGGGAACTGGCTTGGAATaGGACCAGCGCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLGTGLE*DQRFLP
Trigger: AGGGAGGAAGCGCTGGTCTCATTCCAAGCCAGTTCC...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp ATGCTCTCTGAATCCGTGCACTTTCATCCACTGTTTTCTTCAAGTCAGAGTCGGATCAGTAAACCCAGCTaGTTGGGACCCACTGTGGTT +
Preference number: 4 (lower is better)
Translates to: MLSESVHFHPLFSSSQSRISKPS*LGPTVV
Trigger: AACCACAGTGGGTCCCAATCAGCTGGGTTTACTGAT...CCGACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCACGGATTCAGAGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR TCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGCTGAAATGTGGACACTaGCCTATCCACAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVLKCGH*PIHKEP
Trigger: GGGCTCCTTGTGGATAGGTCAGTGTCCACATTTCAG...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCCGAGCAGCCCCATCTaGAAACTCGTGGCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLPSSPI*KLVARS
Trigger: ACTACGAGCCACGAGTTTGCAGATGGGGCTGCTCGG...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGTCAGTGCTTGTGGGTTaGCATCCAGAATGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVSVLVG*HPECKS
Trigger: GGACTTGCATTCTGGATGTCAACCCACAAGCACTGA...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACTCTCTCAGTCTGCATaGCCTTGCTTCCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQLSQSA*PCFQPQ
Trigger: CTGGGGCTGGAAGCAAGGTCATGCAGACTGAGAGAG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGCCCTGGCCAACATGGTaGAACCCCATCTGTACTAAA +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVPWPTW*NPICTK
Trigger: TTTAGTACAGATGGGGTTTCACCATGTTGGCCAGGG...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGAGACCTTCCACCAGCTaGAACTGTATCTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVRPSTS*NCIFGA
Trigger: AGCCCCAAAGATACAGTTTCAGCTGGTGGAAGGTCT...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGTTTTCCAAGACTTGCTaGATTGCGGCTCGCACCTCA +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVFSKTC*IAARTS
Trigger: TGAGGTGCGAGCCGCAATGCAGCAAGTCTTGGAAAA...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp TGCACTTTCATCCACTGTTTTCTTCAAGTCAGAGTCGGTCAGAAGCTTGGTAGTGTAAACCCAGCTGATTaGGACCCACTGTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: CTFIHCFLQVRVGQKLGSVNPAD*DPLWFH
Trigger: ATGGAACCACAGTGGGTCCCAATCAGCTGGGTTTAC...ACTACCAAGCTTCTGACCGACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
3UTR CAA 72 bp ACCTATCCACAAGGAGCCCTCAGGCACATTAATACGTaGGCACATCATGTTTCCCAAAAGCACATGCATGTG +
Preference number: 4 (lower is better)
Translates to: TYPQGALRHINT*AHHVSQKHMHV
Trigger: CACATGCATGTGCTTTTGGGAAACATGATGTGCCAACGTATTAATGTGCCTGAGGGCTCCTTGTGGATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp ATGCTCTCTGAATCCGTGCACTTTCATCCACTGTTTTCTTCAAGTCAGAGTCGGCTTCGGCCTACACCTTaGGCTCCTATCAATACTAAT +
Preference number: 4 (lower is better)
Translates to: MLSESVHFHPLFSSSQSRLRPTP*APINTN
Trigger: ATTAGTATTGATAGGAGCTCAAGGTGTAGGCCGAAG...CCGACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCACGGATTCAGAGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR TCA 90 bp CTAGTGGGATTCAATACTATGAACCTGTTTTTCAAGCTTCTTCGGCCTACACCTTCAGTGCTTGTGGGTTaGCATCCAGAATGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LVGFNTMNLFFKLLRPTPSVLVG*HPECKS
Trigger: GGACTTGCATTCTGGATGTCAACCCACAAGCACTGA...AGGTGTAGGCCGAAGAAGCTTGAAAAACAGGTTCATAGTATTGAATCCCACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR GCA 90 bp CTAGTGGGATTCAATACTATGAACCTGTTTTTCAAGCTTCTTCGGCCTACACCTCTTGGTAGTGATTCCTaGATCCACCACAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LVGFNTMNLFFKLLRPTPLGSDS*IHHSLV
Trigger: CACAAGGCTGTGGTGGATGCAGGAATCACTACCAAG...AGGTGTAGGCCGAAGAAGCTTGAAAAACAGGTTCATAGTATTGAATCCCACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGAAATGTCACACCCAGTaGTTCCCCAGCTCTTTTGTG +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVKCHTQ*FPSSFV
Trigger: CACAAAAGAGCTGGGGAACCACTGGGTGTGACATTT...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCCACAGCCTTGTGCATaGCACGTAACGTCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLPQPCA*HVTSLA
Trigger: AGCTAGAGACGTTACGTGCCATGCACAAGGCTGTGG...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTGGAACTGGCTTGGAATaGGACCAGCGCTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAGTGLE*DQRFLP
Trigger: AGGGAGGAAGCGCTGGTCTCATTCCAAGCCAGTTCC...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTCTCTCTCAGTCTGCATaGCCTTGCTTCCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRILSQSA*PCFQPQ
Trigger: CTGGGGCTGGAAGCAAGGTCATGCAGACTGAGAGAG...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTCCGAGCAGCCCCATCTaGAAACTCGTGGCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIPSSPI*KLVARS
Trigger: ACTACGAGCCACGAGTTTGCAGATGGGGCTGCTCGG...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAATCCACCACAGCCTTGTaGATGGCACGTAACGTCTCT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQSTTAL*MARNVS
Trigger: AGAGACGTTACGTGCCATGCACAAGGCTGTGGTGGA...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp ATCAAAATAGTGGTTGTATGCTCTCTGAATCCGTGCACTTTCATCCACTGTTTTTCCACCACAGCCTTGTaGATGGCACGTAACGTCTCT +
Preference number: 4 (lower is better)
Translates to: IKIVVVCSLNPCTFIHCFSTTAL*MARNVS
Trigger: AGAGACGTTACGTGCCATGCACAAGGCTGTGGTGGA...AAAACAGTGGATGAAAGTGCACGGATTCAGAGAGCATACAACCACTATTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR GCA 90 bp CTGAATCCGTGCACTTTCATCCACTGTTTTCTTCAAGTCAGAGTCGGTCAGAAGGTCATCCTCTGCAACTaGATTTCTGGTTGTGAGATA +
Preference number: 4 (lower is better)
Translates to: LNPCTFIHCFLQVRVGQKVILCN*ISGCEI
Trigger: TATCTCACAACCAGAAATGCAGTTGCAGAGGATGAC...CTTCTGACCGACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCACGGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGGATGCCACAATATCATaGGCCTCCAACAGTGACTGG +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLDATIS*ASNSDW
Trigger: CCAGTCACTGTTGGAGGCCCATGATATTGTGGCATC...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTTCTCTTCCAGGAACTaGCTTGGAATGAGACCAGCG +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLFSSRN*LGMRPA
Trigger: CGCTGGTCTCATTCCAAGCCAGTTCCTGGAAGAGAA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGGTAAACCCAGCTGATTaGGACCCACTGTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLVNPAD*DPLWFH
Trigger: ATGGAACCACAGTGGGTCCCAATCAGCTGGGTTTAC...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGGGAAGTGAGGTTCTTTaGGTATACCAACCAATTCTG +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVGSEVL*VYQPIL
Trigger: CAGAATTGGTTGGTATACTCAAAGAACCTCACTTCC...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGTCCCCAGCTCTTTTGTaGATACCAAGAATACGAATG +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVSPALL*IPRIRM
Trigger: CATTCGTATTCTTGGTATTCACAAAAGAGCTGGGGA...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTTCAGTGCTTGTGGGTTaGCATCCAGAATGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSSVLVG*HPECKS
Trigger: GGACTTGCATTCTGGATGTCAACCCACAAGCACTGA...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp ATGCTCTCTGAATCCGTGCACTTTCATCCACTGTTTTCTTCAAGTCAGAGTCGGATAGGGCATAAACTCTaGTGTCCTCAATACTTTCAG +
Preference number: 4 (lower is better)
Translates to: MLSESVHFHPLFSSSQSRIGHKL*CPQYFQ
Trigger: CTGAAAGTATTGAGGACATCAGAGTTTATGCCCTAT...CCGACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCACGGATTCAGAGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR TCA 90 bp GGCACCGTAGTTCCAAATCTAGTGGGATTCAATACTATGAACCTGTTTTTCAAGTGGTTGTATGCTCTCTaGATCCGTGCACTTTCATCC +
Preference number: 4 (lower is better)
Translates to: GTVVPNLVGFNTMNLFFKWLYAL*IRALSS
