RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000082126

Ensembl transcript IDs: ENST00000315506.11, ENST00000359962.9, ENST00000396886.7, ENST00000409143.5, ENST00000409474.8, ENST00000409818.7, ENST00000428900.6, ENST00000447335.6, ENST00000483841.2, ENST00000486212.6, ENST00000602867.1, ENST00000620095.4

Found 557 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGGCGTCGCTGGTACCTCACCACCTCCTCGTAAGGGGCACCCACTaGACTGTAGCAGCTGCCGGTGCAGCACACACTGGCATGCAGCGG +
Preference number: 1 (lower is better)
Translates to: RASLVPHHLLVRGTH*TVAAAGAAHTGMQR
Trigger: CCGCTGCATGCCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAGGAGGTGGTGAGGTACCAGCGACGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
3UTR TCA 90 bp TCCAACACCAGAGGGTCCCATGAGCACTATGAGGCGGTACTTGTCTaGAGGGCGTCGCTGGTACCTCACCACCTCCTCGTAAGGGGCACC +
Preference number: 1 (lower is better)
Translates to: SNTRGSHEHYEAVLV*RASLVPHHLLVRGT
Trigger: GGTGCCCCTTACGAGGAGGTGGTGAGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACCCTCTGGTGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
3UTR-3UTR GCA 90 bp CCAGAGGGTCCCATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGTGTAGCAGCTGCCGGTaGAGCACACACTGGCATGCA +
Preference number: 2 (lower is better)
Translates to: PEGPMSTMRRYLSEGRRWCSSCR*STHWHA
Trigger: TGCATGCCAGTGTGTGCTGCACCGGCAGCTGCTACA...CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACCCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
3UTR-3UTR GCA 90 bp ATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGTACCTCACCACCCTGCACTGTAGCAGCTaGCGGTGCAGCACACACTGG +
Preference number: 2 (lower is better)
Translates to: MSTMRRYLSEGRRWYLTTLHCSS*RCSTHW
Trigger: CCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAG...GGTGGTGAGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
3UTR-3UTR GCA 90 bp AAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATTGCGACAAAGGCGCATaGTGCGGCGGAAGCCAGCTA +
Preference number: 2 (lower is better)
Translates to: KFNKLSSELIYSNTRGSHCDKGA*CGGSQL
Trigger: TAGCTGGCTTCCGCCGCAGCATGCGCCTTTGTCGCA...ATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
3UTR-3UTR CCA 90 bp AAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATTCTGAAGGGCGTCGCTaGTACCTCACCACCTCCTCG +
Preference number: 2 (lower is better)
Translates to: KFNKLSSELIYSNTRGSHSEGRR*YLTTSS
Trigger: CGAGGAGGTGGTGAGGTACCAGCGACGCCCTTCAGA...ATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
3UTR-3UTR CCA 90 bp GGGATTAAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCAAGGTCGAATCGATaGTGTCTCTATGGCATATAT +
Preference number: 2 (lower is better)
Translates to: GIKFNKLSSELIYSNTRGSRSNR*CLYGIY
Trigger: ATATATGCCATAGAGACACCATCGATTCGACCTTGA...CCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTTAATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
3UTR-3UTR GCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGACTGTTGTTTTAGATTaGAACTATGGATCGCTGTAT +
Preference number: 2 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRTVVLD*NYGSLY
Trigger: ATACAGCGATCCATAGTTGCAATCTAAAACAACAGT...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
3UTR TCA 72 bp AGAGGGTCCCATGAGCACTATGAGGCGGTACTTGTCTaGAGGGCGTCGCTGGTACCTCACCACCTCCTCGTA +
Preference number: 3 (lower is better)
Translates to: RGSHEHYEAVLV*RASLVPHHLLV
Trigger: TACGAGGAGGTGGTGAGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
3UTR-3UTR CAA 90 bp AAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATCCAACAAACTCCTCCTaGTCTTCTGAAAGTTCCTCA +
Preference number: 3 (lower is better)
Translates to: KFNKLSSELIYSNTRGSHPTNSS*SSESSS
Trigger: TGAGGAACTTTCAGAAGACAAGGAGGAGTTTGTTGG...ATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp CTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACACTGGCGAAATAGGGTTGACTTaGGGCAGGTGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LVRGTHCTVAAAGAAHTGEIGLT*GRCEAG
Trigger: ACCAGCCTCACACCTGCCTCAAGTCAACCCTATTTC...GCCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp ATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGTACCTCACCACCTCCGCCAGCCCACCGTaGATGATCCTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: MSTMRRYLSEGRRWYLTTSASPP*MILATK
Trigger: CTTGGTGGCCAGGATCATCCACGGTGGGCTGGCGGA...GGTGGTGAGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
3UTR CAA 72 bp ACACCAGAGGGTCCCATGAGCACTATGAGGCGGTACTaGTCTGAAGGGCGTCGCTGGTACCTCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: TPEGPMSTMRRY*SEGRRWYLTTS
Trigger: GGAGGTGGTGAGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACCCTCTGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp CTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACACTGGCCCCTGCCGGAGCTTCTaGAAGACTGTAAACATGCAT +
Preference number: 4 (lower is better)
Translates to: LVRGTHCTVAAAGAAHTGPCRSF*KTVNMH
Trigger: ATGCATGTTTACAGTCTTGCAGAAGCTCCGGCAGGG...GCCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp CCAGAGGGTCCCATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGAGGATGTCCCCCTTCTaGAAAGGCAATCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: PEGPMSTMRRYLSEGRRWRMSPF*KGNPAS
Trigger: GGACGCTGGATTGCCTTTCCAGAAGGGGGACATCCT...CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACCCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp CACCTCCTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACGTCCAGTCCCTCAACTaGAACTCCATTCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: HLLVRGTHCTVAAAGAAHVQSLN*NSIHFY
Trigger: GTAGAAGTGAATGGAGTTTCAGTTGAGGGACTGGAC...GTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp ATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGTACCTCACCACCTGTAGCAGCTGCCGGTaGAGCACACACTGGCATGCA +
Preference number: 4 (lower is better)
Translates to: MSTMRRYLSEGRRWYLTTCSSCR*STHWHA
Trigger: TGCATGCCAGTGTGTGCTGCACCGGCAGCTGCTACA...GGTGGTGAGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp CCAGAGGGTCCCATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGGGGTGCAGCAGGAGCTaGTTCCACACATTTCTCATC +
Preference number: 4 (lower is better)
Translates to: PEGPMSTMRRYLSEGRRWGCSRS*FHTFLI
Trigger: GATGAGAAATGTGTGGAAGCAGCTCCTGCTGCACCC...CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACCCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp CCTCCTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACACTTGAAGTGTGGAGCCTaGAGCATTTGTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPRKGHPLHCSSCRCSTHLKCGA*SICLSS
Trigger: AGAGCTGAGACAAATGCTCCAGGCTCCACACTTCAA...GTGTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp CTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACACTGGCAGGAGGGTCAGAGACTaGAACCACCTTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: LVRGTHCTVAAAGAAHTGRRVRD*NHLEHD
Trigger: ATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCT...GCCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp CACCTCCTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACGGTTCAAAATCTTTCTaGGCTATCGTGTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: HLLVRGTHCTVAAAGAAHGSKSF*AIVSWA
Trigger: TGCCCATGACACGATAGCTCAGAAAGATTTTGAACC...GTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAGGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp GCGGCGGAAGCCAGCTATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCCTTTCATCTCGTGGCGCTTaGTGGTGGCTCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: AAEASYKELLTVANKLLLSSRGA*WWLPGA
Trigger: AGCCCCTGGGAGCCACCATCAAGCGCCACGAGATGA...AAGGAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATAGCTGGCTTCCGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp CTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGCACTATGAGGCGGGCAGGTAGCAGGGTCTaGGATTTTTCGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLSSFTPTPEGPMSTMRRAGSRV*DFSGLP
Trigger: TGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGC...CCGCCTCATAGTGCTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp GGTCCCATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGTACCTCCAAGGCCTTGAAGTGTaGAGCCTGGAGCATTTGTCT +
Preference number: 4 (lower is better)
Translates to: GPMSTMRRYLSEGRRWYLQGLEV*SLEHLS
Trigger: AGACAAATGCTCCAGGCTCCACACTTCAAGGCCTTG...GAGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp GCGGAAGCCAGCTATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCCTTGTCGTAAGGGGCACCCACTaGACTGTAGCAGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: AEASYKELLTVANKLLLVVRGTH*TVAAAG
Trigger: ACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTAC...GACAAGGAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATAGCTGGCTTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp GCTGCGGCGGAAGCCAGCTATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCCGGACGTACACCATCTaGTGGCTATTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AAAEASYKELLTVANKLLRTYTI*WLFTGG
Trigger: CCCTCCTGTGAATAGCCAGCAGATGGTGTACGTCCG...GAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATAGCTGGCTTCCGCCGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp CTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACACTGGCTTCCATAGAAATTGCTaGACGTTCTGCACATGTATC +
Preference number: 4 (lower is better)
Translates to: LVRGTHCTVAAAGAAHTGFHRNC*TFCTCI
Trigger: GATACATGTGCAGAACGTGCAGCAATTTCTATGGAA...GCCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp GCTGCGGCGGAAGCCAGCTATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCGAGATTTTTCGGGCCTaGCACCAGAGGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: AAAEASYKELLTVANKLLEIFRA*HQRASF
Trigger: GAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTC...GAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATAGCTGGCTTCCGCCGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp CTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGCACTATGAGGCGGCTGTATCATCCTCCCTaGCGGAGCTTCTGCAAGACT +
Preference number: 4 (lower is better)
Translates to: LLSSFTPTPEGPMSTMRRLYHPP*RSFCKT
Trigger: AGTCTTGCAGAAGCTCCGGCAGGGAGGATGATACAG...CCGCCTCATAGTGCTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp AATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGCACGAGGCGGTACTTGTCTaGAGGGCGTCGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: NKLSSELIYSNTRGSHEHEAVLV*RASLVP
Trigger: AGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTC...GTGCTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp GGTCCCATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGTACCTCACAAACAATCCTCATTaGTTCCTCACTCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GPMSTMRRYLSEGRRWYLTNNPH*FLTLRD
Trigger: ATCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGT...GAGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp CTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGCACTATGAGGCGGCAGAGGGCATCATTCTaGTCCACAATCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LLSSFTPTPEGPMSTMRRQRASF*STIWRM
Trigger: CATCCTCCAGATTGTGGACCAGAATGATGCCCTCTG...CCGCCTCATAGTGCTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp AATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGCACATCTTTAGCAGAGCCTaGAGCCACGGCGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NKLSSELIYSNTRGSHEHIFSRA*SHGEWR
Trigger: CCTCCACTCGCCGTGGCTTCAGGCTCTGCTAAAGAT...GTGCTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp TTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGTGCAGCGGGCTGAGGTaGGACTTCCTGCGACAAAGG +
Preference number: 4 (lower is better)
Translates to: FNKLSSELIYSNTRGSHECSGLR*DFLRQR
Trigger: CCTTTGTCGCAGGAAGTCTCACCTCAGCCCGCTGCA...CTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp CCAGAGGGTCCCATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGTATATCAGCTTTACATaGAACACATGGTATTCGGCA +
Preference number: 4 (lower is better)
Translates to: PEGPMSTMRRYLSEGRRWYISFT*NTWYSA
Trigger: TGCCGAATACCATGTGTTTCATGTAAAGCTGATATA...CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACCCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp AATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGCACGATGACAGTCAGGGGTaGAGCAGGAGCTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: NKLSSELIYSNTRGSHEHDDSQG*SRSCFH
Trigger: GTGGAAGCAGCTCCTGCTGCACCCCTGACTGTCATC...GTGCTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp CTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGCACTATGAGGCGGGATATTGTCTGGCAGTaGAGGGAGAAGGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LLSSFTPTPEGPMSTMRRDIVWQ*REKGFK
Trigger: TTTGAACCCCTTCTCCCTCCACTGCCAGACAATATC...CCGCCTCATAGTGCTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp GCTGCGGCGGAAGCCAGCTATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCGACATGGCCAGAATATaGATCACTTGTTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: AAAEASYKELLTVANKLLDMARI*ITCSGS
Trigger: GGACCCTGAACAAGTGATCCATATTCTGGCCATGTC...GAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATAGCTGGCTTCCGCCGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp GCGGAAGCCAGCTATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCCTTGTCGCCAGTACTCAGTCATaGCACGGACGTACACCATCT +
Preference number: 4 (lower is better)
Translates to: AEASYKELLTVANKLLLVASTQS*HGRTPS
Trigger: AGATGGTGTACGTCCGTGCCATGACTGAGTACTGGC...GACAAGGAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATAGCTGGCTTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACTCATCTCGTGGCGCTTaGTGGTGGCTCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYSSRGA*WWLPGA
Trigger: AGCCCCTGGGAGCCACCATCAAGCGCCACGAGATGA...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTATCATCTCGTGGCGCTTaGTGGTGGCTCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVSSRGA*WWLPGA
Trigger: AGCCCCTGGGAGCCACCATCAAGCGCCACGAGATGA...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTCATCTCGTGGCGCTTaGTGGTGGCTCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKSSRGA*WWLPGA
Trigger: AGCCCCTGGGAGCCACCATCAAGCGCCACGAGATGA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGTCATCTCGTGGCGCTTaGTGGTGGCTCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKSSRGA*WWLPGA
Trigger: AGCCCCTGGGAGCCACCATCAAGCGCCACGAGATGA...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATCCAGCCCACCGTGGATaGTCCTGGCCACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: KFNKLSSELIYSNTRGSHPAHRG*SWPPRC
Trigger: ACATCTTGGTGGCCAGGATCATCCACGGTGGGCTGG...ATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACTGCAGCGGGCTGAGGTaGGACTTCCTGCGACAAAGG +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNCSGLR*DFLRQR
Trigger: CCTTTGTCGCAGGAAGTCTCACCTCAGCCCGCTGCA...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATGCAGCGGGCTGAGGTaGGACTTCCTGCGACAAAGG +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPACSGLR*DFLRQR
Trigger: CCTTTGTCGCAGGAAGTCTCACCTCAGCCCGCTGCA...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACGAGGCGGTACTTGTCTaGAGGGCGTCGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNEAVLV*RASLVP
Trigger: AGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTC...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACTGCGACAAAGGCGCATaGTGCGGCGGAAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNCDKGA*CGGSQL
Trigger: TAGCTGGCTTCCGCCGCAGCATGCGCCTTTGTCGCA...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GGGATTAAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTGCGACAAAGGCGCATaGTGCGGCGGAAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: GIKFNKLSSELIYSNTRGCDKGA*CGGSQL
Trigger: TAGCTGGCTTCCGCCGCAGCATGCGCCTTTGTCGCA...CCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTTAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACCTGCACTGTAGCAGCTaGCGGTGCAGCACACACTGG +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNLHCSS*RCSTHW
Trigger: CCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAG...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCACTGCACTGTAGCAGCTaGCGGTGCAGCACACACTGG +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPALHCSS*RCSTHW
Trigger: CCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAG...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACCTGCACTGTAGCAGCTaGCGGTGCAGCACACACTGG +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYLHCSS*RCSTHW
Trigger: CCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAG...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACGTAAGGGGCACCCACTaGACTGTAGCAGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYVRGTH*TVAAAG
Trigger: ACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTAC...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACGTAAGGGGCACCCACTaGACTGTAGCAGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNVRGTH*TVAAAG
Trigger: ACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTAC...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCATCCGCCAGCCCACCGTaGATGATCCTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPSASPP*MILATK
Trigger: CTTGGTGGCCAGGATCATCCACGGTGGGCTGGCGGA...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACTCTGAAGGGCGTCGCTaGTACCTCACCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNSEGRR*YLTTSS
Trigger: CGAGGAGGTGGTGAGGTACCAGCGACGCCCTTCAGA...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GGGATTAAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCTGAAGGGCGTCGCTaGTACCTCACCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GIKFNKLSSELIYSNTRGSEGRR*YLTTSS
