RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPLKIP (Homo sapiens)

Ensembl gene IDs: ENSG00000168303

Ensembl transcript IDs: ENST00000306984.8

Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATATCCACTCACACATCCATGTCCATCTGAAGCTTGTATCTCCCTaGACCCACCCCAAAATAATTACTATATCTAAAGCATGTTACCTT +
Preference number: 1 (lower is better)
Translates to: HIHSHIHVHLKLVSP*THPKIITISKACYL
Trigger: AAGGTAACATGCTTTAGATATAGTAATTATTTTGGGGTGGGTTCAGGGAGATACAAGCTTCAGATGGACATGGATGTGTGAGTGGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR TCA 90 bp ACTGTGGCCTTGGCCACAGTTAATTGGTTCAATAATACAGAAACATaGTCTAAGTATGGCAAATTTGTCTTCTCTTGGATTGATGGAGAT +
Preference number: 1 (lower is better)
Translates to: TVALATVNWFNNTET*SKYGKFVFSWIDGD
Trigger: ATCTCCATCAATCCAAGAGAAGACAAATTTGCCATACTTAGATCATGTTTCTGTATTATTGAACCAATTAACTGTGGCCAAGGCCACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCGTAAACTCAGCACTGTaGGAGGCTGAGATGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTVNSAL*EAEMGG
Trigger: TCCACCCATCTCAGCCTCCCACAGTGCTGAGTTTAC...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCAAAATGGGAGACCAGTaGTTACCAAAAGGCAGCAGG +
Preference number: 2 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTKMGDQ*LPKGSR
Trigger: CCTGCTGCCTTTTGGTAATCACTGGTCTCCCATTTT...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCTGTCCAAGATGTTCCTaGCACATGAAGCTTCCAGTT +
Preference number: 2 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTCPRCS*HMKLPV
Trigger: AACTGGAAGCTTCATGTGTCAGGAACATCTTGGACA...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCCCTGTCTCATTATGGTaGTGTGTCCATGATTCAAGT +
Preference number: 2 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTPVSLW*CVHDSS
Trigger: ACTTGAATCATGGACACATCACCATAATGAGACAGG...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR GCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCGATTTACATGGGCACTaGGATCTGAATTTGCATTCC +
Preference number: 2 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTDLHGH*DLNLHS
Trigger: GGAATGCAAATTCAGATCGCAGTGCCCATGTAAATC...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGTTTTTGCAATGGAAGTaGTTTGAGGCTGCTGGTAGC +
Preference number: 2 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMFLQWK*FEAAGS
Trigger: GCTACCAGCAGCCTCAAATCACTTCCATTGCAAAAA...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCATGGTGATGTGTCCATaGTTCAAGTTAATTAGGTCT +
Preference number: 2 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTMVMCP*FKLIRS
Trigger: AGACCTAATTAACTTGAATCATGGACACATCACCAT...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR GCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCTGCATGGTCTATTCTTaGCTTTTCCAGTTAAATGAG +
Preference number: 2 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTCMVYS*LFQLNE
Trigger: CTCATTTAACTGGAAAAGGCAAGAATAGACCATGCA...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCAAATTTGTCTTCTCTTaGATTGATGGAGATGAGAGA +
Preference number: 2 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTKFVFS*IDGDER
Trigger: TCTCTCATCTCCATCAATCCAAGAGAAGACAAATTT...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACAGGCTGGGCAGATCATaGGGTCAGGAGATTGAGACC +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNRLGRS*GQEIET
Trigger: GGTCTCAATCTCCTGACCTCATGATCTGCCCAGCCT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGCCTATGAACTCTAAGTaGCTACAAAGCATTACTGTA +
Preference number: 2 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMPMNSK*LQSITV
Trigger: TACAGTAATGCTTTGTAGTCACTTAGAGTTCATAGG...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR GCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACCCAAGATTGCACCACTaGACTCCAGCTTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNPRLHH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGTGCAATCTTGG...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACCCATATTGGCCAGGCTaGTCTCAAACTCCGAACCTC +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNPYWPG*SQTPNL
Trigger: GAGGTTCGGAGTTTGAGACCAGCCTGGCCAATATGG...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR GCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACCTGAGGCAGGAGAATTaGTTGAACTTGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNLRQEN*LNLGGR