Trigger: GGATGAAAGTGCACGGATTCAGAGAGCATACAACCA...CTTGAAAAACAGGTTCATAGTATTGAATCCCACTAGATTTGGAACTACGGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR TCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTTCATGCCCTGAGTGCTaGAATGTGGACACTGACCTA +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSSCPEC*NVDTDL
Trigger: TAGGTCAGTGTCCACATTTCAGCACTCAGGGCATGA...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGATGAACAATGGAATCTaGGCTGGTACCTTCTTACAG +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVMNNGI*AGTFLQ
Trigger: CTGTAAGAAGGTACCAGCTCAGATTCCATTGTTCAT...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396475.6
CDS-3UTR GCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGTTTACATGGCTAGCCTaGCACCAATTTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVFTWLA*HQFGSS
Trigger: AGAAGATCCAAATTGGTGGCAGGCTAGCCATGTAAA...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACTTGGTAGTGATTCCTaGATCCACCACAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQLGSDS*IHHSLV
Trigger: CACAAGGCTGTGGTGGATGCAGGAATCACTACCAAG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp ATGCTCTCTGAATCCGTGCACTTTCATCCACTGTTTTCTTCAAGTCAGAGTCGGAAAATAGTGGTTGTATaGTCTCTGAATCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: MLSESVHFHPLFSSSQSRKIVVV*SLNPCT
Trigger: AGTGCACGGATTCAGAGAGCATACAACCACTATTTT...CCGACTCTGACTTGAAGAAAACAGTGGATGAAAGTGCACGGATTCAGAGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR GCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTGCCCCCGCAGAGCACTaGTCATTCCTGCAGATTCAT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAAPAEH*SFLQIH
Trigger: ATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGC...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTCCATCTGCAAACTCGTaGCTCGTAGTTGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSPSANS*LVVENW
Trigger: CCAGTTCTCAACTACGAGCCACGAGTTTGCAGATGG...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTGATGCCACAATATCATaGGCCTCCAACAGTGACTGG +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSDATIS*ASNSDW
Trigger: CCAGTCACTGTTGGAGGCCCATGATATTGTGGCATC...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTCTATCATTCCCCCATaGAGGATTCGGGCAATTACC +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLSIIPP*RIRAIT
Trigger: GGTAATTGCCCGAATCCTCCATGGGGGAATGATAGA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGGATTGGGACCCACTGTaGTTCCATTCTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLDWDPL*FHSQFL
Trigger: GAGAAACTGAGAATGGAACCACAGTGGGTCCCAATC...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGTAAACCCAGCTGATTaGGACCCACTGTGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQVNPAD*DPLWFH
Trigger: ATGGAACCACAGTGGGTCCCAATCAGCTGGGTTTAC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGGTAATCTCAATTACTTaGGAGGCTGAGGCACGAGAG +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLVISIT*EAEARE
Trigger: CTCTCGTGCCTCAGCCTCCCAAGTAATTGAGATTAC...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGTCAGAATTAGGATCTTaGCCAGTACCCTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVSELGS*PVPCLY
Trigger: GTAAAGACAGGGTACTGGCCAAGATCCTAATTCTGA...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTTGGTTGTATGCTCTCTaGATCCGTGCACTTTCATCC +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSWLYAL*IRALSS
Trigger: GGATGAAAGTGCACGGATTCAGAGAGCATACAACCA...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGCATAGGGCATCACCTTaGTACTGTGCTTTAATTCAT +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVHRASP*YCALIH
Trigger: ATGAATTAAAGCACAGTATCAAGGTGATGCCCTATG...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTGGCTCTCTAGCCTGTaGTTTCTGGATAATGGAGTA +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLWLSSL*FLDNGV
Trigger: TACTCCATTATCCAGAAATCACAGGCTAGAGAGCCA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAACAGTAGGGCTGCAGTaGTTTCAGGTATGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQTVGLQ*FQVCSD
Trigger: ATCACTGCATACCTGAAATCACTGCAGCCCTACTGT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTTCCACCACAGCCTTGTaGATGGCACGTAACGTCTCT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLASTTAL*MARNVS
Trigger: AGAGACGTTACGTGCCATGCACAAGGCTGTGGTGGA...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGAAAATAGTGGTTGTATaGTCTCTGAATCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVKIVVV*SLNPCT
Trigger: AGTGCACGGATTCAGAGAGCATACAACCACTATTTT...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGACAAAAACCTCCAACTaGAAACTTAGAGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVTKTSN*KLRGIS
Trigger: AGAGATGCCTCTAAGTTTGCAGTTGGAGGTTTTTGT...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTTCTATCATTCCCCCATaGAGGATTCGGGCAATTACC +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSSIIPP*RIRAIT
Trigger: GGTAATTGCCCGAATCCTCCATGGGGGAATGATAGA...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACCTCCCTCTTTTACATaGCTAGCCTGCCACCAATTT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQPPSFT*LACHQF
Trigger: AAATTGGTGGCAGGCTAGCCATGTAAAAGAGGGAGG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGATTGGGACCCACTGTaGTTCCATTCTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQDWDPL*FHSQFL
Trigger: GAGAAACTGAGAATGGAACCACAGTGGGTCCCAATC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp AATACTAATGTTTTTCTCTGGAAGGGAGGCATTTTGGCTACCTCCTCATATATCGATTGGGACCCACTGTaGTTCCATTCTCAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: NTNVFLWKGGILATSSYIDWDPL*FHSQFL
Trigger: GAGAAACTGAGAATGGAACCACAGTGGGTCCCAATC...GATATATGAGGAGGTAGCCAAAATGCCTCCCTTCCAGAGAAAAACATTAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGTAATCTCAATTACTTaGGAGGCTGAGGCACGAGAG +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQVISIT*EAEARE
Trigger: CTCTCGTGCCTCAGCCTCCCAAGTAATTGAGATTAC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTCAGCAGCCAGGTGTCTaGCACCTAACACCAGACAAA +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIQQPGV*HLTPDK
Trigger: TTTGTCTGGTGTTAGGTGCCAGACACCTGGCTGCTG...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTCAGCAGCCAGGTGTCTaGCACCTAACACCAGACAAA +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAQQPGV*HLTPDK
Trigger: TTTGTCTGGTGTTAGGTGCCAGACACCTGGCTGCTG...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGCTAGCCTGTGATTTCTaGATAATGGAGTACTGTTTC +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVLACDF*IMEYCF
Trigger: GAAACAGTACTCCATTATCCAGAAATCACAGGCTAG...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGGAGCTCAACATAACATaGAGAAATTGCACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVELNIT*RNCTCC
Trigger: GCAACAAGTGCAATTTCTCCATGTTATGTTGAGCTC...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CAA 72 bp CAGAGCACTGCTCATTCCTGCAGATTCATTTGGGACTaGGGTTTCAAGTTCAATGATTCTTCATTGAGATAC +
Preference number: 4 (lower is better)
Translates to: QSTAHSCRFIWD*GFKFNDSSLRY
Trigger: GTATCTCAATGAAGAATCATTGAACTTGAAACCCAAGTCCCAAATGAATCTGCAGGAATGAGCAGTGCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CAA 72 bp TCGAAGATCACACAGTCAGAAGTCAGAATTAGGATCTaGGCCAGTACCCTGTCTTTACTTTTATCACTAGAG +
Preference number: 4 (lower is better)
Translates to: SKITQSEVRIRI*ASTLSLLLSLE
Trigger: CTCTAGTGATAAAAGTAAAGACAGGGTACTGGCCAAGATCCTAATTCTGACTTCTGACTGTGTGATCTTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTATGGGCCTCCAACAGTaGCTGGAAGTGAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAMGLQQ*LEVRFF
Trigger: AAAGAACCTCACTTCCAGTCACTGTTGGAGGCCCAT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACTTCGGCCTACACCTTaGGCTCCTATCAATACTAAT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQLRPTP*APINTN
Trigger: ATTAGTATTGATAGGAGCTCAAGGTGTAGGCCGAAG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp GGCACCGTAGTTCCAAATCTAGTGGGATTCAATACTATGAACCTGTTTTTCAAGTTCCATCTCAGATCGTaGCACAAACTTATATGCCTG +