Trigger: CGAGGAGGTGGTGAGGTACCAGCGACGCCCTTCAGA...CCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTTAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAATCATCTCGTGGCGCTTaGTGGTGGCTCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKSSRGA*WWLPGA
Trigger: AGCCCCTGGGAGCCACCATCAAGCGCCACGAGATGA...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGCCAGCCCACCGTGGATaGTCCTGGCCACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGPAHRG*SWPPRC
Trigger: ACATCTTGGTGGCCAGGATCATCCACGGTGGGCTGG...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACGCAGGTAGCAGGGTCTaGGATTTTTCGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYAGSRV*DFSGLP
Trigger: TGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGC...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAGCAGGTAGCAGGGTCTaGGATTTTTCGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAAGSRV*DFSGLP
Trigger: TGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGC...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTGCAGCGGGCTGAGGTaGGACTTCCTGCGACAAAGG +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKCSGLR*DFLRQR
Trigger: CCTTTGTCGCAGGAAGTCTCACCTCAGCCCGCTGCA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGAGGCGGTACTTGTCTaGAGGGCGTCGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPEAVLV*RASLVP
Trigger: AGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTC...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGGAGGCGGTACTTGTCTaGAGGGCGTCGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGEAVLV*RASLVP
Trigger: AGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTC...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGCACAACAGACTCAGCTCTTaGAGCACAAGCCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: NKLSSELIYSNTRGSHEHNRLSS*STSLRI
Trigger: GATCCTGAGGCTTGTGCTGCAAGAGCTGAGTCTGTT...GTGCTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGTGCGACAAAGGCGCATaGTGCGGCGGAAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKCDKGA*CGGSQL
Trigger: TAGCTGGCTTCCGCCGCAGCATGCGCCTTTGTCGCA...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTATGCGACAAAGGCGCATaGTGCGGCGGAAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVCDKGA*CGGSQL
Trigger: TAGCTGGCTTCCGCCGCAGCATGCGCCTTTGTCGCA...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACTGTAGCAGCTGCCGGTaGAGCACACACTGGCATGCA +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYCSSCR*STHWHA
Trigger: TGCATGCCAGTGTGTGCTGCACCGGCAGCTGCTACA...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATGTAGCAGCTGCCGGTaGAGCACACACTGGCATGCA +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPACSSCR*STHWHA
Trigger: TGCATGCCAGTGTGTGCTGCACCGGCAGCTGCTACA...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACTGTAGCAGCTGCCGGTaGAGCACACACTGGCATGCA +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNCSSCR*STHWHA
Trigger: TGCATGCCAGTGTGTGCTGCACCGGCAGCTGCTACA...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCTGCACTGTAGCAGCTaGCGGTGCAGCACACACTGG +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKLHCSS*RCSTHW
Trigger: CCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACTGCACTGTAGCAGCTaGCGGTGCAGCACACACTGG +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPLHCSS*RCSTHW
Trigger: CCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGTAAGGGGCACCCACTaGACTGTAGCAGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPVRGTH*TVAAAG
Trigger: ACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTAC...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACCTCACTCAGTCCCACTaGCCACCAGCTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYLTQSH*PPALST
Trigger: TGTGCTGAGAGCTGGTGGCCAGTGGGACTGAGTGAG...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCACTCACTCAGTCCCACTaGCCACCAGCTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPALTQSH*PPALST
Trigger: TGTGCTGAGAGCTGGTGGCCAGTGGGACTGAGTGAG...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTTCCGCCAGCCCACCGTaGATGATCCTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSSASPP*MILATK
Trigger: CTTGGTGGCCAGGATCATCCACGGTGGGCTGGCGGA...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAATCCGCCAGCCCACCGTaGATGATCCTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKSASPP*MILATK
Trigger: CTTGGTGGCCAGGATCATCCACGGTGGGCTGGCGGA...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGTCCGCCAGCCCACCGTaGATGATCCTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRSASPP*MILATK
Trigger: CTTGGTGGCCAGGATCATCCACGGTGGGCTGGCGGA...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGTCTGAAGGGCGTCGCTaGTACCTCACCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKSEGRR*YLTTSS
Trigger: CGAGGAGGTGGTGAGGTACCAGCGACGCCCTTCAGA...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTCTGAAGGGCGTCGCTaGTACCTCACCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGSEGRR*YLTTSS
Trigger: CGAGGAGGTGGTGAGGTACCAGCGACGCCCTTCAGA...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGATGTCGGGATCCTCCTaGGGCCAGTACTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: NSISCLLSSFTPTPEGPMMSGSS*GQYSVM
Trigger: CATGACTGAGTACTGGCCCCAGGAGGATCCCGACAT...CATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGATCTTTAGCAGAGCCTaGAGCCACGGCGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKIFSRA*SHGEWR
Trigger: CCTCCACTCGCCGTGGCTTCAGGCTCTGCTAAAGAT...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAATCTTTAGCAGAGCCTaGAGCCACGGCGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVIFSRA*SHGEWR
Trigger: CCTCCACTCGCCGTGGCTTCAGGCTCTGCTAAAGAT...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCCCACCGTGGATaGTCCTGGCCACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTPAHRG*SWPPRC
Trigger: ACATCTTGGTGGCCAGGATCATCCACGGTGGGCTGG...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGCCAGCCCACCGTGGATaGTCCTGGCCACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRPAHRG*SWPPRC
Trigger: ACATCTTGGTGGCCAGGATCATCCACGGTGGGCTGG...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTCCAGCCCACCGTGGATaGTCCTGGCCACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSPAHRG*SWPPRC
Trigger: ACATCTTGGTGGCCAGGATCATCCACGGTGGGCTGG...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGGCAGGTAGCAGGGTCTaGGATTTTTCGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKAGSRV*DFSGLP
Trigger: TGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGC...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGGCAGGTAGCAGGGTCTaGGATTTTTCGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGAGSRV*DFSGLP
Trigger: TGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGC...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGGCAGGTAGCAGGGTCTaGGATTTTTCGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKAGSRV*DFSGLP
Trigger: TGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGC...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAATGCAGCGGGCTGAGGTaGGACTTCCTGCGACAAAGG +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKCSGLR*DFLRQR
Trigger: CCTTTGTCGCAGGAAGTCTCACCTCAGCCCGCTGCA...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAGAGGCGGTACTTGTCTaGAGGGCGTCGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKEAVLV*RASLVP
Trigger: AGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTC...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGGAGGCGGTACTTGTCTaGAGGGCGTCGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMREAVLV*RASLVP
Trigger: AGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTC...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GCGGCGGAAGCCAGCTATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCCTTTGTAAACATGCATGTTaGTCCTATCCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: AAEASYKELLTVANKLLLCKHAC*SYPDKS
Trigger: GCTTTTGTCTGGATAGGAGCAACATGCATGTTTACA...AAGGAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATAGCTGGCTTCCGCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGTGCGACAAAGGCGCATaGTGCGGCGGAAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRCDKGA*CGGSQL
Trigger: TAGCTGGCTTCCGCCGCAGCATGCGCCTTTGTCGCA...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTGCGACAAAGGCGCATaGTGCGGCGGAAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCCDKGA*CGGSQL
Trigger: TAGCTGGCTTCCGCCGCAGCATGCGCCTTTGTCGCA...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCATGTAGCAGCTGCCGGTaGAGCACACACTGGCATGCA +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPCSSCR*STHWHA
Trigger: TGCATGCCAGTGTGTGCTGCACCGGCAGCTGCTACA...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTGTAGCAGCTGCCGGTaGAGCACACACTGGCATGCA +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGCSSCR*STHWHA
Trigger: TGCATGCCAGTGTGTGCTGCACCGGCAGCTGCTACA...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGGTAAGGGGCACCCACTaGACTGTAGCAGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRVRGTH*TVAAAG
Trigger: ACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTAC...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTGTAAGGGGCACCCACTaGACTGTAGCAGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTVRGTH*TVAAAG
Trigger: ACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTAC...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATTCCGCCAGCCCACCGTaGATGATCCTGGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHSASPP*MILATK
Trigger: CTTGGTGGCCAGGATCATCCACGGTGGGCTGGCGGA...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAGGATGTCCCCCTTCTaGAAAGGCAATCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNRMSPF*KGNPAS
Trigger: GGACGCTGGATTGCCTTTCCAGAAGGGGGACATCCT...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAAGGATGTCCCCCTTCTaGAAAGGCAATCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPARMSPF*KGNPAS
Trigger: GGACGCTGGATTGCCTTTCCAGAAGGGGGACATCCT...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTTCTGAAGGGCGTCGCTaGTACCTCACCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTSEGRR*YLTTSS
Trigger: CGAGGAGGTGGTGAGGTACCAGCGACGCCCTTCAGA...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACATGTCGGGATCCTCCTaGGGCCAGTACTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNMSGSS*GQYSVM
Trigger: CATGACTGAGTACTGGCCCCAGGAGGATCCCGACAT...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTATCTTTAGCAGAGCCTaGAGCCACGGCGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTIFSRA*SHGEWR
Trigger: CCTCCACTCGCCGTGGCTTCAGGCTCTGCTAAAGAT...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTATCTTTAGCAGAGCCTaGAGCCACGGCGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCIFSRA*SHGEWR
Trigger: CCTCCACTCGCCGTGGCTTCAGGCTCTGCTAAAGAT...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATCCAGCCCACCGTGGATaGTCCTGGCCACCAAGATGT +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHPAHRG*SWPPRC
Trigger: ACATCTTGGTGGCCAGGATCATCCACGGTGGGCTGG...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTGCAGGTAGCAGGGTCTaGGATTTTTCGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTAGSRV*DFSGLP
Trigger: TGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGC...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACTGTATAGGGTTGACTTaGGGCAGGTGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNCIGLT*GRCEAG
Trigger: ACCAGCCTCACACCTGCCTCAAGTCAACCCTATACA...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000396886.7
ENST00000409143.5
ENST00000620095.4
CDS-3UTR TCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATTGCAGCGGGCTGAGGTaGGACTTCCTGCGACAAAGG +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHCSGLR*DFLRQR
Trigger: CCTTTGTCGCAGGAAGTCTCACCTCAGCCCGCTGCA...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATGAGGCGGTACTTGTCTaGAGGGCGTCGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHEAVLV*RASLVP
Trigger: AGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTC...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGCTCCATTCACATCTCTaGCGTAGAACAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: FNKLSSELIYSNTRGSHELHSHL*RRTDSA
Trigger: AGCTGAGTCTGTTCTACGGCAGAGATGTGAATGGAG...CTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAGAGATTTTTCGGGCCTaGCACCAGAGGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAEIFRA*HQRASF
Trigger: GAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTC...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATTGCGACAAAGGCGCATaGTGCGGCGGAAGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHCDKGA*CGGSQL
Trigger: TAGCTGGCTTCCGCCGCAGCATGCGCCTTTGTCGCA...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTTGTAGCAGCTGCCGGTaGAGCACACACTGGCATGCA +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTCSSCR*STHWHA
Trigger: TGCATGCCAGTGTGTGCTGCACCGGCAGCTGCTACA...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTTGTAGCAGCTGCCGGTaGAGCACACACTGGCATGCA +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSCSSCR*STHWHA
Trigger: TGCATGCCAGTGTGTGCTGCACCGGCAGCTGCTACA...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACGGACGTACACCATCTaGTGGCTATTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPRTYTI*WLFTGG
Trigger: CCCTCCTGTGAATAGCCAGCAGATGGTGTACGTCCG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGCGGACGTACACCATCTaGTGGCTATTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKRTYTI*WLFTGG
Trigger: CCCTCCTGTGAATAGCCAGCAGATGGTGTACGTCCG...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACGGACGTACACCATCTaGTGGCTATTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVRTYTI*WLFTGG
Trigger: CCCTCCTGTGAATAGCCAGCAGATGGTGTACGTCCG...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCGGACGTACACCATCTaGTGGCTATTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKRTYTI*WLFTGG
Trigger: CCCTCCTGTGAATAGCCAGCAGATGGTGTACGTCCG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCTCACTCAGTCCCACTaGCCACCAGCTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTLTQSH*PPALST
Trigger: TGTGCTGAGAGCTGGTGGCCAGTGGGACTGAGTGAG...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTCTCACTCAGTCCCACTaGCCACCAGCTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSLTQSH*PPALST
Trigger: TGTGCTGAGAGCTGGTGGCCAGTGGGACTGAGTGAG...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGCTCACTCAGTCCCACTaGCCACCAGCTCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRLTQSH*PPALST
Trigger: TGTGCTGAGAGCTGGTGGCCAGTGGGACTGAGTGAG...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAGGATGTCCCCCTTCTaGAAAGGCAATCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKRMSPF*KGNPAS
Trigger: GGACGCTGGATTGCCTTTCCAGAAGGGGGACATCCT...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTCTGGTCCACAATCTaGAGGATGTCCCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAFWSTI*RMSPFW
Trigger: CCAGAAGGGGGACATCCTCCAGATTGTGGACCAGAA...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATTCTGAAGGGCGTCGCTaGTACCTCACCACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHSEGRR*YLTTSS
Trigger: CGAGGAGGTGGTGAGGTACCAGCGACGCCCTTCAGA...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACCCTGAGCCTTCTGTATaGCAGACAACAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNPEPSV*QTTTGH
Trigger: GTGCCCAGTTGTTGTCTGCCATACAGAAGGCTCAGG...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACGCCAGTACTCAGTCATaGCACGGACGTACACCATCT +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYASTQS*HGRTPS
Trigger: AGATGGTGTACGTCCGTGCCATGACTGAGTACTGGC...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAATGTCGGGATCCTCCTaGGGCCAGTACTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPMSGSS*GQYSVM
Trigger: CATGACTGAGTACTGGCCCCAGGAGGATCCCGACAT...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGATGTCGGGATCCTCCTaGGGCCAGTACTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKMSGSS*GQYSVM
Trigger: CATGACTGAGTACTGGCCCCAGGAGGATCCCGACAT...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAATGTCGGGATCCTCCTaGGGCCAGTACTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVMSGSS*GQYSVM
Trigger: CATGACTGAGTACTGGCCCCAGGAGGATCCCGACAT...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTATGTATAGGGTTGACTTaGGGCAGGTGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVCIGLT*GRCEAG
Trigger: ACCAGCCTCACACCTGCCTCAAGTCAACCCTATACA...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000396886.7
ENST00000409143.5
ENST00000620095.4
CDS-3UTR TCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTGTATAGGGTTGACTTaGGGCAGGTGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGCIGLT*GRCEAG
Trigger: ACCAGCCTCACACCTGCCTCAAGTCAACCCTATACA...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000396886.7
ENST00000409143.5
ENST00000620095.4
CDS-3UTR TCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAGAGGCTCTAGGTCCATaGCACAGATCTTTCCTTCGA +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAEALGP*HRSFLR
Trigger: TCGAAGGAAAGATCTGTGTCATGGACCTAGAGCCTC...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTTGATAGGGTTGACTTaGGGCAGGTGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKLIGLT*GRCEAG
Trigger: ACCAGCCTCACACCTGCCTCAAGTCAACCCTATCAA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359962.9
ENST00000409474.8
CDS-3UTR TCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTATTGATAGGGTTGACTTaGGGCAGGTGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVLIGLT*GRCEAG
Trigger: ACCAGCCTCACACCTGCCTCAAGTCAACCCTATCAA...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359962.9
ENST00000409474.8
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCATATAGGGTTGACTTaGGGCAGGTGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKHIGLT*GRCEAG
