RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPND (Homo sapiens)

Ensembl gene IDs: ENSG00000008382

Ensembl transcript IDs: ENST00000262966.12, ENST00000359935.8, ENST00000594162.1, ENST00000594716.5, ENST00000596722.5, ENST00000597036.5, ENST00000599840.6, ENST00000601877.1

Found 429 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGACACAGACCAGTGAGAGAAGCCTCACCAGCCCGCAGCCCATaGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGA +
Preference number: 1 (lower is better)
Translates to: QGHRPVREASPARSP*QLGTIGSARAGNGR
Trigger: TCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCTCACTGGTCTGTGTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR TCA 90 bp GGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGACACAGACCAGTaGGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAA +
Preference number: 1 (lower is better)
Translates to: GCHSHWAFAGRDTDQ*EKPHQPAAHGSWGQ
Trigger: TTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCTCACTGGTCTGTGTCCCTGCCAGCAAAGGCCCAGTGACTATGGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR CCA 90 bp CATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATaGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGACACAGAC +
Preference number: 1 (lower is better)
Translates to: HWSGSCPGRRPSPHP*GCHSHWAFAGRDTD
Trigger: GTCTGTGTCCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR-3UTR CCA 90 bp GGACGTAGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTTGGCAGTGCCCGGGCTaGGAACGGGAGAGTGCACAC +
Preference number: 2 (lower is better)
Translates to: GRRPSPHPWGCHSHWAFAWQCPG*ERESAH
Trigger: GTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCA...AGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR CAA 90 bp GTAGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTaGCTGGCAGGGACACAGACCAGTGAGAGAAGCCTCACCAGCCCG +
Preference number: 2 (lower is better)
Translates to: VGHLHIHGDAIVTGP*LAGTQTSERSLTSP
Trigger: CGGGCTGGTGAGGCTTCTCTCACTGGTCTGTGTCCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR-3UTR CCA 90 bp GTAGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGCAGCCCATGGCAGCTaGGGACAATTGGCAGTGCCC +
Preference number: 2 (lower is better)
Translates to: VGHLHIHGDAIVTGPLLAAAHGS*GQLAVP
Trigger: GGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGC...TGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR-3UTR CCA 90 bp GTGAAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCCAGCCCGCAGCCCATaGCAGCTGGGGACAATTGGC +
Preference number: 2 (lower is better)
Translates to: VKDVIGQEAVLDVGHLHIPARSP*QLGTIG
Trigger: GCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGG...GATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR-3UTR GCA 90 bp AAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATGGGGACAATTGGCAGTaGCCGGGCTGGGAACGGGAG +
Preference number: 2 (lower is better)
Translates to: KDVIGQEAVLDVGHLHIHGDNWQ*PGWERE
Trigger: CTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCC...ATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR-3UTR CCA 90 bp GTGAAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCGCAGCTGGGGACAATTaGCAGTGCCCGGGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: VKDVIGQEAVLDVGHLHIAAGDN*QCPGWE
Trigger: TTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGC...GATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR GCA 72 bp AGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTaGCCGGGCTGGGAACGGGAGAGTGCACACCCCGGC +
Preference number: 3 (lower is better)
Translates to: SPQPMAAGDNWQ*PGWERESAHPG
Trigger: GCCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR CCA 72 bp CTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTaGCAGTGCCCGGGCTGGGAACGGGAGAGTGCACAC +
Preference number: 3 (lower is better)
Translates to: LTSPQPMAAGDN*QCPGWERESAH
Trigger: GTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR-3UTR CAA 90 bp CCTCACGAGGTCAGGGGAACCCTTGTAGAACTCCACCAGCAGCATCATCTCGTGGGCAGCTGGGGACAATaGGCAGTGCCCGGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: PHEVRGTLVELHQQHHLVGSWGQ*AVPGLG
Trigger: TCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCC...CACGAGATGATGCTGCTGGTGGAGTTCTACAAGGGTTCCCCTGACCTCGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR CCA 72 bp GGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATaGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: GSCPGRRPSPHP*GCHSHWAFAGR
Trigger: CCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR GCA 72 bp TGTCCTGGACGTAGGCCATCTCCACATCCATGGGGATaGCATAGTCACTGGGCCTTTGCTGGCAGGGACACA +
Preference number: 3 (lower is better)
Translates to: CPGRRPSPHPWG*HSHWAFAGRDT
Trigger: TGTGTCCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
3UTR CCA 72 bp ACTCCACCAGCAGCATCATCTCGTGAAGGATGTCATTaGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCA +
Preference number: 3 (lower is better)
Translates to: TPPAASSREGCH*SGSCPGRRPSP
Trigger: TGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTTCACGAGATGATGCTGCTGGTGGAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp CCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGCCCAGGCGCTGGGTaGGTTGAAGGTCTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PARSPWQLGTIGSARAGNGPGAG*VEGLPG
Trigger: ACCGGGCAGACCTTCAACTCACCCAGCGCCTGGGCC...GTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp ACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAAGGCAGCTGCAGTCTCTaGGTCCCCGAGCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TSPQPMAAGDNWQCPGWEGSCSL*VPEPAP
Trigger: CGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCC...TTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp ACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGTGGGCAGGCTCTaGAGGGCTCTTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: TSPQPMAAGDNWQCPGWERVGRL*RALPQW
Trigger: CCACTGGGGAAGAGCCCTTCAGAGCCTGCCCACCCG...TTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCGGCGTGTGCAGCTGGTaGAGCCGGAGCCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGGVCSW*SRSQVA
Trigger: GGCCACCTGGCTCCGGCTGCACCAGCTGCACACGCC...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp GCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGCGCGGCTGCCCAGCATaGAGTAGCGGACCGGAACCC +
Preference number: 4 (lower is better)
Translates to: AAHGSWGQLAVPGLGTGERGCPA*SSGPEP
Trigger: GGGTTCCGGTCCGCTACTGCATGCTGGGCAGCCGCG...CTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp CGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGCTTCCCTGGGGTTGTaGCCTCCGGGTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RSPWQLGTIGSARAGNGRASLGL*PPGGQA
Trigger: AGCCTGCCCACCCGGAGGCCACAACCCCAGGGAAGC...TCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCGGGTGTGGGGGTTCCTaGCCAAGTCGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGGCGGS*PSRGCP
Trigger: TGGGCAGCCGCGACTTGGCCAGGAACCCCCACACCC...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
3UTR CAA 72 bp CCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATaGGCAGTGCCCGGGCTGGGAACGGGAGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: PHQPAAHGSWGQ*AVPGLGTGECT
Trigger: TGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGGCGTGTGCAGCTGGTaGAGCCGGAGCCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKGVCSW*SRSQVA
Trigger: GGCCACCTGGCTCCGGCTGCACCAGCTGCACACGCC...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp CGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGACTGGGAACGGGAGAGTaGACACCCCGGCTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSPWQLGTIGSARAGNGRLGTGE*TPRLSS
Trigger: AGAGCTGAGCCGGGGTGTGCACTCTCCCGTTCCCAG...TCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp AGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGTGCACACCCCGGGATGTCCTGCAGAGATaGCAGCGCCGGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: SWGQLAVPGLGTGECTPRDVLQR*QRRAVW
Trigger: CCACACAGCCCGGCGCTGCCATCTCTGCAGGACATC...CCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp AGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGTGCACACCCCGGGCAGCCCATGGCAGCTaGGGACAATTGGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SWGQLAVPGLGTGECTPRAAHGS*GQLAVP
Trigger: GGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGC...CCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp AGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTCTGGCCTTTGTACTTaGCAGAGGCCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: SLTSPQPMAAGDNWQCPGSGLCT*QRPSHS
Trigger: GCTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGA...GCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCCTCAGCTCCCCTGCTTaGGGACGCCGCACACCTGTT +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGLSSPA*GRRTPV
Trigger: AACAGGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAG...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp GGGACACAGACCAGTGAGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGGTTCACCAGCTTCTTaGAGTGGGTGGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GTQTSERSLTSPQPMAAGGSPAS*SGWPRR
Trigger: GCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACC...CCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCTCACTGGTCTGTGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCGGTTCACCAGCTTCTTaGAGTGGGTGGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGGSPAS*SGWPRR
Trigger: GCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACC...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCGTGTGCAGCTGGTaGAGCCGGAGCCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALEGVCSW*SRSQVA
Trigger: GGCCACCTGGCTCCGGCTGCACCAGCTGCACACGCC...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGCGCGGCTGCCCAGCATaGAGTAGCGGACCGGAACCC +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKRGCPA*SSGPEP
Trigger: GGGTTCCGGTCCGCTACTGCATGCTGGGCAGCCGCG...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCTGGCCAAGTCGCGGCTaGCCAGCATGCAGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGWPSRG*PACSSG
Trigger: TCCGCTACTGCATGCTGGGCAGCCGCGACTTGGCCA...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCTCCCCAGGTAGTAGATaGACAGCACCCCGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGSPGSR*TAPRRQ
Trigger: CTGGCGCCGGGGTGCTGTCCATCTACTACCTGGGGA...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp AGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCGTTGTGGCCTCCGGGTaGGCAGGCTCTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: REASPARSPWQLGTIGSAVVASG*AGSEGL
Trigger: GAGCCCTTCAGAGCCTGCCCACCCGGAGGCCACAAC...GGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCTTCCCTGGGGTTGTaGCCTCCGGGTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKASLGL*PPGGQA
Trigger: AGCCTGCCCACCCGGAGGCCACAACCCCAGGGAAGC...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCCTGTGTGGGTGGCTGTaGTACCAGCCCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGLCGWL*YQPTRD
Trigger: GTCCCTGGTGGGCTGGTACCACAGCCACCCACACAG...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGCAGCGCCGGGCTGTGTaGGTGGCTGTGGTACCAGCC +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKQRRAV*VAVVPA
Trigger: GGCTGGTACCACAGCCACCCACACAGCCCGGCGCTG...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCGATGTCCTGCAGAGATaGCAGCGCCGGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGDVLQR*QRRAVW
Trigger: CCACACAGCCCGGCGCTGCCATCTCTGCAGGACATC...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCTGGCTCCAGGGTTCCTaGAGCCTCACGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGWLQGS*SLTRSG
Trigger: CCCTGACCTCGTGAGGCTCCAGGAACCCTGGAGCCA...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GGACACAGACCAGTGAGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGGCAGCTGGGGACAATTaGCAGTGCCCGGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GHRPVREASPARSPWQLGAAGDN*QCPGWE
Trigger: TTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGC...CCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCTCACTGGTCTGTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCCGGTCTCCTGCCACATaGTCCTTCCGTCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGRSPAT*SFRLAA
Trigger: TGCAGCCAGACGGAAGGATCATGTGGCAGGAGACCG...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGGGCCCAGGCGCTGGGTaGGTTGAAGGTCTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWGPGAG*VEGLPG
Trigger: ACCGGGCAGACCTTCAACTCACCCAGCGCCTGGGCC...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCCCAGGCGCTGGGTaGGTTGAAGGTCTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALEGPGAG*VEGLPG
Trigger: ACCGGGCAGACCTTCAACTCACCCAGCGCCTGGGCC...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp GCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGACTCTTGTCCTCTGCTaGGACCCCTGCCAGAACGTC +
Preference number: 4 (lower is better)
Translates to: AAHGSWGQLAVPGLGTGETLVLC*DPCQNV
Trigger: GACGTTCTGGCAGGGGTCTCAGCAGAGGACAAGAGT...CTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGCGGGTGGGCAGGCTCTaGAGGGCTCTTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWRVGRL*RALPQW
Trigger: CCACTGGGGAAGAGCCCTTCAGAGCCTGCCCACCCG...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp GGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGTGCACACCCCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GSWGQLAVPGLGTGECTPHHPER*DLGLGA
Trigger: GGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATG...GGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp ACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAAGGTGAGTTGAAGGTCTaGCCGGTCTCCTGCCACATG +
Preference number: 4 (lower is better)
Translates to: TSPQPMAAGDNWQCPGWEGELKV*PVSCHM
Trigger: CATGTGGCAGGAGACCGGGCAGACCTTCAACTCACC...TTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGCGCGGCTGCCCAGCATaGAGTAGCGGACCGGAACCC +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWRGCPA*SSGPEP
Trigger: GGGTTCCGGTCCGCTACTGCATGCTGGGCAGCCGCG...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCGGACAGCGAGAGGCTaGAGGGAGGCCGCTCGCCCC +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPARTARG*REAARP
Trigger: GGGGCGAGCGGCCTCCCTGCAGCCTCTCGCTGTCCG...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596722.5
CDS-3UTR CCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGCAGGCGTGTGCAGCTaGTGCAGCCGGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALEAGVCS*CSRSQV
Trigger: CACCTGGCTCCGGCTGCACCAGCTGCACACGCCTGC...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGTTGTGGCCTCCGGGTaGGCAGGCTCTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKVVASG*AGSEGL