Preference number: 4 (lower is better)
Translates to: GTVVPNLVGFNTMNLFFKFHLRS*HKLICL
Trigger: CAGGCATATAAGTTTGTGTCACGATCTGAGATGGAA...CTTGAAAAACAGGTTCATAGTATTGAATCCCACTAGATTTGGAACTACGGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR TCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTATCAGTAAACCCAGCTaGTTGGGACCCACTGTGGTT +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIISKPS*LGPTVV
Trigger: AACCACAGTGGGTCCCAATCAGCTGGGTTTACTGAT...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTATCAGTAAACCCAGCTaGTTGGGACCCACTGTGGTT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAISKPS*LGPTVV
Trigger: AACCACAGTGGGTCCCAATCAGCTGGGTTTACTGAT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTACGGGCATCTAGACTaGAATGAACTAAACTGCATC +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLYGHLD*NELNCI
Trigger: GATGCAGTTTAGTTCATTTCAGTCTAGATGCCCGTA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTTGTACAGTCATGCCCTaGGTGCTGAAATGTGGACAC +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRICTVMP*VLKCGH
Trigger: GTGTCCACATTTCAGCACTCAGGGCATGACTGTACA...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGATTTTGTTTGATTTGTaGGTGGTCTGGTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLILFDL*VVWLAA
Trigger: TGCTGCCAACCAGACCACTCACAAATCAAACAAAAT...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTTTAAAGTAGCAAAATaGTTTAGTCCGGCTCGCACC +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLFKVAK*FSPART
Trigger: GGTGCGAGCCGGACTAAATCATTTTGCTACTTTAAA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396475.6
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGGAAGGGAGGCATTTTaGCTACCTCCTCATATATCT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQGREAF*LPPHIS
Trigger: AGATATATGAGGAGGTAGCCAAAATGCCTCCCTTCC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACTGAGTGCTGAAATGTaGACACTGACCTATCCACAA +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQLSAEM*TLTYPQ
Trigger: TTGTGGATAGGTCAGTGTCCACATTTCAGCACTCAG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAATGTTTGATTTGTGAGTaGTCTGGTTGGCAGCAAGGA +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQCLICE*SGWQQG
Trigger: TCCTTGCTGCCAACCAGACCACTCACAAATCAAACA...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGGCTATGCCTGAAATCTaGTTCTACCTGAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLAMPEI*FYLKRW
Trigger: CCATCTTTTCAGGTAGAACCAGATTTCAGGCATAGC...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGGAAGTGAGGTTCTTTaGGTATACCAACCAATTCTG +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQGSEVL*VYQPIL
Trigger: CAGAATTGGTTGGTATACTCAAAGAACCTCACTTCC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAATCCCCAGCTCTTTTGTaGATACCAAGAATACGAATG +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQSPALL*IPRIRM
Trigger: CATTCGTATTCTTGGTATTCACAAAAGAGCTGGGGA...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAATTCCATCTCAGATCGTaGCACAAACTTATATGCCTG +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQFHLRS*HKLICL
Trigger: CAGGCATATAAGTTTGTGTCACGATCTGAGATGGAA...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGATAGGGCATAAACTCTaGTGTCCTCAATACTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLIGHKL*CPQYFQ
Trigger: CTGAAAGTATTGAGGACATCAGAGTTTATGCCCTAT...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTTGGTTGTATGCTCTCTaGATCCGTGCACTTTCATCC +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAWLYAL*IRALSS
Trigger: GGATGAAAGTGCACGGATTCAGAGAGCATACAACCA...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAAAATACAGATGTAGCTaGGCTATGCCTGAAATCTGG +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQKYRCS*AMPEIW
Trigger: CCAGATTTCAGGCATAGCTCAGCTACATCTGTATTT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGTATACCAACCAATTCTaGCACATTTTCATCCACATT +
Preference number: 4 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVYTNQF*HIFIHI
Trigger: AATGTGGATGAAAATGTGGCAGAATTGGTTGGTATA...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAATGCTCTCTGAATCCGTaGACTTTCATCCACTGTTTT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQCSLNP*TFIHCF
Trigger: AAAACAGTGGATGAAAGTGCACGGATTCAGAGAGCA...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTTTAAAGAGGCTCCATaGTGCAGCATGAAAGTACAT +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLFKEAP*CSMKVH
Trigger: ATGTACTTTCATGCTGCAGCATGGAGCCTCTTTAAA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTCCTCCCTCTTTTACATaGCTAGCCTGCCACCAATTT +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIPPSFT*LACHQF
Trigger: AAATTGGTGGCAGGCTAGCCATGTAAAAGAGGGAGG...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAATACTTTCAGTGCTTGTaGGTTGACATCCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQYFQCL*VDIQNA
Trigger: TGCATTCTGGATGTCAACCCACAAGCACTGAAAGTA...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp TTTCCAGCTTTAATATCTGCTTCCATCTCAGATCGTGACACAAACTTATATGCCTACTTTCAGTGCTTGTaGGTTGACATCCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: FPALISASISDRDTNLYAYFQCL*VDIQNA
Trigger: TGCATTCTGGATGTCAACCCACAAGCACTGAAAGTA...GGCATATAAGTTTGTGTCACGATCTGAGATGGAAGCAGATATTAAAGCTGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGGTTGTTCAATGGGTTTaGTTCTCAACACAACAGACA +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLVVQWV*FSTQQT
Trigger: TGTCTGTTGTGTTGAGAACCAAACCCATTGAACAAC...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTAAAAAGTACACTTCTTaGCTAGGTGCAGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSKKYTS*LGAVAH
Trigger: ATGAGCCACTGCACCTAGCCAAGAAGTGTACTTTTT...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAATCCTGCAGATTCATTTaGGACTTGGGTTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQSCRFI*DLGFKF
Trigger: GAACTTGAAACCCAAGTCCCAAATGAATCTGCAGGA...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTTGTGAGTGGTCTGGTTaGCAGCAAGGATTTGCTAAG +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRICEWSG*QQGFAK
Trigger: CTTAGCAAATCCTTGCTGCCAACCAGACCACTCACA...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTAAGATCAGAGTCTTCTaGTGTAACCGAGTACTGGAT +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSKIRVF*CNRVLD
Trigger: ATCCAGTACTCGGTTACACCAGAAGACTCTGATCTT...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
3UTR CAA 72 bp ATAGGCTCCAACAGAGCTCAACATAACATGGAGAAATaGCACTTGTTGCTGAATACTAGTGCTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: IGSNRAQHNMEK*HLLLNTSAHSS
Trigger: AGAAGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGCTCTGTTGGAGCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGATGAGCCTTAGCAAGTaGTTTTACAATAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLMSLSK*FYNRIL
Trigger: GAGAATCCTATTGTAAAATCACTTGCTAAGGCTCAT...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACCAAGTTATTGTCACTaGCAGCTTCTAGTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQPSYCH*QLLVWN
Trigger: ATTCCAAACTAGAAGCTGTCAGTGACAATAACTTGG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTATTATATCTCCCACATaGAGTAGACCTTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSIISPT*SRPCRS
Trigger: AGATCGACAAGGTCTACTTCATGTGGGAGATATAAT...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTTCACAAATACCTGTTaGGGAGTAATGGTATCTCTA +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLFTNTC*GVMVSL
Trigger: TAGAGATACCATTACTCCTCAACAGGTATTTGTGAA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTGGGATTCAATACTATaGACCTGTTTTTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLWDSIL*TCFSSF