Trigger: ACCAGCCTCACACCTGCCTCAAGTCAACCCTATATG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428900.6
CDS-3UTR GCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGGAGATTTTTCGGGCCTaGCACCAGAGGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKEIFRA*HQRASF
Trigger: GAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTC...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGAGATTTTTCGGGCCTaGCACCAGAGGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPEIFRA*HQRASF
Trigger: GAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTC...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAGAGATTTTTCGGGCCTaGCACCAGAGGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVEIFRA*HQRASF
Trigger: GAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTC...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGCGGACGTACACCATCTaGTGGCTATTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRRTYTI*WLFTGG
Trigger: CCCTCCTGTGAATAGCCAGCAGATGGTGTACGTCCG...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGCATGTCCTTCTTGTCTaGTGGATCTGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: NSISCLLSSFTPTPEGPMHVLLV*WICSFV
Trigger: GACAAAGGAGCAGATCCACCAGACAAGAAGGACATG...CATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp AATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGATTTGTCTCAGCTCTTaGATCTCAGGGGAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: NSISCLLSSFTPTPEGPMICLSS*ISGEVG
Trigger: CCCTACTTCCCCTGAGATCCAAGAGCTGAGACAAAT...CATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCACAAGGCCTTGAAGTGTaGAGCCTGGAGCATTTGTCT +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAQGLEV*SLEHLS
Trigger: AGACAAATGCTCCAGGCTCCACACTTCAAGGCCTTG...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACCAAGGCCTTGAAGTGTaGAGCCTGGAGCATTTGTCT +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNQGLEV*SLEHLS
Trigger: AGACAAATGCTCCAGGCTCCACACTTCAAGGCCTTG...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTAGGATGTCCCCCTTCTaGAAAGGCAATCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSRMSPF*KGNPAS
Trigger: GGACGCTGGATTGCCTTTCCAGAAGGGGGACATCCT...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAAGGATGTCCCCCTTCTaGAAAGGCAATCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKRMSPF*KGNPAS
Trigger: GGACGCTGGATTGCCTTTCCAGAAGGGGGACATCCT...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCATTCTGGTCCACAATCTaGAGGATGTCCCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPFWSTI*RMSPFW
Trigger: CCAGAAGGGGGACATCCTCCAGATTGTGGACCAGAA...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTTCTGGTCCACAATCTaGAGGATGTCCCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGFWSTI*RMSPFW
Trigger: CCAGAAGGGGGACATCCTCCAGATTGTGGACCAGAA...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTTCTGGTCCACAATCTaGAGGATGTCCCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKFWSTI*RMSPFW
Trigger: CCAGAAGGGGGACATCCTCCAGATTGTGGACCAGAA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGTTCTGGTCCACAATCTaGAGGATGTCCCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKFWSTI*RMSPFW
Trigger: CCAGAAGGGGGACATCCTCCAGATTGTGGACCAGAA...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCACAGAGGGCATCATTCTaGTCCACAATCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAQRASF*STIWRM
Trigger: CATCCTCCAGATTGTGGACCAGAATGATGCCCTCTG...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAATGGCAGACAACAACTaGGCACATGCATCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAMADNN*AHASCK
Trigger: CTTGCACGATGCATGTGCCCAGTTGTTGTCTGCCAT...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACCTGAGCCTTCTGTATaGCAGACAACAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPPEPSV*QTTTGH
Trigger: GTGCCCAGTTGTTGTCTGCCATACAGAAGGCTCAGG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGGGAAATCCATGTTGCTaGTACCCACTGAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGGNPCC*YPLRLL
Trigger: GAGGAGCCTCAGTGGGTACCAGCAACATGGATTTCC...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAGGAAATCCATGTTGCTaGTACCCACTGAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVGNPCC*YPLRLL
Trigger: GAGGAGCCTCAGTGGGTACCAGCAACATGGATTTCC...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACACGTACACCATCTGCTaGCTATTCACAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNTYTIC*LFTGGS
Trigger: TGACCCTCCTGTGAATAGCCAGCAGATGGTGTACGT...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GGGATTAAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGACGTACACCATCTGCTaGCTATTCACAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GIKFNKLSSELIYSNTRGTYTIC*LFTGGS
Trigger: TGACCCTCCTGTGAATAGCCAGCAGATGGTGTACGT...CCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTTAATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGGCCAGTACTCAGTCATaGCACGGACGTACACCATCT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKASTQS*HGRTPS
Trigger: AGATGGTGTACGTCCGTGCCATGACTGAGTACTGGC...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAGCCAGTACTCAGTCATaGCACGGACGTACACCATCT +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVASTQS*HGRTPS
Trigger: AGATGGTGTACGTCCGTGCCATGACTGAGTACTGGC...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAATGTCGGGATCCTCCTaGGGCCAGTACTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKMSGSS*GQYSVM
Trigger: CATGACTGAGTACTGGCCCCAGGAGGATCCCGACAT...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTATGTCGGGATCCTCCTaGGGCCAGTACTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSMSGSS*GQYSVM
Trigger: CATGACTGAGTACTGGCCCCAGGAGGATCCCGACAT...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGGCTCCCTTGAAGTGTaGAGCCTGGAGCATTTGTCT +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPGSLEV*SLEHLS
Trigger: AGACAAATGCTCCAGGCTCCACACTTCAAGGGAGCC...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396886.7
CDS-3UTR TCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACGTCCAGTCCCTCAACTaGAACTCCATTCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNVQSLN*NSIHFY
Trigger: GTAGAAGTGAATGGAGTTTCAGTTGAGGGACTGGAC...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTTGTATAGGGTTGACTTaGGGCAGGTGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTCIGLT*GRCEAG
Trigger: ACCAGCCTCACACCTGCCTCAAGTCAACCCTATACA...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000396886.7
ENST00000409143.5
ENST00000620095.4
CDS-3UTR TCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATCGACAAGGACTGTTTaGACAGCATCCACACTAGTG +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPASTRTV*TASTLV
Trigger: CACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGA...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGGAGGCTCTAGGTCCATaGCACAGATCTTTCCTTCGA +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGEALGP*HRSFLR
Trigger: TCGAAGGAAAGATCTGTGTCATGGACCTAGAGCCTC...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGGAGGCTCTAGGTCCATaGCACAGATCTTTCCTTCGA +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKEALGP*HRSFLR
Trigger: TCGAAGGAAAGATCTGTGTCATGGACCTAGAGCCTC...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTTCGTGTCATGGGCACTaGGCAAGGCCTCATAGGATA +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSSCHGH*ARPHRI
Trigger: TATCCTATGAGGCCTTGCTCAGTGCCCATGACACGA...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409143.5
CDS-3UTR GCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGAACAGACTCAGCTCTTaGAGCACAAGCCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKNRLSS*STSLRI
Trigger: GATCCTGAGGCTTGTGCTGCAAGAGCTGAGTCTGTT...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTATGTCGGGATCCATCTaGTGGCTATTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCMSGSI*WLFTGG
Trigger: CCCTCCTGTGAATAGCCAGCAGATGGATCCCGACAT...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315506.11
CDS-3UTR GCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTGAGATTTTTCGGGCCTaGCACCAGAGGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTEIFRA*HQRASF
Trigger: GAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTC...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAGAGATTTTTCGGGCCTaGCACCAGAGGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKEIFRA*HQRASF
Trigger: GAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTC...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATGGGCACATGCATCGTaGAAGCTGTCATTCACAATC +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAWAHAS*KLSFTI
Trigger: GATTGTGAATGACAGCTTGCACGATGCATGTGCCCA...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACCAACAACTGGGCACATaGATCGTGCAAGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYQQLGT*IVQAVI
Trigger: AATGACAGCTTGCACGATGCATGTGCCCAGTTGTTG...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACCAACAACTGGGCACATaGATCGTGCAAGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNQQLGT*IVQAVI
Trigger: AATGACAGCTTGCACGATGCATGTGCCCAGTTGTTG...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATCGGACGTACACCATCTaGTGGCTATTCACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHRTYTI*WLFTGG
Trigger: CCCTCCTGTGAATAGCCAGCAGATGGTGTACGTCCG...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCACATGTCCTTCTTGTCTaGTGGATCTGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAHVLLV*WICSFV
Trigger: GACAAAGGAGCAGATCCACCAGACAAGAAGGACATG...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTGAAGTGTGGAGCCTaGAGCATTTGTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPALKCGA*SICLSS
Trigger: AGAGCTGAGACAAATGCTCCAGGCTCCACACTTCAA...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACTTGAAGTGTGGAGCCTaGAGCATTTGTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNLKCGA*SICLSS
Trigger: AGAGCTGAGACAAATGCTCCAGGCTCCACACTTCAA...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCAAGGCCTTGAAGTGTaGAGCCTGGAGCATTTGTCT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKQGLEV*SLEHLS
Trigger: AGACAAATGCTCCAGGCTCCACACTTCAAGGCCTTG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACAAGGCCTTGAAGTGTaGAGCCTGGAGCATTTGTCT +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPQGLEV*SLEHLS
Trigger: AGACAAATGCTCCAGGCTCCACACTTCAAGGCCTTG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAGATATTGTCTGGCAGTaGAGGGAGAAGGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPADIVWQ*REKGFK
Trigger: TTTGAACCCCTTCTCCCTCCACTGCCAGACAATATC...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAGACATGGCCAGAATATaGATCACTTGTTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPADMARI*ITCSGS
Trigger: GGACCCTGAACAAGTGATCCATATTCTGGCCATGTC...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACGACATGGCCAGAATATaGATCACTTGTTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYDMARI*ITCSGS
Trigger: GGACCCTGAACAAGTGATCCATATTCTGGCCATGTC...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAAGGAGGGTCAGAGACTaGAACCACCTTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPARRVRD*NHLEHD
Trigger: ATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCT...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAGGAGGGTCAGAGACTaGAACCACCTTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNRRVRD*NHLEHD
Trigger: ATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCT...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTCGGGATCCATCTGCTaGCTATTCACAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCSGSIC*LFTGGS
Trigger: TGACCCTCCTGTGAATAGCCAGCAGATGGATCCCGA...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315506.11
CDS-3UTR CCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATAGGATGTCCCCCTTCTaGAAAGGCAATCCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHRMSPF*KGNPAS
Trigger: GGACGCTGGATTGCCTTTCCAGAAGGGGGACATCCT...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp ACTCCTCCTTGTCTTCTGAAAGTTCCTCAGATTCAAATGTTTCTTCATCTTTGTTTCTGGTCCACAATCTaGAGGATGTCCCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TPPCLLKVPQIQMFLHLCFWSTI*RMSPFW
Trigger: CCAGAAGGGGGACATCCTCCAGATTGTGGACCAGAA...ACAAAGATGAAGAAACATTTGAATCTGAGGAACTTTCAGAAGACAAGGAGGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTTTCTGGTCCACAATCTaGAGGATGTCCCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTFWSTI*RMSPFW
Trigger: CCAGAAGGGGGACATCCTCCAGATTGTGGACCAGAA...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGAGGGCATCATTCTaGTCCACAATCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVQRASF*STIWRM
Trigger: CATCCTCCAGATTGTGGACCAGAATGATGCCCTCTG...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACAGAGGGCATCATTCTaGTCCACAATCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPQRASF*STIWRM
Trigger: CATCCTCCAGATTGTGGACCAGAATGATGCCCTCTG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCAGAGGGCATCATTCTaGTCCACAATCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKQRASF*STIWRM
Trigger: CATCCTCCAGATTGTGGACCAGAATGATGCCCTCTG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACCTAGTGCCATACAGGTaGCCTTTGTACTCACCATAC +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYLVPYR*PLYSPY
Trigger: GTATGGTGAGTACAAAGGCCACCTGTATGGCACTAG...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACCTAGTGCCATACAGGTaGCCTTTGTACTCACCATAC +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNLVPYR*PLYSPY
Trigger: GTATGGTGAGTACAAAGGCCACCTGTATGGCACTAG...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAATGGCAGACAACAACTaGGCACATGCATCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVMADNN*AHASCK
Trigger: CTTGCACGATGCATGTGCCCAGTTGTTGTCTGCCAT...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGATGGCAGACAACAACTaGGCACATGCATCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGMADNN*AHASCK
Trigger: CTTGCACGATGCATGTGCCCAGTTGTTGTCTGCCAT...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCTGAGCCTTCTGTATaGCAGACAACAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTPEPSV*QTTTGH
Trigger: GTGCCCAGTTGTTGTCTGCCATACAGAAGGCTCAGG...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTCCTGAGCCTTCTGTATaGCAGACAACAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSPEPSV*QTTTGH
Trigger: GTGCCCAGTTGTTGTCTGCCATACAGAAGGCTCAGG...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGCCTGAGCCTTCTGTATaGCAGACAACAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRPEPSV*QTTTGH
Trigger: GTGCCCAGTTGTTGTCTGCCATACAGAAGGCTCAGG...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTCCTGAGCCTTCTGTATaGCAGACAACAACTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCPEPSV*QTTTGH
Trigger: GTGCCCAGTTGTTGTCTGCCATACAGAAGGCTCAGG...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGGAAATCCATGTTGCTaGTACCCACTGAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSGNPCC*YPLRLL
Trigger: GAGGAGCCTCAGTGGGTACCAGCAACATGGATTTCC...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTGGAAATCCATGTTGCTaGTACCCACTGAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTGNPCC*YPLRLL
Trigger: GAGGAGCCTCAGTGGGTACCAGCAACATGGATTTCC...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTGGAAATCCATGTTGCTaGTACCCACTGAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCGNPCC*YPLRLL
Trigger: GAGGAGCCTCAGTGGGTACCAGCAACATGGATTTCC...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGACGTACACCATCTGCTaGCTATTCACAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGTYTIC*LFTGGS
Trigger: TGACCCTCCTGTGAATAGCCAGCAGATGGTGTACGT...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGACGTACACCATCTGCTaGCTATTCACAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKTYTIC*LFTGGS
Trigger: TGACCCTCCTGTGAATAGCCAGCAGATGGTGTACGT...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAACGTACACCATCTGCTaGCTATTCACAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPTYTIC*LFTGGS
Trigger: TGACCCTCCTGTGAATAGCCAGCAGATGGTGTACGT...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAGCCAGTACTCAGTCATaGCACGGACGTACACCATCT +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKASTQS*HGRTPS
Trigger: AGATGGTGTACGTCCGTGCCATGACTGAGTACTGGC...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACGGTTCAAAATCTTTCTaGGCTATCGTGTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNGSKSF*AIVSWA
Trigger: TGCCCATGACACGATAGCTCAGAAAGATTTTGAACC...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACGGTTCAAAATCTTTCTaGGCTATCGTGTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYGSKSF*AIVSWA
Trigger: TGCCCATGACACGATAGCTCAGAAAGATTTTGAACC...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGGTCCAGTCCCTCAACTaGAACTCCATTCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKVQSLN*NSIHFY
Trigger: GTAGAAGTGAATGGAGTTTCAGTTGAGGGACTGGAC...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGTCCAGTCCCTCAACTaGAACTCCATTCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPVQSLN*NSIHFY
Trigger: GTAGAAGTGAATGGAGTTTCAGTTGAGGGACTGGAC...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTATCGACAAGGACTGTTTaGACAGCATCCACACTAGTG +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVSTRTV*TASTLV
Trigger: CACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGA...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGTCGACAAGGACTGTTTaGACAGCATCCACACTAGTG +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKSTRTV*TASTLV
Trigger: CACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGA...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTCGACAAGGACTGTTTaGACAGCATCCACACTAGTG +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKSTRTV*TASTLV
