RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPL (Homo sapiens)

Ensembl gene IDs: ENSG00000117400

Ensembl transcript IDs: ENST00000372470.9, ENST00000413998.7, ENST00000638732.1, ENST00000643351.1

Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTGCCTGGGCAGTTTCACTAGCAAAGTGTAGTAGGGGAACTAATTaGAGTAGTCTCAAGAGTAAATGGGAAGTGTGGGGAAGTGGAGGC +
Preference number: 1 (lower is better)
Translates to: FAWAVSLAKCSRGTN*SSLKSKWEVWGSGG
Trigger: GCCTCCACTTCCCCACACTTCCCATTTACTCTTGAGACTACTTCAATTAGTTCCCCTACTACACTTTGCTAGTGAAACTGCCCAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR CCA 90 bp TTTATTGAAGGCCTACTATCATGCACCAAGCACTACTCTAGGTGCTaGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCAAGGAGC +
Preference number: 1 (lower is better)
Translates to: FIEGLLSCTKHYSRC*GKRTNKSCSFPSRS
Trigger: GCTCCTTGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTGCTTGGTGCATGATAGTAGGCCTTCAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR TCA 90 bp ACTCAAAGAGGCAGGACCAAGGTAGGAAAGAATTTAAAGGAGAAGTaGGTAGTCAGCCTTGACAAATCTTACAGCGAGATCAAAGGAACT +
Preference number: 1 (lower is better)
Translates to: TQRGRTKVGKNLKEK*VVSLDKSYSEIKGT
Trigger: AGTTCCTTTGATCTCGCTGTAAGATTTGTCAAGGCTGACTACTCACTTCTCCTTTAAATTCTTTCCTACCTTGGTCCTGCCTCTTTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR GCA 90 bp AAATTTATTGAAGGCCTACTATCATGCACCAAGCACTACTCTAGGTaGTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCAAGG +
Preference number: 1 (lower is better)
Translates to: KFIEGLLSCTKHYSR*WGKRTNKSCSFPSR
Trigger: CCTTGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTGCTTGGTGCATGATAGTAGGCCTTCAATAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR-3UTR CCA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGGATGGAGGTGAGGTCTaGGGTGCTTGTGTTGTGGGG +
Preference number: 2 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKDGGEV*GACVVG
Trigger: CCCCACAACACAAGCACCCCAGACCTCACCTCCATC...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR-3UTR TCA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGAGGAGCTTAGTGAAATaGGCCTGCCTGTGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKRSLVK*ACLWRK
Trigger: CTTTCTCCACAGGCAGGCTCATTTCACTAAGCTCCT...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR-3UTR CCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAAAGTAAATGGGAAGTGTaGGGAAGTGGAGGCTTGTTT +
Preference number: 2 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKSKWEV*GSGGLF
Trigger: AAACAAGCCTCCACTTCCCCACACTTCCCATTTACT...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR CAA 90 bp AATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATaGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: NLTARSKELMINEIL*DLGIRRFEVHFAWA
Trigger: TGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR-3UTR TCA 90 bp CACTACTCTAGGTGCTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCAAATTTAAAGGAGAAGTaGGTAGTCAGCCTTGACAAA +
Preference number: 2 (lower is better)
Translates to: HYSRCWGKRTNKSCSFPSNLKEK*VVSLDK
Trigger: TTTGTCAAGGCTGACTACTCACTTCTCCTTTAAATT...TGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR-3UTR CCA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATGTGGAGAAAGGGTCCTaGTTTTATGTCAGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: TNLTARSKELMINEILLDVEKGS*FYVSSS
Trigger: ACTGCTGCTGACATAAAACCAGGACCCTTTCTCCAC...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR CAA 90 bp TTATGTGCCCAAGGTTGCACAGCTAGTAAATGTGAAGGACAGGAATaGAATCCAGCTCTGATTCTAGATCTAGTTTATTCTCTTAACTAC +
Preference number: 2 (lower is better)
Translates to: LCAQGCTASKCEGQE*NPALILDLVYSLNY
Trigger: GTAGTTAAGAGAATAAACTAGATCTAGAATCAGAGCTGGATTCAATTCCTGTCCTTCACATTTACTAGCTGTGCAACCTTGGGCACATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR TCA 72 bp TTTTATGTCAGCAGCAGTAGAGTAAGATCAGTGCAATaGAGCCTAATTGTGAGGGCAGACAGAGGGGGATGG +