Trigger: GAAGCTTGAAAAACAGGTTCATAGTATTGAATCCCA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGAATGAGCTGCATCTCTaGGTATGTTTTAGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLNELHL*VCFRKN
Trigger: ATTCTTCCTAAAACATACTCAGAGATGCAGCTCATT...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGAACTGGAAGAATTCCTaGAAAGTATTCACCATTCAC +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLNWKNS*KVFTIH
Trigger: GTGAATGGTGAATACTTTTCAGGAATTCTTCCAGTT...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAATAAAAGGGACTTTCTaGTTAGGACTAAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQIKGTF*LGLREQ
Trigger: CTGCTCTCTTAGTCCTAATCAGAAAGTCCCTTTTAT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTGATGTAGCTGAGCTATaGCTGAAATCTGGTTCTACC +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIDVAEL*LKSGST
Trigger: GGTAGAACCAGATTTCAGGCATAGCTCAGCTACATC...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGTTGTTCAATGGGTTTaGTTCTCAACACAACAGACA +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQVVQWV*FSTQQT
Trigger: TGTCTGTTGTGTTGAGAACCAAACCCATTGAACAAC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTGGCACATTAATACGTTaGCACATCATGTTTCCCAAA +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSGTLIR*HIMFPK
Trigger: TTTGGGAAACATGATGTGCCAACGTATTAATGTGCC...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTGGTGTAACCGAGTACTaGATTGCTTGCTTACATTTT +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSGVTEY*IACLHF
Trigger: AAAATGTAAGCAAGCAATCCAGTACTCGGTTACACC...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACAATGGAATCTGAGCTaGTACCTTCTTACAGAAATC +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQQWNLS*YLLTEI
Trigger: GATTTCTGTAAGAAGGTACCAGCTCAGATTCCATTG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396475.6
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAAATGATGAACAATaGAATCTGAGCTGGTACCTT +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLQNDEQ*NLSWYL
Trigger: AAGGTACCAGCTCAGATTCCATTGTTCATCATTTTG...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396475.6
3UTR CAA 72 bp AACAGAGCTCAACATAACATGGAGAAATTGCACTTGTaGCTGAATACTAGTGCTCATTCTTCTACAACAGAG +
Preference number: 4 (lower is better)
Translates to: NRAQHNMEKLHL*LNTSAHSSTTE
Trigger: CTCTGTTGTAGAAGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGCTCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAATGGGATTCAATACTATaGACCTGTTTTTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQWDSIL*TCFSSF
Trigger: GAAGCTTGAAAAACAGGTTCATAGTATTGAATCCCA...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp AATACTAATGTTTTTCTCTGGAAGGGAGGCATTTTGGCTACCTCCTCATATATCTGGGATTCAATACTATaGACCTGTTTTTCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: NTNVFLWKGGILATSSYIWDSIL*TCFSSF
Trigger: GAAGCTTGAAAAACAGGTTCATAGTATTGAATCCCA...GATATATGAGGAGGTAGCCAAAATGCCTCCCTTCCAGAGAAAAACATTAGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR TCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTTTCCATCTCAGATCGTaGCACAAACTTATATGCCTG +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIFHLRS*HKLICL
Trigger: CAGGCATATAAGTTTGTGTCACGATCTGAGATGGAA...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAAATGAGCTGCATCTCTaGGTATGTTTTAGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQNELHL*VCFRKN
Trigger: ATTCTTCCTAAAACATACTCAGAGATGCAGCTCATT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAAAGTTCACATTTCCTTaGTCACAGCTATACTCTCAT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQKFTFP*SQLYSH
Trigger: ATGAGAGTATAGCTGTGATCAAGGAAATGTGAACTT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTGAGAACTATCCCTTCTaGTCGACTTTTGTATGTGGA +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIENYPF*STFVCG
Trigger: TCCACATACAAAAGTCGATCAGAAGGGATAGTTCTC...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTTGGCTTGCTGTTGGCTaGAGTACAATAAAGACATCT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAWLAVG*STIKTS
Trigger: AGATGTCTTTATTGTACTTCAGCCAACAGCAAGCCA...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp TTTCCAGCTTTAATATCTGCTTCCATCTCAGATCGTGACACAAACTTATATGCCAATTGCCAACTCCTTTaGTTAAGCCTCCAGAAATTT +
Preference number: 4 (lower is better)
Translates to: FPALISASISDRDTNLYANCQLL*LSLQKF
Trigger: AAATTTCTGGAGGCTTAATCAAAGGAGTTGGCAATT...GGCATATAAGTTTGTGTCACGATCTGAGATGGAAGCAGATATTAAAGCTGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR GCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTTGCTCTCTGAATCCGTaGACTTTCATCCACTGTTTT +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRICSLNP*TFIHCF
Trigger: AAAACAGTGGATGAAAGTGCACGGATTCAGAGAGCA...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp GTAGTTCCAAATCTAGTGGGATTCAATACTATGAACCTGTTTTTCAAGCTTCTTTGCTCTCTGAATCCGTaGACTTTCATCCACTGTTTT +
Preference number: 4 (lower is better)
Translates to: VVPNLVGFNTMNLFFKLLCSLNP*TFIHCF
Trigger: AAAACAGTGGATGAAAGTGCACGGATTCAGAGAGCA...AAGAAGCTTGAAAAACAGGTTCATAGTATTGAATCCCACTAGATTTGGAACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR GCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACAAGACTTGCTGCATTaGAAAATGATGAACAATGGA +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQQDLLH*KMMNNG
Trigger: TCCATTGTTCATCATTTTGCAATGCAGCAAGTCTTG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396475.6
CDS-3UTR CCA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTACCAAGAATACGAATaGCATCTACTGGTAATAACT +
Preference number: 4 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLYQEYE*HLLVIT
Trigger: AGTTATTACCAGTAGATGCCATTCGTATTCTTGGTA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTGAAGAATCTCTCCTTTaGAAAACTTCAATCCTGCTT +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSEESLL*KTSILL
Trigger: AAGCAGGATTGAAGTTTTCCAAAGGAGAGATTCTTC...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTAGCCTGCCACCAATTTaGATCTTCTCTATTTACAAT +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSSLPPI*IFSIYN
Trigger: ATTGTAAATAGAGAAGATCCAAATTGGTGGCAGGCT...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAAGCCTGCCACCAATTTaGATCTTCTCTATTTACAAT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQSLPPI*IFSIYN
Trigger: ATTGTAAATAGAGAAGATCCAAATTGGTGGCAGGCT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAACAAACTTATATGCCTaGCCATCTTTTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQTNLYA*PSFSSS
Trigger: GGAAGATGAAAAAGATGGCCAGGCATATAAGTTTGT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTTACTTTCAGTGCTTGTaGGTTGACATCCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAYFQCL*VDIQNA
Trigger: TGCATTCTGGATGTCAACCCACAAGCACTGAAAGTA...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGGCACATCACCTCTATaGGTATTTGTACATTTGAAA +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQGTSPL*VFVHLK
Trigger: TTTCAAATGTACAAATACCCATAGAGGTGATGTGCC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTATTATATCTCCCACATaGAGTAGACCTTGTCGATCT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAIISPT*SRPCRS
Trigger: AGATCGACAAGGTCTACTTCATGTGGGAGATATAAT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR TCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTATAGGGCATAAACTCTaGTGTCCTCAATACTTTCAG +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAIGHKL*CPQYFQ
Trigger: CTGAAAGTATTGAGGACATCAGAGTTTATGCCCTAT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAATGACGATCAAATTCTaGATTTCTGGTTGTGAGATA +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQMTIKF*ISGCEI
Trigger: TATCTCACAACCAGAAATGCAGAATTTGATCGTCAT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTAAAATAGTGGTTGTATaGTCTCTGAATCCGTGCACT +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIKIVVV*SLNPCT