Trigger: CACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTCGACAAGGACTGTTTaGACAGCATCCACACTAGTG +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGSTRTV*TASTLV
Trigger: CACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGA...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGAGGCTCTAGGTCCATaGCACAGATCTTTCCTTCGA +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSEALGP*HRSFLR
Trigger: TCGAAGGAAAGATCTGTGTCATGGACCTAGAGCCTC...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAGAGGCTCTAGGTCCATaGCACAGATCTTTCCTTCGA +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKEALGP*HRSFLR
Trigger: TCGAAGGAAAGATCTGTGTCATGGACCTAGAGCCTC...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGGAGGCTCTAGGTCCATaGCACAGATCTTTCCTTCGA +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMREALGP*HRSFLR
Trigger: TCGAAGGAAAGATCTGTGTCATGGACCTAGAGCCTC...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACTTGAGACTCAGTATCTaGGGAAATCCATGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYLRLSI*GNPCCW
Trigger: CCAGCAACATGGATTTCCTCAGATACTGAGTCTCAA...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCTCCTCCTTGTCTTCTaGAAGTTCCTCTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTLLLVF*KFLCFH
Trigger: GTGGAAGCAGAGGAACTTTCAGAAGACAAGGAGGAG...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359962.9
CDS-3UTR TCA 90 bp ACTCCTCCTTGTCTTCTGAAAGTTCCTCAGATTCAAATGTTTCTTCATCTTTGTATGGTATTCGGCAGTTaGGCCATGATGACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: TPPCLLKVPQIQMFLHLCMVFGS*AMMTVR
Trigger: CCTGACTGTCATCATGGCTCAACTGCCGAATACCAT...ACAAAGATGAAGAAACATTTGAATCTGAGGAACTTTCAGAAGACAAGGAGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACCAGCTCTCAGCACACTaGAAGACTGTAAACATGCAT +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNQLSAH*KTVNMH
Trigger: ATGCATGTTTACAGTCTTGCAGTGTGCTGAGAGCTG...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000620095.4
CDS-3UTR GCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTAACAGACTCAGCTCTTaGAGCACAAGCCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCNRLSS*STSLRI
Trigger: GATCCTGAGGCTTGTGCTGCAAGAGCTGAGTCTGTT...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAAACAGACTCAGCTCTTaGAGCACAAGCCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKNRLSS*STSLRI
Trigger: GATCCTGAGGCTTGTGCTGCAAGAGCTGAGTCTGTT...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTAACAGACTCAGCTCTTaGAGCACAAGCCTCAGGATC +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSNRLSS*STSLRI
Trigger: GATCCTGAGGCTTGTGCTGCAAGAGCTGAGTCTGTT...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGCTCCATTCACATCTCTaGCGTAGAACAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGLHSHL*RRTDSA
Trigger: AGCTGAGTCTGTTCTACGGCAGAGATGTGAATGGAG...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACTCCATTCACATCTCTaGCGTAGAACAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPLHSHL*RRTDSA
Trigger: AGCTGAGTCTGTTCTACGGCAGAGATGTGAATGGAG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGCTCCATTCACATCTCTaGCGTAGAACAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKLHSHL*RRTDSA
Trigger: AGCTGAGTCTGTTCTACGGCAGAGATGTGAATGGAG...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATGAGATTTTTCGGGCCTaGCACCAGAGGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHEIFRA*HQRASF
Trigger: GAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTC...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCATGGGCACATGCATCGTaGAAGCTGTCATTCACAATC +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPWAHAS*KLSFTI
Trigger: GATTGTGAATGACAGCTTGCACGATGCATGTGCCCA...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTGGGCACATGCATCGTaGAAGCTGTCATTCACAATC +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGWAHAS*KLSFTI
Trigger: GATTGTGAATGACAGCTTGCACGATGCATGTGCCCA...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCAACAACTGGGCACATaGATCGTGCAAGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKQQLGT*IVQAVI
Trigger: AATGACAGCTTGCACGATGCATGTGCCCAGTTGTTG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCATGTCCTTCTTGTCTaGTGGATCTGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKHVLLV*WICSFV
Trigger: GACAAAGGAGCAGATCCACCAGACAAGAAGGACATG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACATGTCCTTCTTGTCTaGTGGATCTGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPHVLLV*WICSFV
Trigger: GACAAAGGAGCAGATCCACCAGACAAGAAGGACATG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACCCTGTGCATGTGGTGTaGCAGGAACTAGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNPVHVV*QELVSF
Trigger: AAAAGAAACTAGTTCCTGCCACACCACATGCACAGG...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACCCTGTGCATGTGGTGTaGCAGGAACTAGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYPVHVV*QELVSF
Trigger: AAAAGAAACTAGTTCCTGCCACACCACATGCACAGG...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATCCTGTGCATGTGGTGTaGCAGGAACTAGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KFNKLSSELIYSNTRGSHPVHVV*QELVSF
Trigger: AAAAGAAACTAGTTCCTGCCACACCACATGCACAGG...ATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGATTTGTCTCAGCTCTTaGATCTCAGGGGAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKICLSS*ISGEVG
Trigger: CCCTACTTCCCCTGAGATCCAAGAGCTGAGACAAAT...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAATTTGTCTCAGCTCTTaGATCTCAGGGGAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVICLSS*ISGEVG
Trigger: CCCTACTTCCCCTGAGATCCAAGAGCTGAGACAAAT...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTCAAGGCCTTGAAGTGTaGAGCCTGGAGCATTTGTCT +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCQGLEV*SLEHLS
Trigger: AGACAAATGCTCCAGGCTCCACACTTCAAGGCCTTG...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGGATATTGTCTGGCAGTaGAGGGAGAAGGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKDIVWQ*REKGFK
Trigger: TTTGAACCCCTTCTCCCTCCACTGCCAGACAATATC...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGGACATGGCCAGAATATaGATCACTTGTTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKDMARI*ITCSGS
Trigger: GGACCCTGAACAAGTGATCCATATTCTGGCCATGTC...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGACATGGCCAGAATATaGATCACTTGTTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPDMARI*ITCSGS
Trigger: GGACCCTGAACAAGTGATCCATATTCTGGCCATGTC...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GGGATTAAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTTGTGCCTCGAGACATaGCCAGAATATGGATCACTT +
Preference number: 4 (lower is better)
Translates to: GIKFNKLSSELIYSNTRGLCLET*PEYGSL
Trigger: AAGTGATCCATATTCTGGCCATGTCTCGAGGCACAA...CCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTTAATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAAGGAGGGTCAGAGACTaGAACCACCTTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVRRVRD*NHLEHD
Trigger: ATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCT...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGAGGAGGGTCAGAGACTaGAACCACCTTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKRRVRD*NHLEHD
Trigger: ATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCT...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTATGGCAGACAACAACTaGGCACATGCATCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTMADNN*AHASCK
Trigger: CTTGCACGATGCATGTGCCCAGTTGTTGTCTGCCAT...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGATGGCAGACAACAACTaGGCACATGCATCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRMADNN*AHASCK
Trigger: CTTGCACGATGCATGTGCCCAGTTGTTGTCTGCCAT...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTACGTACACCATCTGCTaGCTATTCACAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSTYTIC*LFTGGS
Trigger: TGACCCTCCTGTGAATAGCCAGCAGATGGTGTACGT...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGTCAAGGTCGAATCGATaGTGTCTCTATGGCATATAT +
Preference number: 4 (lower is better)
Translates to: FNKLSSELIYSNTRGSHESRSNR*CLYGIY
Trigger: ATATATGCCATAGAGACACCATCGATTCGACCTTGA...CTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTGTCCAGTCCCTCAACTaGAACTCCATTCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTVQSLN*NSIHFY
Trigger: GTAGAAGTGAATGGAGTTTCAGTTGAGGGACTGGAC...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATGTGGCACAGCACTTTaGAAATGGCTGGGATTAAAT +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPACGTAL*KWLGLN
Trigger: ATTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACA...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTTCGACAAGGACTGTTTaGACAGCATCCACACTAGTG +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSSTRTV*TASTLV
Trigger: CACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGA...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATGAGGCTCTAGGTCCATaGCACAGATCTTTCCTTCGA +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHEALGP*HRSFLR
Trigger: TCGAAGGAAAGATCTGTGTCATGGACCTAGAGCCTC...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAGTAGGTCTTCATCCTTaGACTTCATGTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAVGLHP*TSCPHS
Trigger: ACTATGTGGACATGAAGTTCAAGGATGAAGACCTAC...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTTGAGACTCAGTATCTaGGGAAATCCATGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGLRLSI*GNPCCW
Trigger: CCAGCAACATGGATTTCCTCAGATACTGAGTCTCAA...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTTGAGACTCAGTATCTaGGGAAATCCATGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKLRLSI*GNPCCW
Trigger: CCAGCAACATGGATTTCCTCAGATACTGAGTCTCAA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTATTGAGACTCAGTATCTaGGGAAATCCATGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVLRLSI*GNPCCW
Trigger: CCAGCAACATGGATTTCCTCAGATACTGAGTCTCAA...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCATTGAGACTCAGTATCTaGGGAAATCCATGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPLRLSI*GNPCCW
Trigger: CCAGCAACATGGATTTCCTCAGATACTGAGTCTCAA...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACAGCTCTCAGCACACTaGAAGACTGTAAACATGCAT +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPQLSAH*KTVNMH
Trigger: ATGCATGTTTACAGTCTTGCAGTGTGCTGAGAGCTG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000620095.4
CDS-3UTR GCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTCTCCATTCACATCTCTaGCGTAGAACAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSLHSHL*RRTDSA
Trigger: AGCTGAGTCTGTTCTACGGCAGAGATGTGAATGGAG...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACACAAACAATCCTCATTaGTTCCTCACTCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYTNNPH*FLTLRD
Trigger: ATCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGT...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTGGGCACATGCATCGTaGAAGCTGTCATTCACAATC +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCWAHAS*KLSFTI
Trigger: GATTGTGAATGACAGCTTGCACGATGCATGTGCCCA...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAATGGGCACATGCATCGTaGAAGCTGTCATTCACAATC +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKWAHAS*KLSFTI
Trigger: GATTGTGAATGACAGCTTGCACGATGCATGTGCCCA...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGTGGGCACATGCATCGTaGAAGCTGTCATTCACAATC +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRWAHAS*KLSFTI
Trigger: GATTGTGAATGACAGCTTGCACGATGCATGTGCCCA...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTTGGGCACATGCATCGTaGAAGCTGTCATTCACAATC +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTWAHAS*KLSFTI
Trigger: GATTGTGAATGACAGCTTGCACGATGCATGTGCCCA...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTCAACAACTGGGCACATaGATCGTGCAAGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSQQLGT*IVQAVI
Trigger: AATGACAGCTTGCACGATGCATGTGCCCAGTTGTTG...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGCAACAACTGGGCACATaGATCGTGCAAGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRQQLGT*IVQAVI
Trigger: AATGACAGCTTGCACGATGCATGTGCCCAGTTGTTG...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTCAACAACTGGGCACATaGATCGTGCAAGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCQQLGT*IVQAVI
Trigger: AATGACAGCTTGCACGATGCATGTGCCCAGTTGTTG...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCATGTCCTTCTTGTCTaGTGGATCTGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTHVLLV*WICSFV
Trigger: GACAAAGGAGCAGATCCACCAGACAAGAAGGACATG...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGCATGTCCTTCTTGTCTaGTGGATCTGCTCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRHVLLV*WICSFV
Trigger: GACAAAGGAGCAGATCCACCAGACAAGAAGGACATG...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACCTGTGCATGTGGTGTaGCAGGAACTAGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPPVHVV*QELVSF
Trigger: AAAAGAAACTAGTTCCTGCCACACCACATGCACAGG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGCCTGTGCATGTGGTGTaGCAGGAACTAGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKPVHVV*QELVSF
Trigger: AAAAGAAACTAGTTCCTGCCACACCACATGCACAGG...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTATTTGTCTCAGCTCTTaGATCTCAGGGGAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSICLSS*ISGEVG
Trigger: CCCTACTTCCCCTGAGATCCAAGAGCTGAGACAAAT...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAATTTGTCTCAGCTCTTaGATCTCAGGGGAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKICLSS*ISGEVG
Trigger: CCCTACTTCCCCTGAGATCCAAGAGCTGAGACAAAT...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTTTGAAGTGTGGAGCCTaGAGCATTTGTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSLKCGA*SICLSS
Trigger: AGAGCTGAGACAAATGCTCCAGGCTCCACACTTCAA...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTTTGAAGTGTGGAGCCTaGAGCATTTGTCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTLKCGA*SICLSS
Trigger: AGAGCTGAGACAAATGCTCCAGGCTCCACACTTCAA...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTGATATTGTCTGGCAGTaGAGGGAGAAGGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCDIVWQ*REKGFK
Trigger: TTTGAACCCCTTCTCCCTCCACTGCCAGACAATATC...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTGATATTGTCTGGCAGTaGAGGGAGAAGGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTDIVWQ*REKGFK
Trigger: TTTGAACCCCTTCTCCCTCCACTGCCAGACAATATC...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGATATTGTCTGGCAGTaGAGGGAGAAGGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSDIVWQ*REKGFK
Trigger: TTTGAACCCCTTCTCCCTCCACTGCCAGACAATATC...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGACATGGCCAGAATATaGATCACTTGTTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSDMARI*ITCSGS
Trigger: GGACCCTGAACAAGTGATCCATATTCTGGCCATGTC...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTATTGTGCCTCGAGACATaGCCAGAATATGGATCACTT +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVLCLET*PEYGSL
Trigger: AAGTGATCCATATTCTGGCCATGTCTCGAGGCACAA...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTTGTGCCTCGAGACATaGCCAGAATATGGATCACTT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKLCLET*PEYGSL
Trigger: AAGTGATCCATATTCTGGCCATGTCTCGAGGCACAA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGTTGTGCCTCGAGACATaGCCAGAATATGGATCACTT +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKLCLET*PEYGSL
Trigger: AAGTGATCCATATTCTGGCCATGTCTCGAGGCACAA...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTAGGAGGGTCAGAGACTaGAACCACCTTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCRRVRD*NHLEHD
Trigger: ATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCT...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATCAGAGGGCATCATTCTaGTCCACAATCTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHQRASF*STIWRM
Trigger: CATCCTCCAGATTGTGGACCAGAATGATGCCCTCTG...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAGTACGAGTAGTGTGTaGCACAGCACTTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNSTSSV*HSTLKM
Trigger: CATTTTCAAAGTGCTGTGCCACACACTACTCGTACT...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTCTAGTGCCATACAGGTaGCCTTTGTACTCACCATAC +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSLVPYR*PLYSPY
Trigger: GTATGGTGAGTACAAAGGCCACCTGTATGGCACTAG...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTCTAGTGCCATACAGGTaGCCTTTGTACTCACCATAC +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCLVPYR*PLYSPY
Trigger: GTATGGTGAGTACAAAGGCCACCTGTATGGCACTAG...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGGCAGACAACAACTaGGCACATGCATCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHMADNN*AHASCK
Trigger: CTTGCACGATGCATGTGCCCAGTTGTTGTCTGCCAT...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGGGTTCAAAATCTTTCTaGGCTATCGTGTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRGSKSF*AIVSWA
Trigger: TGCCCATGACACGATAGCTCAGAAAGATTTTGAACC...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATGTCCAGTCCCTCAACTaGAACTCCATTCACTTCTAC +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHVQSLN*NSIHFY
Trigger: GTAGAAGTGAATGGAGTTTCAGTTGAGGGACTGGAC...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTGTGGCACAGCACTTTaGAAATGGCTGGGATTAAAT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKCGTAL*KWLGLN
Trigger: ATTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTGTGGCACAGCACTTTaGAAATGGCTGGGATTAAAT +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGCGTAL*KWLGLN
Trigger: ATTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACA...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCATGTGGCACAGCACTTTaGAAATGGCTGGGATTAAAT +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPCGTAL*KWLGLN