Preference number: 3 (lower is better)
Translates to: FYVSSSRVRSVQ*SLIVRADRGGW
Trigger: CCATCCCCCTCTGTCTGCCCTCACAATTAGGCTTCATTGCACTGATCTTACTCTACTGCTGCTGACATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR CCA 72 bp CTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTaGTTTTATGTCAGCAGCAGTAGAGTAAGATCAGTG +
Preference number: 3 (lower is better)
Translates to: LSEMSLPVEKGS*FYVSSSRVRSV
Trigger: CACTGATCTTACTCTACTGCTGCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR CCA 72 bp GGCCTACTATCATGCACCAAGCACTACTCTAGGTGCTaGGGGAAAAGGACAAATAAATCATGTTCCTTTCCC +
Preference number: 3 (lower is better)
Translates to: GLLSCTKHYSRC*GKRTNKSCSFP
Trigger: GGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTGCTTGGTGCATGATAGTAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR-3UTR CAA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTTGGGGAAGTGGAGGCTaGTTTTCAAGGCGTTTGACA +
Preference number: 3 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVWGSGG*FSRRLT
Trigger: TGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCA...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR-3UTR CAA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAAAGATCCTATTGGATCTaGGAATTAGAAGATTTGAGG +
Preference number: 3 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKRSYWI*ELEDLR
Trigger: CCTCAAATCTTCTAATTCCAAGATCCAATAGGATCT...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR CCA 72 bp GATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTaGGCAGTTTCACTAGCAAAGTGTAGTAGGGGAACT +
Preference number: 3 (lower is better)
Translates to: DLGIRRFEVHFA*AVSLAKCSRGT
Trigger: AGTTCCCCTACTACACTTTGCTAGTGAAACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR TCA 72 bp AGTTGCATAAAGCATCACAGTGCTGTAGTAGATGTCTaGGCTAGAGATAAGAACTTTGGAATGGTCAACATA +
Preference number: 3 (lower is better)
Translates to: SCIKHHSAVVDV*ARDKNFGMVNI
Trigger: TATGTTGACCATTCCAAAGTTCTTATCTCTAGCTCAGACATCTACTACAGCACTGTGATGCTTTATGCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTGGGAGGCGCACAGCCTaGTGGATCCAGAAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSGRRTA*WIQKGE
Trigger: CTCCCCTTTCTGGATCCACCAGGCTGTGCGCCTCCC...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp TTGTGTTGTGGGGGTAGGGTAGGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCACTTGGGCCAGGTTTTaGGGGGCCAGGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LCCGGRVGKFTEKSREFSTWARF*GARRRQ
Trigger: CTGCCTCCTCCTGGCCCCTCAAAACCTGGCCCAAGT...GCTAAACTCTCGAGACTTCTCTGTGAACTTCCCTACCCTACCCCCACAACACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAAGGTACAGCAGGACCCTaGCTCAGCCATGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKGTAGP*LSHGWA
Trigger: TGCCCACCCATGGCTGAGTCAGGGTCCTGCTGTACC...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCTGGCCTAGGACCCGGTaGAGGTCTGGAAGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSWPRTR*RSGSEG
Trigger: GCCCTCACTTCCAGACCTGCACCGGGTCCTAGGCCA...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAAAGGCGCACAGCCTGGTaGATCCAGAAAGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKRRTAW*IQKGEP
Trigger: GGGCTCCCCTTTCTGGATCCACCAGGCTGTGCGCCT...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp TTGTGTTGTGGGGGTAGGGTAGGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCCCTCCAGTGCAAGTTTaGGGTGGGGAGGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: LCCGGRVGKFTEKSREFSPPVQV*GGEAHS
Trigger: GCTGTGCGCCTCCCCACCCCAAACTTGCACTGGAGG...GCTAAACTCTCGAGACTTCTCTGTGAACTTCCCTACCCTACCCCCACAACACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCCTGGCTCCTCCCAGCTaGTCTGAAGTTCCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSLAPPS*SEVPLA
Trigger: AGCCAGGGGAACTTCAGATCAGCTGGGAGGAGCCAG...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCCAGGGCATTGTGGGCTaGGCACATGGAGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSQGIVG*AHGDWS