Trigger: GAGCCCTTCAGAGCCTGCCCACCCGGAGGCCACAAC...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGCTTCCCTGGGGTTGTaGCCTCCGGGTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALEASLGL*PPGGQA
Trigger: AGCCTGCCCACCCGGAGGCCACAACCCCAGGGAAGC...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GGGTTCCTGGAGCCTCACGAGGTCAGGGGAACCCTTGTAGAACTCCACCAGCAGGGGTGTGGGGGTTCCTaGCCAAGTCGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GFLEPHEVRGTLVELHQQGCGGS*PSRGCP
Trigger: TGGGCAGCCGCGACTTGGCCAGGAACCCCCACACCC...CTGCTGGTGGAGTTCTACAAGGGTTCCCCTGACCTCGTGAGGCTCCAGGAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGGGGTGTGGGGGTTCCTaGCCAAGTCGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWGCGGS*PSRGCP
Trigger: TGGGCAGCCGCGACTTGGCCAGGAACCCCCACACCC...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGGCCGGGCTGTGTGGGTaGCTGTGGTACCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: GHLHIHGDAIVTGPLLAGAGLCG*LWYQPT
Trigger: GGTGGGCTGGTACCACAGCCACCCACACAGCCCGGC...CCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAACAGCGCCGGGCTGTGTaGGTGGCTGTGGTACCAGCC +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALEQRRAV*VAVVPA
Trigger: GGCTGGTACCACAGCCACCCACACAGCCCGGCGCTG...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp AGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGTGCACACCCCGGTCACTGGGCCTTTGCTaGCAGGGACACAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: SWGQLAVPGLGTGECTPRSLGLC*QGHRPV
Trigger: CACTGGTCTGTGTCCCTGCCAGCAAAGGCCCAGTGA...CCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp AGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGTCTCCTGCCACATaGTCCTTCCGTCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: REASPARSPWQLGTIGSARSPAT*SFRLAA
Trigger: TGCAGCCAGACGGAAGGATCATGTGGCAGGAGACCG...GGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCTCTGGCCTTTGTACTTaGCAGAGGCCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGSGLCT*QRPSHS
Trigger: GCTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGA...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGCGGGTGGGCAGGCTCTaGAGGGCTCTTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALRVGRL*RALPQW
Trigger: CCACTGGGGAAGAGCCCTTCAGAGCCTGCCCACCCG...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp AGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCAGGGACACAGACCAGTaGGAGAAGCCTCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: REASPARSPWQLGTIGSARDTDQ*EKPHQP
Trigger: GGGCTGGTGAGGCTTCTCTCACTGGTCTGTGTCCCT...GGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCGGTGAGTTGAAGGTCTaGCCGGTCTCCTGCCACATG +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGGELKV*PVSCHM
Trigger: CATGTGGCAGGAGACCGGGCAGACCTTCAACTCACC...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGGTTCACCAGCTTCTTaGAGTGGGTGGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKGSPAS*SGWPRR
Trigger: GCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACC...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCCGCGGCTGCCCAGCATaGAGTAGCGGACCGGAACCC +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPRGCPA*SSGPEP
Trigger: GGGTTCCGGTCCGCTACTGCATGCTGGGCAGCCGCG...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp CAGGGACACAGACCAGTGAGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGCTCTTCGATGGCAGCTaGAGTCTCTGCGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: QGHRPVREASPARSPWQLLFDGS*SLCVPE
Trigger: CTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAG...CAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCTCACTGGTCTGTGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGAAGGCTCAGCTCCCCTaGTTGAGGACGCCGCACACC +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKKAQLP*LRTPHT
Trigger: GGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAGCCTT...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGACCAGCTTCTTGCAGTaGGTGGCCCAGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKTSFLQ*VAQALG
Trigger: ACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGT...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGCAGGCGTGTGCAGCTaGTGCAGCCGGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALAGVCS*CSRSQV
Trigger: CACCTGGCTCCGGCTGCACCAGCTGCACACGCCTGC...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp AGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGCAGGCGTGTGCAGCTaGTGCAGCCGGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RPSPHPWGCHSHWAFAGRAGVCS*CSRSQV
Trigger: CACCTGGCTCCGGCTGCACCAGCTGCACACGCCTGC...CCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCAGGGCTCTTCCCCAGTaGTCTCCGACTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGRALPQ*SPTLVL
Trigger: GAGGACAAGAGTCGGAGACCACTGGGGAAGAGCCCT...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGGTTGTGGCCTCCGGGTaGGCAGGCTCTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWVVASG*AGSEGL
Trigger: GAGCCCTTCAGAGCCTGCCCACCCGGAGGCCACAAC...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGTCCACCCGCTTCCCTaGGGTTGTGGCCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALVHPLP*GCGLRV
Trigger: CACCCGGAGGCCACAACCCCAGGGAAGCGGGTGGAC...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp AGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGTCCACCCGCTTCCCTaGGGTTGTGGCCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RPSPHPWGCHSHWAFAGRVHPLP*GCGLRV
Trigger: CACCCGGAGGCCACAACCCCAGGGAAGCGGGTGGAC...CCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp AGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCACTTCCACCAGGGTGTaGGGGTTCCTGGCCAAGTCG +
Preference number: 4 (lower is better)
Translates to: REASPARSPWQLGTIGSATSTRV*GFLAKS
Trigger: CGACTTGGCCAGGAACCCCCACACCCTGGTGGAAGT...GGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGCTGTGTGGGTGGCTGTaGTACCAGCCCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKLCGWL*YQPTRD
Trigger: GTCCCTGGTGGGCTGGTACCACAGCCACCCACACAG...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: AAHGSWGQLAVPGLGTGERKVRS*TRGLGC
Trigger: GCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCT...CTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGTGGCTCCAGGGTTCCTaGAGCCTCACGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKWLQGS*SLTRSG
Trigger: CCCTGACCTCGTGAGGCTCCAGGAACCCTGGAGCCA...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAAGGCGCTGGGTGAGTTaGAGGTCTGCCCGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALERRWVS*RSARSP
Trigger: AGGAGACCGGGCAGACCTTCAACTCACCCAGCGCCT...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp AGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCTCACTCCGTGTCAGGTaGCTGTGGAAGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: REASPARSPWQLGTIGSASLRVR*LWKSSR
Trigger: CCTGCTGGACTTCCACAGTCACCTGACACGGAGTGA...GGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGGGTTCACCAGCTTCTTaGAGTGGGTGGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWGSPAS*SGWPRR
Trigger: GCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACC...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp AGACCAGTGAGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTCCGGAACCCGGATCTTaGTGTCCACCCGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RPVREASPARSPWQLGTIPEPGS*CPPASL
Trigger: CAGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGG...AATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCTCACTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGTGTGCGTCGATGTCCTaGAGAGATGGCAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWCASMS*RDGSAG
Trigger: CCCGGCGCTGCCATCTCTGCAGGACATCGACGCACA...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCTCAGCTCCCCTaGTTGAGGACGCCGCACACC +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWKAQLP*LRTPHT
Trigger: GGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAGCCTT...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCAGCGGCTCCGGAGCTaGGGACAGCGAGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPAQRLRS*GQREAA
Trigger: TGCAGCCTCTCGCTGTCCGCAGCTCCGGAGCCGCTG...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596722.5
CDS-3UTR CCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAATCCCCAGGTAGTAGATaGACAGCACCCCGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALESPGSR*TAPRRQ
Trigger: CTGGCGCCGGGGTGCTGTCCATCTACTACCTGGGGA...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAACCAGCTTCTTGCAGTaGGTGGCCCAGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALETSFLQ*VAQALG
Trigger: ACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGT...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CAGGGACACAGACCAGTGAGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGAGGGCTCTTCCCCAGTaGTCTCCGACTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: QGHRPVREASPARSPWQLRALPQ*SPTLVL
Trigger: GAGGACAAGAGTCGGAGACCACTGGGGAAGAGCCCT...CAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCTCACTGGTCTGTGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp AGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGTGCACACCCCGGGCCACGTTGAACGGCTaGAACTTGTTGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SWGQLAVPGLGTGECTPRATLNG*NLLMAA
Trigger: TGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGC...CCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCGCCGGGCTGTGTGGGTaGCTGTGGTACCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPAAGLCG*LWYQPT
Trigger: GGTGGGCTGGTACCACAGCCACCCACACAGCCCGGC...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GACGTAGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGCAGCGCCGGGCTGTGTaGGTGGCTGTGGTACCAGCC +
Preference number: 4 (lower is better)
Translates to: DVGHLHIHGDAIVTGPLLQRRAV*VAVVPA
Trigger: GGCTGGTACCACAGCCACCCACACAGCCCGGCGCTG...CAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGATGTCCTGCAGAGATaGCAGCGCCGGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALEDVLQR*QRRAVW
Trigger: CCACACAGCCCGGCGCTGCCATCTCTGCAGGACATC...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGGATGTCCTGCAGAGATaGCAGCGCCGGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWDVLQR*QRRAVW
Trigger: CCACACAGCCCGGCGCTGCCATCTCTGCAGGACATC...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAACAGGCTCTGGTCCTTaGGCGTCCTGCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALETGSGP*ASCWPR
Trigger: CCTTGGCCAGCAGGACGCCCAAGGACCAGAGCCTGT...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp AGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGTGGCAGTGCCCGGGCTaGGAACGGGAGAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: RPSPHPWGCHSHWAFAGRWQCPG*ERESAH
Trigger: GTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCA...CCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGTCTGGCCTTTGTACTTaGCAGAGGCCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKSGLCT*QRPSHS
Trigger: GCTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGA...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGACCTGTTCCAGGACGTaGCACAGGCTCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKTCSRT*HRLWSL
Trigger: CAAGGACCAGAGCCTGTGTCACGTCCTGGAACAGGT...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCCTCAGCTCCCCTGCTTaGGGACGCCGCACACCTGTT +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPLSSPA*GRRTPV
Trigger: AACAGGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAG...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TCACGAGGTCAGGGGAACCCTTGTAGAACTCCACCAGCAGCATCATCTCGTGAAGGCGTGTGCAGCTGGTaGAGCCGGAGCCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRGQGNPCRTPPAASSREGVCSW*SRSQVA
Trigger: GGCCACCTGGCTCCGGCTGCACCAGCTGCACACGCC...TTCACGAGATGATGCTGCTGGTGGAGTTCTACAAGGGTTCCCCTGACCTCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCGGCGTGTGCAGCTGGTaGAGCCGGAGCCAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGAGVCSW*SRSQVA
Trigger: GGCCACCTGGCTCCGGCTGCACCAGCTGCACACGCC...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGCCGGAACCCGGATCTTaGTGTCCACCCGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALPEPGS*CPPASL
Trigger: CAGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGG...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCGGCAGCTGCAGTCTCTaGGTCCCCGAGCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGAGSCSL*VPEPAP
Trigger: CGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCC...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000599840.6
CDS-3UTR GCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGGCAGCTGCAGTCTCTaGGTCCCCGAGCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPGSCSL*VPEPAP
Trigger: CGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCC...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGACTCGGGGCCTGGGTTaGCAGAATAGTAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKTRGLG*QNSKGS
Trigger: GCTCCCCTTACTATTCTGGCAACCCAGGCCCCGAGT...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCCCACATCCATGGGGATaGCATAGTCACTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGPHPWG*HSHWAF
Trigger: AAAGGCCCAGTGACTATGGCATCCCCATGGATGTGG...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp CCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGTGCACCCACATCCATGGGGATaGCATAGTCACTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PWQLGTIGSARAGNGRVHPHPWG*HSHWAF
Trigger: AAAGGCCCAGTGACTATGGCATCCCCATGGATGTGG...GTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TCCAGGGTTCCTGGAGCCTCACGAGGTCAGGGGAACCCTTGTAGAACTCCACCAGCTTCTTGCAGTGGGTaGCCCAGGCGCTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: SRVPGASRGQGNPCRTPPASCSG*PRRWVS
Trigger: ACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGC...TGGTGGAGTTCTACAAGGGTTCCCCTGACCTCGTGAGGCTCCAGGAACCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp GGCTGGCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGAGCAGGCGTGTGCAGCTaGTGCAGCCGGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GWLLLPFLYYLSPSGPSRAGVCS*CSRSQV
Trigger: CACCTGGCTCCGGCTGCACCAGCTGCACACGCCTGC...TCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262966.12
CDS-3UTR CCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGTCTCATCAGCAGCCGTaGCAGGCGTGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWSHQQP*QACAAG
Trigger: ACCAGCTGCACACGCCTGCCACGGCTGCTGATGAGA...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCGCTTCCCTGGGGTTGTaGCCTCCGGGTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTASLGL*PPGGQA
Trigger: AGCCTGCCCACCCGGAGGCCACAACCCCAGGGAAGC...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGACTTCCACCAGGGTGTaGGGGTTCCTGGCCAAGTCG +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWTSTRV*GFLAKS