Trigger: ATTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACA...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGGTAGGTCTTCATCCTTaGACTTCATGTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGVGLHP*TSCPHS
Trigger: ACTATGTGGACATGAAGTTCAAGGATGAAGACCTAC...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAAAAAATTGGCCAAACTaGGTTTCCATTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAKNWPN*VSILWA
Trigger: AGCCCAAAGAATGGAAACTCAGTTTGGCCAATTTTT...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAATTGAGACTCAGTATCTaGGGAAATCCATGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKLRLSI*GNPCCW
Trigger: CCAGCAACATGGATTTCCTCAGATACTGAGTCTCAA...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAAACAAGAAGTCTCATTaGGACTCAGTATCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPANKKSH*DSVSEE
Trigger: TTCCTCAGATACTGAGTCTCAATGAGACTTCTTGTT...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAACAAGAAGTCTCATTaGGACTCAGTATCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYNKKSH*DSVSEE
Trigger: TTCCTCAGATACTGAGTCTCAATGAGACTTCTTGTT...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATGTAAACATGCATGTTaGTCCTATCCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPACKHAC*SYPDKS
Trigger: GCTTTTGTCTGGATAGGAGCAACATGCATGTTTACA...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCAGCTCTCAGCACACTaGAAGACTGTAAACATGCAT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTQLSAH*KTVNMH
Trigger: ATGCATGTTTACAGTCTTGCAGTGTGCTGAGAGCTG...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000620095.4
CDS-3UTR GCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAACAAACAATCCTCATTaGTTCCTCACTCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVTNNPH*FLTLRD
Trigger: ATCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGT...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGACAAACAATCCTCATTaGTTCCTCACTCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKTNNPH*FLTLRD
Trigger: ATCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGT...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCTGTGCATGTGGTGTaGCAGGAACTAGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTPVHVV*QELVSF
Trigger: AAAAGAAACTAGTTCCTGCCACACCACATGCACAGG...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTCCTGTGCATGTGGTGTaGCAGGAACTAGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCPVHVV*QELVSF
Trigger: AAAAGAAACTAGTTCCTGCCACACCACATGCACAGG...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATTTGTCTCAGCTCTTaGATCTCAGGGGAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHICLSS*ISGEVG
Trigger: CCCTACTTCCCCTGAGATCCAAGAGCTGAGACAAAT...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTTTGTGCCTCGAGACATaGCCAGAATATGGATCACTT +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSLCLET*PEYGSL
Trigger: AAGTGATCCATATTCTGGCCATGTCTCGAGGCACAA...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTTTGTGCCTCGAGACATaGCCAGAATATGGATCACTT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTLCLET*PEYGSL
Trigger: AAGTGATCCATATTCTGGCCATGTCTCGAGGCACAA...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATAGGAGGGTCAGAGACTaGAACCACCTTGAACATGAT +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHRRVRD*NHLEHD
Trigger: ATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCT...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGAGTACGAGTAGTGTGTaGCACAGCACTTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGSTSSV*HSTLKM
Trigger: CATTTTCAAAGTGCTGTGCCACACACTACTCGTACT...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGTCGATGGTGTCTCTATaGCATATATCAGCTTTACAT +
Preference number: 4 (lower is better)
Translates to: NSISCLLSSFTPTPEGPMSMVSL*HISALH
Trigger: ATGTAAAGCTGATATATGCCATAGAGACACCATCGA...CATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR TCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATGGTTCAAAATCTTTCTaGGCTATCGTGTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHGSKSF*AIVSWA
Trigger: TGCCCATGACACGATAGCTCAGAAAGATTTTGAACC...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTTGTGGCACAGCACTTTaGAAATGGCTGGGATTAAAT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTCGTAL*KWLGLN
Trigger: ATTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACA...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAATGTGGCACAGCACTTTaGAAATGGCTGGGATTAAAT +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKCGTAL*KWLGLN
Trigger: ATTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACA...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGTACTCCAGCATCCTGTaGCTATATATGAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKYSSIL*LYMRFS
Trigger: TGAAAACCTCATATATAGTCACAGGATGCTGGAGTA...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACTCCAGCATCCTGTaGCTATATATGAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGYSSIL*LYMRFS
Trigger: TGAAAACCTCATATATAGTCACAGGATGCTGGAGTA...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTATACTCCAGCATCCTGTaGCTATATATGAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVYSSIL*LYMRFS
Trigger: TGAAAACCTCATATATAGTCACAGGATGCTGGAGTA...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCATACTCCAGCATCCTGTaGCTATATATGAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPYSSIL*LYMRFS
Trigger: TGAAAACCTCATATATAGTCACAGGATGCTGGAGTA...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGGTAGGTCTTCATCCTTaGACTTCATGTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRVGLHP*TSCPHS
Trigger: ACTATGTGGACATGAAGTTCAAGGATGAAGACCTAC...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTGTAGGTCTTCATCCTTaGACTTCATGTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTVGLHP*TSCPHS
Trigger: ACTATGTGGACATGAAGTTCAAGGATGAAGACCTAC...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTAGGTCTTCATCCTTaGACTTCATGTCCACATAGT +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSVGLHP*TSCPHS
Trigger: ACTATGTGGACATGAAGTTCAAGGATGAAGACCTAC...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAAAATTGGCCAAACTaGGTTTCCATTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKKNWPN*VSILWA
Trigger: AGCCCAAAGAATGGAAACTCAGTTTGGCCAATTTTT...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGAACAAGAAGTCTCATTaGGACTCAGTATCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKNKKSH*DSVSEE
Trigger: TTCCTCAGATACTGAGTCTCAATGAGACTTCTTGTT...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAAACAAGAAGTCTCATTaGGACTCAGTATCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPNKKSH*DSVSEE
Trigger: TTCCTCAGATACTGAGTCTCAATGAGACTTCTTGTT...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCACACTTCCTTTCCATaGCTTCTGTACCAAATTTGT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKHTSFP*LLYQIC
Trigger: ACAAATTTGGTACAGAAGTCATGGAAAGGAAGTGTG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396886.7
ENST00000409143.5
ENST00000428900.6
CDS-3UTR TCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGCACACTTCCTTTCCATaGCTTCTGTACCAAATTTGT +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKHTSFP*LLYQIC
Trigger: ACAAATTTGGTACAGAAGTCATGGAAAGGAAGTGTG...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396886.7
ENST00000409143.5
ENST00000428900.6
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCTCCTCCTTGTCTTCTaGAAGTTCCTCAGATTCAAA +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTLLLVF*KFLRFK
Trigger: TTTGAATCTGAGGAACTTTCAGAAGACAAGGAGGAG...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409474.8
CDS-3UTR TCA 90 bp ACTCCTCCTTGTCTTCTGAAAGTTCCTCAGATTCAAATGTTTCTTCATCTTTGTCTCCTCCTTGTCTTCTaGAAGTTCCTCAGATTCAAA +
Preference number: 4 (lower is better)
Translates to: TPPCLLKVPQIQMFLHLCLLLVF*KFLRFK
Trigger: TTTGAATCTGAGGAACTTTCAGAAGACAAGGAGGAG...ACAAAGATGAAGAAACATTTGAATCTGAGGAACTTTCAGAAGACAAGGAGGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR GCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTACAAACAATCCTCATTaGTTCCTCACTCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCTNNPH*FLTLRD
Trigger: ATCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGT...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACAAACAATCCTCATTaGTTCCTCACTCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKTNNPH*FLTLRD
Trigger: ATCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGT...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTACAAACAATCCTCATTaGTTCCTCACTCTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTTNNPH*FLTLRD
Trigger: ATCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGT...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAGATCATGTGAAATCTaGGAAAGGTTCTCATACTCA +
Preference number: 4 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNRSCEI*ERFSYS
Trigger: TGAGTATGAGAACCTTTCGCAGATTTCACATGATCT...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGATCATGTGAAATCTaGGAAAGGTTCTCATACTCA +
Preference number: 4 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYRSCEI*ERFSYS
Trigger: TGAGTATGAGAACCTTTCGCAGATTTCACATGATCT...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTAGTACGAGTAGTGTGTaGCACAGCACTTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTSTSSV*HSTLKM
Trigger: CATTTTCAAAGTGCTGTGCCACACACTACTCGTACT...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAAGTACGAGTAGTGTGTaGCACAGCACTTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKSTSSV*HSTLKM
Trigger: CATTTTCAAAGTGCTGTGCCACACACTACTCGTACT...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTAGTACGAGTAGTGTGTaGCACAGCACTTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCSTSSV*HSTLKM
Trigger: CATTTTCAAAGTGCTGTGCCACACACTACTCGTACT...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTTAGATTGCAACTATaGATCGCTGTATCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAFRLQL*IAVSRV
Trigger: TACCCTTGATACAGCGATCCATAGTTGCAATCTAAA...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGTACTCCAGCATCCTGTaGCTATATATGAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRYSSIL*LYMRFS
Trigger: TGAAAACCTCATATATAGTCACAGGATGCTGGAGTA...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGAAAAATTGGCCAAACTaGGTTTCCATTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRKNWPN*VSILWA
Trigger: AGCCCAAAGAATGGAAACTCAGTTTGGCCAATTTTT...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTAAAAATTGGCCAAACTaGGTTTCCATTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCKNWPN*VSILWA
Trigger: AGCCCAAAGAATGGAAACTCAGTTTGGCCAATTTTT...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTAAAAATTGGCCAAACTaGGTTTCCATTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSKNWPN*VSILWA
Trigger: AGCCCAAAGAATGGAAACTCAGTTTGGCCAATTTTT...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTAAAAATTGGCCAAACTaGGTTTCCATTCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTKNWPN*VSILWA
Trigger: AGCCCAAAGAATGGAAACTCAGTTTGGCCAATTTTT...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAAACAAGAAGTCTCATTaGGACTCAGTATCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKNKKSH*DSVSEE
Trigger: TTCCTCAGATACTGAGTCTCAATGAGACTTCTTGTT...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTAACAAGAAGTCTCATTaGGACTCAGTATCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTNKKSH*DSVSEE
Trigger: TTCCTCAGATACTGAGTCTCAATGAGACTTCTTGTT...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGCTTAAAAAGATCATGTaGAATCTGCGAAAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKLKKIM*NLRKVL
Trigger: GAGAACCTTTCGCAGATTTCACATGATCTTTTTAAG...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACTTAAAAAGATCATGTaGAATCTGCGAAAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPLKKIM*NLRKVL
Trigger: GAGAACCTTTCGCAGATTTCACATGATCTTTTTAAG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGGAGAGTGAGAATTCTTaGTTGAGACTGCAAATAAGT +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKESENS*LRLQIS
Trigger: ACTTATTTGCAGTCTCAATCAAGAATTCTCACTCTC...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396886.7
ENST00000409143.5
CDS-3UTR TCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTCACACTTCCTTTCCATaGCTTCTGTACCAAATTTGT +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSHTSFP*LLYQIC
Trigger: ACAAATTTGGTACAGAAGTCATGGAAAGGAAGTGTG...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396886.7
ENST00000409143.5
ENST00000428900.6
CDS-3UTR GCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTTGTAAACATGCATGTTaGTCCTATCCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTCKHAC*SYPDKS
Trigger: GCTTTTGTCTGGATAGGAGCAACATGCATGTTTACA...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000620095.4
CDS-3UTR GCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTTGTAAACATGCATGTTaGTCCTATCCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSCKHAC*SYPDKS
Trigger: GCTTTTGTCTGGATAGGAGCAACATGCATGTTTACA...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAAGATCATGTGAAATCTaGGAAAGGTTCTCATACTCA +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPRSCEI*ERFSYS
Trigger: TGAGTATGAGAACCTTTCGCAGATTTCACATGATCT...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGAGATCATGTGAAATCTaGGAAAGGTTCTCATACTCA +
Preference number: 4 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGRSCEI*ERFSYS
Trigger: TGAGTATGAGAACCTTTCGCAGATTTCACATGATCT...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGAGATCATGTGAAATCTaGGAAAGGTTCTCATACTCA +
Preference number: 4 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKRSCEI*ERFSYS
Trigger: TGAGTATGAGAACCTTTCGCAGATTTCACATGATCT...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCATTTAGATTGCAACTATaGATCGCTGTATCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPFRLQL*IAVSRV
Trigger: TACCCTTGATACAGCGATCCATAGTTGCAATCTAAA...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTTTAGATTGCAACTATaGATCGCTGTATCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKFRLQL*IAVSRV
Trigger: TACCCTTGATACAGCGATCCATAGTTGCAATCTAAA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATTACTCCAGCATCCTGTaGCTATATATGAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHYSSIL*LYMRFS
Trigger: TGAAAACCTCATATATAGTCACAGGATGCTGGAGTA...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATAACAAGAAGTCTCATTaGGACTCAGTATCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHNKKSH*DSVSEE
Trigger: TTCCTCAGATACTGAGTCTCAATGAGACTTCTTGTT...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCTTAAAAAGATCATGTaGAATCTGCGAAAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTLKKIM*NLRKVL
Trigger: GAGAACCTTTCGCAGATTTCACATGATCTTTTTAAG...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGCTTAAAAAGATCATGTaGAATCTGCGAAAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRLKKIM*NLRKVL
Trigger: GAGAACCTTTCGCAGATTTCACATGATCTTTTTAAG...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTGAGAGTGAGAATTCTTaGTTGAGACTGCAAATAAGT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTESENS*LRLQIS
Trigger: ACTTATTTGCAGTCTCAATCAAGAATTCTCACTCTC...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396886.7
ENST00000409143.5
CDS-3UTR GCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATTGTAAACATGCATGTTaGTCCTATCCAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHCKHAC*SYPDKS
Trigger: GCTTTTGTCTGGATAGGAGCAACATGCATGTTTACA...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000620095.4
CDS-3UTR GCA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAACTGTTGTTTTAGATTaGAACTATGGATCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVTVVLD*NYGSLY
Trigger: ATACAGCGATCCATAGTTGCAATCTAAAACAACAGT...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGTTTAGATTGCAACTATaGATCGCTGTATCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRFRLQL*IAVSRV
Trigger: TACCCTTGATACAGCGATCCATAGTTGCAATCTAAA...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAATTTAGATTGCAACTATaGATCGCTGTATCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKFRLQL*IAVSRV
Trigger: TACCCTTGATACAGCGATCCATAGTTGCAATCTAAA...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTTTTAGATTGCAACTATaGATCGCTGTATCAAGGGTA +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSFRLQL*IAVSRV
Trigger: TACCCTTGATACAGCGATCCATAGTTGCAATCTAAA...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR TCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATCTTAAAAAGATCATGTaGAATCTGCGAAAGGTTCTC +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHLKKIM*NLRKVL
Trigger: GAGAACCTTTCGCAGATTTCACATGATCTTTTTAAG...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTACTGTTGTTTTAGATTaGAACTATGGATCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCTVVLD*NYGSLY
Trigger: ATACAGCGATCCATAGTTGCAATCTAAAACAACAGT...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTACTGTTGTTTTAGATTaGAACTATGGATCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSTVVLD*NYGSLY
Trigger: ATACAGCGATCCATAGTTGCAATCTAAAACAACAGT...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTACTGTTGTTTTAGATTaGAACTATGGATCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTTVVLD*NYGSLY
Trigger: ATACAGCGATCCATAGTTGCAATCTAAAACAACAGT...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR GCA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATAGATCATGTGAAATCTaGGAAAGGTTCTCATACTCA +
Preference number: 4 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHRSCEI*ERFSYS
Trigger: TGAGTATGAGAACCTTTCGCAGATTTCACATGATCT...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS CCA 90 bp TGGAAAGGCAATCCAGCGTCCATGCAGGGGATGTCGGGATCCTCCTaGGGCCAGTACTCAGTCATGGCACGGACGTACACCATCTGCTGG +