Trigger: TCTGCCTCCCAAGTTCAAGCAATTCTCCTGCCTCAG...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGCTACAGCTCAAAGGATaGTTTACCTATTTCATTTTC +
Preference number: 2 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMLQLKG*FTYFIF
Trigger: GAAAATGAAATAGGTAAACCATCCTTTGAGCTGTAG...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACGATGGGTGGATCATTTaGGATCATGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNDGWII*DHEFET
Trigger: GGTCTCGAACTCATGATCTCAAATGATCCACCCATC...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACGTCTCACTGTGGCCTTaGCCACAGTTAATTGGTTCA +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNVSLWP*PQLIGS
Trigger: TGAACCAATTAACTGTGGCCAAGGCCACAGTGAGAC...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACTGTGGGAGGCTGAGATaGGTGGATCATTTGAGATCA +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNCGRLR*VDHLRS
Trigger: TGATCTCAAATGATCCACCCATCTCAGCCTCCCACA...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACACAGCTACCACTTATTaGGTGCTTACTATGTGCCAG +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNTATTY*VLTMCQ
Trigger: CTGGCACATAGTAAGCACTCAATAAGTGGTAGCTGT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACGGAAATGGGGGTAAATaGGAAAGTAACAGCTACCAC +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNGNGGK*ESNSYH
Trigger: GTGGTAGCTGTTACTTTCTCATTTACCCCCATTTCC...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR CAA 90 bp TTCCTCCTCCTTGATATCATGCAAACTATGCTACTGAGACAGGAATaGAGATATCTTCATCAGGCTCTTTATAATTATCAAGAATGGTGG +
Preference number: 2 (lower is better)
Translates to: FLLLDIMQTMLLRQE*RYLHQALYNYQEWW
Trigger: CCACCATTCTTGATAATTATAAAGAGCCTGATGAAGATATCTCAATTCCTGTCTCAGTAGCATAGTTTGCATGATATCAAGGAGGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR TCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACGGTTCGAGAAGGGTATaGGACTTTAAATATTGTTGG +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNGSRRV*DFKYCW
Trigger: CCAACAATATTTAAAGTCTCATACCCTTCTCGAACC...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR GCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACTGGAAATACAGAGTTTaGTTCACAGGAGATTCACCA +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNWKYRV*FTGDSP
Trigger: TGGTGAATCTCCTGTGAAGCAAACTCTGTATTTCCA...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACAAAGTTATGCTTAAATaGGTTTCTGGGGCTTCAAGT +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNKVMLK*VSGASS
Trigger: ACTTGAAGCCCCAGAAACCCATTTAAGCATAACTTT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACGCATTTCCAAAATCCTaGCTTTCATGGAGCTTTTAT +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNAFPKS*LSWSFY
Trigger: ATAAAAGCTCCATGAAAGCCAGGATTTTGGAAATGC...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACAATAAAGGATTTACATaGGCACTGCGATCTGAATTT +
Preference number: 2 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNNKGFT*ALRSEF
Trigger: AAATTCAGATCGCAGTGCCCATGTAAATCCTTTATT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CAA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCGGTCTCACTGTGGCCTaGGCCACAGTTAATTGGTTC +
Preference number: 3 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTGLTVA*ATVNWF
Trigger: GAACCAATTAACTGTGGCCAAGGCCACAGTGAGACC...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CAA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCAAGGTAGGGGATCACTaGAGACCAGGAGTTCAATCG +
Preference number: 3 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTKVGDH*RPGVQS
Trigger: CGATTGAACTCCTGGTCTCAAGTGATCCCCTACCTT...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CAA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCGGAGTATGTAGACCCTaGTTTGAAGACTCTACTATA +
Preference number: 3 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTGVCRP*FEDSTI
Trigger: TATAGTAGAGTCTTCAAACAAGGGTCTACATACTCC...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CAA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCATAGCATCCCTTAATTaGGAAAACCACTTCTCTACT +
Preference number: 3 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTIASLN*ENHFST