Trigger: AGTGCACGGATTCAGAGAGCATACAACCACTATTTT...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACTTCAAGTGTCATTTTaGTGTAAGGTTTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQLQVSF*CKVLQD
Trigger: ATCCTGTAAAACCTTACAGCAAAATGACACTTGAAG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTACAAAAACCTCCAACTaGAAACTTAGAGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLATKTSN*KLRGIS
Trigger: AGAGATGCCTCTAAGTTTGCAGTTGGAGGTTTTTGT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAATACCAAGAATACGAATaGCATCTACTGGTAATAACT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQYQEYE*HLLVIT
Trigger: AGTTATTACCAGTAGATGCCATTCGTATTCTTGGTA...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp ACCGTAGTTCCAAATCTAGTGGGATTCAATACTATGAACCTGTTTTTCAAGCTTACAAACTTATATGCCTaGCCATCTTTTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: TVVPNLVGFNTMNLFFKLTNLYA*PSFSSS
Trigger: GGAAGATGAAAAAGATGGCCAGGCATATAAGTTTGT...AAGCTTGAAAAACAGGTTCATAGTATTGAATCCCACTAGATTTGGAACTACGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACTGTATAAATTAGAATaGATAGCCATACATCTCCGA +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQLYKLE*IAIHLR
Trigger: TCGGAGATGTATGGCTATCCATTCTAATTTATACAG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGTCATTGGGATATTATaGTCAAAGCAGTTAGTATCT +
Preference number: 4 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQVIGIL*SKQLVS
Trigger: AGATACTAACTGCTTTGACCATAATATCCCAATGAC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTTTTTACCTAACTCTATaGCTATCCACCTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSFYLTL*LSTLKI
Trigger: GATTTTCAAGGTGGATAGCCATAGAGTTAGGTAAAA...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTAGTGTATTGCCAAAGTaGTGTGAACCATGCTTACTT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLASVLPK*CEPCLL
Trigger: AAGTAAGCATGGTTCACACCACTTTGGCAATACACT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTCAGTCACTGGGATCATaGCACTTGTTATACATAAAA +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIQSLGS*HLLYIK
Trigger: TTTTATGTATAACAAGTGTCATGATCCCAGTGACTG...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTACAGATGTTATTACATaGATTCTCACAGCAAACCTC +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLATDVIT*ILTANL
Trigger: GAGGTTTGCTGTGAGAATTCATGTAATAACATCTGT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTTGCATTATCAGCCAATaGCTGAGAAGCAATTACAAA +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRICIISQ*LRSNYK
Trigger: TTTGTAATTGCTTCTCAGTCATTGGCTGATAATGCA...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTAATCACTCAATCTTCTaGTTGGTGGCATTTACCTTA +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLANHSIF*LVAFTL
Trigger: TAAGGTAAATGCCACCAATCAGAAGATTGAGTGATT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR TCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTAATTGCACTTGTTGCTaGATACTAGTGCTCATTCTT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLANCTCC*ILVLIL
Trigger: AAGAATGAGCACTAGTATTCAGCAACAAGTGCAATT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTAACCTCAAAAGAGAGTaGAAGGTATTGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLANLKRE*KVLLFN
Trigger: ATTGAAGAGCAATACCTTGCACTCTCTTTTGAGGTT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTGAAGAATCTCTCCTTTaGAAAACTTCAATCCTGCTT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAEESLL*KTSILL
Trigger: AAGCAGGATTGAAGTTTTCCAAAGGAGAGATTCTTC...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTACAAACTTATATGCCTaGCCATCTTTTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLATNLYA*PSFSSS
Trigger: GGAAGATGAAAAAGATGGCCAGGCATATAAGTTTGT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
3UTR CAA 72 bp ATGTCTTCAAGAATTTCATTGACTAATTCCAAGTTATaGTCACTGACAGCTTCTAGTTTGGAATCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: MSSRISLTNSKL*SLTASSLESSS
Trigger: GCTAGAAGATTCCAAACTAGAAGCTGTCAGTGACAATAACTTGGAATTAGTCAATGAAATTCTTGAAGACAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426450.1
CDS-3UTR GCA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTTATACCAACCAATTCTaGCACATTTTCATCCACATT +
Preference number: 4 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIYTNQF*HIFIHI
Trigger: AATGTGGATGAAAATGTGGCAGAATTGGTTGGTATA...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR GCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTATGACGATCAAATTCTaGATTTCTGGTTGTGAGATA +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAMTIKF*ISGCEI
Trigger: TATCTCACAACCAGAAATGCAGAATTTGATCGTCAT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR GCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTCTTCAAGTGTCATTTTaGTGTAAGGTTTTACAGGAT +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLALQVSF*CKVLQD
Trigger: ATCCTGTAAAACCTTACAGCAAAATGACACTTGAAG...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CCA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTCTGTATAAATTAGAATaGATAGCCATACATCTCCGA +
Preference number: 4 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLALYKLE*IAIHLR
Trigger: TCGGAGATGTATGGCTATCCATTCTAATTTATACAG...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS GCA 90 bp AGACGAGGGCAGCTCCGTAAGGTTTTCCAAGACTTGCTGCATTGCTaGGGCTCGCACCTCAGCCGCCTCCGCGCCGCCGCTGCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: RRGQLRKVFQDLLHC*GSHLSRLRAAAAAA
Trigger: AGCGGCGGCAGCGGCGGCGCGGAGGCGGCTGAGGTGCGAGCCGCAGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCCTCGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432190.5
CDS GCA 90 bp AGTAGACGAGGGCAGCTCCGTAAGGTTTTCCAAGACTTGCTGCATTaGGGCTCGCACCTCAGCCGCCTCCGCGCCGCCGCTGCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: SRRGQLRKVFQDLLH*GSHLSRLRAAAAAA
Trigger: AGCGGCGGCAGCGGCGGCGCGGAGGCGGCTGAGGTGCGAGCCGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCCTCGTCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS GCA 90 bp TCTGCTCCAGTAGACGAGGGCAGCTCCGTAAGGTTTTCCAAGACTTaGTGCATTGCTGCGGCTCGCACCTCAGCCGCCTCCGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SAPVDEGSSVRFSKT*CIAAARTSAASAPP
Trigger: CGGCGGCGCGGAGGCGGCTGAGGTGCGAGCCGCAGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCCTCGTCTACTGGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432190.5
CDS GCA 90 bp ATCCGCGAGCACGATCTCAGCAGCGAACGCCCCCGCGGCAGCCTGTaGTCGGCCCACAGCCACTTTGGCCAAACAACTGGAGTCTCGTAC +
Preference number: 5 (lower is better)
Translates to: IREHDLSSERPRGSL*SAHSHFGQTTGVSY
Trigger: GTACGAGACTCCAGTTGTTTGGCCAAAGTGGCTGTGGGCCGAGCACAGGCTGCCGCGGGGGCGTTCGCTGCTGAGATCGTGCTCGCGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430180.5
CDS GCA 90 bp GCAAACTCGTGGCTCGTAGTTGAGAACTGGAAATGCGTCTCTCACTaGCCTCCGCCTCCCTCTCTCTCCTCCCCCTCCCTCGCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ANSWLVVENWKCVSH*PPPPSLSSPSLAPH
Trigger: GTGGGGAGCGAGGGAGGGGGAGGAGAGAGAGGGAGGCGGAGGGCAGTGAGAGACGCATTTCCAGTTCTCAACTACGAGCCACGAGTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432190.5
CDS GCA 90 bp GCAGCCCCATCTGCAAACTCGTGGCTCGTAGTTGAGAACTGGAAATaGGTCTCTCACTGCCCTCCGCCTCCCTCTCTCTCCTCCCCCTCC +
Preference number: 5 (lower is better)
Translates to: AAPSANSWLVVENWK*VSHCPPPPSLSSPS
Trigger: GGAGGGGGAGGAGAGAGAGGGAGGCGGAGGGCAGTGAGAGACGCATTTCCAGTTCTCAACTACGAGCCACGAGTTTGCAGATGGGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432190.5
CDS CCA 90 bp GGCCAAACAACTGGAGTCTCGTACCTCGGAAGTAGCGGCGGTAGTTaGAGAAAGCCTCCTCCCCTACCAACTCCGAGCTCGGGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: GQTTGVSYLGSSGGS*RKPPPLPTPSSGEN
Trigger: GTTCTCTCCCGAGCTCGGAGTTGGTAGGGGAGGAGGCTTTCTCCAACTACCGCCGCTACTTCCGAGGTACGAGACTCCAGTTGTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430180.5