Trigger: CGACTTGGCCAGGAACCCCCACACCCTGGTGGAAGT...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAAGCACCGTCAGCATCTaGCTGTTGACGTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALESTVSI*LLTSQR
Trigger: CCGCTGGGACGTCAACAGCCAGATGCTGACGGTGCT...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCACAGGCTCTGGTCCTTaGGCGTCCTGCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPTGSGP*ASCWPR
Trigger: CCTTGGCCAGCAGGACGCCCAAGGACCAGAGCCTGT...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GCCTCACGAGGTCAGGGGAACCCTTGTAGAACTCCACCAGCAGCATCATCTCGTCCAGCCCGCAGCCCATaGCAGCTGGGGACAATTGGC +
Preference number: 4 (lower is better)
Translates to: ASRGQGNPCRTPPAASSRPARSP*QLGTIG
Trigger: GCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGG...ACGAGATGATGCTGCTGGTGGAGTTCTACAAGGGTTCCCCTGACCTCGTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCGGCCCAGGCGCTGGGTaGGTTGAAGGTCTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPGPGAG*VEGLPG
Trigger: ACCGGGCAGACCTTCAACTCACCCAGCGCCTGGGCC...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR TCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAACTCTTGTCCTCTGCTaGGACCCCTGCCAGAACGTC +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALETLVLC*DPCQNV
Trigger: GACGTTCTGGCAGGGGTCTCAGCAGAGGACAAGAGT...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTCGGGTGGGCAGGCTCTaGAGGGCTCTTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPRVGRL*RALPQW
Trigger: CCACTGGGGAAGAGCCCTTCAGAGCCTGCCCACCCG...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTCAGCTCCCCTGCTTaGGGACGCCGCACACCTGTT +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPALSSPA*GRRTPV
Trigger: AACAGGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAG...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGTGAGTTGAAGGTCTaGCCGGTCTCCTGCCACATG +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALEGELKV*PVSCHM
Trigger: CATGTGGCAGGAGACCGGGCAGACCTTCAACTCACC...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp GCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGCAGCTGCAGTCTCTaGGTCCCCGAGCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: AAASVSLLPEPIRTLKTTGSCSL*VPEPAP
Trigger: CGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCC...AGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262966.12
CDS-3UTR GCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGGCAGCTGCAGTCTCTaGGTCCCCGAGCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGGSCSL*VPEPAP
Trigger: CGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCC...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000599840.6
CDS-3UTR GCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGCTCTTCGATGGCAGCTaGAGTCTCTGCGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALLFDGS*SLCVPE
Trigger: CTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAG...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGACTCGGGGCCTGGGTTaGCAGAATAGTAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWTRGLG*QNSKGS
Trigger: GCTCCCCTTACTATTCTGGCAACCCAGGCCCCGAGT...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGCATGATCCTTCCGTCTaGCTGCAGGTCGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWHDPSV*LQVAQE
Trigger: TTCCTGGGCGACCTGCAGCCAGACGGAAGGATCATG...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGACACAGACTCTCATCAGCAGCCGTaGCAGGCGTGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PHPWGCHSHWAFAGRDTDSHQQP*QACAAG
Trigger: ACCAGCTGCACACGCCTGCCACGGCTGCTGATGAGA...GTCTGTGTCCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGTCTCATCAGCAGCCGTaGCAGGCGTGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALSHQQP*QACAAG
Trigger: ACCAGCTGCACACGCCTGCCACGGCTGCTGATGAGA...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTCTCATCAGCAGCCGTaGCAGGCGTGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPSHQQP*QACAAG
Trigger: ACCAGCTGCACACGCCTGCCACGGCTGCTGATGAGA...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCCCTCCTCCCCTTCACTaGCTGGGCTCTCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPPPPLH*LGSHQQ
Trigger: CTGCTGATGAGAGCCCAGCCAGTGAAGGGGAGGAGG...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAAGGGCTCTTCCCCAGTaGTCTCCGACTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LPEPIRTLKTTGAHPALERALPQ*SPTLVL
Trigger: GAGGACAAGAGTCGGAGACCACTGGGGAAGAGCCCT...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACGTCCACCCGCTTCCCTaGGGTTGTGGCCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SVSLLPEPIRTLKTTGAHVHPLP*GCGLRV
Trigger: CACCCGGAGGCCACAACCCCAGGGAAGCGGGTGGAC...GTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGTCCACCCGCTTCCCTaGGGTTGTGGCCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPVHPLP*GCGLRV
Trigger: CACCCGGAGGCCACAACCCCAGGGAAGCGGGTGGAC...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCGTCCACCCGCTTCCCTaGGGTTGTGGCCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGAVHPLP*GCGLRV
Trigger: CACCCGGAGGCCACAACCCCAGGGAAGCGGGTGGAC...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGGGTGTGGGGGTTCCTaGCCAAGTCGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPGCGGS*PSRGCP
Trigger: TGGGCAGCCGCGACTTGGCCAGGAACCCCCACACCC...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCACTTCCACCAGGGTGTaGGGGTTCCTGGCCAAGTCG +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPTSTRV*GFLAKS
Trigger: CGACTTGGCCAGGAACCCCCACACCCTGGTGGAAGT...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGTGTGGGTGGCTGTaGTACCAGCCCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPALCGWL*YQPTRD
Trigger: GTCCCTGGTGGGCTGGTACCACAGCCACCCACACAG...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CCTCACGAGGTCAGGGGAACCCTTGTAGAACTCCACCAGCAGCATCATCTCGTGCTGTGTGGGTGGCTGTaGTACCAGCCCACCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PHEVRGTLVELHQQHHLVLCGWL*YQPTRD
Trigger: GTCCCTGGTGGGCTGGTACCACAGCCACCCACACAG...CACGAGATGATGCTGCTGGTGGAGTTCTACAAGGGTTCCCCTGACCTCGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCGGGCTGTGTGGGTaGCTGTGGTACCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPAGLCG*LWYQPT
Trigger: GGTGGGCTGGTACCACAGCCACCCACACAGCCCGGC...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGGCCGGGCTGTGTGGGTaGCTGTGGTACCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLAGLCG*LWYQPT
Trigger: GGTGGGCTGGTACCACAGCCACCCACACAGCCCGGC...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCGCCGGGCTGTGTGGGTaGCTGTGGTACCAGCCCACC +
Preference number: 4 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPAGLCG*LWYQPT
Trigger: GGTGGGCTGGTACCACAGCCACCCACACAGCCCGGC...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTCAGCGCCGGGCTGTGTaGGTGGCTGTGGTACCAGCC +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPQRRAV*VAVVPA
Trigger: GGCTGGTACCACAGCCACCCACACAGCCCGGCGCTG...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCACAGGCTCTGGTCCTTaGGCGTCCTGCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPATGSGP*ASCWPR
Trigger: CCTTGGCCAGCAGGACGCCCAAGGACCAGAGCCTGT...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TGGCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAAGGCCCAGGCGCTGGGTaGGTTGAAGGTCTGCCCGGT +
Preference number: 4 (lower is better)
Translates to: WLLLPFLYYLSPSGPSRQGPGAG*VEGLPG
Trigger: ACCGGGCAGACCTTCAACTCACCCAGCGCCTGGGCC...TTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262966.12
CDS-3UTR TCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTCTGGCCTTTGTACTTaGCAGAGGCCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPSGLCT*QRPSHS
Trigger: GCTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGA...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGACTCTTGTCCTCTGCTaGGACCCCTGCCAGAACGTC +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALTLVLC*DPCQNV
Trigger: GACGTTCTGGCAGGGGTCTCAGCAGAGGACAAGAGT...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTCACTCCGTGTCAGGTaGCTGTGGAAGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPSLRVR*LWKSSR
Trigger: CCTGCTGGACTTCCACAGTCACCTGACACGGAGTGA...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCGACAAGGGAAGGCTCTaGGCACCGTCAGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPADKGRL*APSASG
Trigger: GCCAGATGCTGACGGTGCTCAGAGCCTTCCCTTGTC...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGATCCTTCCGTCTGGCTaGAGGTCGCCCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALILPSG*RSPRNF
Trigger: GAAGTTCCTGGGCGACCTGCAGCCAGACGGAAGGAT...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGACGCGGCTGCCCAGCATaGAGTAGCGGACCGGAACCC +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGRGCPA*SSGPEP
Trigger: GGGTTCCGGTCCGCTACTGCATGCTGGGCAGCCGCG...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTCTTCGATGGCAGCTaGAGTCTCTGCGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPALFDGS*SLCVPE
Trigger: CTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAG...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCAAGGCTCAGCTCCCCTaGTTGAGGACGCCGCACACC +
Preference number: 4 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTKAQLP*LRTPHT
Trigger: GGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAGCCTT...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR GCA 90 bp AAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATACCCCGGCTCAGCTCTaGACCGGGATCGGCACCTCG +
Preference number: 4 (lower is better)
Translates to: KDVIGQEAVLDVGHLHIHTPAQL*TGIGTS
Trigger: CGAGGTGCCGATCCCGGTGCAGAGCTGAGCCGGGGT...ATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp TCACGAGGTCAGGGGAACCCTTGTAGAACTCCACCAGCAGCATCATCTCGTGAAGGGGACAATTGGCAGTaGCCGGGCTGGGAACGGGAG +
Preference number: 4 (lower is better)
Translates to: SRGQGNPCRTPPAASSREGDNWQ*PGWERE
Trigger: CTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCC...TTCACGAGATGATGCTGCTGGTGGAGTTCTACAAGGGTTCCCCTGACCTCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TGGCTGGCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGTCCCCAGGTAGTAGATaGACAGCACCCCGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: WLAAASVSLLPEPIRTLKSPGSR*TAPRRQ
Trigger: CTGGCGCCGGGGTGCTGTCCATCTACTACCTGGGGA...CTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGCCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262966.12
CDS-3UTR CCA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCGCTTCTTGCAGTGGGTaGCCCAGGCGCTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTASCSG*PRRWVS
Trigger: ACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGC...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp TCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATGGGGATGCCATAGTACCAGCTTCTTGCAGTaGGTGGCCCAGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SGSCPGRRPSPHPWGCHSTSFLQ*VAQALG
Trigger: ACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGT...ACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGGCAGGCGTGTGCAGCTaGTGCAGCCGGAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLEAGVCS*CSRSQV
Trigger: CACCTGGCTCCGGCTGCACCAGCTGCACACGCCTGC...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCAGGGCTCTTCCCCAGTaGTCTCCGACTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPRALPQ*SPTLVL
Trigger: GAGGACAAGAGTCGGAGACCACTGGGGAAGAGCCCT...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGTTGTGGCCTCCGGGTaGGCAGGCTCTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPVVASG*AGSEGL
Trigger: GAGCCCTTCAGAGCCTGCCCACCCGGAGGCCACAAC...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGGTTGTGGCCTCCGGGTaGGCAGGCTCTGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLVVASG*AGSEGL
Trigger: GAGCCCTTCAGAGCCTGCCCACCCGGAGGCCACAAC...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGGGTGTGGGGGTTCCTaGCCAAGTCGCGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLLPFLYYLSPSGPSRQLGCGGS*PSRGCP
Trigger: TGGGCAGCCGCGACTTGGCCAGGAACCCCCACACCC...CAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000359935.8
CDS-3UTR CCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCAGCACCGTCAGCATCTaGCTGTTGACGTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPASTVSI*LLTSQR
Trigger: CCGCTGGGACGTCAACAGCCAGATGCTGACGGTGCT...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGCTTGGACTCGGGGCCTaGGTTGCCAGAATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: GHLHIHGDAIVTGPLLAGLGLGA*VARIVR
Trigger: CCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAG...CCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWRKVRS*TRGLGC
Trigger: GCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCT...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGGATGCCATAGTCACTaGGCCTTTGCTCGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALGCHSH*AFAREE
Trigger: CTCCTCCCGAGCAAAGGCCCAGTGACTATGGCATCC...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGCCATCTCCACATCCATaGGGATGCCATAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKPSPHP*GCHSHW
Trigger: CCAGTGACTATGGCATCCCCATGGATGTGGAGATGG...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp CCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGACACAGACGGATGCCATAGTCACTaGGCCTTTGCTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PHPWGCHSHWAFAGRDTDGCHSH*AFAGRD
Trigger: GTCCCTGCCAGCAAAGGCCCAGTGACTATGGCATCC...GTCTGTGTCCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCACTCTTGTCCTCTGCTaGGACCCCTGCCAGAACGTC +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPATLVLC*DPCQNV
Trigger: GACGTTCTGGCAGGGGTCTCAGCAGAGGACAAGAGT...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCACCTGTTCCAGGACGTaGCACAGGCTCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPATCSRT*HRLWSL
Trigger: CAAGGACCAGAGCCTGTGTCACGTCCTGGAACAGGT...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCTCAGCTCCCCTGCTTaGGGACGCCGCACACCTGTT +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGALSSPA*GRRTPV
Trigger: AACAGGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAG...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR TCA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCCTCAGCTCCCCTGCTTaGGGACGCCGCACACCTGTT +
Preference number: 4 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPLSSPA*GRRTPV
Trigger: AACAGGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAG...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR TCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGAGCAGCATCATCTCGTaGAGGATGTCATTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKSSIIS*RMSLVR