Trigger: AGTAGAGAAGTGGTTTTCCAAATTAAGGGATGCTAT...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR CCA 72 bp GGAAATTATGAGCAAAATAAAAGAGGTAATTCAGGCTaGGTGCACTGCCTCACCCATGTAAGCCCAGCACTT +
Preference number: 3 (lower is better)
Translates to: GNYEQNKRGNSG*VHCLTHVSPAL
Trigger: AAGTGCTGGGCTTACATGGGTGAGGCAGTGCACCCAGCCTGAATTACCTCTTTTATTTTGCTCATAATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR TCA 72 bp GTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATaGTTCAAGTTAATTAGGTCTCACTGTGGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: VTESCLIMVMCP*FKLIRSHCGLG
Trigger: GCCAAGGCCACAGTGAGACCTAATTAACTTGAATCATGGACACATCACCATAATGAGACAGGATTCTGTGAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CAA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACTGCAATGGAAGTGATTaGAGGCTGCTGGTAGCTATC +
Preference number: 3 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNCNGSD*RLLVAI
Trigger: GATAGCTACCAGCAGCCTCAAATCACTTCCATTGCA...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR TCA 72 bp TCACACATCCATGTCCATCTGAAGCTTGTATCTCCCTaGACCCACCCCAAAATAATTACTATATCTAAAGCA +
Preference number: 3 (lower is better)
Translates to: SHIHVHLKLVSP*THPKIITISKA
Trigger: TGCTTTAGATATAGTAATTATTTTGGGGTGGGTTCAGGGAGATACAAGCTTCAGATGGACATGGATGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR-3UTR CAA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACGATACAGAGAAATGGTaGAGTGACAATAGCAGGAGA +
Preference number: 3 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNDTEKW*SDNSRR
Trigger: TCTCCTGCTATTGTCACTCAACCATTTCTCTGTATC...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCACCCCGCGGGGGACCTaGAGTAGGAGCCAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTTPRGT*SRSQGS
Trigger: GCTACCCTGGCTCCTACTCCAGGTCCCCCGCGGGGT...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCGGGTTCCCCGGAAGCTaGTTCCGCTACCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTGFPGS*FRYPNL
Trigger: GAGGTTGGGGTAGCGGAAGCAGCTTCCGGGGAACCC...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGCCGTGTCGCGGAGAGTaGCTGCTCCCGTACGGCCTA +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMPCRGE*LLPYGL
Trigger: TAGGCCGTACGGGAGCAGTCACTCTCCGCGACACGG...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGTACGGCGGCGTGTGGTaGGGACTCCCGTACCCGTCT +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMYGGVW*GLPYPS
Trigger: AGACGGGTACGGGAGTCCGCACCACACGCCGCCGTA...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCAATTATCAAGAATGGTaGAGGGCCGGGCGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTNYQEW*RAGRGG
Trigger: GCCACCGCGCCCGGCCCTCCACCATTCTTGATAATT...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCCTGAGATCGTGCCACTaGACTCCAGCATGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTLRSCH*TPAWVT
Trigger: TGTCACCCATGCTGGAGTGCAGTGGCACGATCTCAG...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGGCGAGATCACGCCACTaGACTGCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMARSRH*TAAWAT
Trigger: TGTCGCCCAGGCTGCAGTGCAGTGGCGTGATCTCGC...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCGCCATCTTAACTCACTaGAACCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTAILTH*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGTGAGTTAAGATGGC...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGAGGTGGAGGTTGCAGTaGGGCGAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMRWRLQ*GEITPL
Trigger: CAGTGGCGTGATCTCGCCTCACTGCAACCTCCACCT...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCAGGGTAAGGAGGAGTTaGGGGCCGAAAATTCTGTCG +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTRVRRS*GPKILS
Trigger: CGACAGAATTTTCGGCCCCCAACTCCTCCTTACCCT...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCCACTGCACTCCAGCTTaGGCAACAGACTCCATCTCA +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTHCTPA*ATDSIS
Trigger: TGAGATGGAGTCTGTTGCCCAAGCTGGAGTGCAGTG...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCTGTTCAAAACCAGCCTaGCCAACATGGCGAAACTCC +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTCSKPA*PTWRNS
Trigger: GGAGTTTCGCCATGTTGGCCAGGCTGGTTTTGAACA...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCGTTGTCCCAGTTACTTaGGAGGCTGAGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTVVPVT*EAEAEE