Preference number: 5 (lower is better)
Translates to: WKGNPASMQGMSGSS*GQYSVMARTYTICW
Trigger: CCAGCAGATGGTGTACGTCCGTGCCATGACTGAGTACTGGCCCCAGGAGGATCCCGACATCCCCTGCATGGACGCTGGATTGCCTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS-3UTR CAA 90 bp CACCTCCTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACTGGAGCCTGGAGCATTaGTCTCAGCTCTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: HLLVRGTHCTVAAAGAAHWSLEH*SQLLDL
Trigger: GAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCA...GTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CAA 90 bp CACCTCCTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACTCACTCTCAGGGATATaGTCTGGCAGTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: HLLVRGTHCTVAAAGAAHSLSGI*SGSGGR
Trigger: TCTCCCTCCACTGCCAGACAATATCCCTGAGAGTGA...GTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS GCA 90 bp GGGACAAGCCCAGCGCAGGTAGCAGGGTCTGAGATTTTTCGGGCCTaGCACCAGAGGGCATCATTCTGGTCCACAATCTGGAGGATGTCC +
Preference number: 5 (lower is better)
Translates to: GTSPAQVAGSEIFRA*HQRASFWSTIWRMS
Trigger: GGACATCCTCCAGATTGTGGACCAGAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGCGCTGGGCTTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS CCA 90 bp TTGTCTCCAGCATATAGCAACCCACTTCTCTCCGCCAGCCCACCGTaGATGATCCTGGCCACCAAGATGTCCCCTGTCATCTCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: LSPAYSNPLLSASPP*MILATKMSPVISWR
Trigger: GCGCCACGAGATGACAGGGGACATCTTGGTGGCCAGGATCATCCACGGTGGGCTGGCGGAGAGAAGTGGGTTGCTATATGCTGGAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS-3UTR CAA 90 bp CCTCCTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACACGGTGGATCTGCTCCTTaGTCTGACTGTATCATCCTC +
Preference number: 5 (lower is better)
Translates to: PPRKGHPLHCSSCRCSTHGGSAP*SDCIIL
Trigger: GAGGATGATACAGTCAGACAAAGGAGCAGATCCACC...GTGTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CAA 90 bp CACCTCCTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACCAGAATATGGATCACTaGTTCAGGGTCCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: HLLVRGTHCTVAAAGAAHQNMDH*FRVQSL
Trigger: GAGGGACTGGACCCTGAACAAGTGATCCATATTCTG...GTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CAA 90 bp CTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACACTGGCGAGACTGGAACCACCTaGAACATGATTGTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: LVRGTHCTVAAAGAAHTGETGTT*NMIVPR
Trigger: TCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTC...GCCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CAA 90 bp GGTCCCATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGTACCTCGTCGAGATAGTGCCATaGCACTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: GPMSTMRRYLSEGRRWYLVEIVP*HSSLGN
Trigger: GTTGCCCAGGCTGGAGTGCAATGGCACTATCTCGAC...GAGGTACCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS TCA 90 bp CAGAAGGTGGTTAGAAGGGACAAGCCCAGCGCAGGTAGCAGGGTCTaGGATTTTTCGGGCCTGCCACCAGAGGGCATCATTCTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: QKVVRRDKPSAGSRV*DFSGLPPEGIILVH
Trigger: GTGGACCAGAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGCGCTGGGCTTGTCCCTTCTAACCACCTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS-3UTR CAA 90 bp CCAGAGGGTCCCATGAGCACTATGAGGCGGTACTTGTCTGAAGGGCGTCGCTGGAGCTTCATGTCCTTCTaGTCTGGTGGATCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: PEGPMSTMRRYLSEGRRWSFMSF*SGGSAP
Trigger: AGGAGCAGATCCACCAGACAAGAAGGACATGAAGCT...CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGTGCTCATGGGACCCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CAA 90 bp CTCGTAAGGGGCACCCACTGCACTGTAGCAGCTGCCGGTGCAGCACACACTGGCAACAAACAATCCTCATaGCTTCCTCACTCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: LVRGTHCTVAAAGAAHTGNKQSS*LPHSQG
Trigger: TCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGTT...GCCAGTGTGTGCTGCACCGGCAGCTGCTACAGTGCAGTGGGTGCCCCTTACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS CCA 90 bp CTAGGAAGCGGGTCAATACACGGCACACAGCTCACTCAGTCCCACTaGCCACCAGCTCTCAGCACACTTCCTTTCCATGACTTCTGTACC +
Preference number: 5 (lower is better)
Translates to: LGSGSIHGTQLTQSH*PPALSTLPFHDFCT
Trigger: GGTACAGAAGTCATGGAAAGGAAGTGTGCTGAGAGCTGGTGGCCAGTGGGACTGAGTGAGCTGTGTGCCGTGTATTGACCCGCTTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396886.7
ENST00000409143.5
ENST00000428900.6
CDS CCA 90 bp CTAGGAAGCGGGTCAATACACGGCACACAGCTCACTCAGTCCCACTaGCCACCAGCTCTCAGCACACTGCAAGACTGTAAACATGCATGT +
Preference number: 5 (lower is better)
Translates to: LGSGSIHGTQLTQSH*PPALSTLQDCKHAC
Trigger: ACATGCATGTTTACAGTCTTGCAGTGTGCTGAGAGCTGGTGGCCAGTGGGACTGAGTGAGCTGTGTGCCGTGTATTGACCCGCTTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000483841.2
ENST00000620095.4
CDS-3UTR CAA 90 bp CTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGCACTATGAGGCGGCCACCAGAATTCCCGTaGCTTCCTCTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LLSSFTPTPEGPMSTMRRPPEFP*LPLQKV
Trigger: CACCTTCTGAAGAGGAAGCAACGGGAATTCTGGTGG...CCGCCTCATAGTGCTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS GCA 90 bp GCGAGTGGAGGAGATCGTACAAGAGACACACTCCATTCACATCTCTaGCGTAGAACAGACTCAGCTCTTGCAGCACAAGCCTCAGGATCT +
Preference number: 5 (lower is better)
Translates to: ASGGDRTRDTLHSHL*RRTDSALAAQASGS
Trigger: AGATCCTGAGGCTTGTGCTGCAAGAGCTGAGTCTGTTCTACGGCAGAGATGTGAATGGAGTGTGTCTCTTGTACGATCTCCTCCACTCGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000602867.1
ENST00000620095.4
CDS CCA 90 bp GATGTCGGGATCCATCTGCTGGCTATTCACAGGAGGGTCAGAGACTaGAACCACCTTGAACATGATTGTGCCTCGAGACATGGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: DVGIHLLAIHRRVRD*NHLEHDCASRHGQN
Trigger: ATTCTGGCCATGTCTCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCTGTGAATAGCCAGCAGATGGATCCCGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315506.11
CDS CCA 90 bp ACGGACGTACACCATCTGCTGGCTATTCACAGGAGGGTCAGAGACTaGAACCACCTTGAACATGATTGTGCCTCGAGACATGGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: TDVHHLLAIHRRVRD*NHLEHDCASRHGQN
Trigger: ATTCTGGCCATGTCTCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCTGTGAATAGCCAGCAGATGGTGTACGTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS CCA 90 bp GTGGCTCCCTTGAAGTGTGGAGCCTGGAGCATTTGTCTCAGCTCTTaGATCTCAGGGGAAGTAGGGGTTTCACGTAATAACTCCACTACC +
Preference number: 5 (lower is better)
Translates to: VAPLKCGAWSICLSS*ISGEVGVSRNNSTT
Trigger: GGTAGTGGAGTTATTACGTGAAACCCCTACTTCCCCTGAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCACACTTCAAGGGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396886.7
ENST00000483841.2
ENST00000486212.6
CDS CCA 90 bp AGCAAGGCCTTGAAGTGTGGAGCCTGGAGCATTTGTCTCAGCTCTTaGATCTCAGGGGAAGTAGGGGTTTCACGTAATAACTCCACTACC +
Preference number: 5 (lower is better)
Translates to: SKALKCGAWSICLSS*ISGEVGVSRNNSTT
Trigger: GGTAGTGGAGTTATTACGTGAAACCCCTACTTCCCCTGAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCACACTTCAAGGCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000602867.1
ENST00000620095.4
CDS CCA 90 bp CAGCTTCTCCTTCCAAGTGCCAGAACTACAGAAGATAGATGGGGGTaGAGGGTCATTTTACACATTTCTAGAGGAAAGGCCCATGGCCCC +
Preference number: 5 (lower is better)
Translates to: QLLLPSARTTEDRWG*RVILHISRGKAHGP
Trigger: GGGGCCATGGGCCTTTCCTCTAGAAATGTGTAAAATGACCCTCCACCCCCATCTATCTTCTGTAGTTCTGGCACTTGGAAGGAGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS-3UTR CAA 90 bp GCGGCGGAAGCCAGCTATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCCTTCATTTGTCTCAGCTCTaGGATCTCAGGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: AAEASYKELLTVANKLLLHLSQL*DLRGSR
Trigger: CCTACTTCCCCTGAGATCCAAGAGCTGAGACAAATG...AAGGAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATAGCTGGCTTCCGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CAA 90 bp TTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGGCACTGAGCAAGGCCTaGAAGTGTGGAGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: FNKLSSELIYSNTRGSHEALSKA*KCGAWS
Trigger: GCTCCAGGCTCCACACTTCAAGGCCTTGCTCAGTGC...CTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CAA 90 bp GCGGAAGCCAGCTATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCCTTGTCCATGGTATTCGGCAGTaGAGCCATGATGACAGTCAG +
Preference number: 5 (lower is better)
Translates to: AEASYKELLTVANKLLLVHGIRQ*SHDDSQ
Trigger: CTGACTGTCATCATGGCTCAACTGCCGAATACCATG...GACAAGGAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATAGCTGGCTTCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS TCA 90 bp GGCTCTAGGTCCATGACACAGATCTTTCCTTCGACAAGGACTGTTTaGACAGCATCCACACTAGTGCCATACAGGTGGCCTTTGTACTCA +
Preference number: 5 (lower is better)
Translates to: GSRSMTQIFPSTRTV*TASTLVPYRWPLYS
Trigger: TGAGTACAAAGGCCACCTGTATGGCACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGAAGGAAAGATCTGTGTCATGGACCTAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000447335.6
ENST00000620095.4
CDS TCA 90 bp ACTCCTCCTTGTCAGATTCAAATGTTTCTTCATATAGGGTTGACTTaGGGCAGGTGTGAGGCTGGTACGGCTGAGACCACCAGAATTCCC +
Preference number: 5 (lower is better)
Translates to: TPPCQIQMFLHIGLT*GRCEAGTAETTRIP
Trigger: GGGAATTCTGGTGGTCTCAGCCGTACCAGCCTCACACCTGCCTCAAGTCAACCCTATATGAAGAAACATTTGAATCTGACAAGGAGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428900.6
CDS-3UTR CAA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCACTGAGCAAGGCCTaGAAGTGTGGAGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPALSKA*KCGAWS
Trigger: GCTCCAGGCTCCACACTTCAAGGCCTTGCTCAGTGC...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAGCACTGAGCAAGGCCTaGAAGTGTGGAGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVALSKA*KCGAWS
Trigger: GCTCCAGGCTCCACACTTCAAGGCCTTGCTCAGTGC...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGGCACTGAGCAAGGCCTaGAAGTGTGGAGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGALSKA*KCGAWS
Trigger: GCTCCAGGCTCCACACTTCAAGGCCTTGCTCAGTGC...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAACTATGAGGCGGTACTaGTCTGAAGGGCGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPATMRRY*SEGRRW
Trigger: CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGT...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACACTATGAGGCGGTACTaGTCTGAAGGGCGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYTMRRY*SEGRRW
Trigger: CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGT...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAATTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATACTATGAGGCGGTACTaGTCTGAAGGGCGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: KFNKLSSELIYSNTRGSHTMRRY*SEGRRW
Trigger: CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGT...ATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS TCA 90 bp TCTTTTATAAGGGCACTAATCCCATTCATGAGGGCAGAGTGCTCATaGCCTAACCACCTGCTAAAGGCCCCGCCTCTTAATACTATTGCA +
Preference number: 5 (lower is better)
Translates to: SFIRALIPFMRAECS*PNHLLKAPPLNTIA
Trigger: TGCAATAGTATTAAGAGGCGGGGCCTTTAGCAGGTGGTTAGGTCATGAGCACTCTGCCCTCATGAATGGGATTAGTGCCCTTATAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483841.2
CDS CCA 90 bp TTACCACAGCTTCTCCTTCCAAGTGCCAGAACTACAGAAGATAGATaGGGGTGGAGGGTCATTTTACACATTTCTAGAGGAAAGGCCCAT +
Preference number: 5 (lower is better)
Translates to: LPQLLLPSARTTEDR*GWRVILHISRGKAH
Trigger: ATGGGCCTTTCCTCTAGAAATGTGTAAAATGACCCTCCACCCCCATCTATCTTCTGTAGTTCTGGCACTTGGAAGGAGAAGCTGTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS-3UTR CAA 90 bp TTCAATAAGTTGTCTTCTGAGCTCATTTACTCCAACACCAGAGGGTCCCATGAGAGGCCATTCTGTGGATaGGTGGCTGTAGAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: FNKLSSELIYSNTRGSHERPFCG*VAVESF
Trigger: GAAGCTTTCTACAGCCACCAATCCACAGAATGGCCT...CTCATGGGACCCTCTGGTGTTGGAGTAAATGAGCTCAGAAGACAACTTATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CAA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGGCACTGAGCAAGGCCTaGAAGTGTGGAGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRALSKA*KCGAWS
Trigger: GCTCCAGGCTCCACACTTCAAGGCCTTGCTCAGTGC...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GCGGAAGCCAGCTATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCCTTGTCTTCACTTCTACCAGTTaGTCTCCAGCATATAGCAAC +
Preference number: 5 (lower is better)
Translates to: AEASYKELLTVANKLLLVFTSTS*SPAYSN
Trigger: GTTGCTATATGCTGGAGACAAACTGGTAGAAGTGAA...GACAAGGAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATAGCTGGCTTCCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS-3UTR CAA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGACTATGAGGCGGTACTaGTCTGAAGGGCGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGTMRRY*SEGRRW
Trigger: CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGT...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGACTATGAGGCGGTACTaGTCTGAAGGGCGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKTMRRY*SEGRRW
Trigger: CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGT...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGTTGATGGTGGCTCCCTaGAAGTGTGGAGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKLMVAP*KCGAWS
Trigger: GCTCCAGGCTCCACACTTCAAGGGAGCCACCATCAA...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396886.7
CDS-3UTR CAA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACTGGAGCCTGGAGCATTaGTCTCAGCTCTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYWSLEH*SQLLDL
Trigger: GAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCA...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACTCACTCTCAGGGATATaGTCTGGCAGTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYSLSGI*SGSGGR
Trigger: TCTCCCTCCACTGCCAGACAATATCCCTGAGAGTGA...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGACTATGAGGCGGTACTaGTCTGAAGGGCGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRTMRRY*SEGRRW
Trigger: CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGT...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACCCATACAGGTGGCCTTaGTACTCACCATACTCCAGC +
Preference number: 5 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNPYRWP*YSPYSS
Trigger: GCTGGAGTATGGTGAGTACAAAGGCCACCTGTATGG...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTCATCTCGTGGCGCTaGATGGTGGCTCCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSVISWR*MVAPLK
Trigger: CTTCAAGGGAGCCACCATCAAGCGCCACGAGATGAC...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396886.7
CDS CCA 90 bp AAAGCACTGCTTTCTAGAACATTTTCTAGTAGATCAGTGGGAACCTaGAGACATTACCACAGCTTCTCCTTCCAAGTGCCAGAACTACAG +
Preference number: 5 (lower is better)
Translates to: KALLSRTFSSRSVGT*RHYHSFSFQVPELQ
Trigger: CTGTAGTTCTGGCACTTGGAAGGAGAAGCTGTGGTAATGTCTCCAGGTTCCCACTGATCTACTAGAAAATGTTCTAGAAAGCAGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS-3UTR CAA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAGCTTCATGTCCTTCTaGTCTGGTGGATCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNSFMSF*SGGSAP
Trigger: AGGAGCAGATCCACCAGACAAGAAGGACATGAAGCT...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAAGCTTCATGTCCTTCTaGTCTGGTGGATCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPASFMSF*SGGSAP
Trigger: AGGAGCAGATCCACCAGACAAGAAGGACATGAAGCT...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAGGCCATTCTGTGGATaGGTGGCTGTAGAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNRPFCG*VAVESF
Trigger: GAAGCTTTCTACAGCCACCAATCCACAGAATGGCCT...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACCATTTGTCTCAGCTCTaGGATCTCAGGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYHLSQL*DLRGSR
Trigger: CCTACTTCCCCTGAGATCCAAGAGCTGAGACAAATG...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGTGGAGCCTGGAGCATTaGTCTCAGCTCTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKWSLEH*SQLLDL
Trigger: GAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCA...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTGGAGCCTGGAGCATTaGTCTCAGCTCTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKWSLEH*SQLLDL
Trigger: GAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTATCACTCTCAGGGATATaGTCTGGCAGTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVSLSGI*SGSGGR
Trigger: TCTCCCTCCACTGCCAGACAATATCCCTGAGAGTGA...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCATCACTCTCAGGGATATaGTCTGGCAGTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPSLSGI*SGSGGR
Trigger: TCTCCCTCCACTGCCAGACAATATCCCTGAGAGTGA...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCCACCAGAATTCCCGTaGCTTCCTCTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKPPEFP*LPLQKV
Trigger: CACCTTCTGAAGAGGAAGCAACGGGAATTCTGGTGG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATACTATGAGGCGGTACTaGTCTGAAGGGCGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHTMRRY*SEGRRW
Trigger: CCAGCGACGCCCTTCAGACAAGTACCGCCTCATAGT...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCCATACAGGTGGCCTTaGTACTCACCATACTCCAGC +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKPYRWP*YSPYSS
Trigger: GCTGGAGTATGGTGAGTACAAAGGCCACCTGTATGG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGCCATACAGGTGGCCTTaGTACTCACCATACTCCAGC +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKPYRWP*YSPYSS
Trigger: GCTGGAGTATGGTGAGTACAAAGGCCACCTGTATGG...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCTGAGGAAATCCATGTaGCTGGTACCCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKLRKSM*LVPTEA
Trigger: AGCCTCAGTGGGTACCAGCAACATGGATTTCCTCAG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGCTGAGGAAATCCATGTaGCTGGTACCCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKLRKSM*LVPTEA