Trigger: CCTGACCAATGACATCCTTCACGAGATGATGCTGCT...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp GTAGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAATCCTTCCGTCTGGCTaGAGGTCGCCCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: VGHLHIHGDAIVTGPLLAILPSG*RSPRNF
Trigger: GAAGTTCCTGGGCGACCTGCAGCCAGACGGAAGGAT...TGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCGGTTCACCAGCTTCTTaGAGTGGGTGGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGAGSPAS*SGWPRR
Trigger: GCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACC...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp TCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCGGAACCCGGATCTTaGTGTCCACCCGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SVSLLPEPIRTLKTTGAHPEPGS*CPPASL
Trigger: CAGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGG...GTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCGGAACCCGGATCTTaGTGTCCACCCGCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLPEPGS*CPPASL
Trigger: CAGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGG...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TCACGAGGTCAGGGGAACCCTTGTAGAACTCCACCAGCAGCATCATCTCGTGAATGGCCAAGTCGCGGCTaGCCAGCATGCAGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: SRGQGNPCRTPPAASSREWPSRG*PACSSG
Trigger: TCCGCTACTGCATGCTGGGCAGCCGCGACTTGGCCA...TTCACGAGATGATGCTGCTGGTGGAGTTCTACAAGGGTTCCCCTGACCTCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGTGGCCAAGTCGCGGCTaGCCAGCATGCAGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLWPSRG*PACSSG
Trigger: TCCGCTACTGCATGCTGGGCAGCCGCGACTTGGCCA...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCTGGCCAAGTCGCGGCTaGCCAGCATGCAGTAGCGGA +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGAWPSRG*PACSSG
Trigger: TCCGCTACTGCATGCTGGGCAGCCGCGACTTGGCCA...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGTGTGCGTCGATGTCCTaGAGAGATGGCAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLCASMS*RDGSAG
Trigger: CCCGGCGCTGCCATCTCTGCAGGACATCGACGCACA...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTTGTGCGTCGATGTCCTaGAGAGATGGCAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPCASMS*RDGSAG
Trigger: CCCGGCGCTGCCATCTCTGCAGGACATCGACGCACA...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGCTGGTAGTCCATCTGTaGGTCGATGTCCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWLVVHL*VDVLQR
Trigger: TCTCTGCAGGACATCGACGCACAGATGGACTACCAG...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCACTCGGGGCCTGGGTTaGCAGAATAGTAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPATRGLG*QNSKGS
Trigger: GCTCCCCTTACTATTCTGGCAACCCAGGCCCCGAGT...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCAAGGCTCAGCTCCCCTaGTTGAGGACGCCGCACACC +
Preference number: 4 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPKAQLP*LRTPHT
Trigger: GGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAGCCTT...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR GCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTAAGGCTCAGCTCCCCTaGTTGAGGACGCCGCACACC +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPKAQLP*LRTPHT
Trigger: GGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAGCCTT...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTTCCCCAGGTAGTAGATaGACAGCACCCCGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPSPGSR*TAPRRQ
Trigger: CTGGCGCCGGGGTGCTGTCCATCTACTACCTGGGGA...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGGCTTCTTGCAGTGGGTaGCCCAGGCGCTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLASCSG*PRRWVS
Trigger: ACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGC...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTACCAGCTTCTTGCAGTaGGTGGCCCAGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPTSFLQ*VAQALG
Trigger: ACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGT...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGACCAGCTTCTTGCAGTaGGTGGCCCAGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLTSFLQ*VAQALG
Trigger: ACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGT...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGCACAGCCCGACTTCTTaGCAGGGTTCACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALHSPTS*QGSPAS
Trigger: AGAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTG...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGTGCACACCCTACTTGTCCAGTTTCTaGCCTTTGTACTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: GSWGQLAVPGLGTGECTPYLSSF*PLYLTE
Trigger: CTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTA...GGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TGGCTGGCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACTTCCACCAGGGTGTaGGGGTTCCTGGCCAAGTCG +
Preference number: 4 (lower is better)
Translates to: WLAAASVSLLPEPIRTLKTSTRV*GFLAKS
Trigger: CGACTTGGCCAGGAACCCCCACACCCTGGTGGAAGT...CTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262966.12
CDS-3UTR CCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCCTTGGACTCGGGGCCTaGGTTGCCAGAATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPLGLGA*VARIVR
Trigger: CCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAG...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPRKVRS*TRGLGC
Trigger: GCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCT...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTTGGCTCCAGGGTTCCTaGAGCCTCACGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPWLQGS*SLTRSG
Trigger: CCCTGACCTCGTGAGGCTCCAGGAACCCTGGAGCCA...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCTGGCTCCAGGGTTCCTaGAGCCTCACGAGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPWLQGS*SLTRSG
Trigger: CCCTGACCTCGTGAGGCTCCAGGAACCCTGGAGCCA...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR CCA 90 bp TCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACACAGGCTCTGGTCCTTaGGCGTCCTGCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SVSLLPEPIRTLKTTGAHTGSGP*ASCWPR
Trigger: CCTTGGCCAGCAGGACGCCCAAGGACCAGAGCCTGT...GTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR CCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCACAGGCTCTGGTCCTTaGGCGTCCTGCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGATGSGP*ASCWPR
Trigger: CCTTGGCCAGCAGGACGCCCAAGGACCAGAGCCTGT...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR TCA 90 bp TCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCGGTCTCCTGCCACATaGTCCTTCCGTCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVSLLPEPIRTLKTTGAHRSPAT*SFRLAA
Trigger: TGCAGCCAGACGGAAGGATCATGTGGCAGGAGACCG...GTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR TCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCGGTCTCCTGCCACATaGTCCTTCCGTCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGARSPAT*SFRLAA
Trigger: TGCAGCCAGACGGAAGGATCATGTGGCAGGAGACCG...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR TCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCGACAAGGGAAGGCTCTaGGCACCGTCAGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGADKGRL*APSASG
Trigger: GCCAGATGCTGACGGTGCTCAGAGCCTTCCCTTGTC...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000599840.6
CDS-3UTR TCA 90 bp TGGCTGGCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: WLAAASVSLLPEPIRTLKHHPER*DLGLGA
Trigger: GGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATG...CTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262966.12
CDS-3UTR GCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTCTCTTCGATGGCAGCTaGAGTCTCTGCGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPLFDGS*SLCVPE
Trigger: CTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAG...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp GCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTTGTGCGTCGATGTCCTaGAGAGATGGCAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: AAASVSLLPEPIRTLKTTCASMS*RDGSAG
Trigger: CCCGGCGCTGCCATCTCTGCAGGACATCGACGCACA...AGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000359935.8
CDS-3UTR GCA 90 bp ACTCCACCAGCAGCATCATCTCGTGAAGGATGTCATTGGTCAGGAAGCTGTCCTTGTGCGTCGATGTCCTaGAGAGATGGCAGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: TPPAASSREGCHWSGSCPCASMS*RDGSAG
Trigger: CCCGGCGCTGCCATCTCTGCAGGACATCGACGCACA...AGGACAGCTTCCTGACCAATGACATCCTTCACGAGATGATGCTGCTGGTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp AAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATTCCCCAGGTAGTAGATaGACAGCACCCCGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: KDVIGQEAVLDVGHLHIHSPGSR*TAPRRQ
Trigger: CTGGCGCCGGGGTGCTGTCCATCTACTACCTGGGGA...ATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATGGGGATGCCATAGTCATGATCCTTCCGTCTaGCTGCAGGTCGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGSCPGRRPSPHPWGCHSHDPSV*LQVAQE
Trigger: TTCCTGGGCGACCTGCAGCCAGACGGAAGGATCATG...ACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCTTCTTGCAGTGGGTaGCCCAGGCGCTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGASCSG*PRRWVS
Trigger: ACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGC...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGGCTTCTTGCAGTGGGTaGCCCAGGCGCTGGGTGAGT +
Preference number: 4 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLEASCSG*PRRWVS
Trigger: ACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGC...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGTCTCATCAGCAGCCGTaGCAGGCGTGTGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLSHQQP*QACAAG
Trigger: ACCAGCTGCACACGCCTGCCACGGCTGCTGATGAGA...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTCCTCCTCCCCTTCACTaGCTGGGCTCTCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPPPPLH*LGSHQQ
Trigger: CTGCTGATGAGAGCCCAGCCAGTGAAGGGGAGGAGG...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACACTTCCACCAGGGTGTaGGGGTTCCTGGCCAAGTCG +
Preference number: 4 (lower is better)
Translates to: SVSLLPEPIRTLKTTGAHTSTRV*GFLAKS
Trigger: CGACTTGGCCAGGAACCCCCACACCCTGGTGGAAGT...GTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGCCACGTTGAACGGCTaGAACTTGTTGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALATLNG*NLLMAA
Trigger: TGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGC...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TCACGAGGTCAGGGGAACCCTTGTAGAACTCCACCAGCAGCATCATCTCGTGAAAGCACCGTCAGCATCTaGCTGTTGACGTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SRGQGNPCRTPPAASSRESTVSI*LLTSQR
Trigger: CCGCTGGGACGTCAACAGCCAGATGCTGACGGTGCT...TTCACGAGATGATGCTGCTGGTGGAGTTCTACAAGGGTTCCCCTGACCTCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGGATGTCCTGCAGAGATaGCAGCGCCGGGCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLEDVLQR*QRRAVW
Trigger: CCACACAGCCCGGCGCTGCCATCTCTGCAGGACATC...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGCGTGAAGGATGTCATTaGTCAGGAAGCTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWREGCH*SGSCPG
Trigger: TCCAGGACAGCTTCCTGACCAATGACATCCTTCACG...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359935.8
ENST00000599840.6
CDS-3UTR TCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGACTCTTGTCCTCTGCTaGGACCCCTGCCAGAACGTC +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLTLVLC*DPCQNV
Trigger: GACGTTCTGGCAGGGGTCTCAGCAGAGGACAAGAGT...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGTCACTCCGTGTCAGGTaGCTGTGGAAGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLSLRVR*LWKSSR
Trigger: CCTGCTGGACTTCCACAGTCACCTGACACGGAGTGA...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp CTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGACAAGGGAAGGCTCTaGGCACCGTCAGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: LLLPFLYYLSPSGPSRQLDKGRL*APSASG
Trigger: GCCAGATGCTGACGGTGCTCAGAGCCTTCCCTTGTC...CAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000594162.1
CDS-3UTR TCA 90 bp CAGGGGAACCCTTGTAGAACTCCACCAGCAGCATCATCTCGTGAAGGATGTCATGACAAGGGAAGGCTCTaGGCACCGTCAGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: QGNPCRTPPAASSREGCHDKGRL*APSASG
Trigger: GCCAGATGCTGACGGTGCTCAGAGCCTTCCCTTGTC...ATGACATCCTTCACGAGATGATGCTGCTGGTGGAGTTCTACAAGGGTTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR TCA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGGACAAGGGAAGGCTCTaGGCACCGTCAGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLEDKGRL*APSASG
Trigger: GCCAGATGCTGACGGTGCTCAGAGCCTTCCCTTGTC...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000599840.6
CDS-3UTR TCA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPHHPER*DLGLGA
Trigger: GGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATG...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR TCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPHHPER*DLGLGA
Trigger: GGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATG...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR TCA 90 bp TCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCC +
Preference number: 4 (lower is better)
Translates to: SVSLLPEPIRTLKTTGAHHHPER*DLGLGA
Trigger: GGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATG...GTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR TCA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGCGTTTCTTTATTACCTaGGCCCATCCGGACCCTCAA +
Preference number: 4 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALRFFIT*AHPDPQ
Trigger: TTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACG...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR TCA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCAGCAGCATCATCTCGTaGAGGATGTCATTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPSSIIS*RMSLVR
Trigger: CCTGACCAATGACATCCTTCACGAGATGATGCTGCT...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGATCCTTCCGTCTGGCTaGAGGTCGCCCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLILPSG*RSPRNF
Trigger: GAAGTTCCTGGGCGACCTGCAGCCAGACGGAAGGAT...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGGGTGAGTTGAAGGTCTaGCCGGTCTCCTGCCACATG +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLGELKV*PVSCHM
Trigger: CATGTGGCAGGAGACCGGGCAGACCTTCAACTCACC...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR GCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGACTCTTCGATGGCAGCTaGAGTCTCTGCGTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGLFDGS*SLCVPE
Trigger: CTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAG...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000599840.6
