RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000161647

Ensembl transcript IDs: ENST00000398389.9, ENST00000398393.5, ENST00000479797.1, ENST00000480958.1, ENST00000486600.1, ENST00000496503.5, ENST00000589375.5

Found 372 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTGTTGGTACCTaGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGCTCCGG +
Preference number: 1 (lower is better)
Translates to: SEPPGGAALRAGVGT*PPLRKSAAPETQLR
Trigger: CCGGAGCTGAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR GCA 90 bp GTCAGCAGCTCCGGAGACTCAGCTCCGGAGGACATCTTTCCTTCCTaGGAGCCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTC +
Preference number: 1 (lower is better)
Translates to: VSSSGDSAPEDIFPS*EPPSLSLQPSRKLL
Trigger: GAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGAGTCTCCGGAGCTGCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR GCA 90 bp CCAAAGTGCTGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTaGAGTCGGGCTCCCAGAGACCCGATCAGAACCACCAGGCGGGGC +
Preference number: 1 (lower is better)
Translates to: PKCCGFSATTFCFSS*SRAPRDPIRTTRRG
Trigger: GCCCCGCCTGGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR GCA 90 bp GGAACAGCGACGCCAAAGTGCTGTGGGTTCTCAGCCACCACCTTTTaGTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACC +
Preference number: 1 (lower is better)
Translates to: GTATPKCCGFSATTF*FSSCSRAPRDPIRT
Trigger: GGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR CCA 90 bp CTTTCGGGGCCTGGTGGTATGTGGAACAGCGACGCCAAAGTGCTGTaGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGC +
Preference number: 1 (lower is better)
Translates to: LSGPGGMWNSDAKVL*VLSHHLLLQLVQSG
Trigger: GCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGTTCCACATACCACCAGGCCCCGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
3UTR TCA 90 bp CCTTCACCAGCACGGCGTCTACCAGGTGCCCGTAATGCCGGTCTATaGAGGCGGCAGAAGCGGCCATCTCTTGCTGCTGCTCATCAAATG +
Preference number: 1 (lower is better)
Translates to: PSPARRLPGARNAGL*RRQKRPSLAAAHQM
Trigger: CATTTGATGAGCAGCAGCAAGAGATGGCCGCTTCTGCCGCCTTCATAGACCGGCATTACGGGCACCTGGTAGACGCCGTGCTGGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
3UTR TCA 90 bp CAGGTACCCAGTGAGTGTCCTTGCTCAGCTTCTCTAAGACCACTTTaGGCTGGCTGTAGGCACCCTGGAGATCCTCCTTCACCAGCACGG +
Preference number: 1 (lower is better)
Translates to: QVPSECPCSASLRPL*AGCRHPGDPPSPAR
Trigger: CCGTGCTGGTGAAGGAGGATCTCCAGGGTGCCTACAGCCAGCTCAAAGTGGTCTTAGAGAAGCTGAGCAAGGACACTCACTGGGTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
3UTR TCA 90 bp GGAATAGAACAAATCAAACAAAGCATGGGCTCGATGTTAGGAATCTaGGGGTATTTAGAAAGGGGAAAGGCAACCTTACATTCCTCGAGT +
Preference number: 1 (lower is better)
Translates to: GIEQIKQSMGSMLGI*GYLERGKATLHSSS
Trigger: ACTCGAGGAATGTAAGGTTGCCTTTCCCCTTTCTAAATACCCTCAGATTCCTAACATCGAGCCCATGCTTTGTTTGATTTGTTCTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR CCA 90 bp GAATCAGTACTGTATAAATTAACCACTACCACCCACAAAAGACAGTaGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGT +
Preference number: 1 (lower is better)
Translates to: ESVLYKLTTTTHKRQ*LLNFGTKNQGQLAC
Trigger: ACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACTGTCTTTTGTGGGTGGTAGTGGTTAATTTATACAGTACTGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR-3UTR CCA 90 bp TTCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGGCCGCTCTCCGGGCTaGTGTTGGTACCTGGCCACC +
Preference number: 2 (lower is better)
Translates to: FLPASHPVSPYSPAGSSSGRSPG*CWYLAT
Trigger: GGTGGCCAGGTACCAACACCAGCCCGGAGAGCGGCC...GGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR CAA 90 bp AGACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTGTaGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTC +
Preference number: 2 (lower is better)
Translates to: RPDQNHQAGPLSGLV*VPGHLFVSQQLRRL
Trigger: GAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR-3UTR CCA 90 bp TCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGTCTCCGGGCTGGTGTTaGTACCTGGCCACCTCTTCG +
Preference number: 2 (lower is better)
Translates to: SFLRATQSLPTAQPEAPPSPGWC*YLATSS
Trigger: CGAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGA...CGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR-3UTR GCA 90 bp ACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCACAGCGACGCCAAAGTaGTGTGGGTTCTCAGCCACC +
Preference number: 2 (lower is better)
Translates to: TFCFSSCSRAPRDPIRTTTATPK*CGFSAT
Trigger: GGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGT...GGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR-3UTR CCA 90 bp TCCGGAGACTCAGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCACCCAGTCTCGCTGGTGTTGGTACCTaGCCACCTCTTCGTAAGTCA +
Preference number: 2 (lower is better)
Translates to: SGDSAPEDIFPSCEPPSLAGVGT*PPLRKS
Trigger: TGACTTACGAAGAGGTGGCCAGGTACCAACACCAGC...GAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGAGTCTCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR-3UTR CCA 90 bp GGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACAAATGGAGATGGGTCTaGGGTTCCCGAGGAGACAGA +
Preference number: 2 (lower is better)
Translates to: GFSATTFCFSSCSRAPRDKWRWV*GSRGDR
Trigger: TCTGTCTCCTCGGGAACCCCAGACCCATCTCCATTT...GTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479797.1
3UTR-3UTR CCA 90 bp GTTGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGCTCCGGACCCTAAAATGGAGATaGGTCTGGGGTTCCCGAGGA +
Preference number: 2 (lower is better)
Translates to: VGTWPPLRKSAAPETQLRTLKWR*VWGSRG
Trigger: TCCTCGGGAACCCCAGACCCATCTCCATTTTAGGGT...CCGGAGCTGAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479797.1
3UTR-3UTR TCA 90 bp TCAGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGGGAGTCTGGACTAGATaGTCTTCAAGGTCCCGTCCA +
Preference number: 2 (lower is better)
Translates to: SAPEDIFPSCEPPSLSLQGVWTR*SSRSRP
Trigger: TGGACGGGACCTTGAAGATCATCTAGTCCAGACTCC...CTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
3UTR-3UTR TCA 90 bp TCTGGGATAAAGTTACCTGACCCAACTAACAGGTACCCAGTGAGTGTCCTTGCTCTCCCTCTCTGCGCTTaGGATTCCTTGATGGTAAAA +
Preference number: 2 (lower is better)
Translates to: SGIKLPDPTNRYPVSVLALPLCA*DSLMVK
Trigger: TTTTACCATCAAGGAATCTCAAGCGCAGAGAGGGAG...AGCAAGGACACTCACTGGGTACCTGTTAGTTGGGTCAGGTAACTTTATCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
3UTR-3UTR TCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTAGGAGTCTGGACTAGATaGTCTTCAAGGTCCCGTCCA +
Preference number: 2 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLGVWTR*SSRSRP
Trigger: TGGACGGGACCTTGAAGATCATCTAGTCCAGACTCC...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR-3UTR TCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCCTCCCTCTCTGCGCTTaGGATTCCTTGATGGTAAAA +
Preference number: 2 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQILPLCA*DSLMVK
Trigger: TTTTACCATCAAGGAATCTCAAGCGCAGAGAGGGAG...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR-3UTR GCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCGTTGATGGTGAAGTGTaGCTCAGCCTTCCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQIVDGEV*LSLPEK
Trigger: TTTCTCTGGAAGGCTGAGGCACACTTCACCATCAAC...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR-3UTR TCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTCTCCCTCTCTGCGCTTaGGATTCCTTGATGGTAAAA +
Preference number: 2 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVLPLCA*DSLMVK
Trigger: TTTTACCATCAAGGAATCTCAAGCGCAGAGAGGGAG...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR-3UTR GCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTGTTGATGGTGAAGTGTaGCTCAGCCTTCCAGAGAAA +
Preference number: 2 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVVDGEV*LSLPEK
Trigger: TTTCTCTGGAAGGCTGAGGCACACTTCACCATCAAC...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR-3UTR TCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTCAACGTTTTAGTGCTTaGAGACAGGGGAACTTCAGT +
Preference number: 2 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVQRFSA*RQGNFS
Trigger: ACTGAAGTTCCCCTGTCTTCAAGCACTAAAACGTTG...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR-3UTR TCA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTTCGATGTTAGGAATCTaGGGGTATTTAGAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICSMLGI*GYLERG
Trigger: TCCCCTTTCTAAATACCCTCAGATTCCTAACATCGA...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR-3UTR CCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTACCCACAAAAGACAGTaGCTACTTAACTTTGGTACA +
Preference number: 2 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVTHKRQ*LLNFGT
Trigger: TGTACCAAAGTTAAGTAGCCACTGTCTTTTGTGGGT...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR CCA 72 bp CCAGGCGGGGCCGCTCTCCGGGCTGGTGTTGGTACCTaGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACT +
Preference number: 3 (lower is better)
Translates to: PGGAALRAGVGT*PPLRKSAAPET
Trigger: AGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGAGCGGCCCCGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR-3UTR CAA 90 bp TCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGCTCTCCGGGCTGGTGTaGGTACCTGGCCACCTCTTC +
Preference number: 3 (lower is better)
Translates to: SFLRATQSLPTAQPEAPPLSGLV*VPGHLF
Trigger: GAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGAG...CGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR TCA 72 bp GCACGGCGTCTACCAGGTGCCCGTAATGCCGGTCTATaGAGGCGGCAGAAGCGGCCATCTCTTGCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: ARRLPGARNAGL*RRQKRPSLAAA
Trigger: AGCAGCAGCAAGAGATGGCCGCTTCTGCCGCCTTCATAGACCGGCATTACGGGCACCTGGTAGACGCCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
3UTR GCA 72 bp ACGCCAAAGTGCTGTGGGTTCTCAGCCACCACCTTTTaGTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCG +
Preference number: 3 (lower is better)
Translates to: TPKCCGFSATTF*FSSCSRAPRDP
Trigger: CGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR-3UTR CAA 90 bp GTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCCTCAGCCACCACCTTTaGCTTCAGCTCGTGCAGTCG +
Preference number: 3 (lower is better)
Translates to: VLSHHLLLQLVQSGSQRPLSHHL*LQLVQS
Trigger: CGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAG...GGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR GCA 72 bp TGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTaGAGTCGGGCTCCCAGAGACCCGATCAGAACCACC +
Preference number: 3 (lower is better)
Translates to: CGFSATTFCFSS*SRAPRDPIRTT
Trigger: GGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR GCA 72 bp CGGGGCCTGGTGGTATGTGGAACAGCGACGCCAAAGTaGTGTGGGTTCTCAGCCACCACCTTTTGCTTCAGC +
Preference number: 3 (lower is better)
Translates to: RGLVVCGTATPK*CGFSATTFCFS
Trigger: GCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGTTCCACATACCACCAGGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
3UTR-3UTR CAA 90 bp CAGCCTGAATGGCCTCCAGGCTGGTTCCATACAGATTTTCCTTATATTCACCATCTCTCCGGGCTGGTGTaGGTACCTGGCCACCTCTTC +
Preference number: 3 (lower is better)
Translates to: QPEWPPGWFHTDFPYIHHLSGLV*VPGHLF
Trigger: GAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGAG...ATGGTGAATATAAGGAAAATCTGTATGGAACCAGCCTGGAGGCCATTCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
3UTR TCA 72 bp AGTGAGTGTCCTTGCTCAGCTTCTCTAAGACCACTTTaGGCTGGCTGTAGGCACCCTGGAGATCCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: SECPCSASLRPL*AGCRHPGDPPS
Trigger: TGAAGGAGGATCTCCAGGGTGCCTACAGCCAGCTCAAAGTGGTCTTAGAGAAGCTGAGCAAGGACACTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
3UTR TCA 72 bp CAAATCAAACAAAGCATGGGCTCGATGTTAGGAATCTaGGGGTATTTAGAAAGGGGAAAGGCAACCTTACAT +
Preference number: 3 (lower is better)
Translates to: QIKQSMGSMLGI*GYLERGKATLH
Trigger: ATGTAAGGTTGCCTTTCCCCTTTCTAAATACCCTCAGATTCCTAACATCGAGCCCATGCTTTGTTTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR CCA 72 bp CTGTATAAATTAACCACTACCACCCACAAAAGACAGTaGCTACTTAACTTTGGTACAAAGAATCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: LYKLTTTTHKRQ*LLNFGTKNQGQ
Trigger: CTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACTGTCTTTTGTGGGTGGTAGTGGTTAATTTATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR TCA 72 bp CTACATACTTTTATTCTTGACAGAAATGGTTTACAGTaGCGTAGCCATAGTTTTGACAGGGAGAGTCATCTG +
Preference number: 3 (lower is better)
Translates to: LHTFILDRNGLQ*RSHSFDRESHL
Trigger: CAGATGACTCTCCCTGTCAAAACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR GCA 72 bp CAGGATAGTACAGTAATTCATGTTGATGGTGAAGTGTaGCTCAGCCTTCCAGAGAAAATTTACGTATATTCA +
Preference number: 3 (lower is better)
Translates to: QDSTVIHVDGEV*LSLPEKIYVYS
Trigger: TGAATATACGTAAATTTTCTCTGGAAGGCTGAGGCACACTTCACCATCAACATGAATTACTGTACTATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR-3UTR CAA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTAGTGGCTACTTAACTTaGGTACAAAGAATCAGGGTC +
Preference number: 3 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVSGYLT*VQRIRV
Trigger: GACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp GGGCTCCCAGAGACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTCCGACTCGCTTGGCCTaGCACCACGTGGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: GLPETRSEPPGGAALRAGPTRLA*HHVGSS