Trigger: TTCTTCTGCCTCAGCCTCCCAAGTAACTGGGACAAC...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCGCCTTGCCAATATGGTaGAACCCCATCTCTACCAAA +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTALPIW*NPISTK
Trigger: TTTGGTAGAGATGGGGTTTCACCATATTGGCAAGGC...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGGAACCTCAAGTGATCTaGCCACCTGGGCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMEPQVI*PPGLPK
Trigger: CTTTGGGAGCCCAGGTGGGCAGATCACTTGAGGTTC...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGCTAAGGCAGGAGAACTaGTTGAACCCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMLRQEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAGTTCTCCTGCCTTAG...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACCCGTACGGCGGCGTGTaGTGCGGACTCCCGTACCCG +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNPYGGV*CGLPYP
Trigger: CGGGTACGGGAGTCCGCACCACACGCCGCCGTACGG...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGTGGTGTAGATGTCCTTaGAGAACCCTGGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMWCRCP*RTLGVG
Trigger: ACCCACCCCCAGGGTTCTCCAAGGACATCTACACCA...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCTTTTTGCAATGGAAGTaGTTTGAGGCTGCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTFLQWK*FEAAGS
Trigger: GCTACCAGCAGCCTCAAATCACTTCCATTGCAAAAA...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGGCCTGGCCAACACGGTaGAACCCCATCTCTATTCAA +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMAWPTR*NPISIQ
Trigger: TTGAATAGAGATGGGGTTTCACCGTGTTGGCCAGGC...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGGCACTCCAGCATGGGTaGCAGAACAAGACTTCGTCT +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMALQHG*QNKTSS
Trigger: AGACGAAGTCTTGTTCTGTCACCCATGCTGGAGTGC...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGCCAAGATTGCACCACTaGACTCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMPRLHH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGTGCAATCTTGG...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCCTACCACTTATTGAGTaGTTACTATGTGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTLPLIE*LLCARL
Trigger: GAGCCTGGCACATAGTAAGCACTCAATAAGTGGTAG...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGGAGATCTTGGCTCACTaGAACCTTCACTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMEILAH*NLHFLG
Trigger: GCCCAGGAAGTGAAGGTTGCAGTGAGCCAAGATCTC...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCGCAGGGAAAAAGAACTaGCATGATCCCTTGATATGG +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTAGKKN*HDPLIW
Trigger: CCATATCAAGGGATCATGCCAGTTCTTTTTCCCTGC...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGCCATATTGGCCAGGCTaGTCTCAAACTCCGAACCTC +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMPYWPG*SQTPNL
Trigger: GAGGTTCGGAGTTTGAGACCAGCCTGGCCAATATGG...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCATACAGAGAAATGGTTaGGTGACAATAGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTIQRNG*VTIAGD
Trigger: GTCTCCTGCTATTGTCACTCAACCATTTCTCTGTAT...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGGAGAACCCTGGGGGTaGGTCTGCTGCTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPGEPWG*VCCCPG
Trigger: CCCAGGGCAGCAGCAGACCCACCCCCAGGGTTCTCC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGGAAATCCCAGCACTTTaGGAAGCCAAGGTAGGGGAT +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMEIPAL*EAKVGD
Trigger: ATCCCCTACCTTGGCTTCCCAAAGTGCTGGGATTTC...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACAGCCTCCCGACTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNSLPTS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTAGTCGGGAGGCT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGGCAACCTTCACTTCCTaGGCTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMATFTS*AQAILL
Trigger: CAGGAGAATTGCTTGAGCCCAGGAAGTGAAGGTTGC...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCTGGAAATACAGAGTTTaGTTCACAGGAGATTCACCA +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTWKYRV*FTGDSP
Trigger: TGGTGAATCTCCTGTGAAGCAAACTCTGTATTTCCA...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACGTCCTTGGAGAACCCTaGGGGTGGGTCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNVLGEP*GWVCCC