CDS-3UTR GCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCACTCGGGGCCTGGGTTaGCAGAATAGTAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGATRGLG*QNSKGS
Trigger: GCTCCCCTTACTATTCTGGCAACCCAGGCCCCGAGT...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp GTGAAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCACTCGGGGCCTGGGTTaGCAGAATAGTAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VKDVIGQEAVLDVGHLHITRGLG*QNSKGS
Trigger: GCTCCCCTTACTATTCTGGCAACCCAGGCCCCGAGT...GATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTCATGATCCTTCCGTCTaGCTGCAGGTCGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPHDPSV*LQVAQE
Trigger: TTCCTGGGCGACCTGCAGCCAGACGGAAGGATCATG...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCATGATCCTTCCGTCTaGCTGCAGGTCGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SVSLLPEPIRTLKTTGAHHDPSV*LQVAQE
Trigger: TTCCTGGGCGACCTGCAGCCAGACGGAAGGATCATG...GTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCACAGCCCGACTTCTTaGCAGGGTTCACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTHSPTS*QGSPAS
Trigger: AGAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTG...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp AAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATCCTCCTCCCCTTCACTaGCTGGGCTCTCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: KDVIGQEAVLDVGHLHIHPPPLH*LGSHQQ
Trigger: CTGCTGATGAGAGCCCAGCCAGTGAAGGGGAGGAGG...ATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGACCTCCTCCCCTTCACTaGCTGGGCTCTCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGPPPLH*LGSHQQ
Trigger: CTGCTGATGAGAGCCCAGCCAGTGAAGGGGAGGAGG...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCAGGGCTCTTCCCCAGTaGTCTCCGACTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGARALPQ*SPTLVL
Trigger: GAGGACAAGAGTCGGAGACCACTGGGGAAGAGCCCT...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCGCCACGTTGAACGGCTaGAACTTGTTGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPAATLNG*NLLMAA
Trigger: TGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGC...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGAGCACCGTCAGCATCTaGCTGTTGACGTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LLLPFLYYLSPSGPSRQLSTVSI*LLTSQR
Trigger: CCGCTGGGACGTCAACAGCCAGATGCTGACGGTGCT...CAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000594162.1
CDS-3UTR CCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAAGCACCGTCAGCATCTaGCTGTTGACGTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGSTVSI*LLTSQR
Trigger: CCGCTGGGACGTCAACAGCCAGATGCTGACGGTGCT...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000594162.1
ENST00000599840.6
CDS-3UTR TCA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGTCACTCCGTGTCAGGTaGCTGTGGAAGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLESLRVR*LWKSSR
Trigger: CCTGCTGGACTTCCACAGTCACCTGACACGGAGTGA...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000599840.6
CDS-3UTR TCA 90 bp CTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGACCTGTTCCAGGACGTaGCACAGGCTCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LLLPFLYYLSPSGPSRQLTCSRT*HRLWSL
Trigger: CAAGGACCAGAGCCTGTGTCACGTCCTGGAACAGGT...CAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
CDS-3UTR TCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAACCTGTTCCAGGACGTaGCACAGGCTCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGTCSRT*HRLWSL
Trigger: CAAGGACCAGAGCCTGTGTCACGTCCTGGAACAGGT...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR TCA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCGTTTCTTTATTACCTaGGCCCATCCGGACCCTCAA +
Preference number: 4 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPARFFIT*AHPDPQ
Trigger: TTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACG...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR TCA 90 bp GGACGTAGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTAGCAGCATCATCTCGTaGAGGATGTCATTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRRPSPHPWGCHSHWAFASSIIS*RMSLVR
Trigger: CCTGACCAATGACATCCTTCACGAGATGATGCTGCT...AGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAATCCTTCCGTCTGGCTaGAGGTCGCCCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGILPSG*RSPRNF
Trigger: GAAGTTCCTGGGCGACCTGCAGCCAGACGGAAGGAT...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp GCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGTCTGCCCGGTCTCCTaGCACATGATCCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: AAASVSLLPEPIRTLKTTVCPVS*HMILPS
Trigger: AGACGGAAGGATCATGTGGCAGGAGACCGGGCAGAC...AGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000359935.8
CDS-3UTR GCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGGTGAGTTGAAGGTCTaGCCGGTCTCCTGCCACATG +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGGELKV*PVSCHM
Trigger: CATGTGGCAGGAGACCGGGCAGACCTTCAACTCACC...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp GGCTGGCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACTGGTAGTCCATCTGTaGGTCGATGTCCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GWLLLPFLYYLSPSGPSRLVVHL*VDVLQR
Trigger: TCTCTGCAGGACATCGACGCACAGATGGACTACCAG...TCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262966.12
CDS-3UTR GCA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCCACATCCATGGGGATaGCATAGTCACTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTPHPWG*HSHWAF
Trigger: AAAGGCCCAGTGACTATGGCATCCCCATGGATGTGG...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGACATGATCCTTCCGTCTaGCTGCAGGTCGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGHDPSV*LQVAQE
Trigger: TTCCTGGGCGACCTGCAGCCAGACGGAAGGATCATG...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCACAGCCCGACTTCTTaGCAGGGTTCACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLHSPTS*QGSPAS
Trigger: AGAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTG...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GCAGCATCATCTCGTGAAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCACAGCCCGACTTCTTaGCAGGGTTCACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AASSREGCHWSGSCPGRRHSPTS*QGSPAS
Trigger: AGAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTG...CCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTTCACGAGATGATGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGTACTTGTCCAGTTTCTaGCCTTTGTACTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKYLSSF*PLYLTE
Trigger: CTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTA...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCTTGGACTCGGGGCCTaGGTTGCCAGAATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLLGLGA*VARIVR
Trigger: CCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAG...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCCTTGGACTCGGGGCCTaGGTTGCCAGAATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPLGLGA*VARIVR
Trigger: CCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAG...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPRKVRS*TRGLGC
Trigger: GCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCT...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLRKVRS*TRGLGC
Trigger: GCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCT...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGGATGCCATAGTCACTaGGCCTTTGCTCGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGGCHSH*AFAREE
Trigger: CTCCTCCCGAGCAAAGGCCCAGTGACTATGGCATCC...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359935.8
ENST00000599840.6
CDS-3UTR GCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCTGGTAGTCCATCTGTaGGTCGATGTCCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGALVVHL*VDVLQR
Trigger: TCTCTGCAGGACATCGACGCACAGATGGACTACCAG...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCGCCACGTTGAACGGCTaGAACTTGTTGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPATLNG*NLLMAA
Trigger: TGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGC...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGGCCACGTTGAACGGCTaGAACTTGTTGATGGCTGCA +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLATLNG*NLLMAA
Trigger: TGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGC...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CCA 90 bp GCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTCTTGGACTCGGGGCCTaGGTTGCCAGAATAGTAAGG +
Preference number: 4 (lower is better)
Translates to: AAASVSLLPEPIRTLKTTLGLGA*VARIVR
Trigger: CCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAG...AGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000359935.8
CDS-3UTR CCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCCATCTCCACATCCATaGGGATGCCATAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGAPSPHP*GCHSHW
Trigger: CCAGTGACTATGGCATCCCCATGGATGTGGAGATGG...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGGCATCTCCTCTTCGATaGCAGCTGCAGTCTCTGCGT +
Preference number: 4 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLEASPLR*QLQSLR
Trigger: ACGCAGAGACTGCAGCTGCCATCGAAGAGGAGATGC...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594162.1
CDS-3UTR TCA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCGTTTCTTTATTACCTaGGCCCATCCGGACCCTCAA +
Preference number: 4 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGARFFIT*AHPDPQ
Trigger: TTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACG...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR GCA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGACTGGTAGTCCATCTGTaGGTCGATGTCCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGLVVHL*VDVLQR
Trigger: TCTCTGCAGGACATCGACGCACAGATGGACTACCAG...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp AAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATCCATCTCCACATCCATaGGGATGCCATAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: KDVIGQEAVLDVGHLHIHPSPHP*GCHSHW
Trigger: CCAGTGACTATGGCATCCCCATGGATGTGGAGATGG...ATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCGTGAAGGATGTCATTaGTCAGGAAGCTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLREGCH*SGSCPG
Trigger: TCCAGGACAGCTTCCTGACCAATGACATCCTTCACG...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp GCAGCATCATCTCGTGAAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCGTGAAGGATGTCATTaGTCAGGAAGCTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AASSREGCHWSGSCPGRRREGCH*SGSCPG
Trigger: TCCAGGACAGCTTCCTGACCAATGACATCCTTCACG...CCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTTCACGAGATGATGCTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR GCA 90 bp TGTAGAACTCCACCAGCAGCATCATCTCGTGAAGGATGTCATTGGTCAGGAAGCCTGGTAGTCCATCTGTaGGTCGATGTCCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CRTPPAASSREGCHWSGSLVVHL*VDVLQR
Trigger: TCTCTGCAGGACATCGACGCACAGATGGACTACCAG...GCTTCCTGACCAATGACATCCTTCACGAGATGATGCTGCTGGTGGAGTTCTACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CCA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCTACTTGTCCAGTTTCTaGCCTTTGTACTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTYLSSF*PLYLTE
Trigger: CTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTA...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CCA 90 bp CTGGCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACATACTTGTCCAGTTTCTaGCCTTTGTACTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: LAAASVSLLPEPIRTLKTYLSSF*PLYLTE
Trigger: CTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTA...TGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262966.12
CDS-3UTR CCA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCTACTTGTCCAGTTTCTaGCCTTTGTACTTGACAGAG +
Preference number: 4 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPYLSSF*PLYLTE
Trigger: CTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTA...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS GCA 90 bp GGCAGCTGGGGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGTaGACACCCCGGCTCAGCTCTGCACCGGGATCGGCACCTCGGGAG +
Preference number: 5 (lower is better)
Translates to: GSWGQLAVPGLGTGE*TPRLSSAPGSAPRE
Trigger: CTCCCGAGGTGCCGATCCCGGTGCAGAGCTGAGCCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS GCA 90 bp AGTCGCGGCTGCCCAGCATGCAGTAGCGGACCGGAACCCGGATCTTaGTGTCCACCCGCTTCCCTGGGGTTGTGGCCTCCGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SRGCPACSSGPEPGS*CPPASLGLWPPGGQ
Trigger: CTGCCCACCCGGAGGCCACAACCCCAGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGGTCCGCTACTGCATGCTGGGCAGCCGCGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
ENST00000601877.1
CDS GCA 90 bp AGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTaGCCGGGCTGGGAACGGGAGAGTGCACACCCCGGCTCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SLTSPQPMAAGDNWQ*PGWERESAHPGSAL
Trigger: CAGAGCTGAGCCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS CCA 90 bp AGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTaGGAACGGGAGAGTGCACACCCCGGCTCAGCTCTGCACCGGGAT +
Preference number: 5 (lower is better)
Translates to: SPQPMAAGDNWQCPG*ERESAHPGSALHRD
Trigger: ATCCCGGTGCAGAGCTGAGCCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp AGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCCAGGCGCTGGGTGAGTaGAAGGTCTGCCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SLTSPQPMAAGDNWQCPGQALGE*KVCPVS
Trigger: GGAGACCGGGCAGACCTTCAACTCACCCAGCGCCTG...GCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp AGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTGGCAGTGCCCCCGCTTCCCTGGGGTaGTGGCCTCCGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: REASPARSPWQLGTIGSAPASLG*WPPGGQ
Trigger: CTGCCCACCCGGAGGCCACAACCCCAGGGAAGCGGG...GGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS CCA 90 bp TGTGCGTCGATGTCCTGCAGAGATGGCAGCGCCGGGCTGTGTGGGTaGCTGTGGTACCAGCCCACCAGGGACAGGCCCCGCAGGAACAGG +
Preference number: 5 (lower is better)
Translates to: CASMSCRDGSAGLCG*LWYQPTRDRPRRNR
Trigger: CCTGTTCCTGCGGGGCCTGTCCCTGGTGGGCTGGTACCACAGCCACCCACACAGCCCGGCGCTGCCATCTCTGCAGGACATCGACGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000599840.6
CDS CCA 90 bp GAGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTGGGGACAATTaGCAGTGCCCGGGCTGGGAACGGGAGAGTGCACACCCCGGCTCA +
Preference number: 5 (lower is better)
Translates to: ERSLTSPQPMAAGDN*QCPGWERESAHPGS
Trigger: TGAGCCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS CCA 90 bp CAGCCGCAGCTGGTAGTCCATCTGTGCGTCGATGTCCTGCAGAGATaGCAGCGCCGGGCTGTGTGGGTGGCTGTGGTACCAGCCCACCAG +
Preference number: 5 (lower is better)