Trigger: GGACGACCCCACGTGGTGGCAGGCCAAGCGAGTCGG...ACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGTCTCTGGGAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp GGGCTCCCAGAGACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTGCTCGTCCCGCCGGATaGTGGCACCCAGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GLPETRSEPPGGAALRAGARPAG*WHPGVP
Trigger: AGGAACCCCTGGGTGCCACCATCCGGCGGGACGAGC...ACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGTCTCTGGGAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp GGGCTCCCAGAGACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTTCGTCGGGCCGCTTGTaGAGGACTGCGATCCCGTTC +
Preference number: 4 (lower is better)
Translates to: GLPETRSEPPGGAALRAGSSGRL*RTAIPF
Trigger: GAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGA...ACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGTCTCTGGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp TCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGCCTCCTGGCAAGGGATaGCCCGGTCCTCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: SFLRATQSLPTAQPEAPPPPGKG*PGPPEG
Trigger: ACCCTCGGGAGGACCGGGCCATCCCTTGCCAGGAGG...CGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp TCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGCAGGCCGCTCCTGTCTaGTGCGCCTCCTCGCATGAT +
Preference number: 4 (lower is better)
Translates to: SFLRATQSLPTAQPEAPPQAAPV*CASSHD
Trigger: ATCATGCGAGGAGGCGCAGCAGACAGGAGCGGCCTG...CGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp GGGCTGGTGTTGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCTCGCGCCGGGATGTGTaGTCCGCGAACGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GLVLVPGHLFVSQQLRRLSRRDV*SANGSR
Trigger: GCGGCTCCCGTTCGCGGAGCACACATCCCGGCGCGA...GAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAACACCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp TTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCAGGCAGGACCTGCCTGCGCTaGAAGGGCAGGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: FASARAVGLPETRSEPPGRTCLR*KGRPAS
Trigger: GGAGGCGGGCCTGCCCTTCCAGCGCAGGCAGGTCCT...GCCTGGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp ACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTGTTGGTACCTGGTCTCCGGGCTGGTGTTaGTACCTGGCCACCTCTTCG +
Preference number: 4 (lower is better)
Translates to: TRSEPPGGAALRAGVGTWSPGWC*YLATSS
Trigger: CGAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGA...CCAGGTACCAACACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
3UTR CAA 72 bp CAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTGTaGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QNHQAGPLSGLV*VPGHLFVSQQL
Trigger: GAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR TCA 90 bp GCTCCCAGAGACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTGTGGAAGAGGGCGCGCATaGACACCTTGCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: APRDPIRTTRRGRSPGWCGRGRA*TPCSPL
Trigger: TAAAGGAGAGCAAGGTGTTCATGCGCGCCCTCTTCC...ACACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGTCTCTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp GCTCCCAGAGACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTGTACTCCTTCCTTCTCATaGCTCTTTCGGGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: APRDPIRTTRRGRSPGWCTPSFS*LFRGLV
Trigger: CACCAGGCCCCGAAAGAGCCATGAGAAGGAAGGAGT...ACACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGTCTCTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp TCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGCACAGCCCTCAGGTaGGGGGTGGACAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SATTFCFSSCSRAPRDPISTALR*GVDSSW
Trigger: CCAGCTGCTGTCCACCCCGCACCTGAGGGCTGTGCT...GATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp GCTCCCAGAGACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTGTCTCATCAAATGGGGCTaGTGTGTCCTCACAAGCTGG +
Preference number: 4 (lower is better)
Translates to: APRDPIRTTRRGRSPGWCLIKWG*CVLTSW
Trigger: CCAGCTTGTGAGGACACAGCAGCCCCATTTGATGAG...ACACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGTCTCTGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp CAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGAAGACCAGCCACATAGTGCCCTCAGGTGCGGGGTaGACAGCAGCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QSLPTAQPEAPPKTSHIVPSGAG*TAAGAA
Trigger: AGCTGCTCCAGCTGCTGTCCACCCCGCACCTGAGGG...CACTATGTGGCTGGTCTTCGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp TCCGGAGACTCAGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCACCCAGTCTCCGTCCCGCCGGATGGTaGCACCCAGGGGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SGDSAPEDIFPSCEPPSLRPAGW*HPGVPC
Trigger: ACAAGGAACCCCTGGGTGCCACCATCCGGCGGGACG...GAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGAGTCTCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp TTTCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCGACTGGGCCAGAATCTaGCTGATCTCGTCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: FPSCEPPSLSLQPSRKLLDWARI*LISSGR
Trigger: GCGGCCCGACGAGATCAGCCAGATTCTGGCCCAGTC...GAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp CCTACAGCCCAGCCGGAAGCTCCTCCGAAGACCAGCCACATAGTGCCCTTTGAGCACGTGGGGTCGTCCTaGCTCACCACCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PTAQPEAPPKTSHIVPFEHVGSS*LTTSRT
Trigger: GGTCCTGGAGGTGGTGAGCCAGGACGACCCCACGTG...CTCAAAGGGCACTATGTGGCTGGTCTTCGGAGGAGCTTCCGGCTGGGCTGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp CTTTCGGGGCCTGGTGGTATGTGGAACAGCGACGCCAAAGTGCTGTGGGTTCTCGGCCGCTCTCCGGGCTaGTGTTGGTACCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: LSGPGGMWNSDAKVLWVLGRSPG*CWYLAT
Trigger: GGTGGCCAGGTACCAACACCAGCCCGGAGAGCGGCC...GAGAACCCACAGCACTTTGGCGTCGCTGTTCCACATACCACCAGGCCCCGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp CGGGCTCCCAGAGACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGGAATGGCCTCCAGGCTaGTTCCATACAGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: RAPRDPIRTTRRGRSPGWEWPPG*FHTDFP
Trigger: AGGAAAATCTGTATGGAACCAGCCTGGAGGCCATTC...CCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGTCTCTGGGAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp AGACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTGTTGGTACCTCAGAATCGCCTCTCCTaGAACCCCTTGGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: RPDQNHQAGPLSGLVLVPQNRLS*NPLEGM
Trigger: CATCCCCTCCAAGGGGTTCCAGGAGAGGCGATTCTG...AGGTACCAACACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479797.1
CDS-3UTR TCA 90 bp TCCGGAGACTCAGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCACCCAGTCTCCTGCGCCTCCTCGCATaGTCCTGGCCACCACAACAG +
Preference number: 4 (lower is better)
Translates to: SGDSAPEDIFPSCEPPSLLRLLA*SWPPQQ
Trigger: CTGTTGTGGTGGCCAGGATCATGCGAGGAGGCGCAG...GAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGAGTCTCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR TCA 90 bp TCCGGAGACTCAGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCACCCAGTCTCGGGCCAGAATCTGGCTaGTCTCGTCGGGCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: SGDSAPEDIFPSCEPPSLGPESG*SRRAAC
Trigger: ACAAGCGGCCCGACGAGATCAGCCAGATTCTGGCCC...GAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGAGTCTCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR TCA 90 bp ACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCACCCCTTGGAGGGGATaGGGCCGGCTCGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: TFCFSSCSRAPRDPIRTTTPWRG*GRLEGW
Trigger: CCAACCTTCGAGCCGGCCTCATCCCCTCCAAGGGGT...GGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR TCA 90 bp CTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCAGACCCCTTGGAGGGGATaGGGCCGGCTCGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLLQLVQSGSQRPDQNHQTPWRG*GRLEGW
Trigger: CCAACCTTCGAGCCGGCCTCATCCCCTCCAAGGGGT...CTGGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR GCA 90 bp GAGACTCAGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCACCCAGTCTCTCCCGCCGCTCCTGTCTGCTaGGCCTCCTCGCATGATCCT +
Preference number: 4 (lower is better)
Translates to: ETQLRRTSFLPASHPVSPAAPVC*ASSHDP
Trigger: AGGATCATGCGAGGAGGCGCAGCAGACAGGAGCGGC...GGGAGAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp GGAACAGCGACGCCAAAGTGCTGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCGCAGATTCCTCGGGCTaGTCCCCGCAGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GTATPKCCGFSATTFCFSADSSG*SPQEAE
Trigger: CTCGGCCTCCTGCGGGGAGCAGCCCGAGGAATCTGC...GCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp GCTGGTGTTGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGGGCCGGCTCGAAGGTTaGTGTCCCCGACTCGCTTGG +
Preference number: 4 (lower is better)
Translates to: AGVGTWPPLRKSAAPETQGRLEG*CPRLAW
Trigger: CCAAGCGAGTCGGGGACACCAACCTTCGAGCCGGCC...CTGAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAACACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp AAAGTGCTGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCGGCCGCTCTCCGGGCTaGTGTTGGTACCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: KVLWVLSHHLLLQLVQSGGRSPG*CWYLAT
Trigger: GGTGGCCAGGTACCAACACCAGCCCGGAGAGCGGCC...GCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR CCA 90 bp CCCAGAGACCCGATCAGAACCACCAGGCGGGGCCGCTCTCCGGGCTGGTGTTGGTGTGTCCTCACAAGCTaGGGACATAGGTGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: PRDPIRTTRRGRSPGWCWCVLTS*GHRWRF
Trigger: AAAACGCCACCTATGTCCCCAGCTTGTGAGGACACA...CCAACACCAGCCCGGAGAGCGGCCCCGCCTGGTGGTTCTGATCGGGTCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp ACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCACAACAGCCCCTGAGTaGTCGTCCCGCCGGATGGTG +
Preference number: 4 (lower is better)
Translates to: TFCFSSCSRAPRDPIRTTTTAPE*SSRRMV
Trigger: CACCATCCGGCGGGACGAGCACTCAGGGGCTGTTGT...GGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp TGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGACTCCCGACCTCTCCCTaGAGATTCCTCGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CGFSATTFCFSSCSRAPRLPTSP*RFLGLL
Trigger: GAGCAGCCCGAGGAATCTGCAGGGAGAGGTCGGGAG...TCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp AGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGGGGGTGGACAGCAGCTaGAGCAGCTCCCTCTCATCA +
Preference number: 4 (lower is better)
Translates to: SHHLLLQLVQSGSQRPDQGVDSS*SSSLSS
Trigger: TGATGAGAGGGAGCTGCTCCAGCTGCTGTCCACCCC...CTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp GTAATGCCGGTCTATGAAGGCGGCAGAAGCGGCCATCTCTTGCTGCTGCTCATCTGGCCTGCCACCACGTaGGGTCGTCCTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: VMPVYEGGRSGHLLLLLIWPATT*GRPGSP
Trigger: TGGTGAGCCAGGACGACCCCACGTGGTGGCAGGCCA...GATGAGCAGCAGCAAGAGATGGCCGCTTCTGCCGCCTTCATAGACCGGCATTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp AGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGTCTCCGGGCTGGTGTTaGTACCTGGCCACCTCTTCG +
Preference number: 4 (lower is better)
Translates to: SHHLLLQLVQSGSQRPDQSPGWC*YLATSS
Trigger: CGAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGA...CTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR GCA 90 bp GCTGGTGTTGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGTCCCTCTCATCACTGTaGACGGAGGCGGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: AGVGTWPPLRKSAAPETQSLSSL*TEAACN
Trigger: GTTGCAGGCCGCCTCCGTGCACAGTGATGAGAGGGA...CTGAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAACACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp CTCCGGAGGACATCTTTCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCACCGCTTGTGCAGGACTaGGATCCCGTTCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: LRRTSFLPASHPVSPYSPPLVQD*DPVHFS
Trigger: CGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGG...TGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp CTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGCTCCGGAGGACATCTTTCCTTCACCACCTCCAGGACCTaGCTGCGCTGGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFVSQQLRRLSSGGHLSFTTSRT*LRWKGR
Trigger: CCTGCCCTTCCAGCGCAGGCAGGTCCTGGAGGTGGT...GAAGGAAAGATGTCCTCCGGAGCTGAGTCTCCGGAGCTGCTGACTTACGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp CGGAGACTCAGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCACCCAGTCTCTCACAGCGACGCCAAAGTaGTGTGGGTTCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RRLSSGGHLSFLRATQSLTATPK*CGFSAT
Trigger: GGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGT...GAGAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGAGTCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR CCA 90 bp GGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCAGGGTGATGGATCCCTaGGACTGGGCCAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: GSQPPPFASARAVGLPETRVMDP*DWARIW
Trigger: CCAGATTCTGGCCCAGTCCCAGGGATCCATCACCCT...GGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp TCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGAAGACCAGCCACATAGTGCCCCTTAGTCGTCTCTCCTaGAACCCCTTGGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: SLPTAQPEAPPKTSHIVPLSRLS*NPLEGM
Trigger: CATCCCCTCCAAGGGGTTCCAGGAGAGACGACTAAG...GGGCACTATGTGGCTGGTCTTCGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR TCA 90 bp GTTGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGCTCCGGTTGGCCATAACAGCCTaGATGGCCTCCAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VGTWPPLRKSAAPETQLRLAITA*MASRLV