Trigger: GCAGCAGCAGACCCACCCCCAGGGTTCTCCAAGGAC...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGTTCTCTAACACGCCCTaGTCCAAATGGTGTAGATGT +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMFSNTP*SKWCRC
Trigger: ACATCTACACCATTTGGATCAGGGCGTGTTAGAGAA...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCTCAGATAGAACACTTTaGTTTAGCAATGCATGGTCT +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTSDRTL*FSNAWS
Trigger: AGACCATGCATTGCTAAATCAAAGTGTTCTATCTGA...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGACAGCTACCACTTATTaGGTGCTTACTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMTATTY*VLTMCQ
Trigger: CTGGCACATAGTAAGCACTCAATAAGTGGTAGCTGT...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGGGAAATGGGGGTAAATaGGAAAGTAACAGCTACCAC +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMGNGGK*ESNSYH
Trigger: GTGGTAGCTGTTACTTTCTCATTTACCCCCATTTCC...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACGGCAGGAGAACTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNGRRTA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAGTTCTCCTGCC...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACCTGGGAGGCGGACGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNLGGGR*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACGTCCGCCTCCCAG...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTATCACGCCACTGCACTaGAGCCTGGGCGACAGGGCA +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPITPLH*SLGDRA
Trigger: TGCCCTGTCGCCCAGGCTGCAGTGCAGTGGCGTGAT...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTCCGGGAGGTGGAGGTTaGAGTGAGGCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPPGGGG*SEARSR
Trigger: GCGTGATCTCGCCTCACTGCAACCTCCACCTCCCGG...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCAATGATACAGAGAAATaGTTGAGTGACAATAGCAGG +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTNDTEK*LSDNSR
Trigger: CCTGCTATTGTCACTCAACCATTTCTCTGTATCATT...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGGATTTACATGGGCACTaGGATCTGAATTTGCATTCC +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMDLHGH*DLNLHS
Trigger: GGAATGCAAATTCAGATCGCAGTGCCCATGTAAATC...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGGTCTGCTGCTGCCCTaGGGAGTAGCCGAATTGCTG +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPGLLLP*GVAELL
Trigger: CAGCAATTCGGCTACTCCCCAGGGCAGCAGCAGACC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCGTATTGCTGTATTGTTaGCTTATATCCACTACAGAT +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTVLLYC*LISTTD
Trigger: ATCTGTAGTGGATATAAGCCAACAATACAGCAATAC...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCCTACAGCTCAAAGGATaGTTTACCTATTTCATTTTC +
Preference number: 4 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTLQLKG*FTYFIF
Trigger: GAAAATGAAATAGGTAAACCATCCTTTGAGCTGTAG...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGTTGCCTGTGAATGTTTaGGTATTGCTGTATTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMLPVNV*VLLYCW
Trigger: CCAACAATACAGCAATACTCAAACATTCACAGGCAA...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACGGTGGGTGGATCACCTaGGGTCAGCTGTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNGGWIT*GQLFKT
Trigger: GGTTTTGAACAGCTGACCTCAGGTGATCCACCCACC...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTAGCTACTTGGGAGGCTaGGGCAGGAGTTGGAGACCA +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPSYLGG*GRSWRP
Trigger: TGGTCTCCAACTCCTGCCTCAGCCTCCCAAGTAGCT...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR CAA 72 bp GGAGATGAGAGATGTTCTTTTTGCAATGGAAGTGATTaGAGGCTGCTGGTAGCTATCTTCTTTGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GDERCSFCNGSD*RLLVAIFFGLK
Trigger: CTTGAGGCCAAAGAAGATAGCTACCAGCAGCCTCAAATCACTTCCATTGCAAAAAGAACATCTCTCATCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGATGGTGATGTGTCCATaGTTCAAGTTAATTAGGTCT +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMMVMCP*FKLIRS
Trigger: AGACCTAATTAACTTGAATCATGGACACATCACCAT...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTTTCATGCCATTCTCCTaGCTCAGCCTCCCGACTAGC +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPFMPFS*LSLPTS