Translates to: QPQLVVHLCVDVLQR*QRRAVWVAVVPAHQ
Trigger: CTGGTGGGCTGGTACCACAGCCACCCACACAGCCCGGCGCTGCCATCTCTGCAGGACATCGACGCACAGATGGACTACCAGCTGCGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCACCGGAACCCGGATCTaGCTGTCCACCCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGTGTRI*LSTRFP
Trigger: AGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGGT...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS TCA 90 bp GCTCAGCTCCCCTGCTTGAGGACGCCGCACACCTGTTCCAGGACGTaGCACAGGCTCTGGTCCTTGGGCGTCCTGCTGGCCAAGGAGATC +
Preference number: 5 (lower is better)
Translates to: AQLPCLRTPHTCSRT*HRLWSLGVLLAKEI
Trigger: GATCTCCTTGGCCAGCAGGACGCCCAAGGACCAGAGCCTGTGTCACGTCCTGGAACAGGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS GCA 90 bp TGGGTGGCCCAGGCGCTGGGTGAGTTGAAGGTCTGCCCGGTCTCCTaGCACATGATCCTTCCGTCTGGCTGCAGGTCGCCCAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: WVAQALGELKVCPVS*HMILPSGCRSPRNF
Trigger: GAAGTTCCTGGGCGACCTGCAGCCAGACGGAAGGATCATGTGGCAGGAGACCGGGCAGACCTTCAACTCACCCAGCGCCTGGGCCACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CCA 90 bp CAGCCACAGCCCGACTTCTTGGCAGGGTTCACCAGCTTCTTGCAGTaGGTGGCCCAGGCGCTGGGTGAGTTGAAGGTCTGCCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QPQPDFLAGFTSFLQ*VAQALGELKVCPVS
Trigger: GGAGACCGGGCAGACCTTCAACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGGGTTCACCAGCTTCTaGCAGTGGGTGGCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKGFTSF*QWVAQA
Trigger: CGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCC...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCCCGCTTCCCTGGGGTaGTGGCCTCCGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPAPASLG*WPPGGQ
Trigger: CTGCCCACCCGGAGGCCACAACCCCAGGGAAGCGGG...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAACAGGGCTGGAAGCCATaGCTGGAGCCCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LPEPIRTLKTTGAHPALEQGWKP*LEPCSR
Trigger: GCGGCTGCAGGGCTCCAGCAATGGCTTCCAGCCCTG...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGCAGGGCTGGAAGCCATaGCTGGAGCCCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWQGWKP*LEPCSR
Trigger: GCGGCTGCAGGGCTCCAGCAATGGCTTCCAGCCCTG...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS TCA 90 bp GGCAGGGTTCACCAGCTTCTTGCAGTGGGTGGCCCAGGCGCTGGGTaGGTTGAAGGTCTGCCCGGTCTCCTGCCACATGATCCTTCCGTC +
Preference number: 5 (lower is better)
Translates to: GRVHQLLAVGGPGAG*VEGLPGLLPHDPSV
Trigger: GACGGAAGGATCATGTGGCAGGAGACCGGGCAGACCTTCAACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS GCA 90 bp CATCTGTGCGTCGATGTCCTCCTCTTCGATGGCAGCTGCAGTCTCTaGGTCCCCGAGCCGGCTCCGACAAGGGAAGGCTCTGAGCACCGT +
Preference number: 5 (lower is better)
Translates to: HLCVDVLLFDGSCSL*VPEPAPTREGSEHR
Trigger: ACGGTGCTCAGAGCCTTCCCTTGTCGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAGGAGGACATCGACGCACAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597036.5
CDS GCA 90 bp GAACTCCACCAGCAGCATCTCCTCTTCGATGGCAGCTGCAGTCTCTaGGTCCCCGAGCCGGCTCCGACAAGGGAAGGCTCTGAGCACCGT +
Preference number: 5 (lower is better)
Translates to: ELHQQHLLFDGSCSL*VPEPAPTREGSEHR
Trigger: ACGGTGCTCAGAGCCTTCCCTTGTCGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAGGAGATGCTGCTGGTGGAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594162.1
CDS CCA 90 bp CCTCCTCCTCCTCTTCCATCAGCAACTCCTCCTCCTCCCCTTCACTaGCTGGGCTCTCATCAGCAGCCGTGGCAGGCGTGTGCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: PPPPLPSATPPPPLH*LGSHQQPWQACAAG
Trigger: ACCAGCTGCACACGCCTGCCACGGCTGCTGATGAGAGCCCAGCCAGTGAAGGGGAGGAGGAGGAGTTGCTGATGGAAGAGGAGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGTCCAGCAGCGCGTCTTaGAGGAGCACCCGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKSSSAS*RSTRSV
Trigger: CACACTGCGGGTGCTCCTCAAAGACGCGCTGCTGGA...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGGGGTTCACCAGCTTCTaGCAGTGGGTGGCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWGFTSF*QWVAQA
Trigger: CGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCC...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GCAGGGACACAGACCAGTGAGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTCCACAGCCCGACTTCTaGGCAGGGTTCACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AGTQTSERSLTSPQPMAAPQPDF*AGFTSF
Trigger: GAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTGG...AGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCTCACTGGTCTGTGTCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGCAGGGCTGGAAGCCATaGCTGGAGCCCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALQGWKP*LEPCSR
Trigger: GCGGCTGCAGGGCTCCAGCAATGGCTTCCAGCCCTG...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGGCTCAGCTCCCCTGCTaGAGGACGCCGCACACCTGT +
Preference number: 5 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWAQLPC*RTPHTC
Trigger: ACAGGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAGC...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCCAGGCGCTGGGTGAGTaGAAGGTCTGCCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPQALGE*KVCPVS
Trigger: GGAGACCGGGCAGACCTTCAACTCACCCAGCGCCTG...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGACACAGACCAGGGGTTCACCAGCTTCTaGCAGTGGGTGGCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: HPWGCHSHWAFAGRDTDQGFTSF*QWVAQA
Trigger: CGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCC...CTGGTCTGTGTCCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCCCCGCTTCCCTGGGGTaGTGGCCTCCGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPPASLG*WPPGGQ
Trigger: CTGCCCACCCGGAGGCCACAACCCCAGGGAAGCGGG...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGACCGGAACCCGGATCTaGCTGTCCACCCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWTGTRI*LSTRFP
Trigger: AGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGGT...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGACCGGAACCCGGATCTaGCTGTCCACCCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: GHLHIHGDAIVTGPLLAGTGTRI*LSTRFP
Trigger: AGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGGT...CCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGCACAGGCTCTGGTCCTaGGGCGTCCTGCTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALHRLWS*GVLLAK
Trigger: CTTGGCCAGCAGGACGCCCAAGGACCAGAGCCTGTG...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCGCTCAGCTCCCCTGCTaGAGGACGCCGCACACCTGT +
Preference number: 5 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPAQLPC*RTPHTC
Trigger: ACAGGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAGC...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS TCA 90 bp CTGCACCGGGATCGGCACCTCGGGAGGAGGCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCCTGGGTTGCCAGAATAGTAAGGGGA +
Preference number: 5 (lower is better)
Translates to: LHRDRHLGRRHHPER*DLGLGAWVARIVRG
Trigger: TCCCCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGGTGCCGATCCCGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp CATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGACACAGACCAGTCCAGCAGCGCGTCTTaGAGGAGCACCCGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: HPWGCHSHWAFAGRDTDQSSSAS*RSTRSV
Trigger: CACACTGCGGGTGCTCCTCAAAGACGCGCTGCTGGA...CTGGTCTGTGTCCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCAGGCGCTGGGTGAGTaGAAGGTCTGCCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPAQALGE*KVCPVS
Trigger: GGAGACCGGGCAGACCTTCAACTCACCCAGCGCCTG...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAACCACAGCCCGACTTCTaGGCAGGGTTCACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LPEPIRTLKTTGAHPALEPQPDF*AGFTSF
Trigger: GAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTGG...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTCCCGCTTCCCTGGGGTaGTGGCCTCCGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: AAASVSLLPEPIRTLKTTPASLG*WPPGGQ
Trigger: CTGCCCACCCGGAGGCCACAACCCCAGGGAAGCGGG...AGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000359935.8
CDS-3UTR CAA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCGCTTCCCTGGGGTaGTGGCCTCCGGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLEPASLG*WPPGGQ
Trigger: CTGCCCACCCGGAGGCCACAACCCCAGGGAAGCGGG...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCACAGGCTCTGGTCCTaGGGCGTCCTGCTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPAHRLWS*GVLLAK
Trigger: CTTGGCCAGCAGGACGCCCAAGGACCAGAGCCTGTG...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000599840.6
CDS CCA 90 bp GGATCGGCACCTCGGGAGGAGGCATCACCCAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGCCAGAATAGTAAGGGGAGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: GSAPREEASPRKVRS*TRGLGCQNSKGSRA
Trigger: TGCTCTGCTCCCCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGGTGCCGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCTCCAGCAGCGCGTCTTaGAGGAGCACCCGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPASSSAS*RSTRSV
Trigger: CACACTGCGGGTGCTCCTCAAAGACGCGCTGCTGGA...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGAGTGGTCTCCGACTCTaGTCCTCTGCTGAGACCCCT +
Preference number: 5 (lower is better)
Translates to: GHLHIHGDAIVTGPLLAGSGLRL*SSAETP
Trigger: AGGGGTCTCAGCAGAGGACAAGAGTCGGAGACCACT...CCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp CCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGGCCTAGAAACAGCCACGTaGAACGGCTGGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: PEPIRTLKTTGAHPALEGLETAT*NGWNLL
Trigger: CAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAG...GCCTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCCAGGGCTGGAAGCCATaGCTGGAGCCCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPQGWKP*LEPCSR
Trigger: GCGGCTGCAGGGCTCCAGCAATGGCTTCCAGCCCTG...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp GCAGCATCATCTCGTGAAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCAGGGCTGGAAGCCATaGCTGGAGCCCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: AASSREGCHWSGSCPGRRQGWKP*LEPCSR
Trigger: GCGGCTGCAGGGCTCCAGCAATGGCTTCCAGCCCTG...CCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTTCACGAGATGATGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS GCA 90 bp TCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATGGGGATaGCATAGTCACTGGGCCTTTGCTCGGGAGGAGGCATCACCCAGA +
Preference number: 5 (lower is better)
Translates to: SGSCPGRRPSPHPWG*HSHWAFAREEASPR
Trigger: TCTGGGTGATGCCTCCTCCCGAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359935.8
ENST00000597036.5
ENST00000599840.6
CDS CCA 90 bp CCAGCAGCATCTCGGGAGGAGGCATCACCCAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGCCAGAATAGTAAGGGGAGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: PAASREEASPRKVRS*TRGLGCQNSKGSRA
Trigger: TGCTCTGCTCCCCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGATGCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000596722.5
CDS CCA 90 bp TGGGCCTTTGCTCGGGAGGAGGCATCACCCAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGCCAGAATAGTAAGGGGAGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: WAFAREEASPRKVRS*TRGLGCQNSKGSRA
Trigger: TGCTCTGCTCCCCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGCAAAGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359935.8
ENST00000597036.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCTCCAGCAGCGCGTCTTaGAGGAGCACCCGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTSSSAS*RSTRSV
Trigger: CACACTGCGGGTGCTCCTCAAAGACGCGCTGCTGGA...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTCAGGCGCTGGGTGAGTaGAAGGTCTGCCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPQALGE*KVCPVS
Trigger: GGAGACCGGGCAGACCTTCAACTCACCCAGCGCCTG...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACGGGTTCACCAGCTTCTaGCAGTGGGTGGCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: SVSLLPEPIRTLKTTGAHGFTSF*QWVAQA
Trigger: CGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCC...GTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGTTCTGGCCTTTGTACTaGACAGAGGCCCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWFWPLY*TEAQPQ
Trigger: CTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAA...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GGGTTCCTGGAGCCTCACGAGGTCAGGGGAACCCTTGTAGAACTCCACCAGCAGTTCTGGCCTTTGTACTaGACAGAGGCCCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: GFLEPHEVRGTLVELHQQFWPLY*TEAQPQ
Trigger: CTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAA...CTGCTGGTGGAGTTCTACAAGGGTTCCCCTGACCTCGTGAGGCTCCAGGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCAGTGGTCTCCGACTCTaGTCCTCTGCTGAGACCCCT +
Preference number: 5 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPSGLRL*SSAETP
Trigger: AGGGGTCTCAGCAGAGGACAAGAGTCGGAGACCACT...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GCAGGGACACAGACCAGTGAGAGAAGCCTCACCAGCCCGCAGCCCATGGCAGCTCTAGAAACAGCCACGTaGAACGGCTGGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: AGTQTSERSLTSPQPMAALETAT*NGWNLL
Trigger: CAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAG...AGCTGCCATGGGCTGCGGGCTGGTGAGGCTTCTCTCACTGGTCTGTGTCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCCAGAAAGGTGAGATCTaGGACTCGGGGCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPQKGEI*DSGPGL
Trigger: CAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTG...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCGCTCAGCTCCCCTGCTaGAGGACGCCGCACACCTGT +
Preference number: 5 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGAAQLPC*RTPHTC
Trigger: ACAGGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAGC...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR CAA 90 bp AAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATGGCAGCTGGGGACAATaGGCAGTGCCCGGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: KDVIGQEAVLDVGHLHIHGSWGQ*AVPGLG
Trigger: TCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCC...ATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS TCA 90 bp GGAGCCAGGTGGCCTTGTACTTGTCCAGTTTCTGGCCTTTGTACTTaGCAGAGGCCCAGCCACAGCCCGACTTCTTGGCAGGGTTCACCA +
Preference number: 5 (lower is better)
Translates to: GARWPCTCPVSGLCT*QRPSHSPTSWQGSP
Trigger: TGGTGAACCCTGCCAAGAAGTCGGGCTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTACAAGGCCACCTGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS TCA 90 bp GAACTCCACCAGCAGCATCTCGGGAGGAGGCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCCTGGGTTGCCAGAATAGTAAGGGGA +
Preference number: 5 (lower is better)
Translates to: ELHQQHLGRRHHPER*DLGLGAWVARIVRG
Trigger: TCCCCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGATGCTGCTGGTGGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000596722.5