CDS-3UTR CAA 90 bp CATCCACCACAGCCTTGTGCATGGCACGTAACGTCTCTAGCTCCGGAGCCGCAAGCAAGTCCGTCCAGTTaGGACAACCTCAAGAATAGA +
Preference number: 5 (lower is better)
Translates to: HPPQPCAWHVTSLAPEPQASPSS*DNLKNR
Trigger: TCTATTCTTGAGGTTGTCCAAACTGGACGGACTTGC...TTGCGGCTCCGGAGCTAGAGACGTTACGTGCCATGCACAAGGCTGTGGTGGATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CAA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGCCCAGGAGGCAGAGGTaGCAGCGGGCTGAGATCGCG +
Preference number: 5 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVPRRQR*QRAEIA
Trigger: CGCGATCTCAGCCCGCTGCAACCTCTGCCTCCTGGG...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp CTTCAAGTCAGAGTCGGTCAGAAGCTTGGTAGTGATTCCTGCATCCACCACAGCGAGTCGGTCAGAAGCTaGGTAGTGATTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: LQVRVGQKLGSDSCIHHSESVRS*VVIPAS
Trigger: GGATGCAGGAATCACTACCAAGCTTCTGACCGACTC...GCTGTGGTGGATGCAGGAATCACTACCAAGCTTCTGACCGACTCTGACTTGAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CAA 90 bp GGCATAAACTCTGATGTCCTCAATACTTTCAGTGCTTGTGGGTTGACATCCAGAGCATCCACCACAGCCTaGTGCATGGCACGTAACGTC +
Preference number: 5 (lower is better)
Translates to: GINSDVLNTFSACGLTSRASTTA*CMARNV
Trigger: GACGTTACGTGCCATGCACAAGGCTGTGGTGGATGC...TCTGGATGTCAACCCACAAGCACTGAAAGTATTGAGGACATCAGAGTTTATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CAA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGACCTCTGGGGCTGTTaGCCCCCGCAGAGCACTGCT +
Preference number: 5 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQDLWGC*PPQSTA
Trigger: AGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTCCTTCTGATCGACTTTaGTATGTGGAGATAAGTCAA +
Preference number: 5 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIPSDRL*YVEISQ
Trigger: TTGACTTATCTCCACATACAAAAGTCGATCAGAAGG...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp GACCTCTGGGGCTGTTTGCCCCCGCAGAGCACTGCTCATTCCTGCAGATTCATTATGGAGAAATTGCACTaGTTGCTGAATACTAGTGCT +
Preference number: 5 (lower is better)
Translates to: DLWGCLPPQSTAHSCRFIMEKLH*LLNTSA
Trigger: AGCACTAGTATTCAGCAACAAGTGCAATTTCTCCAT...AATGAATCTGCAGGAATGAGCAGTGCTCTGCGGGGGCAAACAGCCCCAGAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTCCCAGGAGGCAGAGGTaGCAGCGGGCTGAGATCGCG +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAPRRQR*QRAEIA
Trigger: CGCGATCTCAGCCCGCTGCAACCTCTGCCTCCTGGG...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGGCATCCACCACAGCCTaGTGCATGGCACGTAACGTC +
Preference number: 5 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLASTTA*CMARNV
Trigger: GACGTTACGTGCCATGCACAAGGCTGTGGTGGATGC...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGGAGTCGGTCAGAAGCTaGGTAGTGATTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVESVRS*VVIPAS
Trigger: GGATGCAGGAATCACTACCAAGCTTCTGACCGACTC...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGTGGAAGGGAGGCATTTaGGCTACCTCCTCATATATC +
Preference number: 5 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVWKGGI*ATSSYI
Trigger: GATATATGAGGAGGTAGCCAAAATGCCTCCCTTCCA...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGGAGTCGGTCAGAAGCTaGGTAGTGATTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLESVRS*VVIPAS
Trigger: GGATGCAGGAATCACTACCAAGCTTCTGACCGACTC...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTGCATCCACCACAGCCTaGTGCATGGCACGTAACGTC +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAASTTA*CMARNV
Trigger: GACGTTACGTGCCATGCACAAGGCTGTGGTGGATGC...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGCTATGGCTATCCACCTaGAAAATCAACTCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVLWLST*KINSSH
Trigger: GTGACTGGAGTTGATTTTCAAGGTGGATAGCCATAG...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTGTTCCTTCCCCTGGCTaGCTGTTGGCTGAAGTACAA +
Preference number: 5 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSVPSPG*LLAEVQ
Trigger: TTGTACTTCAGCCAACAGCAAGCCAGGGGAAGGAAC...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS TCA 90 bp TTTCCAACCTCATGGCCATTGACTTCTTTAATTATATCTCCCACATaGAGTAGACCTTGTCGATCTATCATTCCCCCATGGAGGATTCGG +
Preference number: 5 (lower is better)
Translates to: FPTSWPLTSLIISPT*SRPCRSIIPPWRIR
Trigger: CCGAATCCTCCATGGGGGAATGATAGATCGACAAGGTCTACTTCATGTGGGAGATATAATTAAAGAAGTCAATGGCCATGAGGTTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222644.10
ENST00000396475.6
ENST00000409761.5
ENST00000430180.5
ENST00000432190.5
CDS-3UTR CAA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGGCAAGTCCGTCCAGTTaGGACAACCTCAAGAATAGA +
Preference number: 5 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLASPSS*DNLKNR
Trigger: TCTATTCTTGAGGTTGTCCAAACTGGACGGACTTGC...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp GGCATAAACTCTGATGTCCTCAATACTTTCAGTGCTTGTGGGTTGACATCCAGACAATACTTTCAGTGCTaGTGGGTTGACATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: GINSDVLNTFSACGLTSRQYFQC*WVDIQN
Trigger: ATTCTGGATGTCAACCCACAAGCACTGAAAGTATTG...TCTGGATGTCAACCCACAAGCACTGAAAGTATTGAGGACATCAGAGTTTATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CAA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTAAGGTTTTCCAAGACTaGCTGCATTGCGGCTCGCAC +
Preference number: 5 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIKVFQD*LHCGSH
Trigger: GTGCGAGCCGCAATGCAGCAAGTCTTGGAAAACCTT...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGTATTCATTTCTGGGCTaGATGGAGGTGAATCATAAC +
Preference number: 5 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVYSFLG*MEVNHN
Trigger: GTTATGATTCACCTCCATCAAGCCCAGAAATGAATA...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGCTTCACAAATACCTGTaGAGGAGTAATGGTATCTCT +
Preference number: 5 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVLHKYL*RSNGIS
Trigger: AGAGATACCATTACTCCTCAACAGGTATTTGTGAAG...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGTTCAATCCTGCTTCTTaGCAAGGTATTAGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVFNPAS*QGIRLS
Trigger: TGACAACCTAATACCTTGCAAAGAAGCAGGATTGAA...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGAAGTACTGCAGTGTATaGCCAAAGTGGTGTGAACCA +
Preference number: 5 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLKYCSV*PKWCEP
Trigger: TGGTTCACACCACTTTGGCAATACACTGCAGTACTT...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTCTGACAGCTTCTAGTTaGGAATCTTCTAGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSLTASS*ESSSLS
Trigger: TGAGAGGCTAGAAGATTCCAAACTAGAAGCTGTCAG...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp TTTTCTTTTCCTTCAAAGTCCTCCCAGCTGGCGTTCCAAATGACAACTTTGGTGTTTCTCTATGGCAGTTaGCAGTTTTTCAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: FSFPSKSSQLAFQMTTLVFLYGS*QFFKGF
Trigger: AAAGCCTTTGAAAAACTGCAAACTGCCATAGAGAAA...CACCAAAGTTGTCATTTGGAACGCCAGCTGGGAGGACTTTGAAGGAAAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAGTCAGAATTAGGATCTaGGCCAGTACCCTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQVRIRI*ASTLSL
Trigger: TAAAGACAGGGTACTGGCCAAGATCCTAATTCTGAC...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCCAAGACTTGCTGCATaGCAAAATGATGAACAATGG +
Preference number: 5 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLPRLAA*QNDEQW
Trigger: CCATTGTTCATCATTTTGCAATGCAGCAAGTCTTGG...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396475.6
CDS-3UTR CAA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTTCAATCCTGCTTCTTaGCAAGGTATTAGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLFNPAS*QGIRLS
Trigger: TGACAACCTAATACCTTGCAAAGAAGCAGGATTGAA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTCAAAAAGGTCCTGAATaGTCCCAGTCTCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSQKGPE*SQSLLT
Trigger: TGTTAGAAGAGACTGGGACAATTCAGGACCTTTTTG...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTTGGAAGGGAGGCATTTaGGCTACCTCCTCATATATC +