Trigger: AACCAGCCTGGAGGCCATTCAGGCTGTTATGGCCAA...CCGGAGCTGAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR TCA 90 bp TCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGAAGACCAGCCACATAGTGCCCCTAACAGGTACCCAGTaGGTGTCCTTGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLPTAQPEAPPKTSHIVPLTGTQ*VSLLSF
Trigger: GAAGCTGAGCAAGGACACTCACTGGGTACCTGTTAG...GGGCACTATGTGGCTGGTCTTCGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp GGAACAGCGACGCCAAAGTGCTGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCCCGATAGCACTGGCATaGTGGCGTTGTCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: GTATPKCCGFSATTFCFSPIALA*WRCHLP
Trigger: CGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGG...GCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp AGTCAGCAGCTCCGGAGACTCAGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCTTTTGCTTCAGCTCGTaGAGTCGGGCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SQQLRRLSSGGHLSFLRAFCFSS*SRAPRD
Trigger: GTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAA...GGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGAGTCTCCGGAGCTGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR GCA 90 bp GTTGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGCTCCGGTCAGCCACCACCTTTTaGTTCAGCTCGTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: VGTWPPLRKSAAPETQLRSATTF*FSSCSR
Trigger: CCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGA...CCGGAGCTGAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR GCA 90 bp GGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACTCAGCCACCACCTTTTaGTTCAGCTCGTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: GFSATTFCFSSCSRAPRDSATTF*FSSCSR
Trigger: CCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGA...GTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR CCA 90 bp CTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCAGAGCTCATCTCCAACGTaGACCAGGCCGCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLLQLVQSGSQRPDQNHQSSSPT*TRPLLS
Trigger: AGACAGGAGCGGCCTGGTCCACGTTGGAGATGAGCT...CTGGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp GCTGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAATGGATCCCTGGGACTaGGCCAGAATCTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: AVGSQPPPFASARAVGLPMDPWD*ARIWLI
Trigger: GATCAGCCAGATTCTGGCCCAGTCCCAGGGATCCAT...TGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp CCGGAGGACATCTTTCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCAGCCTGCTGCTCATCAAATaGGGCTGCTGTGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: PEDIFPSCEPPSLSLQPSLLLIK*GCCVLT
Trigger: TGTGAGGACACAGCAGCCCCATTTGATGAGCAGCAG...GCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp CACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGAAGACCAGCCACATAAATGGAGATGGGTCTaGGGTTCCCGAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: HPVSPYSPAGSSSEDQPHKWRWV*GSRGDR
Trigger: TCTGTCTCCTCGGGAACCCCAGACCCATCTCCATTT...ATGTGGCTGGTCTTCGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479797.1
CDS-3UTR TCA 90 bp TTCCACTCCTTCCTTCTCATGGCTCTTTCGGGGCCTGGTGGTATGTGGAACAGCCGTAATGCCGGTCTATaGAGGCGGCAGAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: FHSFLLMALSGPGGMWNSRNAGL*RRQKRP
Trigger: TGGCCGCTTCTGCCGCCTTCATAGACCGGCATTACG...GCTGTTCCACATACCACCAGGCCCCGAAAGAGCCATGAGAAGGAAGGAGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR TCA 90 bp GTTGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGCTCCGGTCTCTAAGACCACTTTaGGCTGGCTGTAGGCACCCT +
Preference number: 4 (lower is better)
Translates to: VGTWPPLRKSAAPETQLRSLRPL*AGCRHP
Trigger: AGGGTGCCTACAGCCAGCTCAAAGTGGTCTTAGAGA...CCGGAGCTGAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp TTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCAGGCGCTGGTGTTGGTACCTaGCCACCTCTTCGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: FASARAVGLPETRSEPPGAGVGT*PPLRKS
Trigger: TGACTTACGAAGAGGTGGCCAGGTACCAACACCAGC...GCCTGGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR CCA 90 bp CGCCAAAGTGCTGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCCTGGTGGTATGTaGAACAGCGACGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: RQSAVGSQPPPFASARAVGPGGM*NSDAKV
Trigger: CACTTTGGCGTCGCTGTTCCACATACCACCAGGCCC...GACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp GGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCACCCTAAAATGGAGATaGGTCTGGGGTTCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: GSQPPPFASARAVGLPETTLKWR*VWGSRG
Trigger: TCCTCGGGAACCCCAGACCCATCTCCATTTTAGGGT...GGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479797.1
3UTR CAA 72 bp ATGCCGGTCTATGAAGGCGGCAGAAGCGGCCATCTCTaGCTGCTGCTCATCAAATGGGGCTGCTGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: MPVYEGGRSGHL*LLLIKWGCCVL
Trigger: GAGGACACAGCAGCCCCATTTGATGAGCAGCAGCAAGAGATGGCCGCTTCTGCCGCCTTCATAGACCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR TCA 90 bp CTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCAGGGAGTCTGGACTAGATaGTCTTCAAGGTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLLQLVQSGSQRPDQNHQGVWTR*SSRSRP
Trigger: TGGACGGGACCTTGAAGATCATCTAGTCCAGACTCC...CTGGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGCCGACTCGCTTGGCCTaGCACCACGTGGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQPTRLA*HHVGSS
Trigger: GGACGACCCCACGTGGTGGCAGGCCAAGCGAGTCGG...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp ACAGCGACGCCAAAGTGCTGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTTTTGCTTCAGCTCGTaGAGTCGGGCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: TATPKCCGFSATTFCFSSFCFSS*SRAPRD
Trigger: GTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAA...CGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR GCA 90 bp TGGTGGTATGTGGAACAGCGACGCCAAAGTGCTGTGGGTTCTCAGCCACCACCTGCGGCCATCTCTTGCTaGTGCTCATCAAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: WWYVEQRRQSAVGSQPPPAAISC*CSSNGA
Trigger: AGCCCCATTTGATGAGCAGCAGCAAGAGATGGCCGC...AGGTGGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGTTCCACATACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp TTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCAGGCCCCAGTGAGTGTCCTTaGTCAGCTTCTCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: FASARAVGLPETRSEPPGPSECP*SASLRP
Trigger: TGGTCTTAGAGAAGCTGAGCAAGGACACTCACTGGG...GCCTGGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp GGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGCTCCGGAGGACATCTTAGCGCTGTGCAGAACTaGGGTTGGACTTTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GHLFVSQQLRRLSSGGHLSAVQN*GWTLPF
Trigger: GAAAGGCAAAGTCCAACCCCAGTTCTGCACAGCGCT...AAGATGTCCTCCGGAGCTGAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGCCTCCTGGCAAGGGATaGCCCGGTCCTCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQPPGKG*PGPPEG
Trigger: ACCCTCGGGAGGACCGGGCCATCCCTTGCCAGGAGG...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp ACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCGCTGGTGTTGGTACCTaGCCACCTCTTCGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: TFCFSSCSRAPRDPIRTTAGVGT*PPLRKS
Trigger: TGACTTACGAAGAGGTGGCCAGGTACCAACACCAGC...GGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR CCA 90 bp TTCCACTCCTTCCTTCTCATGGCTCTTTCGGGGCCTGGTGGTATGTGGAACAGCGGCTCTTTCGGGGCCTaGTGGTATGTGGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: FHSFLLMALSGPGGMWNSGSFGA*WYVEQR
Trigger: TCGCTGTTCCACATACCACCAGGCCCCGAAAGAGCC...GCTGTTCCACATACCACCAGGCCCCGAAAGAGCCATGAGAAGGAAGGAGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGAGCACAGCCCTCAGGTaGGGGGTGGACAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQSTALR*GVDSSW
Trigger: CCAGCTGCTGTCCACCCCGCACCTGAGGGCTGTGCT...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp AGTCAGCAGCTCCGGAGACTCAGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCGGGTCAAAATTCTTCTaGGCAACCGTGTCATGTACC +
Preference number: 4 (lower is better)
Translates to: SQQLRRLSSGGHLSFLRAGSKFF*ATVSCT
Trigger: GGTACATGACACGGTTGCCCAGAAGAATTTTGACCC...GGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGAGTCTCCGGAGCTGCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCGGCAGGCCCGCCTCCTaGCAAGGGATGGCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQIGRPAS*QGMARS
Trigger: GGACCGGGCCATCCCTTGCCAGGAGGCGGGCCTGCC...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGTGTCCCCGACTCGCTTaGCCTGCCACCACGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQCPRLA*PATTWG
Trigger: ACCCCACGTGGTGGCAGGCCAAGCGAGTCGGGGACA...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGGGGCCAGAATCTGGCTaGTCTCGTCGGGCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQGPESG*SRRAAC
Trigger: ACAAGCGGCCCGACGAGATCAGCCAGATTCTGGCCC...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp TTTCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCTGCTTAGACACAAAGTaGTATTCCACTCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FPSCEPPSLSLQPSRKLLCLDTK*YSTPSF
Trigger: GAAGGAAGGAGTGGAATATCACTTTGTGTCTAAGCA...GAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR TCA 90 bp AGTCAGCAGCTCCGGAGACTCAGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCTCCAGGAACTTGTTGTaGTGTAAGTCGGCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: SQQLRRLSSGGHLSFLRASRNLL*CKSASN
Trigger: ATTTGAGGCCGACTTACATCACAACAAGTTCCTGGA...GGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCTGAGTCTCCGGAGCTGCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGTGCACGGAGGCGGCCTaGAACTCCTCCATCACGTCC +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQCTEAA*NSSITS
Trigger: GGACGTGATGGAGGAGTTGCAGGCCGCCTCCGTGCA...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGACAACAGCCCCTGAGTaGTCGTCCCGCCGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQTTAPE*SSRRMV
Trigger: CACCATCCGGCGGGACGAGCACTCAGGGGCTGTTGT...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGGCCGCTCCTGTCTGCTaGGCCTCCTCGCATGATCCT +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQAAPVC*ASSHDP
Trigger: AGGATCATGCGAGGAGGCGCAGCAGACAGGAGCGGC...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTCGCGCCGGGATGTGTaGTCCGCGAACGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILSRRDV*SANGSR
Trigger: GCGGCTCCCGTTCGCGGAGCACACATCCCGGCGCGA...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398389.9
CDS-3UTR GCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTCCGACTCGCTTGGCCTaGCACCACGTGGGGTCGTCC +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILPTRLA*HHVGSS
Trigger: GGACGACCCCACGTGGTGGCAGGCCAAGCGAGTCGG...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp TCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGTGTTGTTTTCTGATATaGCCCTTTCAAATCATGATC +
Preference number: 4 (lower is better)
Translates to: SFLRATQSLPTAQPEAPPCCFLI*PFQIMI
Trigger: GATCATGATTTGAAAGGGGCATATCAGAAAACAACA...CGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCGGCCGCTCTCCGGGCTaGTGTTGGTACCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQIGRSPG*CWYLAT
Trigger: GGTGGCCAGGTACCAACACCAGCCCGGAGAGCGGCC...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp CTGAATGGCCTCCAGGCTGGTTCCATACAGATTTTCCTTATATTCACCATGTTCTGCACGGAGGCGGCCTaGAACTCCTCCATCACGTCC +
Preference number: 4 (lower is better)
Translates to: LNGLQAGSIQIFLIFTMFCTEAA*NSSITS
Trigger: GGACGTGATGGAGGAGTTGCAGGCCGCCTCCGTGCA...GAACATGGTGAATATAAGGAAAATCTGTATGGAACCAGCCTGGAGGCCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGCCGCTTGTGCAGGACTaGGATCCCGTTCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQPLVQD*DPVHFS
Trigger: CGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGG...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTACCACCTCCAGGACCTaGCTGCGCTGGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILTTSRT*LRWKGR
Trigger: CCTGCCCTTCCAGCGCAGGCAGGTCCTGGAGGTGGT...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCACCACCTCCAGGACCTaGCTGCGCTGGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQITTSRT*LRWKGR
Trigger: CCTGCCCTTCCAGCGCAGGCAGGTCCTGGAGGTGGT...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp GCTGGTGTTGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGGTGCAGAACTGGGGTTaGACTTTGCCTTTCATAATA +
Preference number: 4 (lower is better)
Translates to: AGVGTWPPLRKSAAPETQVQNWG*TLPFII
Trigger: TATTATGAAAGGCAAAGTCCAACCCCAGTTCTGCAC...CTGAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAACACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACGGCAGGCCCGCCTCCTaGCAAGGGATGGCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYGRPAS*QGMARS
Trigger: GGACCGGGCCATCCCTTGCCAGGAGGCGGGCCTGCC...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGCAGGCCCGCCTCCTaGCAAGGGATGGCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICGRPAS*QGMARS
Trigger: GGACCGGGCCATCCCTTGCCAGGAGGCGGGCCTGCC...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCAGGACCTGCCTGCGCTaGAAGGGCAGGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFRTCLR*KGRPAS