Trigger: GGACCAGTCTCCATGTGCTCAGCCCACAATGCCCTG...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp CACTACTCTAGGTGCTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCAGGTAGGTGGGGCCGTTaGGCCTGGCGCGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: HYSRCWGKRTNKSCSFPSGRWGR*AWRAAV
Trigger: TACAGCTGCGCGCCAGGCTCAACGGCCCCACCTACC...TGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAAACAGGTCTCTTGGGCTaGCCAGGACGATGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKTGLLG*PGRWVL
Trigger: CAGCACCCATCGTCCTGGGCAGCCCAAGAGACCTGT...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTCTGAGATCGCGCCATTaGACTGCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSLRSRH*TAAWVT
Trigger: TGTCACCCAGGCTGCAGTGCAATGGCGCGATCTCAG...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCGTGTCCCTAAGGTACTaGCCTAGGACCCGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSVSLRY*PRTRCR
Trigger: CCTGCACCGGGTCCTAGGCCAGTACCTTAGGGACAC...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTGGCCCAGGACGGCGCTaGGGCCCAGCACTAGATGCA +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVGPGRR*GPALDA
Trigger: TGCATCTAGTGCTGGGCCTCAGCGCCGTCCTGGGCC...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAAGCAGCCAGTAGGAGTTaGCAGGCTGGAGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKAASRS*QAGVLR
Trigger: TCTCAGGACTCCAGCCTGGCAACTCCTACTGGCTGC...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp TTGTGTTGTGGGGGTAGGGTAGGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCGGCAGCACCGTGCCCTaGTGTGGTAGAAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LCCGGRVGKFTEKSREFSGSTVP*CGRRSL
Trigger: AAGGCTTCTTCTACCACAGCAGGGCACGGTGCTGCC...GCTAAACTCTCGAGACTTCTCTGTGAACTTCCCTACCCTACCCCCACAACACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAATCTGGGGCAGCACCGTaGCCTGCTGTGGTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKSGAAP*PAVVEE
Trigger: TTCTTCTACCACAGCAGGGCACGGTGCTGCCCCAGA...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAACCGAGATCGTGCCACTaGACTCCAGTCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKPRSCH*TPVWQQ
Trigger: CTGTTGCCAGACTGGAGTGCAGTGGCACGATCTCGG...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTGACCAGTGGAGTTCTTaGGATCTCTGGGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSDQWSS*DLWGHS
Trigger: GCTATGGCCCCAGAGATCCCAAGAACTCCACTGGTC...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTCTTGCCAGGGCATTGTaGGCTGAGCACATGGAGACT +
Preference number: 4 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSLARAL*AEHMET
Trigger: AGTCTCCATGTGCTCAGCCCACAATGCCCTGGCAAG...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp CACTACTCTAGGTGCTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCATGGGGTACCTGTCTCTaGGGCAGCACCGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HYSRCWGKRTNKSCSFPSWGTCL*GSTVPC
Trigger: GCAGGGCACGGTGCTGCCCCAGAGACAGGTACCCCA...TGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp TTGTGTTGTGGGGGTAGGGTAGGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCACACAGACAGGGGCATaGTCCCCAGGCAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LCCGGRVGKFTEKSREFSTQTGA*SPGKKA
Trigger: AGCCTTCTTGCCTGGGGACCATGCCCCTGTCTGTGT...GCTAAACTCTCGAGACTTCTCTGTGAACTTCCCTACCCTACCCCCACAACACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAAGATGGAGGTGAGGTCTaGGGTGCTTGTGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKDGGEV*GACVVG
Trigger: CCCCACAACACAAGCACCCCAGACCTCACCTCCATC...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp TTGTGTTGTGGGGGTAGGGTAGGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTGGCAATCAGCTGTATaGCCGTGGGACCAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: LCCGGRVGKFTEKSREFSWQSAV*PWDQWS
Trigger: ACTCCACTGGTCCCACGGTCATACAGCTGATTGCCA...GCTAAACTCTCGAGACTTCTCTGTGAACTTCCCTACCCTACCCCCACAACACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCTTCTTCACAGGTATCTaGGACTGTGGCCTTGGGCGG +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSFFTGI*DCGLGR