CDS CCA 90 bp CATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATaGGGATGCCATAGTCACTGGGCCTTTGCTCGGGAGGAGGCATCA +
Preference number: 5 (lower is better)
Translates to: HWSGSCPGRRPSPHP*GCHSHWAFAREEAS
Trigger: TGATGCCTCCTCCCGAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359935.8
ENST00000597036.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTTCCAGCAGCGCGTCTTaGAGGAGCACCCGCAGTGTG +
Preference number: 5 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPSSSAS*RSTRSV
Trigger: CACACTGCGGGTGCTCCTCAAAGACGCGCTGCTGGA...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCAGGCGCTGGGTGAGTaGAAGGTCTGCCCGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLEQALGE*KVCPVS
Trigger: GGAGACCGGGCAGACCTTCAACTCACCCAGCGCCTG...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp CTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGGGTTCACCAGCTTCTaGCAGTGGGTGGCCCAGGCG +
Preference number: 5 (lower is better)
Translates to: LLLPFLYYLSPSGPSRQLGFTSF*QWVAQA
Trigger: CGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCC...CAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000359935.8
CDS-3UTR CAA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCCACAGCCCGACTTCTaGGCAGGGTTCACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTPQPDF*AGFTSF
Trigger: GAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTGG...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAATCCAGTTTCTGGCCTTaGTACTTGACAGAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LPEPIRTLKTTGAHPALESSFWP*YLTEAQ
Trigger: CTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGA...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAACAGGTGGCCTTGTACTaGTCCAGTTTCTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: LPEPIRTLKTTGAHPALEQVALY*SSFWPL
Trigger: CAAAGGCCAGAAACTGGACAAGTACAAGGCCACCTG...TTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCAGTGGTCTCCGACTCTaGTCCTCTGCTGAGACCCCT +
Preference number: 5 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPASGLRL*SSAETP
Trigger: AGGGGTCTCAGCAGAGGACAAGAGTCGGAGACCACT...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCACCGGAACCCGGATCTaGCTGTCCACCCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGATGTRI*LSTRFP
Trigger: AGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGGT...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGACCGGAACCCGGATCTaGCTGTCCACCCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLTGTRI*LSTRFP
Trigger: AGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGGT...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp TACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGAAGCTAGAAACAGCCACGTaGAACGGCTGGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: YLSPSGPSRQLEPTLPWKLETAT*NGWNLL
Trigger: CAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAG...CTTCCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCACAGGCTCTGGTCCTaGGGCGTCCTGCTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLEHRLWS*GVLLAK
Trigger: CTTGGCCAGCAGGACGCCCAAGGACCAGAGCCTGTG...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR CAA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGGCTCAGCTCCCCTGCTaGAGGACGCCGCACACCTGT +
Preference number: 5 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLEAQLPC*RTPHTC
Trigger: ACAGGTGTGCGGCGTCCTCAAGCAGGGGAGCTGAGC...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000599840.6
CDS-3UTR CAA 90 bp GACGTAGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGATAGTCACTGGGCCTTaGCTGGCAGGGACACAGACC +
Preference number: 5 (lower is better)
Translates to: DVGHLHIHGDAIVTGPLLIVTGP*LAGTQT
Trigger: GGTCTGTGTCCCTGCCAGCAAAGGCCCAGTGACTAT...CAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS TCA 90 bp ATAGTCACTGGGCCTTTGCTCGGGAGGAGGCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCCTGGGTTGCCAGAATAGTAAGGGGA +
Preference number: 5 (lower is better)
Translates to: IVTGPLLGRRHHPER*DLGLGAWVARIVRG
Trigger: TCCCCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGCAAAGGCCCAGTGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359935.8
ENST00000597036.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCCCACAGCCCGACTTCTaGGCAGGGTTCACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LPFLYYLSPSGPSRQLEPPQPDF*AGFTSF
Trigger: GAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTGG...GGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp TCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCTTCTGGCCTTTGTACTaGACAGAGGCCCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: SLLPEPIRTLKTTGAHPAFWPLY*TEAQPQ
Trigger: CTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAA...GGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGACCACAGCCCGACTTCTaGGCAGGGTTCACCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AASVSLLPEPIRTLKTTGPQPDF*AGFTSF
Trigger: GAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTGG...TCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCAGTGGTCTCCGACTCTaGTCCTCTGCTGAGACCCCT +
Preference number: 5 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGASGLRL*SSAETP
Trigger: AGGGGTCTCAGCAGAGGACAAGAGTCGGAGACCACT...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp TATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGGTTGAACGGCTGGAACTaGTTGATGGCTGCAAAGGAT +
Preference number: 5 (lower is better)
Translates to: YYLSPSGPSRQLEPTLPWLNGWN*LMAAKD
Trigger: ATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAA...CCAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGGCAGGGTTGAACGGCTGGAACTaGTTGATGGCTGCAAAGGAT +
Preference number: 5 (lower is better)
Translates to: GHLHIHGDAIVTGPLLAGLNGWN*LMAAKD
Trigger: ATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAA...CCCTGCCAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp GCAGCATCATCTCGTGAAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCAGAAAGGTGAGATCTaGGACTCGGGGCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: AASSREGCHWSGSCPGRRQKGEI*DSGPGL
Trigger: CAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTG...CCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTTCACGAGATGATGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCAGAAAGGTGAGATCTaGGACTCGGGGCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLQKGEI*DSGPGL
Trigger: CAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTG...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCAGAAAGGTGAGATCTaGGACTCGGGGCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGAQKGEI*DSGPGL
Trigger: CAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTG...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp TCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACTTCTGGCCTTTGTACTaGACAGAGGCCCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: SVSLLPEPIRTLKTTGAHFWPLY*TEAQPQ
Trigger: CTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAA...GTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp GGCTGGCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAGGTGGCCTTGTACTaGTCCAGTTTCTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GWLLLPFLYYLSPSGPSRQVALY*SSFWPL
Trigger: CAAAGGCCAGAAACTGGACAAGTACAAGGCCACCTG...TCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262966.12
CDS-3UTR CAA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCAGGTGGCCTTGTACTaGTCCAGTTTCTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTQVALY*SSFWPL
Trigger: CAAAGGCCAGAAACTGGACAAGTACAAGGCCACCTG...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp GCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTAGTGGTCTCCGACTCTaGTCCTCTGCTGAGACCCCT +
Preference number: 5 (lower is better)
Translates to: AAASVSLLPEPIRTLKTTSGLRL*SSAETP
Trigger: AGGGGTCTCAGCAGAGGACAAGAGTCGGAGACCACT...AGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000359935.8
CDS-3UTR CAA 90 bp TTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTGAACGGCTGGAACTTGTaGATGGCTGCAAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: LLPEPIRTLKTTGAHPALNGWNL*MAAKDV
Trigger: AACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTT...CAGGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCAACGGCTGGAACTTGTaGATGGCTGCAAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPNGWNL*MAAKDV
Trigger: AACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTT...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGCCCTTGAACGGCTGGAACTaGTTGATGGCTGCAAAGGAT +
Preference number: 5 (lower is better)
Translates to: LYYLSPSGPSRQLEPTLPLNGWN*LMAAKD
Trigger: ATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAA...GGGCAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTCAGAAAGGTGAGATCTaGGACTCGGGGCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: AAASVSLLPEPIRTLKTTQKGEI*DSGPGL
Trigger: CAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTG...AGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000359935.8
CDS-3UTR CAA 90 bp GCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCTCCAGTTTCTGGCCTTaGTACTTGACAGAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: ASVSLLPEPIRTLKTTGASSFWP*YLTEAQ
Trigger: CTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGA...GGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp GTGAAGGATGTCATTGGTCAGGAAGCTGTCCTGGACGTAGGCCATCTCCACATCTCCAGTTTCTGGCCTTaGTACTTGACAGAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: VKDVIGQEAVLDVGHLHISSFWP*YLTEAQ
Trigger: CTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGA...GATGTGGAGATGGCCTACGTCCAGGACAGCTTCCTGACCAATGACATCCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGTCCAGTTTCTGGCCTTaGTACTTGACAGAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLSSFWP*YLTEAQ
Trigger: CTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGA...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GACGTAGGCCATCTCCACATCCATGGGGATGCCATAGTCACTGGGCCTTTGCTGAACGGCTGGAACTTGTaGATGGCTGCAAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: DVGHLHIHGDAIVTGPLLNGWNL*MAAKDV
Trigger: AACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTT...CAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS CCA 90 bp TCCAGCAGGAACAGCACGTTGCTAGAAACAGCCACGTTGAACGGCTaGAACTTGTTGATGGCTGCAAAGGATGTTACTTCCACCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SSRNSTLLETATLNG*NLLMAAKDVTSTRV
Trigger: CACCCTGGTGGAAGTAACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAGCAACGTGCTGTTCCTGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS-3UTR CAA 90 bp GCTGCTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTTCCAGTTTCTGGCCTTaGTACTTGACAGAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: AAASVSLLPEPIRTLKTTSSFWP*YLTEAQ
Trigger: CTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGA...AGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000359935.8
CDS-3UTR CAA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCAGGTGGCCTTGTACTaGTCCAGTTTCTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLEQVALY*SSFWPL
Trigger: CAAAGGCCAGAAACTGGACAAGTACAAGGCCACCTG...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCAACGGCTGGAACTTGTaGATGGCTGCAAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTNGWNL*MAAKDV
Trigger: AACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTT...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp CCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCTTGAACGGCTGGAACTaGTTGATGGCTGCAAAGGAT +
Preference number: 5 (lower is better)
Translates to: PFLYYLSPSGPSRQLEPTLNGWN*LMAAKD
Trigger: ATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAA...GGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS-3UTR CAA 90 bp GTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTCTAGAAACAGCCACGTaGAACGGCTGGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: VSLLPEPIRTLKTTGAHPLETAT*NGWNLL
Trigger: CAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAG...AGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS CCA 90 bp ATCAGCAGGAACAGCACGTTGCTAGAAACAGCCACGTTGAACGGCTaGAACTTGTTGATGGCTGCAAAGGATGTTACTTCCACCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ISRNSTLLETATLNG*NLLMAAKDVTSTRV
Trigger: CACCCTGGTGGAAGTAACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAGCAACGTGCTGTTCCTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359935.8
CDS-3UTR CAA 90 bp TGTAGAACTCCACCAGCAGCATCATCTCGTGAAGGATGTCATTGGTCAGGAAGCCAGGTGGCCTTGTACTaGTCCAGTTTCTGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: CRTPPAASSREGCHWSGSQVALY*SSFWPL
Trigger: CAAAGGCCAGAAACTGGACAAGTACAAGGCCACCTG...GCTTCCTGACCAATGACATCCTTCACGAGATGATGCTGCTGGTGGAGTTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS-3UTR CAA 90 bp TTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCCCACCCTGAACGGCTGGAACTTGTaGATGGCTGCAAAGGATGTT +
Preference number: 5 (lower is better)
Translates to: FLYYLSPSGPSRQLEPTLNGWNL*MAAKDV
Trigger: AACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTT...CAGGGTGGGCTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000596722.5
ENST00000599840.6
CDS-3UTR CAA 90 bp CTGCTTCCGTTTCTTTATTACCTGAGCCCATCCGGACCCTCAAGACAACTGGAGCTAGAAACAGCCACGTaGAACGGCTGGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: LLPFLYYLSPSGPSRQLELETAT*NGWNLL
Trigger: CAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAG...CTCCAGTTGTCTTGAGGGTCCGGATGGGCTCAGGTAATAAAGAAACGGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000599840.6
CDS GCA 72 bp GGGACAGCGGCTCCGGAGCTGCGGACAGCGAGAGGCTaGAGGGAGGCCGCTCGCCCCACGGCTCTGCAGCCC +
Preference number: 6 (lower is better)
Translates to: GTAAPELRTARG*REAARPTALQP
Trigger: GGGCTGCAGAGCCGTGGGGCGAGCGGCCTCCCTGCAGCCTCTCGCTGTCCGCAGCTCCGGAGCCGCTGTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596722.5
CDS CAA 72 bp CCCGCCCGCTGCCCACCGACTGGGCTCCGGAGCCCCTaGCCCCTAGACAGGGTGGGCCACACACCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: PARCPPTGLRSP*PLDRVGHTPAG
Trigger: TCCTGCTGGTGTGTGGCCCACCCTGTCTAGGGGCAAGGGGCTCCGGAGCCCAGTCGGTGGGCAGCGGGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601877.1
CDS GCA 72 bp GCTGGGAACGGGAGAGTGCACACCCCGGCTCAGCTCTaGACCGGGATCGGCACCTCGGGAGGAGGCATCACC +
Preference number: 6 (lower is better)
Translates to: AGNGRVHTPAQL*TGIGTSGGGIT
Trigger: GGTGATGCCTCCTCCCGAGGTGCCGATCCCGGTGCAGAGCTGAGCCGGGGTGTGCACTCTCCCGTTCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS CCA 72 bp CCTCCCCTTCACTGGCTGGGCTCTCATCAGCAGCCGTaGCAGGCGTGTGCAGCTGGTGCAGCCGGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PPLHWLGSHQQP*QACAAGAAGAR