Trigger: GCTAGTCGGGAGGCTGAGGCAGGAGAATGGCATGAA...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGGCATTTCCAAAATCCTaGCTTTCATGGAGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMAFPKS*LSWSFY
Trigger: ATAAAAGCTCCATGAAAGCCAGGATTTTGGAAATGC...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACAGAGGTAATTCAGGCTaGGTGCACTGCCTCACCCAT +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNRGNSG*VHCLTH
Trigger: ATGGGTGAGGCAGTGCACCCAGCCTGAATTACCTCT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTAGCCTCCCAAGTAGCTaGGATACAGGCACATGCCAC +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPSLPSS*DTGTCH
Trigger: GTGGCATGTGCCTGTATCCCAGCTACTTGGGAGGCT...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGAAACCAAATGGCCAATaGCACAAGAATTTTGATAAC +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMKPNGQ*HKNFDN
Trigger: GTTATCAAAATTCTTGTGGCATTGGCCATTTGGTTT...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGTTCATGTTAAACTCATaGTCTTTGCTTTCCTTTCAC +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMFMLNS*SLLSFH
Trigger: GTGAAAGGAAAGCAAAGAGCATGAGTTTAACATGAA...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGAAGAGCCTCACCATTTaGTTTTTGCCTAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMKSLTI*FLPKNK
Trigger: CTTATTTTTAGGCAAAAAGCAAATGGTGAGGCTCTT...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGAAATTTGTCTTCTCTTaGATTGATGGAGATGAGAGA +
Preference number: 4 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMKFVFS*IDGDER
Trigger: TCTCTCATCTCCATCAATCCAAGAGAAGACAAATTT...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGTAAACTCAGCACTGTaGGAGGCTGAGATGGGTGGA +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPVNSAL*EAEMGG
Trigger: TCCACCCATCTCAGCCTCCCACAGTGCTGAGTTTAC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACTATAATTATCAAGAATaGTGGAGGGCCGGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNYNYQE*WRAGRG
Trigger: ACCGCGCCCGGCCCTCCACCATTCTTGATAATTATA...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACCGAAAATTCTGTCGCTaGATATCAGGAGCCAAAGCC +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNRKFCR*ISGAKA
Trigger: GGCTTTGGCTCCTGATATGCAGCGACAGAATTTTCG...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACGAGGCTTTACCATATTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNEALPY*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAATATGGTAAAGCCTC...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGCAGTGGTGAGATCTTaGCTCACTGCAACCTTCACT +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPAVVRS*LTATFT
Trigger: AGTGAAGGTTGCAGTGAGCCAAGATCTCACCACTGC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGATGGGTGGATCATTTaGGATCATGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPDGWII*DHEFET
Trigger: GGTCTCGAACTCATGATCTCAAATGATCCACCCATC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACATGGGCACTGCGATCTaGATTTGCATTCCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNMGTAI*ICIPLK
Trigger: CTTTAAGGGAATGCAAATTCAGATCGCAGTGCCCAT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTAAAATGGGAGACCAGTaGTTACCAAAAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPKMGDQ*LPKGSR
Trigger: CCTGCTGCCTTTTGGTAATCACTGGTCTCCCATTTT...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACACATCCATGTCCATCTaGAGCTTGTATCTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNTSMSI*SLYLPE
Trigger: TTCAGGGAGATACAAGCTTCAGATGGACATGGATGT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGTCTCACTGTGGCCTTaGCCACAGTTAATTGGTTCA +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPVSLWP*PQLIGS
Trigger: TGAACCAATTAACTGTGGCCAAGGCCACAGTGAGAC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTTTCAAAATACAAAAATaGGCCAGGCGCGTGCCTGTA +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPFKIQK*ARRVPV
Trigger: TACAGGCACGCGCCTGGCTCATTTTTGTATTTTGAA...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACAAACAGTATTGTATGTaGGCTGGGTGTAGTGTCACA +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNKQYCM*AGCSVT
Trigger: TGTGACACTACACCCAGCTCACATACAATACTGTTT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTCCTGTCTCATTATGGTaGTGTGTCCATGATTCAAGT +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPPVSLW*CVHDSS