Trigger: AGCCTCAGTGGGTACCAGCAACATGGATTTCCTCAG...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS CCA 90 bp TCATTTACAAAGCACTGCTTTCTAGAACATTTTCTAGTAGATCAGTaGGAACCTGGAGACATTACCACAGCTTCTCCTTCCAAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: SFTKHCFLEHFLVDQ*EPGDITTASPSKCQ
Trigger: CTGGCACTTGGAAGGAGAAGCTGTGGTAATGTCTCCAGGTTCCCACTGATCTACTAGAAAATGTTCTAGAAAGCAGTGCTTTGTAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS-3UTR CAA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGGGTGGATCTGCTCCTTaGTCTGACTGTATCATCCTC +
Preference number: 5 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGGGSAP*SDCIIL
Trigger: GAGGATGATACAGTCAGACAAAGGAGCAGATCCACC...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAGGTGGATCTGCTCCTTaGTCTGACTGTATCATCCTC +
Preference number: 5 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVGGSAP*SDCIIL
Trigger: GAGGATGATACAGTCAGACAAAGGAGCAGATCCACC...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGGTGGATCTGCTCCTTaGTCTGACTGTATCATCCTC +
Preference number: 5 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPGGSAP*SDCIIL
Trigger: GAGGATGATACAGTCAGACAAAGGAGCAGATCCACC...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAAGCTTCATGTCCTTCTaGTCTGGTGGATCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVSFMSF*SGGSAP
Trigger: AGGAGCAGATCCACCAGACAAGAAGGACATGAAGCT...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAGCTTCATGTCCTTCTaGTCTGGTGGATCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKSFMSF*SGGSAP
Trigger: AGGAGCAGATCCACCAGACAAGAAGGACATGAAGCT...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGAGCTTCATGTCCTTCTaGTCTGGTGGATCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKSFMSF*SGGSAP
Trigger: AGGAGCAGATCCACCAGACAAGAAGGACATGAAGCT...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGAGGCCATTCTGTGGATaGGTGGCTGTAGAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKRPFCG*VAVESF
Trigger: GAAGCTTTCTACAGCCACCAATCCACAGAATGGCCT...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACATTTGTCTCAGCTCTaGGATCTCAGGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVHLSQL*DLRGSR
Trigger: CCTACTTCCCCTGAGATCCAAGAGCTGAGACAAATG...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACATTTGTCTCAGCTCTaGGATCTCAGGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPHLSQL*DLRGSR
Trigger: CCTACTTCCCCTGAGATCCAAGAGCTGAGACAAATG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCATTTGTCTCAGCTCTaGGATCTCAGGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKHLSQL*DLRGSR
Trigger: CCTACTTCCCCTGAGATCCAAGAGCTGAGACAAATG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGCATTTGTCTCAGCTCTaGGATCTCAGGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGHLSQL*DLRGSR
Trigger: CCTACTTCCCCTGAGATCCAAGAGCTGAGACAAATG...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTTGGAGCCTGGAGCATTaGTCTCAGCTCTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSWSLEH*SQLLDL
Trigger: GAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCA...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAATGGAGCCTGGAGCATTaGTCTCAGCTCTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKWSLEH*SQLLDL
Trigger: GAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCA...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAATCACTCTCAGGGATATaGTCTGGCAGTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKSLSGI*SGSGGR
Trigger: TCTCCCTCCACTGCCAGACAATATCCCTGAGAGTGA...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTTCACTCTCAGGGATATaGTCTGGCAGTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSSLSGI*SGSGGR
Trigger: TCTCCCTCCACTGCCAGACAATATCCCTGAGAGTGA...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCACAGAATATGGATCACTaGTTCAGGGTCCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPQNMDH*FRVQSL
Trigger: GAGGGACTGGACCCTGAACAAGTGATCCATATTCTG...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGCAGAATATGGATCACTaGTTCAGGGTCCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGQNMDH*FRVQSL
Trigger: GAGGGACTGGACCCTGAACAAGTGATCCATATTCTG...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGGAGACTGGAACCACCTaGAACATGATTGTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKETGTT*NMIVPR
Trigger: TCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTC...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGGAGACTGGAACCACCTaGAACATGATTGTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGETGTT*NMIVPR
Trigger: TCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTC...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGGAGACTGGAACCACCTaGAACATGATTGTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKETGTT*NMIVPR
Trigger: TCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTC...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGCCACCAGAATTCCCGTaGCTTCCTCTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRPPEFP*LPLQKV
Trigger: CACCTTCTGAAGAGGAAGCAACGGGAATTCTGGTGG...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTCCACCAGAATTCCCGTaGCTTCCTCTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSPPEFP*LPLQKV
Trigger: CACCTTCTGAAGAGGAAGCAACGGGAATTCTGGTGG...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAACCACCAGAATTCCCGTaGCTTCCTCTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKPPEFP*LPLQKV
Trigger: CACCTTCTGAAGAGGAAGCAACGGGAATTCTGGTGG...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTCCACCAGAATTCCCGTaGCTTCCTCTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCPPEFP*LPLQKV
Trigger: CACCTTCTGAAGAGGAAGCAACGGGAATTCTGGTGG...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTCTGAGGAAATCCATGTaGCTGGTACCCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCLRKSM*LVPTEA
Trigger: AGCCTCAGTGGGTACCAGCAACATGGATTTCCTCAG...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCTGAGGAAATCCATGTaGCTGGTACCCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTLRKSM*LVPTEA
Trigger: AGCCTCAGTGGGTACCAGCAACATGGATTTCCTCAG...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTCTGAGGAAATCCATGTaGCTGGTACCCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSLRKSM*LVPTEA
Trigger: AGCCTCAGTGGGTACCAGCAACATGGATTTCCTCAG...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAACTGAGGAAATCCATGTaGCTGGTACCCACTGAGGCT +
Preference number: 5 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKLRKSM*LVPTEA
Trigger: AGCCTCAGTGGGTACCAGCAACATGGATTTCCTCAG...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAGGTGGATCTGCTCCTTaGTCTGACTGTATCATCCTC +
Preference number: 5 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKGGSAP*SDCIIL
Trigger: GAGGATGATACAGTCAGACAAAGGAGCAGATCCACC...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTAGCTTCATGTCCTTCTaGTCTGGTGGATCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTSFMSF*SGGSAP
Trigger: AGGAGCAGATCCACCAGACAAGAAGGACATGAAGCT...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTAGGCCATTCTGTGGATaGGTGGCTGTAGAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTRPFCG*VAVESF
Trigger: GAAGCTTTCTACAGCCACCAATCCACAGAATGGCCT...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTAGGCCATTCTGTGGATaGGTGGCTGTAGAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCRPFCG*VAVESF
Trigger: GAAGCTTTCTACAGCCACCAATCCACAGAATGGCCT...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTCATTTGTCTCAGCTCTaGGATCTCAGGGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSHLSQL*DLRGSR
Trigger: CCTACTTCCCCTGAGATCCAAGAGCTGAGACAAATG...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATTGGAGCCTGGAGCATTaGTCTCAGCTCTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHWSLEH*SQLLDL
Trigger: GAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCA...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGCAGAATATGGATCACTaGTTCAGGGTCCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRQNMDH*FRVQSL
Trigger: GAGGGACTGGACCCTGAACAAGTGATCCATATTCTG...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTCAGAATATGGATCACTaGTTCAGGGTCCAGTCCCTC +
Preference number: 5 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCQNMDH*FRVQSL
Trigger: GAGGGACTGGACCCTGAACAAGTGATCCATATTCTG...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGAGACTGGAACCACCTaGAACATGATTGTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSETGTT*NMIVPR
Trigger: TCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTC...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTGAGACTGGAACCACCTaGAACATGATTGTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCETGTT*NMIVPR
Trigger: TCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTC...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATCCACCAGAATTCCCGTaGCTTCCTCTTCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHPPEFP*LPLQKV
Trigger: CACCTTCTGAAGAGGAAGCAACGGGAATTCTGGTGG...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAGTGTGGCACAGCACTTaGAAAATGGCTGGGATTAAA +
Preference number: 5 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAVWHST*KMAGIK
Trigger: TTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACAC...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATCCATACAGGTGGCCTTaGTACTCACCATACTCCAGC +
Preference number: 5 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHPYRWP*YSPYSS
Trigger: GCTGGAGTATGGTGAGTACAAAGGCCACCTGTATGG...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACTTCGACAAGGACTGTTaGAACAGCATCCACACTAGT +
Preference number: 5 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNFDKDC*NSIHTS
Trigger: ACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGAA...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTCGACAAGGACTGTTaGAACAGCATCCACACTAGT +
Preference number: 5 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAFDKDC*NSIHTS
Trigger: ACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGAA...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACCCAACAAACTCCTCCTaGTCTTCTGAAAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: CNYGSLYQGYSVKTPALNPTNSS*SSESSS
Trigger: TGAGGAACTTTCAGAAGACAAGGAGGAGTTTGTTGG...GTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409474.8
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAACAAACAATCCTCATaGCTTCCTCACTCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKNKQSS*LPHSQG
Trigger: TCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGTT...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAAACAAACAATCCTCATaGCTTCCTCACTCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVNKQSS*LPHSQG
Trigger: TCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGTT...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACTTCACTTCTACCAGTTaGTCTCCAGCATATAGCAAC +
Preference number: 5 (lower is better)
Translates to: GSNTVVLDCNYGSLYQGYFTSTS*SPAYSN
Trigger: GTTGCTATATGCTGGAGACAAACTGGTAGAAGTGAA...GTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATGAGACTGGAACCACCTaGAACATGATTGTGCCTCGA +
Preference number: 5 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHETGTT*NMIVPR
Trigger: TCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTC...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGGTGTGGCACAGCACTTaGAAAATGGCTGGGATTAAA +
Preference number: 5 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGVWHST*KMAGIK
Trigger: TTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACAC...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGGTGTGGCACAGCACTTaGAAAATGGCTGGGATTAAA +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKVWHST*KMAGIK
Trigger: TTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACAC...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGGTGTGGCACAGCACTTaGAAAATGGCTGGGATTAAA +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKVWHST*KMAGIK
Trigger: TTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACAC...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGTTCGACAAGGACTGTTaGAACAGCATCCACACTAGT +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKFDKDC*NSIHTS
Trigger: ACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGAA...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCATTCGACAAGGACTGTTaGAACAGCATCCACACTAGT +
Preference number: 5 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPFDKDC*NSIHTS
Trigger: ACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGAA...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGTTCGACAAGGACTGTTaGAACAGCATCCACACTAGT +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKFDKDC*NSIHTS
Trigger: ACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGAA...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGCCAACAAACTCCTCCTaGTCTTCTGAAAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: NYGSLYQGYSVKTPALNKPTNSS*SSESSS
Trigger: AGAGGAACTTTCAGAAGACAAGGAGGAGTTTGTTGG...CTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359962.9
CDS TCA 90 bp CAGTTGAAGCTTATCTATTTCTGCTATCTTGAGAGTGAGAATTCTTaGTTGAGACTGCAAATAAGTAAGCACCCACCACATGCAATTCCG +
Preference number: 5 (lower is better)
Translates to: QLKLIYFCYLESENS*LRLQISKHPPHAIP
Trigger: CGGAATTGCATGTGGTGGGTGCTTACTTATTTGCAGTCTCAATCAAGAATTCTCACTCTCAAGATAGCAGAAATAGATAAGCTTCAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396886.7
ENST00000409143.5
CDS TCA 90 bp TATAAAGAACTTCTGACCGTAGCCAACAAACTCCTCCTTGTCTTCTaGAAGTTCCTCAGATTCAAATGTTTCTTCATCTGCTTCCACACA +
Preference number: 5 (lower is better)
Translates to: YKELLTVANKLLLVF*KFLRFKCFFICFHT
Trigger: TGTGTGGAAGCAGATGAAGAAACATTTGAATCTGAGGAACTTTCAGAAGACAAGGAGGAGTTTGTTGGCTACGGTCAGAAGTTCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409474.8
CDS TCA 90 bp TTCACAAAGAGCAGAGGTTTCCAAGTGTTCTACCATCGGATATGCTaGGAGTTACTAAGTGTTCTTGAGATCATTTACAAAGCACTGCTT +
Preference number: 5 (lower is better)
Translates to: FTKSRGFQVFYHRIC*ELLSVLEIIYKALL
Trigger: AAGCAGTGCTTTGTAAATGATCTCAAGAACACTTAGTAACTCTCAGCATATCCGATGGTAGAACACTTGGAAACCTCTGCTCTTTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS-3UTR CAA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTAACAAACAATCCTCATaGCTTCCTCACTCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSNKQSS*LPHSQG
Trigger: TCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGTT...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAAACAAACAATCCTCATaGCTTCCTCACTCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKNKQSS*LPHSQG
Trigger: TCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGTT...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTGTGGCACAGCACTTaGAAAATGGCTGGGATTAAA +
Preference number: 5 (lower is better)
Translates to: SNTVVLDCNYGSLYQGYSVWHST*KMAGIK
Trigger: TTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACAC...ACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAGTGTGGCACAGCACTTaGAAAATGGCTGGGATTAAA +
Preference number: 5 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKVWHST*KMAGIK
Trigger: TTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACAC...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp ACTCCTCCTTGTCTTCTGAAAGTTCCTCAGATTCAAATGTTTCTTCATCTTTGTCCAACAAACTCCTCCTaGTCTTCTGAAAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: TPPCLLKVPQIQMFLHLCPTNSS*SSESSS
Trigger: TGAGGAACTTTCAGAAGACAAGGAGGAGTTTGTTGG...ACAAAGATGAAGAAACATTTGAATCTGAGGAACTTTCAGAAGACAAGGAGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS TCA 90 bp GTGTGTGTGTGTTCATTCATCTGCTTGTCCCTCTTTATCTCATCTTaGGGTAACAGAAACCCAAGAAAAACATTTTGTTTCCTGATGGTT +
Preference number: 5 (lower is better)
Translates to: VCVCSFICLSLFISS*GNRNPRKTFCFLMV
Trigger: AACCATCAGGAAACAAAATGTTTTTCTTGGGTTTCTGTTACCTCAAGATGAGATAAAGAGGGACAAGCAGATGAATGAACACACACACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483841.2
CDS CCA 90 bp TGTAAAGCAAAGACAGATTCACCTGTCAGACTAAGGTTCTCCAACTaGTCTCCTAACAAAATCCTAGTGATTCTTAAGCCAATCTTAGTT +
Preference number: 5 (lower is better)
Translates to: CKAKTDSPVRLRFSN*SPNKILVILKPILV
Trigger: AACTAAGATTGGCTTAAGAATCACTAGGATTTTGTTAGGAGACCAGTTGGAGAACCTTAGTCTGACAGGTGAATCTGTCTTTGCTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS-3UTR CAA 90 bp ACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAATTCACTTCTACCAGTTaGTCTCCAGCATATAGCAAC +
Preference number: 5 (lower is better)
Translates to: TVVLDCNYGSLYQGYSVKFTSTS*SPAYSN
Trigger: GTTGCTATATGCTGGAGACAAACTGGTAGAAGTGAA...TTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTTCACTTCTACCAGTTaGTCTCCAGCATATAGCAAC +
Preference number: 5 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCFTSTS*SPAYSN
Trigger: GTTGCTATATGCTGGAGACAAACTGGTAGAAGTGAA...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp CTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATATGAGGTTCACTTCTACCAGTTaGTCTCCAGCATATAGCAAC +
Preference number: 5 (lower is better)
Translates to: LILSDLTLFIFLPQLHMRFTSTS*SPAYSN
Trigger: GTTGCTATATGCTGGAGACAAACTGGTAGAAGTGAA...CCTCATATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTTTCACTTCTACCAGTTaGTCTCCAGCATATAGCAAC +
Preference number: 5 (lower is better)
Translates to: VVLDCNYGSLYQGYSVKTFTSTS*SPAYSN
Trigger: GTTGCTATATGCTGGAGACAAACTGGTAGAAGTGAA...AGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATGTGTGGCACAGCACTTaGAAAATGGCTGGGATTAAA +
Preference number: 5 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHVWHST*KMAGIK
Trigger: TTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACAC...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCAGGCATTTTTCCGAGATaGTTTCATACACCTCATATT +
Preference number: 5 (lower is better)