Trigger: GGAGGCGGGCCTGCCCTTCCAGCGCAGGCAGGTCCT...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTCACGTGGGGTCGTCCTaGCTCACCACCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILHVGSS*LTTSRT
Trigger: GGTCCTGGAGGTGGTGAGCCAGGACGACCCCACGTG...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTCTGCGCCTCCTCGCATaGTCCTGGCCACCACAACAG +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILLRLLA*SWPPQQ
Trigger: CTGTTGTGGTGGCCAGGATCATGCGAGGAGGCGCAG...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGCATTCCTCGAGTCCCTaGAGGCACCACTGCAGTACA +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQHSSSP*RHHCST
Trigger: TGTACTGCAGTGGTGCCTTCAGGGACTCGAGGAATG...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTGCACGGAGGCGGCCTaGAACTCCTCCATCACGTCC +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILCTEAA*NSSITS
Trigger: GGACGTGATGGAGGAGTTGCAGGCCGCCTCCGTGCA...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCCAGGCCGCTCCTGTCTaGTGCGCCTCCTCGCATGAT +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQIQAAPV*CASSHD
Trigger: ATCATGCGAGGAGGCGCAGCAGACAGGAGCGGCCTG...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTCGTCGGGCCGCTTGTaGAGGACTGCGATCCCGTTC +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILSSGRL*RTAIPF
Trigger: GAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGA...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGTCAGCCACCACCTTTTaGTTCAGCTCGTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQSATTF*FSSCSR
Trigger: CCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGA...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCGCAGATTCCTCGGGCTaGTCCCCGCAGGAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFADSSG*SPQEAE
Trigger: CTCGGCCTCCTGCGGGGAGCAGCCCGAGGAATCTGC...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000496503.5
CDS-3UTR GCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCCTCCCGACCTCTCCCTaGAGATTCCTCGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQILPTSP*RFLGLL
Trigger: GAGCAGCCCGAGGAATCTGCAGGGAGAGGTCGGGAG...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398389.9
CDS-3UTR CCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTACGTCCCGCCGGATGGTaGCACCCAGGGGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLRPAGW*HPGVPC
Trigger: ACAAGGAACCCCTGGGTGCCACCATCCGGCGGGACG...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGCTCGTCCCGCCGGATaGTGGCACCCAGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGARPAG*WHPGVP
Trigger: AGGAACCCCTGGGTGCCACCATCCGGCGGGACGAGC...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTGACTGGGCCAGAATCTaGCTGATCTCGTCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILDWARI*LISSGR
Trigger: GCGGCCCGACGAGATCAGCCAGATTCTGGCCCAGTC...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGATGGATCCCTGGGACTaGGCCAGAATCTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQMDPWD*ARIWLI
Trigger: GATCAGCCAGATTCTGGCCCAGTCCCAGGGATCCAT...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGACCTCCTGGCAAGGGATaGCCCGGTCCTCCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGPPGKG*PGPPEG
Trigger: ACCCTCGGGAGGACCGGGCCATCCCTTGCCAGGAGG...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACAGGACCTGCCTGCGCTaGAAGGGCAGGCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYRTCLR*KGRPAS
Trigger: GGAGGCGGGCCTGCCCTTCCAGCGCAGGCAGGTCCT...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAACACCACAACAGCCCCTaGGTGCTCGTCCCGCCGGAT +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGEHHNSP*VLVPPD
Trigger: ATCCGGCGGGACGAGCACTCAGGGGCTGTTGTGGTG...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCACCACAACAGCCCCTaGGTGCTCGTCCCGCCGGAT +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFHHNSP*VLVPPD
Trigger: ATCCGGCGGGACGAGCACTCAGGGGCTGTTGTGGTG...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCACCCCTTGGAGGGGATaGGGCCGGCTCGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFTPWRG*GRLEGW
Trigger: CCAACCTTCGAGCCGGCCTCATCCCCTCCAAGGGGT...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCACCCCTTGGAGGGGATaGGGCCGGCTCGAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFTPWRG*GRLEGW
Trigger: CCAACCTTCGAGCCGGCCTCATCCCCTCCAAGGGGT...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCCTCCCGACCTCTCCCTaGAGATTCTGGGAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQILPTSP*RFWEKG
Trigger: CCCCTTCTCCCAGAATCTGCAGGGAGAGGTCGGGAG...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS-3UTR GCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGAGGGCCAGGGTTTCATaGAAACCAGAGTCCTCCGAT +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQRARVS*KPESSD
Trigger: ATCGGAGGACTCTGGTTTGCATGAAACCCTGGCCCT...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCAGCACAGCCCTCAGGTaGGGGGTGGACAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFSTALR*GVDSSW
Trigger: CCAGCTGCTGTCCACCCCGCACCTGAGGGCTGTGCT...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTATCGTCGGGCCGCTTGTaGAGGACTGCGATCCCGTTC +
Preference number: 4 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLSSGRL*RTAIPF
Trigger: GAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGA...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp CCTCCAGGCTGGTTCCATACAGATTTTCCTTATATTCACCATGTTCCAGGAACTATAGCACTGGCATGCTaGCGTTGTCACCTCCCGACC +
Preference number: 4 (lower is better)
Translates to: PPGWFHTDFPYIHHVPGTIALAC*RCHLPT
Trigger: GGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTAT...AGTTCCTGGAACATGGTGAATATAAGGAAAATCTGTATGGAACCAGCCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCCCCTCAGGTGCGGGGTaGACAGCAGCTGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFPSGAG*TAAGAA
Trigger: AGCTGCTCCAGCTGCTGTCCACCCCGCACCTGAGGG...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACGCTCGTCCCGCCGGATaGTGGCACCCAGGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYARPAG*WHPGVP
Trigger: AGGAACCCCTGGGTGCCACCATCCGGCGGGACGAGC...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGACACGTGGGGTCGTCCTaGCTCACCACCTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGHVGSS*LTTSRT
Trigger: GGTCCTGGAGGTGGTGAGCCAGGACGACCCCACGTG...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCTGTCCCCGACTCGCTTaGCCTGCCACCACGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFCPRLA*PATTWG
Trigger: ACCCCACGTGGTGGCAGGCCAAGCGAGTCGGGGACA...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCGGTTGGAGTCAGGTCTaGGCTGGGAGGTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFGWSQV*AGRSAG
Trigger: CCCTGCTGACCTCCCAGCTCAGACCTGACTCCAACC...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAAGGGCCAGAATCTGGCTaGTCTCGTCGGGCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGEGPESG*SRRAAC
Trigger: ACAAGCGGCCCGACGAGATCAGCCAGATTCTGGCCC...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTACGTAATGCCGGTCTATaGAGGCGGCAGAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLRNAGL*RRQKRP
Trigger: TGGCCGCTTCTGCCGCCTTCATAGACCGGCATTACG...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAACAGGCCGCTCCTGTCTaGTGCGCCTCCTCGCATGAT +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGEQAAPV*CASSHD
Trigger: ATCATGCGAGGAGGCGCAGCAGACAGGAGCGGCCTG...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCACAGCGACGCCAAAGTaGTGTGGGTTCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQITATPK*CGFSAT
Trigger: GGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGT...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCATAGCACTGGCATGCTaGCGTTGTCACCTCCCGACC +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQIIALAC*RCHLPT
Trigger: GGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTAT...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTCGTCCCGCCGGATGGTaGCACCCAGGGGTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICRPAGW*HPGVPC
Trigger: ACAAGGAACCCCTGGGTGCCACCATCCGGCGGGACG...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCAGCTCATCTCCAACGTaGACCAGGCCGCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQISSSPT*TRPLLS
Trigger: AGACAGGAGCGGCCTGGTCCACGTTGGAGATGAGCT...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCGACTGGGCCAGAATCTaGCTGATCTCGTCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFDWARI*LISSGR
Trigger: GCGGCCCGACGAGATCAGCCAGATTCTGGCCCAGTC...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACTGGCCTGCCACCACGTaGGGTCGTCCTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYWPATT*GRPGSP
Trigger: TGGTGAGCCAGGACGACCCCACGTGGTGGCAGGCCA...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACTGTCCCCGACTCGCTTaGCCTGCCACCACGTGGGGT +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYCPRLA*PATTWG
Trigger: ACCCCACGTGGTGGCAGGCCAAGCGAGTCGGGGACA...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGCCGGCTCGAAGGTTaGTGTCCCCGACTCGCTTGG +
Preference number: 4 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICGRLEG*CPRLAW
Trigger: CCAAGCGAGTCGGGGACACCAACCTTCGAGCCGGCC...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACGGCCGGCTCGAAGGTTaGTGTCCCCGACTCGCTTGG +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYGRLEG*CPRLAW
Trigger: CCAAGCGAGTCGGGGACACCAACCTTCGAGCCGGCC...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTATCTCCGGGCTGGTGTTaGTACCTGGCCACCTCTTCG +
Preference number: 4 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLSPGWC*YLATSS
Trigger: CGAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGA...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTGGGCCTGGTGGTATGTaGAACAGCGACGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILGPGGM*NSDAKV
Trigger: CACTTTGGCGTCGCTGTTCCACATACCACCAGGCCC...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTGGCTCTTTCGGGGCCTaGTGGTATGTGGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILGSFGA*WYVEQR
Trigger: TCGCTGTTCCACATACCACCAGGCCCCGAAAGAGCC...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGACCGTGTCATGTACCATaGGCACAGCCCTCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGPCHVP*AQPSGA
Trigger: CGCACCTGAGGGCTGTGCTCATGGTACATGACACGG...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACCTGCGCCTCCTCGCATaGTCCTGGCCACCACAACAG +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYLRLLA*SWPPQQ
Trigger: CTGTTGTGGTGGCCAGGATCATGCGAGGAGGCGCAG...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATCCCTCTCATCACTGTaGACGGAGGCGGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGESLSSL*TEAACN
Trigger: GTTGCAGGCCGCCTCCGTGCACAGTGATGAGAGGGA...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCCCCATCTCCTCCTTGTaGTTGGAGTCAGGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQIPISSL*LESGLS
Trigger: GCTCAGACCTGACTCCAACCACAAGGAGGAGATGGG...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAAGGGGTGGACAGCAGCTaGAGCAGCTCCCTCTCATCA +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGEGVDSS*SSSLSS
Trigger: TGATGAGAGGGAGCTGCTCCAGCTGCTGTCCACCCC...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTTGGCCTGCCACCACGTaGGGTCGTCCTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVWPATT*GRPGSP
Trigger: TGGTGAGCCAGGACGACCCCACGTGGTGGCAGGCCA...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTCTTAGTCGTCTCTCCTaGAACCCCTTGGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILLSRLS*NPLEGM
Trigger: CATCCCCTCCAAGGGGTTCCAGGAGAGACGACTAAG...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATCTCCGGGCTGGTGTTaGTACCTGGCCACCTCTTCG +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGESPGWC*YLATSS
Trigger: CGAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGA...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCACCCCTATGATCTCATaGCAGGGACTGGCTAGGACC +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQITPMIS*QGLART
Trigger: GGTCCTAGCCAGTCCCTGCCATGAGATCATAGGGGT...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTGGTTGGAGTCAGGTCTaGGCTGGGAGGTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVGWSQV*AGRSAG
Trigger: CCCTGCTGACCTCCCAGCTCAGACCTGACTCCAACC...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACCCGTGTCATGTACCATaGGCACAGCCCTCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYPCHVP*AQPSGA
Trigger: CGCACCTGAGGGCTGTGCTCATGGTACATGACACGG...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACCGTAATGCCGGTCTATaGAGGCGGCAGAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYRNAGL*RRQKRP
Trigger: TGGCCGCTTCTGCCGCCTTCATAGACCGGCATTACG...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCCTAACAGGTACCCAGTaGGTGTCCTTGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQILTGTQ*VSLLSF
Trigger: GAAGCTGAGCAAGGACACTCACTGGGTACCTGTTAG...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTCCGATAGCACTGGCATaGTGGCGTTGTCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICPIALA*WRCHLP
Trigger: CGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGG...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACCCGATAGCACTGGCATaGTGGCGTTGTCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYPIALA*WRCHLP
Trigger: CGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGG...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTTCCCTCTCATCACTGTaGACGGAGGCGGCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICSLSSL*TEAACN