Preference number: 5 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIWKGGI*ATSSYI
Trigger: GATATATGAGGAGGTAGCCAAAATGCCTCCCTTCCA...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp GTAGTTCCAAATCTAGTGGGATTCAATACTATGAACCTGTTTTTCAAGCTTCTTTGGAAGGGAGGCATTTaGGCTACCTCCTCATATATC +
Preference number: 5 (lower is better)
Translates to: VVPNLVGFNTMNLFFKLLWKGGI*ATSSYI
Trigger: GATATATGAGGAGGTAGCCAAAATGCCTCCCTTCCA...AAGAAGCTTGAAAAACAGGTTCATAGTATTGAATCCCACTAGATTTGGAACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CAA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACAATACTTTCAGTGCTaGTGGGTTGACATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQQYFQC*WVDIQN
Trigger: ATTCTGGATGTCAACCCACAAGCACTGAAAGTATTG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAAGTTGTTCAATGGGTTaGGTTCTCAACACAACAGAC +
Preference number: 5 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQSCSMG*VLNTTD
Trigger: GTCTGTTGTGTTGAGAACCAAACCCATTGAACAACT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTTTCCTGCAGATTCATTaGGGACTTGGGTTTCAAGTT +
Preference number: 5 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSFLQIH*GLGFQV
Trigger: AACTTGAAACCCAAGTCCCAAATGAATCTGCAGGAA...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTCTGACAGCTTCTAGTTaGGAATCTTCTAGCCTCTCA +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLALTASS*ESSSLS
Trigger: TGAGAGGCTAGAAGATTCCAAACTAGAAGCTGTCAG...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAATATTCATTTCTGGGCTaGATGGAGGTGAATCATAAC +
Preference number: 5 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQYSFLG*MEVNHN
Trigger: GTTATGATTCACCTCCATCAAGCCCAGAAATGAATA...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAACTTCACAAATACCTGTaGAGGAGTAATGGTATCTCT +
Preference number: 5 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQLHKYL*RSNGIS
Trigger: AGAGATACCATTACTCCTCAACAGGTATTTGTGAAG...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp TCCAGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGTTTCTCTATGGCAGTTaGCAGTTTTTCAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: SSPRAYCVHVKLVSIISLFLYGS*QFFKGF
Trigger: AAAGCCTTTGAAAAACTGCAAACTGCCATAGAGAAA...CAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTACAAGAAACGTGAATTaGTGTTCTGGCCATGAAATC +
Preference number: 5 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSTRNVN*CSGHEI
Trigger: GATTTCATGGCCAGAACACAAATTCACGTTTCTTGT...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTGAAGTTCACATTTCCTaGATCACAGCTATACTCTCA +
Preference number: 5 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSEVHIS*ITAILS
Trigger: TGAGAGTATAGCTGTGATCAAGGAAATGTGAACTTC...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAAAGGTTTTCCAAGACTaGCTGCATTGCAAAATGATG +
Preference number: 5 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQKVFQD*LHCKMM
Trigger: CATCATTTTGCAATGCAGCAAGTCTTGGAAAACCTT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000396475.6
CDS-3UTR CAA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAACTAATTCCAAGTTATaGTCACTGACAGCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQTNSKL*SLTASS
Trigger: ACTAGAAGCTGTCAGTGACAATAACTTGGAATTAGT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTCAAAAAGGTCCTGAATaGTCCCAGTCTCTTCTAACA +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAQKGPE*SQSLLT
Trigger: TGTTAGAAGAGACTGGGACAATTCAGGACCTTTTTG...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTCAATACTTTCAGTGCTaGTGGGTTGACATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAQYFQC*WVDIQN
Trigger: ATTCTGGATGTCAACCCACAAGCACTGAAAGTATTG...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp TGGCACCGTAGTTCCAAATCTAGTGGGATTCAATACTATGAACCTGTTTTTCAATTTCTCTATGGCAGTTaGCAGTTTTTCAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: WHRSSKSSGIQYYEPVFQFLYGS*QFFKGF
Trigger: AAAGCCTTTGAAAAACTGCAAACTGCCATAGAGAAA...TTGAAAAACAGGTTCATAGTATTGAATCCCACTAGATTTGGAACTACGGTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CAA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTAGTTGTTCAATGGGTTaGGTTCTCAACACAACAGAC +
Preference number: 5 (lower is better)
Translates to: QFTISQLPHQSYKLQIRISCSMG*VLNTTD
Trigger: GTCTGTTGTGTTGAGAACCAAACCCATTGAACAACT...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTAGGCACATTAATACGTaGGCACATCATGTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLARHINT*AHHVSQ
Trigger: TTGGGAAACATGATGTGCCAACGTATTAATGTGCCT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp GCTCAACATAACATGGAGAAATTGCACTTGTTGCTGAATACTAGTGCTCATTCTTTGCTTACATTTTGTTaGATTTGTGAGTGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: AQHNMEKLHLLLNTSAHSLLTFC*ICEWSG
Trigger: ACCAGACCACTCACAAATCAAACAAAATGTAAGCAA...AGAATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTCCATGTTATGTTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp AGCCCCAGAGCTTACTGTGTACATGTTAAATTAGTTAGCATCATATCACTGCAAAATTTTAAGACCTTTTaGGCTTCTGTGGTAGCAACA +
Preference number: 5 (lower is better)
Translates to: SPRAYCVHVKLVSIISLQNFKTF*ASVVAT
Trigger: TGTTGCTACCACAGAAGCCAAAAAGGTCTTAAAATT...TTGCAGTGATATGATGCTAACTAATTTAACATGTACACAGTAAGCTCTGGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTGGAAATGGCTGTCCTTaGTTACCAAATCCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAGNGCP*LPNPFL
Trigger: AAGAAAGGGATTTGGTAACAAAGGACAGCCATTTCC...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396475.6
CDS-3UTR CAA 90 bp TTTCCAGCTTTAATATCTGCTTCCATCTCAGATCGTGACACAAACTTATATGCCAAATTGCCAACTCCTTaGATTAAGCCTCCAGAAATT +
Preference number: 5 (lower is better)
Translates to: FPALISASISDRDTNLYAKLPTP*IKPPEI
Trigger: AATTTCTGGAGGCTTAATCAAAGGAGTTGGCAATTT...GGCATATAAGTTTGTGTCACGATCTGAGATGGAAGCAGATATTAAAGCTGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464384.2
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTGTGAATCATAACACTTaGATGCCACAATATCATGGG +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAVNHNT*MPQYHG
Trigger: CCCATGATATTGTGGCATCAAAGTGTTATGATTCAC...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTGAGAAATTGCACTTGTaGCTGAATACTAGTGCTCAT +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAEKLHL*LNTSAH
Trigger: ATGAGCACTAGTATTCAGCAACAAGTGCAATTTCTC...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS CCA 90 bp ACCAATTTGGATCTTCTCTATTTACAATCTGAAGAATCTCTCCTTTaGAAAACTTCAATCCTGCTTCTTTGCAAGGTATTAGGTTGTCAT +
Preference number: 5 (lower is better)
Translates to: TNLDLLYLQSEESLL*KTSILLLCKVLGCH
Trigger: ATGACAACCTAATACCTTGCAAAGAAGCAGGATTGAAGTTTTCCAAAGGAGAGATTCTTCAGATTGTAAATAGAGAAGATCCAAATTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222644.10
ENST00000396475.6
ENST00000409761.5
ENST00000430180.5
ENST00000472674.1
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTAGAGAGTGCAAGGTATaGCTCTTCAATTTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLARECKV*LFNFSV
Trigger: TACTGAAAAATTGAAGAGCAATACCTTGCACTCTCT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTGGTGAATGTGGGAATTaGTATAAGTCAATGCTTCTA +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAGECGN*YKSMLL
Trigger: TAGAAGCATTGACTTATACAAATTCCCACATTCACC...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222644.10
ENST00000396475.6
CDS-3UTR CAA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTAATTTCAAGTGTGTGTaGAAACATTGTCATAGGGCA +
Preference number: 5 (lower is better)
Translates to: QFTISQLPHQSYKLQIRINFKCV*KHCHRA
Trigger: TGCCCTATGACAATGTTTCAACACACACTTGAAATT...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTTTGCAGATAAACTTCTaGTGCTGCTATAATTATCCC +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLALQINF*CCYNYP