Translates to: LDCNYGSLYQGYSVKTPAGIFPR*FHTPHI
Trigger: AATATGAGGTGTATGAAACAATCTCGGAAAAATGCC...TGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGCCAACAAACTCCTCCTaGTCAGATTCAAATGTTTCT +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKPTNSS*SDSNVS
Trigger: AGAAACATTTGAATCTGACAAGGAGGAGTTTGTTGG...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428900.6
CDS TCA 90 bp CTCAGCACACTTCCTTTCCATGACTTCTGTACCAAATTTGTCAGTTaGAGCTTATCTATTTCTGCTATCTTGAGAGTGAGAATTCTTGAT +
Preference number: 5 (lower is better)
Translates to: LSTLPFHDFCTKFVS*SLSISAILRVRILD
Trigger: ATCAAGAATTCTCACTCTCAAGATAGCAGAAATAGATAAGCTTCAACTGACAAATTTGGTACAGAAGTCATGGAAAGGAAGTGTGCTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396886.7
ENST00000409143.5
CDS-3UTR CAA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATTTCACTTCTACCAGTTaGTCTCCAGCATATAGCAAC +
Preference number: 5 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHFTSTS*SPAYSN
Trigger: GTTGCTATATGCTGGAGACAAACTGGTAGAAGTGAA...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp GTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGGCATTTTTCCGAGATaGTTTCATACACCTCATATT +
Preference number: 5 (lower is better)
Translates to: VLDCNYGSLYQGYSVKTPGIFPR*FHTPHI
Trigger: AATATGAGGTGTATGAAACAATCTCGGAAAAATGCC...TGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AATGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGGGCATTTTTCCGAGATaGTTTCATACACCTCATATT +
Preference number: 5 (lower is better)
Translates to: NGSNTVVLDCNYGSLYQGGIFPR*FHTPHI
Trigger: AATATGAGGTGTATGAAACAATCTCGGAAAAATGCC...CCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TGGGTCAAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTAGGCATTTTTCCGAGATaGTTTCATACACCTCATATT +
Preference number: 5 (lower is better)
Translates to: WVKYCCFRLQLWIAVSRVGIFPR*FHTPHI
Trigger: AATATGAGGTGTATGAAACAATCTCGGAAAAATGCC...TACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTTGACCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp TATGGATCGCTGTATCAAGGGTACAGTGTTAAAACTCCAGCATTAAACAAGAAGGGCATTTTTCCGAGATaGTTTCATACACCTCATATT +
Preference number: 5 (lower is better)
Translates to: YGSLYQGYSVKTPALNKKGIFPR*FHTPHI
Trigger: AATATGAGGTGTATGAAACAATCTCGGAAAAATGCC...CTTCTTGTTTAATGCTGGAGTTTTAACACTGTACCCTTGATACAGCGATCCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAATACTGTTGTTTTAGATTGCAACTATGGATCGCTGTATCAAGGGTACAGTGTGGCATTTTTCCGAGATaGTTTCATACACCTCATATT +
Preference number: 5 (lower is better)
Translates to: KYCCFRLQLWIAVSRVQCGIFPR*FHTPHI
Trigger: AATATGAGGTGTATGAAACAATCTCGGAAAAATGCC...ACACTGTACCCTTGATACAGCGATCCATAGTTGCAATCTAAAACAACAGTATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS-3UTR CAA 90 bp AAGGTTCTCATACTCAGTGACTTAACATTATTCATATTTCTACCACAGCTGCATGGCATTTTTCCGAGATaGTTTCATACACCTCATATT +
Preference number: 5 (lower is better)
Translates to: KVLILSDLTLFIFLPQLHGIFPR*FHTPHI
Trigger: AATATGAGGTGTATGAAACAATCTCGGAAAAATGCC...ATGCAGCTGTGGTAGAAATATGAATAATGTTAAGTCACTGAGTATGAGAACCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000428900.6
ENST00000620095.4
CDS CCA 72 bp AATCCAGCGTCCATGCAGGGGATGTCGGGATCCTCCTaGGGCCAGTACTCAGTCATGGCACGGACGTACACC +
Preference number: 6 (lower is better)
Translates to: NPASMQGMSGSS*GQYSVMARTYT
Trigger: GGTGTACGTCCGTGCCATGACTGAGTACTGGCCCCAGGAGGATCCCGACATCCCCTGCATGGACGCTGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS CAA 72 bp CTGGCCACCAAGATGTCCCCTGTCATCTCGTGGCGCTaGATGGTGGCTCCCTTGAAGTGTGGAGCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LATKMSPVISWR*MVAPLKCGAWS
Trigger: GCTCCAGGCTCCACACTTCAAGGGAGCCACCATCAAGCGCCACGAGATGACAGGGGACATCTTGGTGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396886.7
ENST00000483841.2
ENST00000486212.6
CDS GCA 72 bp CCAGCGCAGGTAGCAGGGTCTGAGATTTTTCGGGCCTaGCACCAGAGGGCATCATTCTGGTCCACAATCTGG +
Preference number: 6 (lower is better)
Translates to: PAQVAGSEIFRA*HQRASFWSTIW
Trigger: CCAGATTGTGGACCAGAATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGCGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS CCA 72 bp GCATATAGCAACCCACTTCTCTCCGCCAGCCCACCGTaGATGATCCTGGCCACCAAGATGTCCCCTGTCATC +
Preference number: 6 (lower is better)
Translates to: AYSNPLLSASPP*MILATKMSPVI
Trigger: GATGACAGGGGACATCTTGGTGGCCAGGATCATCCACGGTGGGCTGGCGGAGAGAAGTGGGTTGCTATATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS CCA 72 bp GGATGTCGGGATCCTCCTGGGGCCAGTACTCAGTCATaGCACGGACGTACACCATCTGCTGGCTATTCACAG +
Preference number: 6 (lower is better)
Translates to: GCRDPPGASTQS*HGRTPSAGYSQ
Trigger: CTGTGAATAGCCAGCAGATGGTGTACGTCCGTGCCATGACTGAGTACTGGCCCCAGGAGGATCCCGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS CCA 72 bp GCAGTGTCTGGCGAGGGCCACTCCGTGACTCATAAATaGCACCTTTTAGCTGGGTCCTCCCATGGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: AVSGEGHSVTHK*HLLAGSSHGGR
Trigger: CCTTCCACCATGGGAGGACCCAGCTAAAAGGTGCCATTTATGAGTCACGGAGTGGCCCTCGCCAGACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483841.2
CDS TCA 72 bp GTTAGAAGGGACAAGCCCAGCGCAGGTAGCAGGGTCTaGGATTTTTCGGGCCTGCCACCAGAGGGCATCATT +
Preference number: 6 (lower is better)
Translates to: VRRDKPSAGSRV*DFSGLPPEGII
Trigger: AATGATGCCCTCTGGTGGCAGGCCCGAAAAATCTCAGACCCTGCTACCTGCGCTGGGCTTGTCCCTTCTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS CCA 72 bp TCATGGGCACTGAGCAAGGCCTTGAAGTGTGGAGCCTaGAGCATTTGTCTCAGCTCTTGGATCTCAGGGGAA +
Preference number: 6 (lower is better)
Translates to: SWALSKALKCGA*SICLSSWISGE
Trigger: TTCCCCTGAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCACACTTCAAGGCCTTGCTCAGTGCCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000602867.1
ENST00000620095.4
CDS CAA 90 bp TCAGGGTCCAGTCCCTCAACTGAAACTCCATTCACTTCTACCAGTTaGTCTCCAGCATATAGCAACCCACTTCTCTCCGCCAGCCCACCG +
Preference number: 6 (lower is better)
Translates to: SGSSPSTETPFTSTS*SPAYSNPLLSASPP
Trigger: CGGTGGGCTGGCGGAGAGAAGTGGGTTGCTATATGCTGGAGACAAACTGGTAGAAGTGAATGGAGTTTCAGTTGAGGGACTGGACCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS GCA 72 bp CAGTGGCTGAGCCTGGGACTGCTGCTTCTTTCTATTTaGACGCCCTCCCTTGGTAGCTTGTCAAAACTCAGT +
Preference number: 6 (lower is better)
Translates to: QWLSLGLLLLSI*TPSLGSLSKLS
Trigger: ACTGAGTTTTGACAAGCTACCAAGGGAGGGCGTGCAAATAGAAAGAAGCAGCAGTCCCAGGCTCAGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483841.2
CDS CCA 72 bp CACCATCTGCTGGCTATTCACAGGAGGGTCAGAGACTaGAACCACCTTGAACATGATTGTGCCTCGAGACAT +
Preference number: 6 (lower is better)
Translates to: HHLLAIHRRVRD*NHLEHDCASRH
Trigger: ATGTCTCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCTGTGAATAGCCAGCAGATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS CAA 72 bp AGCTTCATGTCCTTCTTGTCTGGTGGATCTGCTCCTTaGTCTGACTGTATCATCCTCCCTGCCGGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: SFMSFLSGGSAP*SDCIILPAGAS
Trigger: AGAAGCTCCGGCAGGGAGGATGATACAGTCAGACAAAGGAGCAGATCCACCAGACAAGAAGGACATGAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000602867.1
ENST00000620095.4
CDS CAA 90 bp TCCATCTGCTGGCTATTCACAGGAGGGTCAGAGACTGGAACCACCTaGAACATGATTGTGCCTCGAGACATGGCCAGAATATGGATCACT +
Preference number: 6 (lower is better)
Translates to: SICWLFTGGSETGTT*NMIVPRDMARIWIT
Trigger: AGTGATCCATATTCTGGCCATGTCTCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCTGTGAATAGCCAGCAGATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315506.11
CDS CAA 90 bp ACCATCTGCTGGCTATTCACAGGAGGGTCAGAGACTGGAACCACCTaGAACATGATTGTGCCTCGAGACATGGCCAGAATATGGATCACT +
Preference number: 6 (lower is better)
Translates to: TICWLFTGGSETGTT*NMIVPRDMARIWIT
Trigger: AGTGATCCATATTCTGGCCATGTCTCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCTGTGAATAGCCAGCAGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS CCA 72 bp ATCCATCTGCTGGCTATTCACAGGAGGGTCAGAGACTaGAACCACCTTGAACATGATTGTGCCTCGAGACAT +
Preference number: 6 (lower is better)
Translates to: IHLLAIHRRVRD*NHLEHDCASRH
Trigger: ATGTCTCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCTGTGAATAGCCAGCAGATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315506.11
CDS CAA 72 bp TGGCTATTCACAGGAGGGTCAGAGACTGGAACCACCTaGAACATGATTGTGCCTCGAGACATGGCCAGAATA +
Preference number: 6 (lower is better)
Translates to: WLFTGGSETGTT*NMIVPRDMARI
Trigger: TATTCTGGCCATGTCTCGAGGCACAATCATGTTCAAGGTGGTTCCAGTCTCTGACCCTCCTGTGAATAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS CAA 72 bp GTCCATGACACAGATCTTTCCTTCGACAAGGACTGTTaGAACAGCATCCACACTAGTGCCATACAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: VHDTDLSFDKDC*NSIHTSAIQVA
Trigger: GGCCACCTGTATGGCACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGAAGGAAAGATCTGTGTCATGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000447335.6
ENST00000620095.4
CDS CAA 72 bp AGTCTCATTGAGACTCAGTATCTGAGGAAATCCATGTaGCTGGTACCCACTGAGGCTCCTCCTGAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: SLIETQYLRKSM*LVPTEAPPEPS
Trigger: AGAAGGCTCAGGAGGAGCCTCAGTGGGTACCAGCAACATGGATTTCCTCAGATACTGAGTCTCAATGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000447335.6
ENST00000620095.4
CDS CAA 90 bp AGGCCATTCTGTGGATTGGTGGCTGTAGAAAGCTTCATGTCCTTCTaGTCTGGTGGATCTGCTCCTTTGTCTGACTGTATCATCCTCCCT +
Preference number: 6 (lower is better)
Translates to: RPFCGLVAVESFMSF*SGGSAPLSDCIILP
Trigger: AGGGAGGATGATACAGTCAGACAAAGGAGCAGATCCACCAGACAAGAAGGACATGAAGCTTTCTACAGCCACCAATCCACAGAATGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000602867.1
ENST00000620095.4
CDS CAA 90 bp TGGCTCCCAGGGGCTGTTGGTTTTTCACTAAACAAACAATCCTCATaGCTTCCTCACTCTCAGGGATATTGTCTGGCAGTGGAGGGAGAA +
Preference number: 6 (lower is better)
Translates to: WLPGAVGFSLNKQSS*LPHSQGYCLAVEGE
Trigger: TTCTCCCTCCACTGCCAGACAATATCCCTGAGAGTGAGGAAGCAATGAGGATTGTTTGTTTAGTGAAAAACCAACAGCCCCTGGGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000620095.4
CDS TCA 72 bp TCCATGACACAGATCTTTCCTTCGACAAGGACTGTTTaGACAGCATCCACACTAGTGCCATACAGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: SMTQIFPSTRTV*TASTLVPYRWP
Trigger: AGGCCACCTGTATGGCACTAGTGTGGATGCTGTTCAAACAGTCCTTGTCGAAGGAAAGATCTGTGTCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000447335.6
ENST00000620095.4
CDS GCA 72 bp CTGAGCCTTCTGTATGGCAGACAACAACTGGGCACATaGATCGTGCAAGCTGTCATTCACAATCACATGATC +
Preference number: 6 (lower is better)
Translates to: LSLLYGRQQLGT*IVQAVIHNHMI
Trigger: GATCATGTGATTGTGAATGACAGCTTGCACGATGCATGTGCCCAGTTGTTGTCTGCCATACAGAAGGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000447335.6
ENST00000620095.4
CDS CCA 72 bp TTGAAGTGTGGAGCCTGGAGCATTTGTCTCAGCTCTTaGATCTCAGGGGAAGTAGGGGTTTCACGTAATAAC +
Preference number: 6 (lower is better)
Translates to: LKCGAWSICLSS*ISGEVGVSRNN
Trigger: GTTATTACGTGAAACCCCTACTTCCCCTGAGATCCAAGAGCTGAGACAAATGCTCCAGGCTCCACACTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000602867.1
ENST00000620095.4
CDS CAA 72 bp AGTCCCTCAACTGAAACTCCATTCACTTCTACCAGTTaGTCTCCAGCATATAGCAACCCACTTCTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: SPSTETPFTSTS*SPAYSNPLLSA
Trigger: GGCGGAGAGAAGTGGGTTGCTATATGCTGGAGACAAACTGGTAGAAGTGAATGGAGTTTCAGTTGAGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS TCA 72 bp TCCCTTGGTAGCTTGTCAAAACTCAGTAGCATAAGGTaGGGGTGGTGGGTTGAAATTGAGGTCTCAACTCAG +
Preference number: 6 (lower is better)
Translates to: SLGSLSKLSSIR*GWWVEIEVSTQ
Trigger: CTGAGTTGAGACCTCAATTTCAACCCACCACCCTCACCTTATGCTACTGAGTTTTGACAAGCTACCAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483841.2
CDS CCA 72 bp CATTGCTTCCTCACTCTCAGGGATATTGTCTGGCAGTaGAGGGAGAAGGGGTTCAAAATCTTTCTGAGCTAT +
Preference number: 6 (lower is better)
Translates to: HCFLTLRDIVWQ*REKGFKIFLSY
Trigger: ATAGCTCAGAAAGATTTTGAACCCCTTCTCCCTCCACTGCCAGACAATATCCCTGAGAGTGAGGAAGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000602867.1
ENST00000620095.4
CDS CCA 72 bp CTTCCAAGTGCCAGAACTACAGAAGATAGATGGGGGTaGAGGGTCATTTTACACATTTCTAGAGGAAAGGCC +
Preference number: 6 (lower is better)
Translates to: LPSARTTEDRWG*RVILHISRGKA
Trigger: GGCCTTTCCTCTAGAAATGTGTAAAATGACCCTCCACCCCCATCTATCTTCTGTAGTTCTGGCACTTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS TCA 72 bp AATATGGATCACTTGTTCAGGGTCCAGTCCCTCAACTaGAACTCCATTCACTTCTACCAGTTTGTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: NMDHLFRVQSLN*NSIHFYQFVSS
Trigger: GCTGGAGACAAACTGGTAGAAGTGAATGGAGTTTCAGTTGAGGGACTGGACCCTGAACAAGTGATCCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000409818.7
ENST00000428900.6
ENST00000447335.6
ENST00000483841.2
ENST00000486212.6
ENST00000620095.4
CDS TCA 72 bp TTCGAACCCCTTGAATATCCTGAGGCTCTAGGTCCATaGCACAGATCTTTCCTTCGACAAGGACTGTTTGAA +
Preference number: 6 (lower is better)
Translates to: FEPLEYPEALGP*HRSFLRQGLFE
Trigger: TTCAAACAGTCCTTGTCGAAGGAAAGATCTGTGTCATGGACCTAGAGCCTCAGGATATTCAAGGGGTTCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000447335.6
ENST00000620095.4
CDS CCA 72 bp CTTCTCCTTCCAAGTGCCAGAACTACAGAAGATAGATaGGGGTGGAGGGTCATTTTACACATTTCTAGAGGA +
Preference number: 6 (lower is better)
Translates to: LLLPSARTTEDR*GWRVILHISRG
Trigger: TCCTCTAGAAATGTGTAAAATGACCCTCCACCCCCATCTATCTTCTGTAGTTCTGGCACTTGGAAGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS CCA 72 bp AACAACAGAGATGTATTTGCTCATAGTTCTGGAAGCTaGGAAGTCCAAGATCAAGGAGCCAGTGGATGCAGT +
Preference number: 6 (lower is better)
Translates to: NNRDVFAHSSGS*EVQDQGASGCS
Trigger: ACTGCATCCACTGGCTCCTTGATCTTGGACTTCCCAGCTTCCAGAACTATGAGCAAATACATCTCTGTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483841.2
CDS TCA 72 bp AGCATTAAACAAGAAGTCTCATTGAGACTCAGTATCTaGGGAAATCCATGTTGCTGGTACCCACTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: SIKQEVSLRLSI*GNPCCWYPLRL
Trigger: GAGCCTCAGTGGGTACCAGCAACATGGATTTCCTCAGATACTGAGTCTCAATGAGACTTCTTGTTTAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000447335.6
ENST00000620095.4
CDS GCA 72 bp CTGCCGGAGCTTCTGCAAGACTGTAAACATGCATGTTaGTCCTATCCAGACAAAAGCTTTAGTAGGATACTA +
Preference number: 6 (lower is better)
Translates to: LPELLQDCKHAC*SYPDKSFSRIL
Trigger: TAGTATCCTACTAAAGCTTTTGTCTGGATAGGAGCAACATGCATGTTTACAGTCTTGCAGAAGCTCCGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409818.7
ENST00000486212.6
CDS GCA 72 bp CAAGAGCGAAACTCCATCTTCTTCCATAGAAATTGCTaGACGTTCTGCACATGTATCCCAGAAATAGGGTTG +
Preference number: 6 (lower is better)
Translates to: QERNSIFFHRNC*TFCTCIPEIGL
Trigger: CAACCCTATTTCTGGGATACATGTGCAGAACGTGCAGCAATTTCTATGGAAGAAGATGGAGTTTCGCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS GCA 72 bp CAACAAGAGCGAAACTCCATCTTCTTCCATAGAAATTaGTGCACGTTCTGCACATGTATCCCAGAAATAGGG +
Preference number: 6 (lower is better)
Translates to: QQERNSIFFHRN*CTFCTCIPEIG
Trigger: CCCTATTTCTGGGATACATGTGCAGAACGTGCAGCAATTTCTATGGAAGAAGATGGAGTTTCGCTCTTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409818.7
CDS CCA 72 bp AAGCACTGCTTTCTAGAACATTTTCTAGTAGATCAGTaGGAACCTGGAGACATTACCACAGCTTCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: KHCFLEHFLVDQ*EPGDITTASPS
Trigger: GGAAGGAGAAGCTGTGGTAATGTCTCCAGGTTCCCACTGATCTACTAGAAAATGTTCTAGAAAGCAGTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS GCA 72 bp GCTCTCAGCACACTGCAAGACTGTAAACATGCATGTTaGTCCTATCCAGACAAAAGCTTTAGTAGGATACTA +
Preference number: 6 (lower is better)
Translates to: ALSTLQDCKHAC*SYPDKSFSRIL
Trigger: TAGTATCCTACTAAAGCTTTTGTCTGGATAGGAGCAACATGCATGTTTACAGTCTTGCAGTGTGCTGAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000620095.4
CDS TCA 72 bp AGCAGAGGTTTCCAAGTGTTCTACCATCGGATATGCTaGGAGTTACTAAGTGTTCTTGAGATCATTTACAAA +
Preference number: 6 (lower is better)
Translates to: SRGFQVFYHRIC*ELLSVLEIIYK
Trigger: TTTGTAAATGATCTCAAGAACACTTAGTAACTCTCAGCATATCCGATGGTAGAACACTTGGAAACCTCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS TCA 72 bp CTCTTTTTAGTACGAGTAGTGTGTGGCACAGCACTTTaGAAATGGCTGGGATTAAATTCAATAAGTTGTCTT +
Preference number: 6 (lower is better)
Translates to: LFLVRVVCGTAL*KWLGLNSISCL
Trigger: AAGACAACTTATTGAATTTAATCCCAGCCATTTTCAAAGTGCTGTGCCACACACTACTCGTACTAAAAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000315506.11
ENST00000359962.9
ENST00000396886.7
ENST00000409143.5
ENST00000409474.8
ENST00000428900.6
ENST00000447335.6
ENST00000620095.4
CDS TCA 72 bp CTTCCTTTCCATGACTTCTGTACCAAATTTGTCAGTTaGAGCTTATCTATTTCTGCTATCTTGAGAGTGAGA +
Preference number: 6 (lower is better)
Translates to: LPFHDFCTKFVS*SLSISAILRVR
Trigger: TCTCACTCTCAAGATAGCAGAAATAGATAAGCTTCAACTGACAAATTTGGTACAGAAGTCATGGAAAGGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396886.7
ENST00000409143.5
CDS GCA 72 bp CTTCTAACAGCAAAGCAATCAAGAGAAAATGTTACCTaGTTCCACACATTTCTCATCAATCTTCATGTCATC +
Preference number: 6 (lower is better)
Translates to: LLTAKQSRENVT*FHTFLINLHVI
Trigger: GATGACATGAAGATTGATGAGAAATGTGTGGAAGCAGGTAACATTTTCTCTTGATTGCTTTGCTGTTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486212.6
CDS CAA 90 bp TTCTCGTCTCCTTGGTATTTAAGATGCTTAGGGTTTATCGATAAGTaGACATTTGGATTTATAAACCAGTGTGTGTGTGTTCATTCATCT +
Preference number: 6 (lower is better)
Translates to: FSSPWYLRCLGFIDK*TFGFINQCVCVHSS
Trigger: AGATGAATGAACACACACACACTGGTTTATAAATCCAAATGTCAACTTATCGATAAACCCTAAGCATCTTAAATACCAAGGAGACGAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483841.2
CDS TCA 72 bp TGTTCATTCATCTGCTTGTCCCTCTTTATCTCATCTTaGGGTAACAGAAACCCAAGAAAAACATTTTGTTTC +
Preference number: 6 (lower is better)
Translates to: CSFICLSLFISS*GNRNPRKTFCF
Trigger: GAAACAAAATGTTTTTCTTGGGTTTCTGTTACCTCAAGATGAGATAAAGAGGGACAAGCAGATGAATGAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483841.2