Trigger: GTTGCAGGCCGCCTCCGTGCACAGTGATGAGAGGGA...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCCCGCTTGTGCAGGACTaGGATCCCGTTCACTTCTCG +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFPLVQD*DPVHFS
Trigger: CGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGG...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAACAGCGACGCCAAAGTaGTGTGGGTTCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGTATPK*CGFSAT
Trigger: GGTGGCTGAGAACCCACAGCACTTTGGCGTCGCTGT...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTAGCGGCCATCTCTTGCTaGTGCTCATCAAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLAAISC*CSSNGA
Trigger: AGCCCCATTTGATGAGCAGCAGCAAGAGATGGCCGC...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTATCTGGGAGAAGGGGGTaGAGGTGGGTATTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLSGRRG*RWVLKL
Trigger: GAGCTTCAATACCCACCTCCACCCCCTTCTCCCAGA...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS-3UTR CCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCATAGCACTGGCATGCTaGCGTTGTCACCTCCCGACC +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFIALAC*RCHLPT
Trigger: GGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTAT...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACGGGGTGGACAGCAGCTaGAGCAGCTCCCTCTCATCA +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYGVDSS*SSSLSS
Trigger: TGATGAGAGGGAGCTGCTCCAGCTGCTGTCCACCCC...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCAGCTCATCTCCAACGTaGACCAGGCCGCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFSSSPT*TRPLLS
Trigger: AGACAGGAGCGGCCTGGTCCACGTTGGAGATGAGCT...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCGGCTCTTTCGGGGCCTaGTGGTATGTGGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFGSFGA*WYVEQR
Trigger: TCGCTGTTCCACATACCACCAGGCCCCGAAAGAGCC...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTCCGTGTCATGTACCATaGGCACAGCCCTCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVPCHVP*AQPSGA
Trigger: CGCACCTGAGGGCTGTGCTCATGGTACATGACACGG...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGGAAGAGGGCGCGCATaGACACCTTGCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGGRGRA*TPCSPL
Trigger: TAAAGGAGAGCAAGGTGTTCATGCGCGCCCTCTTCC...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGTGCTTAGACACAAAGTaGTATTCCACTCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQCLDTK*YSTPSF
Trigger: GAAGGAAGGAGTGGAATATCACTTTGTGTCTAAGCA...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTATCTCTAAGACCACTTTaGGCTGGCTGTAGGCACCCT +
Preference number: 4 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLSLRPL*AGCRHP
Trigger: AGGGTGCCTACAGCCAGCTCAAAGTGGTCTTAGAGA...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCTTTTGCTTCAGCTCGTaGAGTCGGGCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFFCFSS*SRAPRD
Trigger: GTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAA...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATCAGCCACCACCTTTTaGTTCAGCTCGTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGESATTF*FSSCSR
Trigger: CCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGA...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTACTCATCAAATGGGGCTaGTGTGTCCTCACAAGCTGG +
Preference number: 4 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLLIKWG*CVLTSW
Trigger: CCAGCTTGTGAGGACACAGCAGCCCCATTTGATGAG...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAAGCGGCCATCTCTTGCTaGTGCTCATCAAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGEAAISC*CSSNGA
Trigger: AGCCCCATTTGATGAGCAGCAGCAAGAGATGGCCGC...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCCATCTCCTCCTTGTaGTTGGAGTCAGGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFPISSL*LESGLS
Trigger: GCTCAGACCTGACTCCAACCACAAGGAGGAGATGGG...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTAGGGTGATGGATCCCTaGGACTGGGCCAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICRVMDP*DWARIW
Trigger: CCAGATTCTGGCCCAGTCCCAGGGATCCATCACCCT...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACGGGCCTGGTGGTATGTaGAACAGCGACGCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYGPGGM*NSDAKV
Trigger: CACTTTGGCGTCGCTGTTCCACATACCACCAGGCCC...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAAACTCCTTCCTTCTCATaGCTCTTTCGGGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGETPSFS*LFRGLV
Trigger: CACCAGGCCCCGAAAGAGCCATGAGAAGGAAGGAGT...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCACTCCTTCCTTCTCATaGCTCTTTCGGGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFTPSFS*LFRGLV
Trigger: CACCAGGCCCCGAAAGAGCCATGAGAAGGAAGGAGT...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTGTGTCCTCACAAGCTaGGGACATAGGTGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILCVLTS*GHRWRF
Trigger: AAAACGCCACCTATGTCCCCAGCTTGTGAGGACACA...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTACTGCTGCTCATCAAATaGGGCTGCTGTGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLLLLIK*GCCVLT
Trigger: TGTGAGGACACAGCAGCCCCATTTGATGAGCAGCAG...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCACCCCTATGATCTCATaGCAGGGACTGGCTAGGACC +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFTPMIS*QGLART
Trigger: GGTCCTAGCCAGTCCCTGCCATGAGATCATAGGGGT...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
3UTR CAA 72 bp CCACTACCACCCACAAAAGACAGTGGCTACTTAACTTaGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATA +
Preference number: 4 (lower is better)
Translates to: PLPPTKDSGYLT*VQRIRVSLPVI
Trigger: TATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACTGTCTTTTGTGGGTGGTAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTTTGGCCATAACAGCCTaGATGGCCTCCAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICLAITA*MASRLV
Trigger: AACCAGCCTGGAGGCCATTCAGGCTGTTATGGCCAA...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATCTCTAAGACCACTTTaGGCTGGCTGTAGGCACCCT +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGESLRPL*AGCRHP
Trigger: AGGGTGCCTACAGCCAGCTCAAAGTGGTCTTAGAGA...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGGAGTCTGGACTAGATaGTCTTCAAGGTCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGGVWTR*SSRSRP
Trigger: TGGACGGGACCTTGAAGATCATCTAGTCCAGACTCC...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CTCCAGGCTGGTTCCATACAGATTTTCCTTATATTCACCATGTTCCAGGAACTTCTCCCTCTCTGCGCTTaGGATTCCTTGATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LQAGSIQIFLIFTMFQELLPLCA*DSLMVK
Trigger: TTTTACCATCAAGGAATCTCAAGCGCAGAGAGGGAG...AAGTTCCTGGAACATGGTGAATATAAGGAAAATCTGTATGGAACCAGCCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR GCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACTTTTGCTTCAGCTCGTaGAGTCGGGCTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYFCFSS*SRAPRD
Trigger: GTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAA...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAAGCGCTGTGCAGAACTaGGGTTGGACTTTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGSAVQN*GWTLPF
Trigger: GAAAGGCAAAGTCCAACCCCAGTTCTGCACAGCGCT...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACATGGATCCCTGGGACTaGGCCAGAATCTGGCTGATC +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYMDPWD*ARIWLI
Trigger: GATCAGCCAGATTCTGGCCCAGTCCCAGGGATCCAT...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTAGGGTGATGGATCCCTaGGACTGGGCCAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVRVMDP*DWARIW
Trigger: CCAGATTCTGGCCCAGTCCCAGGGATCCATCACCCT...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACCTTAGTCGTCTCTCCTaGAACCCCTTGGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYLSRLS*NPLEGM
Trigger: CATCCCCTCCAAGGGGTTCCAGGAGAGACGACTAAG...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAAGCTGGTGTTGGTACCTaGCCACCTCTTCGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGEAGVGT*PPLRKS
Trigger: TGACTTACGAAGAGGTGGCCAGGTACCAACACCAGC...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCGCTGGTGTTGGTACCTaGCCACCTCTTCGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFAGVGT*PPLRKS
Trigger: TGACTTACGAAGAGGTGGCCAGGTACCAACACCAGC...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTGGAAGAGGGCGCGCATaGACACCTTGCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVGRGRA*TPCSPL
Trigger: TAAAGGAGAGCAAGGTGTTCATGCGCGCCCTCTTCC...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCTCCAGGAACTTGTTGTaGTGTAAGTCGGCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQISRNLL*CKSASN
Trigger: ATTTGAGGCCGACTTACATCACAACAAGTTCCTGGA...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTCATTCCTCGAGTCCCTaGAGGCACCACTGCAGTACA +
Preference number: 4 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVHSSSP*RHHCST
Trigger: TGTACTGCAGTGGTGCCTTCAGGGACTCGAGGAATG...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGACCCAGTGAGTGTCCTTaGTCAGCTTCTCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGPSECP*SASLRP
Trigger: TGGTCTTAGAGAAGCTGAGCAAGGACACTCACTGGG...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCCCCAGTGAGTGTCCTTaGTCAGCTTCTCTAAGACCA +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFPSECP*SASLRP
Trigger: TGGTCTTAGAGAAGCTGAGCAAGGACACTCACTGGG...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCAGAAGGGGGTGGAGGTaGGTATTGAAGCTCCATCAA +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFRRGWR*VLKLHQ
Trigger: TTGATGGAGCTTCAATACCCACCTCCACCCCCTTCT...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS-3UTR TCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCAAAGCTAAGATGTGCTaGGTGTCCTCGATGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFKAKMC*VSSMCQ
Trigger: TTGGCACATCGAGGACACTCAGCACATCTTAGCTTT...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS-3UTR TCA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTATCCAGGAACTTGTTGTaGTGTAAGTCGGCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLSRNLL*CKSASN
Trigger: ATTTGAGGCCGACTTACATCACAACAAGTTCCTGGA...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTCTAACAGGTACCCAGTaGGTGTCCTTGCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVLTGTQ*VSLLSF
Trigger: GAAGCTGAGCAAGGACACTCACTGGGTACCTGTTAG...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAACTCCCTCTCTGCGCTTaGGATTCCTTGATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGELPLCA*DSLMVK
Trigger: TTTTACCATCAAGGAATCTCAAGCGCAGAGAGGGAG...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCTCGATGTTAGGAATCTaGGGGTATTTAGAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQISMLGI*GYLERG
Trigger: TCCCCTTTCTAAATACCCTCAGATTCCTAACATCGA...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp CTTGATGGTAAAATGAGGGAGTCTGGACTAGATGATCTTCAAGGTCCCGTCCAGTGTTGTTTTCTGATATaGCCCTTTCAAATCATGATC +
Preference number: 4 (lower is better)
Translates to: LDGKMRESGLDDLQGPVQCCFLI*PFQIMI
Trigger: GATCATGATTTGAAAGGGGCATATCAGAAAACAACA...CTGGACGGGACCTTGAAGATCATCTAGTCCAGACTCCCTCATTTTACCATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR GCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCGTTGATGGTGAAGTGTaGCTCAGCCTTCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFVDGEV*LSLPEK
Trigger: TTTCTCTGGAAGGCTGAGGCACACTTCACCATCAAC...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTAGCGCTGTGCAGAACTaGGGTTGGACTTTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVSAVQN*GWTLPF
Trigger: GAAAGGCAAAGTCCAACCCCAGTTCTGCACAGCGCT...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGGGTCAAAATTCTTCTaGGCAACCGTGTCATGTACC +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGGSKFF*ATVSCT
Trigger: GGTACATGACACGGTTGCCCAGAAGAATTTTGACCC...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAAAGCGATCTTCCTCCTaGGTGGCTGGGATGATTTTT +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGKRSSS*VAGMIF
Trigger: AAAAATCATCCCAGCCACCCAGGAGGAAGATCGCTT...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAAAAGCGATCTTCCTCCTaGGTGGCTGGGATGATTTTT +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGEKRSSS*VAGMIF
Trigger: AAAAATCATCCCAGCCACCCAGGAGGAAGATCGCTT...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAAGAATGGCCTCCAGGCTaGTTCCATACAGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGEEWPPG*FHTDFP
Trigger: AGGAAAATCTGTATGGAACCAGCCTGGAGGCCATTC...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCGAATGGCCTCCAGGCTaGTTCCATACAGATTTTCCT +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFEWPPG*FHTDFP
Trigger: AGGAAAATCTGTATGGAACCAGCCTGGAGGCCATTC...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACTGTGTCCTCACAAGCTaGGGACATAGGTGGCGTTTT +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYCVLTS*GHRWRF
Trigger: AAAACGCCACCTATGTCCCCAGCTTGTGAGGACACA...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTCTGCTGCTCATCAAATaGGGCTGCTGTGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVLLLIK*GCCVLT
Trigger: TGTGAGGACACAGCAGCCCCATTTGATGAGCAGCAG...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCGTCTGCACAAAGTCCTaGGAAATGACTGCGAATGTT +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFVCTKS*EMTANV