Trigger: CCTGGCTCCGGCTGCACCAGCTGCACACGCCTGCCACGGCTGCTGATGAGAGCCCAGCCAGTGAAGGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CCA 72 bp TGCAGAGATGGCAGCGCCGGGCTGTGTGGGTGGCTGTaGTACCAGCCCACCAGGGACAGGCCCCGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: CRDGSAGLCGWL*YQPTRDRPRRN
Trigger: GTTCCTGCGGGGCCTGTCCCTGGTGGGCTGGTACCACAGCCACCCACACAGCCCGGCGCTGCCATCTCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000599840.6
CDS GCA 72 bp CCACCAGGGTGTGGGGGTTCCTGGCCAAGTCGCGGCTaGCCAGCATGCAGTAGCGGACCGGAACCCGGATCT +
Preference number: 6 (lower is better)
Translates to: PPGCGGSWPSRG*PACSSGPEPGS
Trigger: AGATCCGGGTTCCGGTCCGCTACTGCATGCTGGGCAGCCGCGACTTGGCCAGGAACCCCCACACCCTGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
ENST00000601877.1
CDS GCA 72 bp GGACAATTGGCAGTGCCCGGGCTGGGAACGGGAGAGTaGACACCCCGGCTCAGCTCTGCACCGGGATCGGCA +
Preference number: 6 (lower is better)
Translates to: GQLAVPGLGTGE*TPRLSSAPGSA
Trigger: TGCCGATCCCGGTGCAGAGCTGAGCCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS CCA 72 bp CCCATGGCAGCTGGGGACAATTGGCAGTGCCCGGGCTaGGAACGGGAGAGTGCACACCCCGGCTCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: PMAAGDNWQCPG*ERESAHPGSAL
Trigger: CAGAGCTGAGCCGGGGTGTGCACTCTCCCGTTCCCAGCCCGGGCACTGCCAATTGTCCCCAGCTGCCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS TCA 72 bp CCCTGCTTGAGGACGCCGCACACCTGTTCCAGGACGTaGCACAGGCTCTGGTCCTTGGGCGTCCTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: PCLRTPHTCSRT*HRLWSLGVLLA
Trigger: GGCCAGCAGGACGCCCAAGGACCAGAGCCTGTGTCACGTCCTGGAACAGGTGTGCGGCGTCCTCAAGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594162.1
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS GCA 72 bp TGCCCAGCATGCAGTAGCGGACCGGAACCCGGATCTTaGTGTCCACCCGCTTCCCTGGGGTTGTGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: CPACSSGPEPGS*CPPASLGLWPP
Trigger: CGGAGGCCACAACCCCAGGGAAGCGGGTGGACAGCAAGATCCGGGTTCCGGTCCGCTACTGCATGCTGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
ENST00000601877.1
CDS GCA 72 bp GCTGGAGCCCTGCAGCCGCAGCTGGTAGTCCATCTGTaGGTCGATGTCCTGCAGAGATGGCAGCGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: AGALQPQLVVHL*VDVLQRWQRRA
Trigger: AGCCCGGCGCTGCCATCTCTGCAGGACATCGACGCACAGATGGACTACCAGCTGCGGCTGCAGGGCTCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000599840.6
CDS CCA 72 bp GGGCTCTCATCAGCAGCCGTGGCAGGCGTGTGCAGCTaGTGCAGCCGGAGCCAGGTGGCCTTGTACTTGTCC +
Preference number: 6 (lower is better)
Translates to: GLSSAAVAGVCS*CSRSQVALYLS
Trigger: GGACAAGTACAAGGCCACCTGGCTCCGGCTGCACCAGCTGCACACGCCTGCCACGGCTGCTGATGAGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CAA 90 bp GAGGCCCAGCCACAGCCCGACTTCTTGGCAGGGTTCACCAGCTTCTaGCAGTGGGTGGCCCAGGCGCTGGGTGAGTTGAAGGTCTGCCCG +
Preference number: 6 (lower is better)
Translates to: EAQPQPDFLAGFTSF*QWVAQALGELKVCP
Trigger: CGGGCAGACCTTCAACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTGGCTGGGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS TCA 72 bp CTTCCCTGGGGTTGTGGCCTCCGGGTGGGCAGGCTCTaGAGGGCTCTTCCCCAGTGGTCTCCGACTCTTGTC +
Preference number: 6 (lower is better)
Translates to: LPWGCGLRVGRL*RALPQWSPTLV
Trigger: GACAAGAGTCGGAGACCACTGGGGAAGAGCCCTTCAGAGCCTGCCCACCCGGAGGCCACAACCCCAGGGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS GCA 72 bp CAGGCGCTGGGTGAGTTGAAGGTCTGCCCGGTCTCCTaGCACATGATCCTTCCGTCTGGCTGCAGGTCGCCC +
Preference number: 6 (lower is better)
Translates to: QALGELKVCPVS*HMILPSGCRSP
Trigger: GGGCGACCTGCAGCCAGACGGAAGGATCATGTGGCAGGAGACCGGGCAGACCTTCAACTCACCCAGCGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS GCA 72 bp TGTGGGGGTTCCTGGCCAAGTCGCGGCTGCCCAGCATaGAGTAGCGGACCGGAACCCGGATCTTGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: CGGSWPSRGCPA*SSGPEPGSCCP
Trigger: TGGACAGCAAGATCCGGGTTCCGGTCCGCTACTGCATGCTGGGCAGCCGCGACTTGGCCAGGAACCCCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
ENST00000601877.1
CDS CCA 72 bp AGCAGAGCAGGGCGAGGCAGGGCTGGAAGCCATTGCTaGAGCCCTGCAGCCGCAGCTGGTAGTCCATCTGTG +
Preference number: 6 (lower is better)
Translates to: SRAGRGRAGSHC*SPAAAAGSPSV
Trigger: CACAGATGGACTACCAGCTGCGGCTGCAGGGCTCCAGCAATGGCTTCCAGCCCTGCCTCGCCCTGCTCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS GCA 72 bp GTCGATGTCCTCCTCTTCGATGGCAGCTGCAGTCTCTaGGTCCCCGAGCCGGCTCCGACAAGGGAAGGCTCT +
Preference number: 6 (lower is better)
Translates to: VDVLLFDGSCSL*VPEPAPTREGS
Trigger: AGAGCCTTCCCTTGTCGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAGGAGGACATCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597036.5
CDS GCA 72 bp CATCTGTGCGTCGATGTCCTCCTCTTCGATGGCAGCTaGAGTCTCTGCGTCCCCGAGCCGGCTCCGACAAGG +
Preference number: 6 (lower is better)
Translates to: HLCVDVLLFDGS*SLCVPEPAPTR
Trigger: CCTTGTCGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAGGAGGACATCGACGCACAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597036.5
CDS GCA 72 bp GAACTCCACCAGCAGCATCTCCTCTTCGATGGCAGCTaGAGTCTCTGCGTCCCCGAGCCGGCTCCGACAAGG +
Preference number: 6 (lower is better)
Translates to: ELHQQHLLFDGS*SLCVPEPAPTR
Trigger: CCTTGTCGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAGGAGATGCTGCTGGTGGAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594162.1
CDS CAA 90 bp GGGTTCACCAGCTTCTTGCAGTGGGTGGCCCAGGCGCTGGGTGAGTaGAAGGTCTGCCCGGTCTCCTGCCACATGATCCTTCCGTCTGGC +
Preference number: 6 (lower is better)
Translates to: GFTSFLQWVAQALGE*KVCPVSCHMILPSG
Trigger: GCCAGACGGAAGGATCATGTGGCAGGAGACCGGGCAGACCTTCAACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CAA 90 bp GGGTGGGCAGGCTCTGAAGGGCTCTTCCCCAGTGGTCTCCGACTCTaGTCCTCTGCTGAGACCCCTGCCAGAACGTCCTCCTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GWAGSEGLFPSGLRL*SSAETPARTSSSSS
Trigger: AGAGGAGGAGGAGGACGTTCTGGCAGGGGTCTCAGCAGAGGACAAGAGTCGGAGACCACTGGGGAAGAGCCCTTCAGAGCCTGCCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS GCA 72 bp GAACAGGCTCTGGTAGATCTCCTCTTCGATGGCAGCTaGAGTCTCTGCGTCCCCGAGCCGGCTCCGACAAGG +
Preference number: 6 (lower is better)
Translates to: EQALVDLLFDGS*SLCVPEPAPTR
Trigger: CCTTGTCGGAGCCGGCTCGGGGACGCAGAGACTGCAGCTGCCATCGAAGAGGAGATCTACCAGAGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262966.12
ENST00000594716.5
ENST00000596722.5
ENST00000599840.6
CDS CCA 72 bp GGTCTGCCCGGTCTCCTGCCACATGATCCTTCCGTCTaGCTGCAGGTCGCCCAGGAACTTCTTCCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: GLPGLLPHDPSV*LQVAQELLPQV
Trigger: TACCTGGGGAAGAAGTTCCTGGGCGACCTGCAGCCAGACGGAAGGATCATGTGGCAGGAGACCGGGCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CCA 72 bp CCCGACTTCTTGGCAGGGTTCACCAGCTTCTTGCAGTaGGTGGCCCAGGCGCTGGGTGAGTTGAAGGTCTGC +
Preference number: 6 (lower is better)
Translates to: PDFLAGFTSFLQ*VAQALGELKVC
Trigger: GCAGACCTTCAACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCCTGCCAAGAAGTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CCA 72 bp CTGGTAGTCCATCTGTGCGTCGATGTCCTGCAGAGATaGCAGCGCCGGGCTGTGTGGGTGGCTGTGGTACCA +
Preference number: 6 (lower is better)
Translates to: LVVHLCVDVLQR*QRRAVWVAVVP
Trigger: TGGTACCACAGCCACCCACACAGCCCGGCGCTGCCATCTCTGCAGGACATCGACGCACAGATGGACTACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000599840.6
CDS CAA 72 bp CCACAGCCCGACTTCTTGGCAGGGTTCACCAGCTTCTaGCAGTGGGTGGCCCAGGCGCTGGGTGAGTTGAAG +
Preference number: 6 (lower is better)
Translates to: PQPDFLAGFTSF*QWVAQALGELK
Trigger: CTTCAACTCACCCAGCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CAA 72 bp GGCTCTGAAGGGCTCTTCCCCAGTGGTCTCCGACTCTaGTCCTCTGCTGAGACCCCTGCCAGAACGTCCTCC +
Preference number: 6 (lower is better)
Translates to: GSEGLFPSGLRL*SSAETPARTSS
Trigger: GGAGGACGTTCTGGCAGGGGTCTCAGCAGAGGACAAGAGTCGGAGACCACTGGGGAAGAGCCCTTCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CAA 90 bp TTCTGGCCTTTGTACTTGACAGAGGCCCAGCCACAGCCCGACTTCTaGGCAGGGTTCACCAGCTTCTTGCAGTGGGTGGCCCAGGCGCTG +
Preference number: 6 (lower is better)
Translates to: FWPLYLTEAQPQPDF*AGFTSFLQWVAQAL
Trigger: CAGCGCCTGGGCCACCCACTGCAAGAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CAA 90 bp GCAGGCGTGTGCAGCTGGTGCAGCCGGAGCCAGGTGGCCTTGTACTaGTCCAGTTTCTGGCCTTTGTACTTGACAGAGGCCCAGCCACAG +
Preference number: 6 (lower is better)
Translates to: AGVCSWCSRSQVALY*SSFWPLYLTEAQPQ
Trigger: CTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTACAAGGCCACCTGGCTCCGGCTGCACCAGCTGCACACGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS TCA 72 bp GGGCCTTTGCTCGGGAGGAGGCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCCTGGGTTGCCAGAATA +
Preference number: 6 (lower is better)
Translates to: GPLLGRRHHPER*DLGLGAWVARI
Trigger: TATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGCAAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359935.8
ENST00000597036.5
ENST00000599840.6
CDS TCA 72 bp GATCGGCACCTCGGGAGGAGGCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCCTGGGTTGCCAGAATA +
Preference number: 6 (lower is better)
Translates to: DRHLGRRHHPER*DLGLGAWVARI
Trigger: TATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGGTGCCGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS GCA 72 bp TGTCCTGGACGTAGGCCATCTCCACATCCATGGGGATaGCATAGTCACTGGGCCTTTGCTCGGGAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: CPGRRPSPHPWG*HSHWAFAREEA
Trigger: TGCCTCCTCCCGAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359935.8
ENST00000597036.5
ENST00000599840.6
CDS CCA 72 bp GCTCGGGAGGAGGCATCACCCAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGCCAGAATAGTAAGGGG +
Preference number: 6 (lower is better)
Translates to: AREEASPRKVRS*TRGLGCQNSKG
Trigger: CCCCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359935.8
ENST00000597036.5
ENST00000599840.6
CDS CCA 72 bp GGAAGCTGTCCTGGACGTAGGCCATCTCCACATCCATaGGGATGCCATAGTCACTGGGCCTTTGCTCGGGAG +
Preference number: 6 (lower is better)
Translates to: GSCPGRRPSPHP*GCHSHWAFARE
Trigger: CTCCCGAGCAAAGGCCCAGTGACTATGGCATCCCCATGGATGTGGAGATGGCCTACGTCCAGGACAGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359935.8
ENST00000597036.5
ENST00000599840.6
CDS CCA 72 bp CCTCGGGAGGAGGCATCACCCAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGCCAGAATAGTAAGGGG +
Preference number: 6 (lower is better)
Translates to: PREEASPRKVRS*TRGLGCQNSKG
Trigger: CCCCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594716.5
CDS CAA 72 bp TTGTACTTGACAGAGGCCCAGCCACAGCCCGACTTCTaGGCAGGGTTCACCAGCTTCTTGCAGTGGGTGGCC +
Preference number: 6 (lower is better)
Translates to: LYLTEAQPQPDF*AGFTSFLQWVA
Trigger: GGCCACCCACTGCAAGAAGCTGGTGAACCCTGCCAAGAAGTCGGGCTGTGGCTGGGCCTCTGTCAAGTACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CAA 90 bp CGGAGCCAGGTGGCCTTGTACTTGTCCAGTTTCTGGCCTTTGTACTaGACAGAGGCCCAGCCACAGCCCGACTTCTTGGCAGGGTTCACC +
Preference number: 6 (lower is better)
Translates to: RSQVALYLSSFWPLY*TEAQPQPDFLAGFT
Trigger: GGTGAACCCTGCCAAGAAGTCGGGCTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTACAAGGCCACCTGGCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS TCA 72 bp CAGCAGCATCTCGGGAGGAGGCATCACCCAGAAAGGTaGGATCTTGGACTCGGGGCCTGGGTTGCCAGAATA +
Preference number: 6 (lower is better)
Translates to: QQHLGRRHHPER*DLGLGAWVARI
Trigger: TATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGATGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000596722.5
CDS CCA 72 bp TCTCGGGAGGAGGCATCACCCAGAAAGGTGAGATCTTaGACTCGGGGCCTGGGTTGCCAGAATAGTAAGGGG +
Preference number: 6 (lower is better)
Translates to: SREEASPRKVRS*TRGLGCQNSKG
Trigger: CCCCTTACTATTCTGGCAACCCAGGCCCCGAGTCCAAGATCTCACCTTTCTGGGTGATGCCTCCTCCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262966.12
ENST00000596722.5
CDS CAA 72 bp AGCCAGGTGGCCTTGTACTTGTCCAGTTTCTGGCCTTaGTACTTGACAGAGGCCCAGCCACAGCCCGACTTC +
Preference number: 6 (lower is better)
Translates to: SQVALYLSSFWP*YLTEAQPQPDF
Trigger: GAAGTCGGGCTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTACAAGGCCACCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS TCA 72 bp TGGCCTTGTACTTGTCCAGTTTCTGGCCTTTGTACTTaGCAGAGGCCCAGCCACAGCCCGACTTCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: WPCTCPVSGLCT*QRPSHSPTSWQ
Trigger: CTGCCAAGAAGTCGGGCTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTACAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CAA 72 bp GTGGCCTTGTACTTGTCCAGTTTCTGGCCTTTGTACTaGACAGAGGCCCAGCCACAGCCCGACTTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: VALYLSSFWPLY*TEAQPQPDFLA
Trigger: TGCCAAGAAGTCGGGCTGTGGCTGGGCCTCTGTCAAGTACAAAGGCCAGAAACTGGACAAGTACAAGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CAA 90 bp AGGAACAGCACGTTGCTAGAAACAGCCACGTTGAACGGCTGGAACTaGTTGATGGCTGCAAAGGATGTTACTTCCACCAGGGTGTGGGGG +
Preference number: 6 (lower is better)
Translates to: RNSTLLETATLNGWN*LMAAKDVTSTRVWG
Trigger: CCCCCACACCCTGGTGGAAGTAACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAGCAACGTGCTGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
ENST00000601877.1
CDS CAA 90 bp CTGTGGAAGTCCAGCAGGAACAGCACGTTGCTAGAAACAGCCACGTaGAACGGCTGGAACTTGTTGATGGCTGCAAAGGATGTTACTTCC +
Preference number: 6 (lower is better)
Translates to: LWKSSRNSTLLETAT*NGWNLLMAAKDVTS
Trigger: GGAAGTAACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAGCAACGTGCTGTTCCTGCTGGACTTCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262966.12
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
CDS CAA 72 bp ACGTTGCTAGAAACAGCCACGTTGAACGGCTGGAACTaGTTGATGGCTGCAAAGGATGTTACTTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: TLLETATLNGWN*LMAAKDVTSTR
Trigger: CCTGGTGGAAGTAACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAGCAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
ENST00000601877.1
CDS CAA 72 bp ATCAGCAGGAACAGCACGTTGCTAGAAACAGCCACGTaGAACGGCTGGAACTTGTTGATGGCTGCAAAGGAT +
Preference number: 6 (lower is better)
Translates to: ISRNSTLLETAT*NGWNLLMAAKD
Trigger: ATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAGCAACGTGCTGTTCCTGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359935.8
CDS CCA 72 bp AACAGCACGTTGCTAGAAACAGCCACGTTGAACGGCTaGAACTTGTTGATGGCTGCAAAGGATGTTACTTCC +
Preference number: 6 (lower is better)
Translates to: NSTLLETATLNG*NLLMAAKDVTS
Trigger: GGAAGTAACATCCTTTGCAGCCATCAACAAGTTCCAGCCGTTCAACGTGGCTGTTTCTAGCAACGTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262966.12
ENST00000359935.8
ENST00000594716.5
ENST00000596722.5
ENST00000597036.5
ENST00000599840.6
ENST00000601877.1