Trigger: ACTTGAATCATGGACACATCACCATAATGAGACAGG...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
3UTR CAA 72 bp TTAATAAAGGATTTACATGGGCACTGCGATCTGAATTaGCATTCCCTTAAAGCTATTTATGCCTGCATATCC +
Preference number: 4 (lower is better)
Translates to: LIKDLHGHCDLN*HSLKAIYACIS
Trigger: GGATATGCAGGCATAAATAGCTTTAAGGGAATGCAAATTCAGATCGCAGTGCCCATGTAAATCCTTTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGGTTCGAGAAGGGTATaGGACTTTAAATATTGTTGG +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPGSRRV*DFKYCW
Trigger: CCAACAATATTTAAAGTCTCATACCCTTCTCGAACC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACACTACTTACAGTGTATaGATCTTTCCTGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNTTYSV*IFPEDK
Trigger: TTTGTCCTCAGGAAAGATGCATACACTGTAAGTAGT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR GCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTTGTTGGGGTCATTTCTaGAAAACACAACTTGCCATA +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPCWGHF*KTQLAI
Trigger: TATGGCAAGTTGTGTTTTGCAGAAATGACCCCAACA...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR TCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTCCTATGAACTCTAAGTaGCTACAAAGCATTACTGTA +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPPMNSK*LQSITV
Trigger: TACAGTAATGCTTTGTAGTCACTTAGAGTTCATAGG...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTAAAGTTATGCTTAAATaGGTTTCTGGGGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPKVMLK*VSGASS
Trigger: ACTTGAAGCCCCAGAAACCCATTTAAGCATAACTTT...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CCA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGTTTCTTTTGTAAAATaGGAGACCAGTGATTACCAA +
Preference number: 4 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPVSFVK*ETSDYQ
Trigger: TTGGTAATCACTGGTCTCCCATTTTACAAAAGAAAC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS GCA 90 bp CTGCTCCCGTACGGCCTAGACCGGGGCCCGTACGGCGGCGTGTGGTaGGGACTCCCGTACCCGTCTCGAGGGGAGGGCGGCCGTGGTCCG +
Preference number: 5 (lower is better)
Translates to: LLPYGLDRGPYGGVW*GLPYPSRGEGGRGP
Trigger: CGGACCACGGCCGCCCTCCCCTCGAGACGGGTACGGGAGTCCGCACCACACGCCGCCGTACGGGCCCCGGTCTAGGCCGTACGGGAGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCTGGGGAGTAGCCGAATaGCTGCTGGGACCCCGCGGG +
Preference number: 5 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTWGVAE*LLGPRG
Trigger: CCCGCGGGGTCCCAGCAGCAATTCGGCTACTCCCCA...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCTGCAGTGGTGAGATCTaGGCTCACTGCAACCTTCAC +
Preference number: 5 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTCSGEI*AHCNLH
Trigger: GTGAAGGTTGCAGTGAGCCAAGATCTCACCACTGCA...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGCAGGGTAAGGAGGAGTaGGGGGCCGAAAATTCTGTC +
Preference number: 5 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMQGKEE*GAENSV
Trigger: GACAGAATTTTCGGCCCCCAACTCCTCCTTACCCTG...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGAGGCAGAAGAATTGCTaGAACCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMRQKNC*NPGGGG
Trigger: ACCTCCACCTCCCGGGTTCAAGCAATTCTTCTGCCT...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGAGGCAGGAGAATTGCTaGAACTTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMRQENC*NLGGRG
Trigger: ACCTCTGCCTCCCAAGTTCAAGCAATTCTCCTGCCT...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGCATGAGGTCAGGAGATaGAGACCATCCTGGCTAACA +
Preference number: 5 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMHEVRR*RPSWLT
Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATG...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCTTGTCTTCTCTTGGATaGATGGAGATGAGAGATGTT +
Preference number: 5 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTLSSLG*MEMRDV
Trigger: AACATCTCTCATCTCCATCAATCCAAGAGAAGACAA...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACAGGCTGAGGCAGGAGTaGGAGACCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNRLRQE*ETSLGN
Trigger: GTTGCCCAGGCTGGTCTCCAACTCCTGCCTCAGCCT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp CTTAATTATGGCAGTCAGAAGTTGGCTAAGGGGCCAAGCGTGGTGGCTCACACCTTGAGTATTGCTGTATaGTTGGCTTATATCCACTAC +