Trigger: AACATTCGCAGTCATTTCTCAGGACTTTGTGCAGAC...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS-3UTR TCA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGTGGAGGTGGGTATTaGAGCTCCATCAAGCATATT +
Preference number: 4 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICGGGGY*SSIKHI
Trigger: AATATGCTTGATGGAGCTTCAATACCCACCTCCACC...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS-3UTR TCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACCTCCCTCTCTGCGCTTaGGATTCCTTGATGGTAAAA +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYLPLCA*DSLMVK
Trigger: TTTTACCATCAAGGAATCTCAAGCGCAGAGAGGGAG...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR TCA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCAACGTTTTAGTGCTTaGAGACAGGGGAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFQRFSA*RQGNFS
Trigger: ACTGAAGTTCCCCTGTCTTCAAGCACTAAAACGTTG...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGACAACGTTTTAGTGCTTaGAGACAGGGGAACTTCAGT +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGQRFSA*RQGNFS
Trigger: ACTGAAGTTCCCCTGTCTTCAAGCACTAAAACGTTG...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CCA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGGTCAAAATTCTTCTaGGCAACCGTGTCATGTACC +
Preference number: 4 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICGSKFF*ATVSCT
Trigger: GGTACATGACACGGTTGCCCAGAAGAATTTTGACCC...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACAAGCGATCTTCCTCCTaGGTGGCTGGGATGATTTTT +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYKRSSS*VAGMIF
Trigger: AAAAATCATCCCAGCCACCCAGGAGGAAGATCGCTT...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGATTGTTTCAGTGCTTCTaGCTCCACATCCACCAAACA +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGLFQCF*LHIHQT
Trigger: TGTTTGGTGGATGTGGAGCCAGAAGCACTGAAACAA...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCTTGTTTCAGTGCTTCTaGCTCCACATCCACCAAACA +
Preference number: 4 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFLFQCF*LHIHQT
Trigger: TGTTTGGTGGATGTGGAGCCAGAAGCACTGAAACAA...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTACCCACAAAAGACAGTaGCTACTTAACTTTGGTACA +
Preference number: 4 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILTHKRQ*LLNFGT
Trigger: TGTACCAAAGTTAAGTAGCCACTGTCTTTTGTGGGT...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR TCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATGCTTAGACACAAAGTaGTATTCCACTCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGECLDTK*YSTPSF
Trigger: GAAGGAAGGAGTGGAATATCACTTTGTGTCTAAGCA...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGTGCAGAACTGGGGTTaGACTTTGCCTTTCATAATA +
Preference number: 4 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGVQNWG*TLPFII
Trigger: TATTATGAAAGGCAAAGTCCAACCCCAGTTCTGCAC...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACTTGTTTCAGTGCTTCTaGCTCCACATCCACCAAACA +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYLFQCF*LHIHQT
Trigger: TGTTTGGTGGATGTGGAGCCAGAAGCACTGAAACAA...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACGTGCAGAACTGGGGTTaGACTTTGCCTTTCATAATA +
Preference number: 4 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYVQNWG*TLPFII
Trigger: TATTATGAAAGGCAAAGTCCAACCCCAGTTCTGCAC...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAAACCCACAAAAGACAGTaGCTACTTAACTTTGGTACA +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGETHKRQ*LLNFGT
Trigger: TGTACCAAAGTTAAGTAGCCACTGTCTTTTGTGGGT...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR GCA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATGTTGTTTTCTGATATaGCCCTTTCAAATCATGATC +
Preference number: 4 (lower is better)
Translates to: QQTRLPTYTLLDDGICGECCFLI*PFQIMI
Trigger: GATCATGATTTGAAAGGGGCATATCAGAAAACAACA...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS CCA 90 bp TTGGTGTCCCCGACTCGCTTGGCCTGCCACCACGTGGGGTCGTCCTaGCTCACCACCTCCAGGACCTGCCTGCGCTGGAAGGGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LVSPTRLACHHVGSS*LTTSRTCLRWKGRP
Trigger: GGGCCTGCCCTTCCAGCGCAGGCAGGTCCTGGAGGTGGTGAGCCAGGACGACCCCACGTGGTGGCAGGCCAAGCGAGTCGGGGACACCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS CCA 90 bp CGGCTCGAAGGTTGGTGTCCCCGACTCGCTTGGCCTGCCACCACGTaGGGTCGTCCTGGCTCACCACCTCCAGGACCTGCCTGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: RLEGWCPRLAWPATT*GRPGSPPPGPACAG
Trigger: TCCAGCGCAGGCAGGTCCTGGAGGTGGTGAGCCAGGACGACCCCACGTGGTGGCAGGCCAAGCGAGTCGGGGACACCAACCTTCGAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS-3UTR CAA 90 bp TCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGGTGTCCCCGACTCGCTaGGCCTGCCACCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: SFLRATQSLPTAQPEAPPVSPTR*ACHHVG
Trigger: CCCCACGTGGTGGCAGGCCAAGCGAGTCGGGGACAC...CGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS TCA 90 bp CTCCAACGTGGACCAGGCCGCTCCTGTCTGCTGCGCCTCCTCGCATaGTCCTGGCCACCACAACAGCCCCTGAGTGCTCGTCCCGCCGGA +
Preference number: 5 (lower is better)
Translates to: LQRGPGRSCLLRLLA*SWPPQQPLSARPAG
Trigger: TCCGGCGGGACGAGCACTCAGGGGCTGTTGTGGTGGCCAGGATCATGCGAGGAGGCGCAGCAGACAGGAGCGGCCTGGTCCACGTTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS TCA 90 bp GTCTGCTGCGCCTCCTCGCATGATCCTGGCCACCACAACAGCCCCTaGGTGCTCGTCCCGCCGGATGGTGGCACCCAGGGGTTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: VCCASSHDPGHHNSP*VLVPPDGGTQGFLV
Trigger: AACAAGGAACCCCTGGGTGCCACCATCCGGCGGGACGAGCACTCAGGGGCTGTTGTGGTGGCCAGGATCATGCGAGGAGGCGCAGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS GCA 90 bp AGGTGCGGGGTGGACAGCAGCTGGAGCAGCTCCCTCTCATCACTGTaGACGGAGGCGGCCTGCAACTCCTCCATCACGTCCTCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: RCGVDSSWSSSLSSL*TEAACNSSITSSAR
Trigger: CCTCGCTGAGGACGTGATGGAGGAGTTGCAGGCCGCCTCCGTGCACAGTGATGAGAGGGAGCTGCTCCAGCTGCTGTCCACCCCGCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS GCA 90 bp GCTGCGCCTCCTCGCATGATCCTGGCCACCACAACAGCCCCTGAGTaGTCGTCCCGCCGGATGGTGGCACCCAGGGGTTCCTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: AAPPRMILATTTAPE*SSRRMVAPRGSLFF
Trigger: GAAGAACAAGGAACCCCTGGGTGCCACCATCCGGCGGGACGAGCACTCAGGGGCTGTTGTGGTGGCCAGGATCATGCGAGGAGGCGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS CCA 90 bp TCATGTACCATGAGCACAGCCCTCAGGTGCGGGGTGGACAGCAGCTaGAGCAGCTCCCTCTCATCACTGTGCACGGAGGCGGCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: SCTMSTALRCGVDSS*SSSLSSLCTEAACN
Trigger: GTTGCAGGCCGCCTCCGTGCACAGTGATGAGAGGGAGCTGCTCCAGCTGCTGTCCACCCCGCACCTGAGGGCTGTGCTCATGGTACATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS-3UTR CAA 90 bp TTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCAGAACCACCAGGCAGGCCGGCTCGAAGGTaGGTGTCCCCGACTCGCTTG +
Preference number: 5 (lower is better)
Translates to: FASARAVGLPETRSEPPGRPARR*VSPTRL
Trigger: CAAGCGAGTCGGGGACACCAACCTTCGAGCCGGCCT...GCCTGGTGGTTCTGATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CAA 90 bp TCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCCGATCCTCTCCTGGAACCCCTaGGAGGGGATGAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: SATTFCFSSCSRAPRDPILSWNP*EGMRPA
Trigger: AGCCGGCCTCATCCCCTCCAAGGGGTTCCAGGAGAG...GATCGGGTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS GCA 90 bp CCCTGGGACTGGGCCAGAATCTGGCTGATCTCGTCGGGCCGCTTGTaGAGGACTGCGATCCCGTTCACTTCTCGGAGCTCATCTCCAACG +
Preference number: 5 (lower is better)
Translates to: PWDWARIWLISSGRL*RTAIPFTSRSSSPT
Trigger: CGTTGGAGATGAGCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGCCCAGTCCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS-3UTR CAA 90 bp CTTTCGGGGCCTGGTGGTATGTGGAACAGCGACGCCAAAGTGCTGTGGGTTCTCATCTCGTCGGGCCGCTaGTGCAGGACTGCGATCCCG +
Preference number: 5 (lower is better)
Translates to: LSGPGGMWNSDAKVLWVLISSGR*CRTAIP
Trigger: CGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGAT...GAGAACCCACAGCACTTTGGCGTCGCTGTTCCACATACCACCAGGCCCCGAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CAA 90 bp GCGACGCCAAAGTGCTGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCCTCTCCTGGAACCCCTaGGAGGGGATGAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: ATPKCCGFSATTFCFSSCLSWNP*EGMRPA
Trigger: AGCCGGCCTCATCCCCTCCAAGGGGTTCCAGGAGAG...GCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGGCGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR CAA 90 bp AGCTCCGGAGGACATCTTTCCTTCCTGCGAGCCACCCAGTCTCTCCCTACAGCCCTCTCCGGGCTGGTGTaGGTACCTGGCCACCTCTTC +
Preference number: 5 (lower is better)
Translates to: SSGGHLSFLRATQSLPTALSGLV*VPGHLF
Trigger: GAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGAG...GGCTGTAGGGAGAGACTGGGTGGCTCGCAGGAAGGAAAGATGTCCTCCGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR CAA 90 bp GGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCGGGCTCCCAGAGACCTCTCCGGGCTGGTGTaGGTACCTGGCCACCTCTTC +
Preference number: 5 (lower is better)
Translates to: GFSATTFCFSSCSRAPRDLSGLV*VPGHLF
Trigger: GAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGAG...GTCTCTGGGAGCCCGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS-3UTR CAA 90 bp CCACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGAAGACCAGCCACACTCAGCCACCACCTTTaGCTTCAGCTCGTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: PPSLSLQPSRKLLRRPATLSHHL*LQLVQS
Trigger: CGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAG...TGTGGCTGGTCTTCGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS GCA 90 bp CTGGGCCAGAATCTGGCTGATCTCGTCGGGCCGCTTGTGCAGGACTaGGATCCCGTTCACTTCTCGGAGCTCATCTCCAACGTGGACCAG +
Preference number: 5 (lower is better)
Translates to: LGQNLADLVGPLVQD*DPVHFSELISNVDQ
Trigger: CTGGTCCACGTTGGAGATGAGCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS GCA 90 bp GGGCCAGGGTTTCATGCAAACCAGAGTCCTCCGATAGCACTGGCATaGTGGCGTTGTCACCTCCCGACCTCTCCCTGCAGATTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: GPGFHANQSPPIALA*WRCHLPTSPCRFLG
Trigger: CCCGAGGAATCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGGAGGACTCTGGTTTGCATGAAACCCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000496503.5
CDS GCA 90 bp CCGATAGCACTGGCATGCTGGCGTTGTCACCTCCCGACCTCTCCCTaGAGATTCTGGGAGAAGGGGGTGGAGGTGGGTATTGAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: PIALACWRCHLPTSP*RFWEKGVEVGIEAP
Trigger: TGGAGCTTCAATACCCACCTCCACCCCCTTCTCCCAGAATCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS GCA 90 bp GGGCCAGGGTTTCATGCAAACCAGAGTCCTCCGATAGCACTGGCATaGTGGCGTTGTCACCTCCCGACCTCTCCCTGCAGATTCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GPGFHANQSPPIALA*WRCHLPTSPCRFWE
Trigger: CTCCCAGAATCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGGAGGACTCTGGTTTGCATGAAACCCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS GCA 90 bp ACGGACCAGAATCTGGCTGATCTCGTCGGGCCGCTTGTGCAGGACTaGGATCCCGTTCACTTCTCGGAGCTCATCTCCAACGTGGACCAG +
Preference number: 5 (lower is better)
Translates to: TDQNLADLVGPLVQD*DPVHFSELISNVDQ
Trigger: CTGGTCCACGTTGGAGATGAGCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480958.1
CDS CCA 90 bp CCAGGGTTTCATGCAAACCAGAGTCCTCCGATAGCACTGGCATGCTaGCGTTGTCACCTCCCGACCTCTCCCTGCAGATTCCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: PGFHANQSPPIALAC*RCHLPTSPCRFLGL
Trigger: CAGCCCGAGGAATCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGGAGGACTCTGGTTTGCATGAAACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000496503.5
CDS CCA 90 bp AAGACCCAGCACATCCCTAGCAGGCTTGTAGCACGGACCAGAATCTaGCTGATCTCGTCGGGCCGCTTGTGCAGGACTGCGATCCCGTTC +
Preference number: 5 (lower is better)
Translates to: KTQHIPSRLVARTRI*LISSGRLCRTAIPF
Trigger: GAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGTCCGTGCTACAAGCCTGCTAGGGATGTGCTGGGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480958.1
CDS-3UTR CAA 90 bp CACCCAGTCTCTCCCTACAGCCCAGCCGGAAGCTCCTCCGAAGACCAGCCACATATCTCCTCCTTGTGGTaGGAGTCAGGTCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: HPVSPYSPAGSSSEDQPHISSLW*ESGLSW
Trigger: CCAGCTCAGACCTGACTCCAACCACAAGGAGGAGAT...ATGTGGCTGGTCTTCGGAGGAGCTTCCGGCTGGGCTGTAGGGAGAGACTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CAA 90 bp CCTTCCTTCTCATGGCTCTTTCGGGGCCTGGTGGTATGTGGAACAGCGACGCCAGCACCCAGGGGTTCCTaGTTCTTCACCAAGCGGACG +
Preference number: 5 (lower is better)
Translates to: PSFSWLFRGLVVCGTATPAPRGS*FFTKRT
Trigger: CGTCCGCTTGGTGAAGAACAAGGAACCCCTGGGTGC...TGGCGTCGCTGTTCCACATACCACCAGGCCCCGAAAGAGCCATGAGAAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CAA 90 bp CCTACAGCCCAGCCGGAAGCTCCTCCGAAGACCAGCCACATAGTGCCCTTTGAGCTCAGCCACCACCTTTaGCTTCAGCTCGTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: PTAQPEAPPKTSHIVPFELSHHL*LQLVQS
Trigger: CGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAG...CTCAAAGGGCACTATGTGGCTGGTCTTCGGAGGAGCTTCCGGCTGGGCTGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479797.1
ENST00000496503.5
CDS GCA 90 bp CTTGTAGCACGGACCAGAATCTGGCTGATCTCGTCGGGCCGCTTGTaGAGGACTGCGATCCCGTTCACTTCTCGGAGCTCATCTCCAACG +
Preference number: 5 (lower is better)
Translates to: LVARTRIWLISSGRL*RTAIPFTSRSSSPT
Trigger: CGTTGGAGATGAGCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGTCCGTGCTACAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480958.1