Trigger: GGGATAATTATAGCAGCACAAGAAGTTTATCTGCAA...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTTATCTAACTGTATTCTaGTTAGTACGGGCATCTAGA +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLAYLTVF*LVRASR
Trigger: TCTAGATGCCCGTACTAACAAGAATACAGTTAGATA...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTAGATTCATTTGGGACTaGGGTTTCAAGTTCAATGAT +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLARFIWD*GFKFND
Trigger: ATCATTGAACTTGAAACCCAAGTCCCAAATGAATCT...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp ATACGTAAACTGATCAGACTTTTGATGTCAGATTTAGATGGTAGTAGACTAGCTCGAGTACTGGATTGCTaGCTTACATTTTGTTTGATT +
Preference number: 5 (lower is better)
Translates to: IRKLIRLLMSDLDGSRLARVLDC*LTFCLI
Trigger: AATCAAACAAAATGTAAGCAAGCAATCCAGTACTCG...AGCTAGTCTACTACCATCTAAATCTGACATCAAAAGTCTGATCAGTTTACGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS-3UTR CAA 90 bp CAGTTCACCATATCACAGCTACCACATCAGAGTTACAAATTACAAATCAGAATTGAAACTTTAAGCAGCTaGTTCAGCTTTGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: QFTISQLPHQSYKLQIRIETLSS*FSFDFQ
Trigger: CTGAAAATCAAAGCTGAACAAGCTGCTTAAAGTTTC...AATTCTGATTTGTAATTTGTAACTCTGATGTGGTAGCTGTGATATGGTGAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS GCA 72 bp GGGCAGCTCCGTAAGGTTTTCCAAGACTTGCTGCATTaGTGCGGCTCGCACCTCAGCCGCCTCCGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: GQLRKVFQDLLH*CGSHLSRLRAA
Trigger: GGCGGCGCGGAGGCGGCTGAGGTGCGAGCCGCAGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432190.5
CDS CAA 90 bp GCAGCGAACGCCCCCGCGGCAGCCTGTGCTCGGCCCACAGCCACTTaGGCCAAACAACTGGAGTCTCGTACCTCGGAAGTAGCGGCGGTA +
Preference number: 6 (lower is better)
Translates to: AANAPAAACARPTAT*AKQLESRTSEVAAV
Trigger: TACCGCCGCTACTTCCGAGGTACGAGACTCCAGTTGTTTGGCCAAAGTGGCTGTGGGCCGAGCACAGGCTGCCGCGGGGGCGTTCGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430180.5
CDS GCA 72 bp GACGAGGGCAGCTCCGTAAGGTTTTCCAAGACTTGCTaGATTGCGGCTCGCACCTCAGCCGCCTCCGCGCCG +
Preference number: 6 (lower is better)
Translates to: DEGSSVRFSKTC*IAARTSAASAP
Trigger: CGGCGCGGAGGCGGCTGAGGTGCGAGCCGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCCTCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS GCA 72 bp CACGATCTCAGCAGCGAACGCCCCCGCGGCAGCCTGTaGTCGGCCCACAGCCACTTTGGCCAAACAACTGGA +
Preference number: 6 (lower is better)
Translates to: HDLSSERPRGSL*SAHSHFGQTTG
Trigger: TCCAGTTGTTTGGCCAAAGTGGCTGTGGGCCGAGCACAGGCTGCCGCGGGGGCGTTCGCTGCTGAGATCGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430180.5
CDS GCA 72 bp GACGAGGGCAGCTCCGTAAGGTTTTCCAAGACTTGCTaGATTGCTGCGGCTCGCACCTCAGCCGCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: DEGSSVRFSKTC*IAAARTSAASA
Trigger: CGCGGAGGCGGCTGAGGTGCGAGCCGCAGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCCTCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432190.5
CDS CAA 72 bp GCCCCCGCGGCAGCCTGTGCTCGGCCCACAGCCACTTaGGCCAAACAACTGGAGTCTCGTACCTCGGAAGTA +
Preference number: 6 (lower is better)
Translates to: APAAACARPTAT*AKQLESRTSEV
Trigger: TACTTCCGAGGTACGAGACTCCAGTTGTTTGGCCAAAGTGGCTGTGGGCCGAGCACAGGCTGCCGCGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430180.5
CDS CAA 90 bp TTCTGCTCCAGTAGACGAGGGCAGCTCCGTAAGGTTTTCCAAGACTaGCTGCATTGCTGCGGCTCGCACCTCAGCCGCCTCCGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: FCSSRRGQLRKVFQD*LHCCGSHLSRLRAA
Trigger: GGCGGCGCGGAGGCGGCTGAGGTGCGAGCCGCAGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCCTCGTCTACTGGAGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432190.5
CDS TCA 72 bp CTGACAGCTTCTAGTTTGGAATCTTCTAGCCTCTCATaGGCCGGCTCGCACCTCAGCCGCCTCCGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: LTASSLESSSLS*AGSHLSRLRAA
Trigger: GGCGGCGCGGAGGCGGCTGAGGTGCGAGCCGGCTCATGAGAGGCTAGAAGATTCCAAACTAGAAGCTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409761.5
CDS GCA 72 bp GTAGACGAGGGCAGCTCCGTAAGGTTTTCCAAGACTTaGTGCATTGCGGCTCGCACCTCAGCCGCCTCCGCG +
Preference number: 6 (lower is better)
Translates to: VDEGSSVRFSKT*CIAARTSAASA
Trigger: CGCGGAGGCGGCTGAGGTGCGAGCCGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCCTCGTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS GCA 72 bp TGGCTCGTAGTTGAGAACTGGAAATGCGTCTCTCACTaGCCTCCGCCTCCCTCTCTCTCCTCCCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: WLVVENWKCVSH*PPPPSLSSPSL
Trigger: GAGGGAGGGGGAGGAGAGAGAGGGAGGCGGAGGGCAGTGAGAGACGCATTTCCAGTTCTCAACTACGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432190.5
CDS GCA 72 bp GTAGACGAGGGCAGCTCCGTAAGGTTTTCCAAGACTTaGTGCATTGCTGCGGCTCGCACCTCAGCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: VDEGSSVRFSKT*CIAAARTSAAS
Trigger: GGAGGCGGCTGAGGTGCGAGCCGCAGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCCTCGTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432190.5
CDS CAA 72 bp AGTAGACGAGGGCAGCTCCGTAAGGTTTTCCAAGACTaGCTGCATTGCGGCTCGCACCTCAGCCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: SRRGQLRKVFQD*LHCGSHLSRLR
Trigger: GCGGAGGCGGCTGAGGTGCGAGCCGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCCTCGTCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222644.10
CDS TCA 72 bp CCGAGCAGCCCCATCTGCAAACTCGTGGCTCGTAGTTaGGAACTGGAAATGCGTCTCTCACTGCCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: PSSPICKLVARS*ELEMRLSLPSA
Trigger: GGCGGAGGGCAGTGAGAGACGCATTTCCAGTTCTCAACTACGAGCCACGAGTTTGCAGATGGGGCTGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409761.5
ENST00000432190.5
CDS CCA 72 bp CACAGGCGCCGCCGAGCAGCCCCATCTGCAAACTCGTaGCTCGTAGTTGAGAACTGGAAATGCGTCTCTCAC +
Preference number: 6 (lower is better)
Translates to: HRRRRAAPSANS*LVVENWKCVSH
Trigger: GTGAGAGACGCATTTCCAGTTCTCAACTACGAGCCACGAGTTTGCAGATGGGGCTGCTCGGCGGCGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409761.5
ENST00000432190.5
CDS CCA 72 bp ACTGGAGTCTCGTACCTCGGAAGTAGCGGCGGTAGTTaGAGAAAGCCTCCTCCCCTACCAACTCCGAGCTCG +
Preference number: 6 (lower is better)
Translates to: TGVSYLGSSGGS*RKPPPLPTPSS
Trigger: CGAGCTCGGAGTTGGTAGGGGAGGAGGCTTTCTCCAACTACCGCCGCTACTTCCGAGGTACGAGACTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430180.5
CDS CAA 72 bp AGTAGACGAGGGCAGCTCCGTAAGGTTTTCCAAGACTaGCTGCATTGCTGCGGCTCGCACCTCAGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: SRRGQLRKVFQD*LHCCGSHLSRL
Trigger: GAGGCGGCTGAGGTGCGAGCCGCAGCAATGCAGCAAGTCTTGGAAAACCTTACGGAGCTGCCCTCGTCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432190.5
CDS TCA 72 bp CATGGGCCTCCAACAGTGACTGGAAGTGAGGTTCTTTaGGTATACCAACCAATTCTGCCACATTTTCATCCA +
Preference number: 6 (lower is better)
Translates to: HGPPTVTGSEVL*VYQPILPHFHP
Trigger: TGGATGAAAATGTGGCAGAATTGGTTGGTATACTCAAAGAACCTCACTTCCAGTCACTGTTGGAGGCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222644.10
ENST00000396475.6
ENST00000409761.5
ENST00000430180.5
ENST00000432190.5
CDS CAA 90 bp AGGCCCTTAGCAAGTGATTTTACAATAGGATTCTCCATAATTCCCTaGAGGAAAATTAGGTCTATTTCTTCTGCTCCAGTAGACGAGGGC +
Preference number: 6 (lower is better)
Translates to: RPLASDFTIGFSIIP*RKIRSISSAPVDEG
Trigger: GCCCTCGTCTACTGGAGCAGAAGAAATAGACCTAATTTTCCTCAAGGGAATTATGGAGAATCCTATTGTAAAATCACTTGCTAAGGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426450.1
ENST00000625307.1
CDS TCA 72 bp TCATGGCCATTGACTTCTTTAATTATATCTCCCACATaGAGTAGACCTTGTCGATCTATCATTCCCCCATGG +
Preference number: 6 (lower is better)
Translates to: SWPLTSLIISPT*SRPCRSIIPPW
Trigger: CCATGGGGGAATGATAGATCGACAAGGTCTACTTCATGTGGGAGATATAATTAAAGAAGTCAATGGCCATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000222644.10
ENST00000396475.6
ENST00000409761.5
ENST00000430180.5
ENST00000432190.5