Preference number: 5 (lower is better)
Translates to: LNYGSQKLAKGPSVVAHTLSIAV*LAYIHY
Trigger: GTAGTGGATATAAGCCAACAATACAGCAATACTCAA...GGTGTGAGCCACCACGCTTGGCCCCTTAGCCAACTTCTGACTGCCATAATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp CCCAGTGGTGTTCAAGGTCACAGAATCCTGTCTCATTATGGTGATGTGTCCATGCACTGCGATCTGAATTaGCATTCCCTTAAAGCTATT +
Preference number: 5 (lower is better)
Translates to: PSGVQGHRILSHYGDVSMHCDLN*HSLKAI
Trigger: AATAGCTTTAAGGGAATGCAAATTCAGATCGCAGTG...CATGGACACATCACCATAATGAGACAGGATTCTGTGACCTTGAACACCACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTCGAGGCTTTACCATATaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPRGFTI*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAATATGGTAAAGCCTCG...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTAAGGTAGGGGATCACTaGAGACCAGGAGTTCAATCG +
Preference number: 5 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPKVGDH*RPGVQS
Trigger: CGATTGAACTCCTGGTCTCAAGTGATCCCCTACCTT...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGAGAATTGCTTGAACTaGGGAGGCAGAGGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPENCLN*GGRGCS
Trigger: ACTACAACCTCTGCCTCCCAAGTTCAAGCAATTCTC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACAACAGCTACCACTTATaGAGTGCTTACTATGTGCCA +
Preference number: 5 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNNSYHL*SAYYVP
Trigger: TGGCACATAGTAAGCACTCAATAAGTGGTAGCTGTT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACAGTATTGCTGTATTGTaGGCTTATATCCACTACAGA +
Preference number: 5 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNSIAVL*AYIHYR
Trigger: TCTGTAGTGGATATAAGCCAACAATACAGCAATACT...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGGAGGTGTGACCATTTaGTTTTTACACGTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPGGVTI*FLHVSF
Trigger: GAAAGAAACGTGTAAAAACAAAATGGTCACACCTCC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTGGAGTATGTAGACCCTaGTTTGAAGACTCTACTATA +
Preference number: 5 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPGVCRP*FEDSTI
Trigger: TATAGTAGAGTCTTCAAACAAGGGTCTACATACTCC...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp GATAACTCACTACCTTCCAACCAGGCGATTATGTGTCTTATTTACAGTAAAAACCTATGGTCATTTAGATaGTTGGCAATCTTTCAACTG +
Preference number: 5 (lower is better)
Translates to: DNSLPSNQAIMCLIYSKNLWSFR*LAIFQL
Trigger: CAGTTGAAAGATTGCCAACAATCTAAATGACCATAG...GTTTTTACTGTAAATAAGACACATAATCGCCTGGTTGGAAGGTAGTGAGTTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS-3UTR CAA 90 bp AGAGAAATTCAGATAGAACACTTTGATTTAGCAATGCATGGTCTATTCTTGCCTATAGCATCCCTTAATTaGGAAAACCACTTCTCTACT +
Preference number: 5 (lower is better)
Translates to: REIQIEHFDLAMHGLFLPIASLN*ENHFST
Trigger: AGTAGAGAAGTGGTTTTCCAAATTAAGGGATGCTAT...AGGCAAGAATAGACCATGCATTGCTAAATCAAAGTGTTCTATCTGAATTTCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS GCA 72 bp TACGGCCTAGACCGGGGCCCGTACGGCGGCGTGTGGTaGGGACTCCCGTACCCGTCTCGAGGGGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: YGLDRGPYGGVW*GLPYPSRGEGG
Trigger: GCCGCCCTCCCCTCGAGACGGGTACGGGAGTCCGCACCACACGCCGCCGTACGGGCCCCGGTCTAGGCCGTA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS CCA 72 bp CCGTACGGCCTAGACCGGGGCCCGTACGGCGGCGTGTaGTGCGGACTCCCGTACCCGTCTCGAGGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: PYGLDRGPYGGV*CGLPYPSRGEG
Trigger: GCCCTCCCCTCGAGACGGGTACGGGAGTCCGCACCACACGCCGCCGTACGGGCCCCGGTCTAGGCCGTACGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS CCA 72 bp CCAACCTCCTCCACCCGGACCAGGGTAAGGAGGAGTTaGGGGCCGAAAATTCTGTCGCTGCATATCAGGAGC +
Preference number: 6 (lower is better)
Translates to: PTSSTRTRVRRS*GPKILSLHIRS
Trigger: GCTCCTGATATGCAGCGACAGAATTTTCGGCCCCCAACTCCTCCTTACCCTGGTCCGGGTGGAGGAGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306984.8
CDS CAA 72 bp CCCAACCTCCTCCACCCGGACCAGGGTAAGGAGGAGTaGGGGGCCGAAAATTCTGTCGCTGCATATCAGGAG +
Preference number: 6 (lower is better)
Translates to: PNLLHPDQGKEE*GAENSVAAYQE
Trigger: CTCCTGATATGCAGCGACAGAATTTTCGGCCCCCAACTCCTCCTTACCCTGGTCCGGGTGGAGGAGGTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000306984.8