CDS CCA 90 bp CTCAGGAAGCCCATCTCCTCCTTGTGGTTGGAGTCAGGTCTGAGCTaGGAGGTCAGCAGGGCCAGGGTTTCATGCAAACCAGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRKPISSLWLESGLS*EVSRARVSCKPESS
Trigger: GGAGGACTCTGGTTTGCATGAAACCCTGGCCCTGCTGACCTCCCAGCTCAGACCTGACTCCAACCACAAGGAGGAGATGGGCTTCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS CCA 90 bp ACAGAGCTTCGTTCTCAGACTTCGGCATCTCAGAATCGCCTCTCCTaGAACCCCTTGGAGGGGATGAGGCCGGCTCGAAGGTTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: TELRSQTSASQNRLS*NPLEGMRPARRLVS
Trigger: GGACACCAACCTTCGAGCCGGCCTCATCCCCTCCAAGGGGTTCCAGGAGAGGCGATTCTGAGATGCCGAAGTCTGAGAACGAAGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479797.1
CDS CCA 90 bp CCAGGGTTTCATGCAAACCAGAGTCCTCCGATAGCACTGGCATGCTaGCGTTGTCACCTCCCGACCTCTCCCTGCAGATTCTGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: PGFHANQSPPIALAC*RCHLPTSPCRFWEK
Trigger: CTTCTCCCAGAATCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGGAGGACTCTGGTTTGCATGAAACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS-3UTR CAA 90 bp GCTGGTGTTGGTACCTGGCCACCTCTTCGTAAGTCAGCAGCTCCGGAGACTCAGAAGCCCATCTCCTCCTaGTGGTTGGAGTCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: AGVGTWPPLRKSAAPETQKPISS*WLESGL
Trigger: CAGACCTGACTCCAACCACAAGGAGGAGATGGGCTT...CTGAGTCTCCGGAGCTGCTGACTTACGAAGAGGTGGCCAGGTACCAACACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS CCA 90 bp TCGATATTGTCAGGCAGAGGCGGGAGAACGGGGTCAAAATTCTTCTaGGCAACCGTGTCATGTACCATGAGCACAGCCCTCAGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: SILSGRGGRTGSKFF*ATVSCTMSTALRCG
Trigger: CCCGCACCTGAGGGCTGTGCTCATGGTACATGACACGGTTGCCCAGAAGAATTTTGACCCCGTTCTCCCGCCTCTGCCTGACAATATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS TCA 90 bp CAGCTGAGAAAACTGAGGCACGGAGAGGTTCAGCACTGTGCACAGTaGCCCACAACCAGTAGAGAGCACAGCCAGAATCGGTCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: QLRKLRHGEVQHCAQ*PTTSREHSQNRSLC
Trigger: GCAGAGAGACCGATTCTGGCTGTGCTCTCTACTGGTTGTGGGTCACTGTGCACAGTGCTGAACCTCTCCGTGCCTCAGTTTTCTCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486600.1
CDS CCA 90 bp AGGGCGCGCATGAACACCTTGCTCTCCTTTAAGCGATCTTCCTCCTaGGTGGCTGGGATGATTTTTAGGGTGATGGATCCCTGGGACTGG +
Preference number: 5 (lower is better)
Translates to: RARMNTLLSFKRSSS*VAGMIFRVMDPWDW
Trigger: CCAGTCCCAGGGATCCATCACCCTAAAAATCATCCCAGCCACCCAGGAGGAAGATCGCTTAAAGGAGAGCAAGGTGTTCATGCGCGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS-3UTR CAA 90 bp CGCCAAAGTGCTGTGGGTTCTCAGCCACCACCTTTTGCTTCAGCTCGTGCAGTCAGAAGCGGCCATCTCTaGCTGCTGCTCATCAAATGG +
Preference number: 5 (lower is better)
Translates to: RQSAVGSQPPPFASARAVRSGHL*LLLIKW
Trigger: CCATTTGATGAGCAGCAGCAAGAGATGGCCGCTTCT...GACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAGAACCCACAGCACTTTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS CCA 90 bp CTCCTCCATCACGTCCTCAGCGAGGGCCACAGCGCTGTGCAGAACTaGGGTTGGACTTTGCCTTTCATAATAGCGAAGCTTCTCATGAAT +
Preference number: 5 (lower is better)
Translates to: LLHHVLSEGHSAVQN*GWTLPFIIAKLLMN
Trigger: ATTCATGAGAAGCTTCGCTATTATGAAAGGCAAAGTCCAACCCCAGTTCTGCACAGCGCTGTGGCCCTCGCTGAGGACGTGATGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS-3UTR CAA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTATCTCGTCGGGCCGCTaGTGCAGGACTGCGATCCCG +
Preference number: 5 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILISSGR*CRTAIP
Trigger: CGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGAT...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CAA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAAGTGTCCCCGACTCGCTaGGCCTGCCACCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: QQTRLPTYTLLDDGICGEVSPTR*ACHHVG
Trigger: CCCCACGTGGTGGCAGGCCAAGCGAGTCGGGGACAC...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTAGGCCGGCTCGAAGGTaGGTGTCCCCGACTCGCTTG +
Preference number: 5 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILRPARR*VSPTRL
Trigger: CAAGCGAGTCGGGGACACCAACCTTCGAGCCGGCCT...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CAA 90 bp TTCCACTCCTTCCTTCTCATGGCTCTTTCGGGGCCTGGTGGTATGTGGAACAGCGTCGGCCTCAAATGCTaGCTTAGACACAAAGTGATA +
Preference number: 5 (lower is better)
Translates to: FHSFLLMALSGPGGMWNSVGLKC*LRHKVI
Trigger: TATCACTTTGTGTCTAAGCAAGCATTTGAGGCCGAC...GCTGTTCCACATACCACCAGGCCCCGAAAGAGCCATGAGAAGGAAGGAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS CCA 90 bp GTTGTCACCTCCCGACCTCTCCCTGCAGATTCTGGGAGAAGGGGGTaGAGGTGGGTATTGAAGCTCCATCAAGCATATTTATTGAACAAA +
Preference number: 5 (lower is better)
Translates to: VVTSRPLPADSGRRG*RWVLKLHQAYLLNK
Trigger: TTTGTTCAATAAATATGCTTGATGGAGCTTCAATACCCACCTCCACCCCCTTCTCCCAGAATCTGCAGGGAGAGGTCGGGAGGTGACAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS-3UTR CAA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTGTGTCCCCGACTCGCTaGGCCTGCCACCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVVSPTR*ACHHVG
Trigger: CCCCACGTGGTGGCAGGCCAAGCGAGTCGGGGACAC...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CAA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGACTCTCCTGGAACCCCTaGGAGGGGATGAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGLSWNP*EGMRPA
Trigger: AGCCGGCCTCATCCCCTCCAAGGGGTTCCAGGAGAG...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAACTCTCCTGGAACCCCTaGGAGGGGATGAGGCCGGCT +
Preference number: 5 (lower is better)
Translates to: QQTRLPTYTLLDDGICGELSWNP*EGMRPA
Trigger: AGCCGGCCTCATCCCCTCCAAGGGGTTCCAGGAGAG...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCACTGGCATGCTGGCGTaGTCACCTCCCGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFTGMLA*SPPDLS
Trigger: GGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGT...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp TGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTAGCACCCAGGGGTTCCTaGTTCTTCACCAAGCGGACG +
Preference number: 5 (lower is better)
Translates to: WLLNFGTKNQGQLACDTLAPRGS*FFTKRT
Trigger: CGTCCGCTTGGTGAAGAACAAGGAACCCCTGGGTGC...TAAAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CAA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACATCTCGTCGGGCCGCTaGTGCAGGACTGCGATCCCG +
Preference number: 5 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYISSGR*CRTAIP
Trigger: CGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGAT...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACAGGCCGGCTCGAAGGTaGGTGTCCCCGACTCGCTTG +
Preference number: 5 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYRPARR*VSPTRL
Trigger: CAAGCGAGTCGGGGACACCAACCTTCGAGCCGGCCT...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCTCTCCGGGCTGGTGTaGGTACCTGGCCACCTCTTC +
Preference number: 5 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFLSGLV*VPGHLF
Trigger: GAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGAG...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCCTCTCCGGGCTGGTGTaGGTACCTGGCCACCTCTTC +
Preference number: 5 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFLSGLV*VPGHLF
Trigger: GAAGAGGTGGCCAGGTACCAACACCAGCCCGGAGAG...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGCACCCAGGGGTTCCTaGTTCTTCACCAAGCGGACG +
Preference number: 5 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGAPRGS*FFTKRT
Trigger: CGTCCGCTTGGTGAAGAACAAGGAACCCCTGGGTGC...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp GTCTACATACTTTTATTCTTGACAGAAATGGTTTACAGTGACGTAGCCATAGTTACTGGCATGCTGGCGTaGTCACCTCCCGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: VYILLFLTEMVYSDVAIVTGMLA*SPPDLS
Trigger: GGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGT...AACTATGGCTACGTCACTGTAAACCATTTCTGTCAAGAATAAAAGTATGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CAA 90 bp CCTCCAGGCTGGTTCCATACAGATTTTCCTTATATTCACCATGTTCCAGGAACTAAATCCTCATCGATATaGTCAGGCAGAGGCGGGAGA +
Preference number: 5 (lower is better)
Translates to: PPGWFHTDFPYIHHVPGTKSSSI*SGRGGR
Trigger: TCTCCCGCCTCTGCCTGACAATATCGATGAGGATTT...AGTTCCTGGAACATGGTGAATATAAGGAAAATCTGTATGGAACCAGCCTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS-3UTR CAA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAACTCAGCCACCACCTTTaGCTTCAGCTCGTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: QQTRLPTYTLLDDGICGELSHHL*LQLVQS
Trigger: CGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAG...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCCTCAGCCACCACCTTTaGCTTCAGCTCGTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFLSHHL*LQLVQS
Trigger: CGACTGCACGAGCTGAAGCAAAAGGTGGTGGCTGAG...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTAGAAGCGGCCATCTCTaGCTGCTGCTCATCAAATGG +
Preference number: 5 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILRSGHL*LLLIKW
Trigger: CCATTTGATGAGCAGCAGCAAGAGATGGCCGCTTCT...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS TCA 90 bp AGAAACTCTATCCCAACGTTAAAGGAAAGGAAATGGAAACTCAGATaGTCTGATGGCTTGTCCAAGGTTGCACAGCTGGAAGGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: RNSIPTLKERKWKLR*SDGLSKVAQLEGGR
Trigger: TCTGCCTCCTTCCAGCTGTGCAACCTTGGACAAGCCATCAGATCATCTGAGTTTCCATTTCCTTTCCTTTAACGTTGGGATAGAGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480958.1
CDS CCA 90 bp AGTGATATTCCACTCCTTCCTTCTCATGGCTCTTTCGGGGCCTGGTaGTATCTTTTAAAGAAAGAAGGAAAGCTGGGCAAAGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: SDIPLLPSHGSFGAW*YLLKKEGKLGKEMS
Trigger: TGACATCTCTTTGCCCAGCTTTCCTTCTTTCTTTAAAAGATACCACCAGGCCCCGAAAGAGCCATGAGAAGGAAGGAGTGGAATATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486600.1
CDS CCA 90 bp CAAAGTGATATTCCACTCCTTCCTTCTCATGGCTCTTTCGGGGCCTaGTGGTATCTTTTAAAGAAAGAAGGAAAGCTGGGCAAAGAGATG +
Preference number: 5 (lower is better)
Translates to: QSDIPLLPSHGSFGA*WYLLKKEGKLGKEM
Trigger: CATCTCTTTGCCCAGCTTTCCTTCTTTCTTTAAAAGATACCACCAGGCCCCGAAAGAGCCATGAGAAGGAAGGAGTGGAATATCACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486600.1
CDS-3UTR CAA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCGGGTGGAGGTGGGTATaGAAGCTCCATCAAGCATAT +
Preference number: 5 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQIGWRWV*KLHQAY
Trigger: ATATGCTTGATGGAGCTTCAATACCCACCTCCACCC...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS-3UTR CAA 90 bp CAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAATTCATCTCCTCCTTGTGGTaGGAGTCAGGTCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QTRLPTYTLLDDGICGEFISSLW*ESGLSW
Trigger: CCAGCTCAGACCTGACTCCAACCACAAGGAGGAGAT...GAATTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCATCTCCTCCTTGTGGTaGGAGTCAGGTCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFISSLW*ESGLSW
Trigger: CCAGCTCAGACCTGACTCCAACCACAAGGAGGAGAT...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCAAGCCCATCTCCTCCTaGTGGTTGGAGTCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFKPISS*WLESGL
Trigger: CAGACCTGACTCCAACCACAAGGAGGAGATGGGCTT...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCAAATCCTCATCGATATaGTCAGGCAGAGGCGGGAGA +
Preference number: 5 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQIKSSSI*SGRGGR
Trigger: TCTCCCGCCTCTGCCTGACAATATCGATGAGGATTT...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CAA 90 bp AGTGGCTACTTAACTTTGGTACAAAGAATCAGGGTCAGCTTGCCTGTGATACTTTCGATGTGCCAAGCATaGTGTGGGGTGATTTCTATG +
Preference number: 5 (lower is better)
Translates to: SGYLTLVQRIRVSLPVILSMCQA*CGVISM
Trigger: CATAGAAATCACCCCACACAATGCTTGGCACATCGA...AAGTATCACAGGCAAGCTGACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS-3UTR CAA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACAAGCCCATCTCCTCCTaGTGGTTGGAGTCAGGTCTG +
Preference number: 5 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYKPISS*WLESGL
Trigger: CAGACCTGACTCCAACCACAAGGAGGAGATGGGCTT...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CCAAAGAGGTGCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCGCGCGCATGAACACCTaGCTCTCCTTTAAGCGATCT +
Preference number: 5 (lower is better)
Translates to: PKRCSEKQQTKTNNKQDFARMNT*LSFKRS
Trigger: AGATCGCTTAAAGGAGAGCAAGGTGTTCATGCGCGC...GAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGCACCTCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGCGCGCATGAACACCTaGCTCTCCTTTAAGCGATCT +
Preference number: 5 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGARMNT*LSFKRS
Trigger: AGATCGCTTAAAGGAGAGCAAGGTGTTCATGCGCGC...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGCGCGCATGAACACCTaGCTCTCCTTTAAGCGATCT +
Preference number: 5 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICARMNT*LSFKRS
Trigger: AGATCGCTTAAAGGAGAGCAAGGTGTTCATGCGCGC...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCGTCGGCCTCAAATGCTaGCTTAGACACAAAGTGATA +
Preference number: 5 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQIVGLKC*LRHKVI
Trigger: TATCACTTTGTGTCTAAGCAAGCATTTGAGGCCGAC...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CAA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACAGAAGCGGCCATCTCTaGCTGCTGCTCATCAAATGG +
Preference number: 5 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYRSGHL*LLLIKW
Trigger: CCATTTGATGAGCAGCAGCAAGAGATGGCCGCTTCT...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp GCAGTGAAAAACAACAGACAAAAACCAACAACAAACAAGACTTCCCACTTATACAAATCCTCATCGATATaGTCAGGCAGAGGCGGGAGA +
Preference number: 5 (lower is better)
Translates to: AVKNNRQKPTTNKTSHLYKSSSI*SGRGGR
Trigger: TCTCCCGCCTCTGCCTGACAATATCGATGAGGATTT...GTATAAGTGGGAAGTCTTGTTTGTTGTTGGTTTTTGTCTGTTGTTTTTCACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp GGACCAAGGCAACTGTCAGTAACAAAAGGGACAATGGATGGAATAGAACAAATCAGTGGCTACTTAACTTaGGTACAAAGAATCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GPRQLSVTKGTMDGIEQISGYLT*VQRIRV
Trigger: GACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT...GATTTGTTCTATTCCATCCATTGTCCCTTTTGTTACTGACAGTTGCCTTGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS-3UTR CAA 90 bp AACCAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGTCGGCCTCAAATGCTaGCTTAGACACAAAGTGATA +
Preference number: 5 (lower is better)
Translates to: NQQQTRLPTYTLLDDGICVGLKC*LRHKVI
Trigger: TATCACTTTGTGTCTAAGCAAGCATTTGAGGCCGAC...ACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS-3UTR CAA 90 bp CAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGAGAAAGTGGCTACTTAACTTaGGTACAAAGAATCAGGGTC +
Preference number: 5 (lower is better)
Translates to: QQTRLPTYTLLDDGICGESGYLT*VQRIRV
Trigger: GACCCTGATTCTTTGTACCAAAGTTAAGTAGCCACT...TTCTCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS CCA 90 bp CTTTACCCTTTTCCAGATGTTAGCATGCCAATGATAACCACACATTaGTTGAGAAAGAAACTCTATCCCAACGTTAAAGGAAAGGAAATG +
Preference number: 5 (lower is better)
Translates to: LYPFPDVSMPMITTH*LRKKLYPNVKGKEM
Trigger: CATTTCCTTTCCTTTAACGTTGGGATAGAGTTTCTTTCTCAACCAATGTGTGGTTATCATTGGCATGCTAACATCTGGAAAAGGGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480958.1
CDS-3UTR CAA 90 bp CAACAACAAACAAGACTTCCCACTTATACTCTTCTCGATGATGGAATTTGTGGATCTATGATAAACTTTTaGTCTGCACAAAGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: QQQTRLPTYTLLDDGICGSMINF*SAQSPE
Trigger: CTCAGGACTTTGTGCAGACAAAAAGTTTATCATAGA...TCCACAAATTCCATCATCGAGAAGAGTATAAGTGGGAAGTCTTGTTTGTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS GCA 72 bp TCGCTCTCCGAAGGAACCTCGTCGCGCCGGGATGTGTaGTCCGCGAACGGGAGCCGCGCGAGTGCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: SLSEGTSSRRDV*SANGSRASAQS
Trigger: GCTCTGGGCACTCGCGCGGCTCCCGTTCGCGGAGCACACATCCCGGCGCGACGAGGTTCCTTCGGAGAGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496503.5
CDS TCA 72 bp GCCTCCTCGCATGATCCTGGCCACCACAACAGCCCCTaGGTGCTCGTCCCGCCGGATGGTGGCACCCAGGGG +
Preference number: 6 (lower is better)
Translates to: ASSHDPGHHNSP*VLVPPDGGTQG
Trigger: CCCCTGGGTGCCACCATCCGGCGGGACGAGCACTCAGGGGCTGTTGTGGTGGCCAGGATCATGCGAGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS CCA 72 bp GGTTGGTGTCCCCGACTCGCTTGGCCTGCCACCACGTaGGGTCGTCCTGGCTCACCACCTCCAGGACCTGCC +
Preference number: 6 (lower is better)
Translates to: GWCPRLAWPATT*GRPGSPPPGPA
Trigger: GGCAGGTCCTGGAGGTGGTGAGCCAGGACGACCCCACGTGGTGGCAGGCCAAGCGAGTCGGGGACACCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS GCA 72 bp CCTCGCATGATCCTGGCCACCACAACAGCCCCTGAGTaGTCGTCCCGCCGGATGGTGGCACCCAGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: PRMILATTTAPE*SSRRMVAPRGS
Trigger: GGAACCCCTGGGTGCCACCATCCGGCGGGACGAGCACTCAGGGGCTGTTGTGGTGGCCAGGATCATGCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS TCA 72 bp GGACCAGGCCGCTCCTGTCTGCTGCGCCTCCTCGCATaGTCCTGGCCACCACAACAGCCCCTGAGTGCTCGT +
Preference number: 6 (lower is better)
Translates to: GPGRSCLLRLLA*SWPPQQPLSAR
Trigger: ACGAGCACTCAGGGGCTGTTGTGGTGGCCAGGATCATGCGAGGAGGCGCAGCAGACAGGAGCGGCCTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS GCA 72 bp AGCAGCTCCCTCTCATCACTGTGCACGGAGGCGGCCTaGAACTCCTCCATCACGTCCTCAGCGAGGGCCACA +
Preference number: 6 (lower is better)
Translates to: SSSLSSLCTEAA*NSSITSSARAT
Trigger: TGTGGCCCTCGCTGAGGACGTGATGGAGGAGTTGCAGGCCGCCTCCGTGCACAGTGATGAGAGGGAGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS GCA 72 bp GTGGACAGCAGCTGGAGCAGCTCCCTCTCATCACTGTaGACGGAGGCGGCCTGCAACTCCTCCATCACGTCC +
Preference number: 6 (lower is better)
Translates to: VDSSWSSSLSSL*TEAACNSSITS
Trigger: GGACGTGATGGAGGAGTTGCAGGCCGCCTCCGTGCACAGTGATGAGAGGGAGCTGCTCCAGCTGCTGTCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS GCA 72 bp CTCATCTCCAACGTGGACCAGGCCGCTCCTGTCTGCTaGGCCTCCTCGCATGATCCTGGCCACCACAACAGC +
Preference number: 6 (lower is better)
Translates to: LISNVDQAAPVC*ASSHDPGHHNS
Trigger: GCTGTTGTGGTGGCCAGGATCATGCGAGGAGGCGCAGCAGACAGGAGCGGCCTGGTCCACGTTGGAGATGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS CAA 72 bp GACTGGGCCAGAATCTGGCTGATCTCGTCGGGCCGCTaGTGCAGGACTGCGATCCCGTTCACTTCTCGGAGC +
Preference number: 6 (lower is better)
Translates to: DWARIWLISSGR*CRTAIPFTSRS
Trigger: GCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGCCCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS CAA 72 bp GCACGGACCAGAATCTGGCTGATCTCGTCGGGCCGCTaGTGCAGGACTGCGATCCCGTTCACTTCTCGGAGC +
Preference number: 6 (lower is better)
Translates to: ARTRIWLISSGR*CRTAIPFTSRS
Trigger: GCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGTCCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480958.1
CDS CAA 90 bp GATCCCTGGGACTGGGCCAGAATCTGGCTGATCTCGTCGGGCCGCTaGTGCAGGACTGCGATCCCGTTCACTTCTCGGAGCTCATCTCCA +
Preference number: 6 (lower is better)
Translates to: DPWDWARIWLISSGR*CRTAIPFTSRSSSP
Trigger: TGGAGATGAGCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGCCCAGTCCCAGGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS GCA 72 bp TGGGCCAGAATCTGGCTGATCTCGTCGGGCCGCTTGTaGAGGACTGCGATCCCGTTCACTTCTCGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: WARIWLISSGRL*RTAIPFTSRSS
Trigger: TGAGCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS GCA 72 bp CGGACCAGAATCTGGCTGATCTCGTCGGGCCGCTTGTaGAGGACTGCGATCCCGTTCACTTCTCGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: RTRIWLISSGRL*RTAIPFTSRSS
Trigger: TGAGCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480958.1
CDS CCA 72 bp CACATCCCTAGCAGGCTTGTAGCACGGACCAGAATCTaGCTGATCTCGTCGGGCCGCTTGTGCAGGACTGCG +
Preference number: 6 (lower is better)
Translates to: HIPSRLVARTRI*LISSGRLCRTA
Trigger: CGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGTCCGTGCTACAAGCCTGCTAGGGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480958.1
CDS CCA 72 bp CGTTCTCAGACTTCGGCATCTCAGAATCGCCTCTCCTaGAACCCCTTGGAGGGGATGAGGCCGGCTCGAAGG +
Preference number: 6 (lower is better)
Translates to: RSQTSASQNRLS*NPLEGMRPARR
Trigger: CCTTCGAGCCGGCCTCATCCCCTCCAAGGGGTTCCAGGAGAGGCGATTCTGAGATGCCGAAGTCTGAGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479797.1
CDS CAA 72 bp ACTTCGGCATCTCAGAATCGCCTCTCCTGGAACCCCTaGGAGGGGATGAGGCCGGCTCGAAGGTTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: TSASQNRLSWNP*EGMRPARRLVS
Trigger: GGACACCAACCTTCGAGCCGGCCTCATCCCCTCCAAGGGGTTCCAGGAGAGGCGATTCTGAGATGCCGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479797.1
CDS CAA 90 bp GTTTCATGCAAACCAGAGTCCTCCGATAGCACTGGCATGCTGGCGTaGTCACCTCCCGACCTCTCCCTGCAGATTCCTCGGGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: VSCKPESSDSTGMLA*SPPDLSLQIPRAAP
Trigger: GGGAGCAGCCCGAGGAATCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGGAGGACTCTGGTTTGCATGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000496503.5
CDS CAA 72 bp AAACCAGAGTCCTCCGATAGCACTGGCATGCTGGCGTaGTCACCTCCCGACCTCTCCCTGCAGATTCCTCGG +
Preference number: 6 (lower is better)
Translates to: KPESSDSTGMLA*SPPDLSLQIPR
Trigger: CCGAGGAATCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGGAGGACTCTGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000496503.5
CDS CAA 90 bp AGGCTTGTAGCACGGACCAGAATCTGGCTGATCTCGTCGGGCCGCTaGTGCAGGACTGCGATCCCGTTCACTTCTCGGAGCTCATCTCCA +
Preference number: 6 (lower is better)
Translates to: RLVARTRIWLISSGR*CRTAIPFTSRSSSP
Trigger: TGGAGATGAGCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATTCTGGTCCGTGCTACAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480958.1
CDS CAA 90 bp GTTTCATGCAAACCAGAGTCCTCCGATAGCACTGGCATGCTGGCGTaGTCACCTCCCGACCTCTCCCTGCAGATTCTGGGAGAAGGGGGT +
Preference number: 6 (lower is better)
Translates to: VSCKPESSDSTGMLA*SPPDLSLQILGEGG
Trigger: ACCCCCTTCTCCCAGAATCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGGAGGACTCTGGTTTGCATGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398393.5
CDS GCA 72 bp AATCTGGCTGATCTCGTCGGGCCGCTTGTGCAGGACTaGGATCCCGTTCACTTCTCGGAGCTCATCTCCAAC +
Preference number: 6 (lower is better)
Translates to: NLADLVGPLVQD*DPVHFSELISN
Trigger: GTTGGAGATGAGCTCCGAGAAGTGAACGGGATCGCAGTCCTGCACAAGCGGCCCGACGAGATCAGCCAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS CCA 72 bp CATGCAAACCAGAGTCCTCCGATAGCACTGGCATGCTaGCGTTGTCACCTCCCGACCTCTCCCTGCAGATTC +
Preference number: 6 (lower is better)
Translates to: HANQSPPIALAC*RCHLPTSPCRF
Trigger: GAATCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGGAGGACTCTGGTTTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
CDS CCA 72 bp CCCATCTCCTCCTTGTGGTTGGAGTCAGGTCTGAGCTaGGAGGTCAGCAGGGCCAGGGTTTCATGCAAACCA +
Preference number: 6 (lower is better)
Translates to: PISSLWLESGLS*EVSRARVSCKP
Trigger: TGGTTTGCATGAAACCCTGGCCCTGCTGACCTCCCAGCTCAGACCTGACTCCAACCACAAGGAGGAGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS GCA 72 bp TTTCATGCAAACCAGAGTCCTCCGATAGCACTGGCATaGTGGCGTTGTCACCTCCCGACCTCTCCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: FHANQSPPIALA*WRCHLPTSPCR
Trigger: TCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGGAGGACTCTGGTTTGCATGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS CCA 72 bp TCAGGCAGAGGCGGGAGAACGGGGTCAAAATTCTTCTaGGCAACCGTGTCATGTACCATGAGCACAGCCCTC +
Preference number: 6 (lower is better)
Translates to: SGRGGRTGSKFF*ATVSCTMSTAL
Trigger: GAGGGCTGTGCTCATGGTACATGACACGGTTGCCCAGAAGAATTTTGACCCCGTTCTCCCGCCTCTGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS CCA 72 bp CATGCAAACCAGAGTCCTCCGATAGCACTGGCATGCTaGCGTTGTCACCTCCCGACCTCTCCCTGCAGATTT +
Preference number: 6 (lower is better)
Translates to: HANQSPPIALAC*RCHLPTSPCRF
Trigger: AAATCTGCAGGGAGAGGTCGGGAGGTGACAACGCCAGCATGCCAGTGCTATCGGAGGACTCTGGTTTGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589375.5
CDS TCA 72 bp GGAAGCTCCTCCGAAGACCAGCCACATAGTGCCCTTTaGGGTAGCCCTCACAGTCACAGGTCTCTTTGTCAC +
Preference number: 6 (lower is better)
Translates to: GSSSEDQPHSAL*GSPHSHRSLCH
Trigger: GTGACAAAGAGACCTGTGACTGTGAGGGCTACCTCAAAGGGCACTATGTGGCTGGTCTTCGGAGGAGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398389.9
ENST00000398393.5
CDS CCA 72 bp CACGTCCTCAGCGAGGGCCACAGCGCTGTGCAGAACTaGGGTTGGACTTTGCCTTTCATAATAGCGAAGCTT +
Preference number: 6 (lower is better)
Translates to: HVLSEGHSAVQN*GWTLPFIIAKL
Trigger: AAGCTTCGCTATTATGAAAGGCAAAGTCCAACCCCAGTTCTGCACAGCGCTGTGGCCCTCGCTGAGGACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS CAA 90 bp CCATCACGTCCTCAGCGAGGGCCACAGCGCTGTGCAGAACTGGGGTaGGACTTTGCCTTTCATAATAGCGAAGCTTCTCATGAATCTTCA +
Preference number: 6 (lower is better)
Translates to: PSRPQRGPQRCAELG*DFAFHNSEASHESS
Trigger: TGAAGATTCATGAGAAGCTTCGCTATTATGAAAGGCAAAGTCCAACCCCAGTTCTGCACAGCGCTGTGGCCCTCGCTGAGGACGTGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS CCA 72 bp ATGAACACCTTGCTCTCCTTTAAGCGATCTTCCTCCTaGGTGGCTGGGATGATTTTTAGGGTGATGGATCCC +
Preference number: 6 (lower is better)
Translates to: MNTLLSFKRSSS*VAGMIFRVMDP
Trigger: GGGATCCATCACCCTAAAAATCATCCCAGCCACCCAGGAGGAAGATCGCTTAAAGGAGAGCAAGGTGTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000496503.5
ENST00000589375.5
CDS CAA 72 bp GAGGGCCACAGCGCTGTGCAGAACTGGGGTTGGACTTaGCCTTTCATAATAGCGAAGCTTCTCATGAATCTT +
Preference number: 6 (lower is better)
Translates to: EGHSAVQNWGWT*PFIIAKLLMNL
Trigger: AAGATTCATGAGAAGCTTCGCTATTATGAAAGGCAAAGTCCAACCCCAGTTCTGCACAGCGCTGTGGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398389.9
ENST00000398393.5
ENST00000480958.1
ENST00000496503.5
ENST00000589375.5
CDS CCA 72 bp CCACTCCTTCCTTCTCATGGCTCTTTCGGGGCCTGGTaGTATCTTTTAAAGAAAGAAGGAAAGCTGGGCAAA +
Preference number: 6 (lower is better)
Translates to: PLLPSHGSFGAW*YLLKKEGKLGK
Trigger: TTTGCCCAGCTTTCCTTCTTTCTTTAAAAGATACCACCAGGCCCCGAAAGAGCCATGAGAAGGAAGGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486600.1
CDS CCA 72 bp ATTCCACTCCTTCCTTCTCATGGCTCTTTCGGGGCCTaGTGGTATCTTTTAAAGAAAGAAGGAAAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: IPLLPSHGSFGA*WYLLKKEGKLG
Trigger: GCCCAGCTTTCCTTCTTTCTTTAAAAGATACCACCAGGCCCCGAAAGAGCCATGAGAAGGAAGGAGTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486600.1
CDS TCA 72 bp TATCAGGCACTGTGCCTTTCCAGGCAGGCGTATCACTaGTTCACACAACAACTCTTTGATGTAGGCAAAAGG +
Preference number: 6 (lower is better)
Translates to: YQALCLSRQAYH*FTQQLFDVGKR
Trigger: CCTTTTGCCTACATCAAAGAGTTGTTGTGTGAATCAGTGATACGCCTGCCTGGAAAGGCACAGTGCCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486600.1
CDS CAA 90 bp TACCCTTTTCCAGATGTTAGCATGCCAATGATAACCACACATTGGTaGAGAAAGAAACTCTATCCCAACGTTAAAGGAAAGGAAATGGAA +
Preference number: 6 (lower is better)
Translates to: YPFPDVSMPMITTHW*RKKLYPNVKGKEME
Trigger: TTCCATTTCCTTTCCTTTAACGTTGGGATAGAGTTTCTTTCTCAACCAATGTGTGGTTATCATTGGCATGCTAACATCTGGAAAAGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480958.1