Trigger: CCGCCCAAGGCCACAGTCTCAGATACCTGTGAAGAA...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGTCCCATCAGGTTCGCTaGGCAGCTGCAGCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKSHQVR*AAAASR
Trigger: CCTACTGGCTGCAGCTGCGCAGCGAACCTGATGGGA...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAAGCATTGCAGTCCAAGTaGCACTGCATCTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKALQSK*HCISRQ
Trigger: CTGCCTGGAGATGCAGTGGCACTTGGACTGCAATGC...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAAAGCAAGGAGACATCTTaGCTGCTGACTTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKSKETS*LLTWAR
Trigger: CCTGGCCCAAGTCAGCAGCCAAGATGTCTCCTTGCT...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCGGTTGGCAATGTGGGTaGTACAGCAGGACCCTGACT +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSGWQCG*YSRTLT
Trigger: AGTCAGGGTCCTGCTGTACCACCCACATTGCCAACC...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGGAGGCTGAGGCAGAATaGCTTGAACCCGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKEAEAE*LEPGRQ
Trigger: CTGCCTCCCGGGTTCAAGCCATTCTGCCTCAGCCTC...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCGTACTCCCAGCTACTTaGGAGGCTGAGGCAGAATGG +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSVLPAT*EAEAEW
Trigger: CCATTCTGCCTCAGCCTCCCAAGTAGCTGGGAGTAC...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCACAAAGAGGACTCGCTaGGTCCGAGTCTGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSTKRTR*VRVWFR
Trigger: CCTAAACCAGACTCGGACTCAGCGAGTCCTCTTTGT...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTACCTCAGGAAATCACTaGTTTCTGGAGCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSTSGNH*FLELAP
Trigger: AGGAGCCAGCTCCAGAAATCAGTGATTTCCTGAGGT...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCAGCACCTTCCAGTCCTaGTGGCCTTCTCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSSTFQS*WPSPVY
Trigger: ATACACAGGAGAAGGCCATCAGGACTGGAAGGTGCT...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTGTGCAGGTCTGGAAGTaGGGGCCACAGGGCATGCCT +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVVQVWK*GPQGMP
Trigger: AGGCATGCCCTGTGGCCCTCACTTCCAGACCTGCAC...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGTGTCCCACTGGGCGCTaGCTCTTCCTCATCCCAGAA +
Preference number: 4 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKCPTGR*LFLIPE
Trigger: TTCTGGGATGAGGAAGAGGCAGCGCCCAGTGGGACA...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAACTACTTGGGGAGGTCTaGTTTGGTCCATCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKLLGEV*FGPSCQ
Trigger: CTGGCAAGATGGACCAAAGCAGACCTCCCCAAGTAG...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp TTGTGTTGTGGGGGTAGGGTAGGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCCACTCCAATTCCAGATaGCCACTGGAGATCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LCCGGRVGKFTEKSREFSHSNSR*PLEISL
Trigger: GAGGGAGATCTCCAGTGGGCATCTGGAATTGGAGTG...GCTAAACTCTCGAGACTTCTCTGTGAACTTCCCTACCCTACCCCCACAACACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGGCCCAGGACGATGGGTaGTGCCACTCCAATTCCAGA +
Preference number: 4 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKAQDDG*CHSNSR
Trigger: TCTGGAATTGGAGTGGCAGCACCCATCGTCCTGGGC...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCTCCTGGTCTGGAAACTaGCACACGTATCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSSWSGN*HTYRVP
Trigger: TGGAACCCGATACGTGTGCCAGTTTCCAGACCAGGA...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCCACTTCCTCCTGGTCTaGAAACTGGCACACGTATCG +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSHFLLV*KLAHVS
Trigger: CGATACGTGTGCCAGTTTCCAGACCAGGAGGAAGTG...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp CACTACTCTAGGTGCTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCAGATCTGAAGTTCCCCTaGCTGGCTCCCACCCATGGC +
Preference number: 4 (lower is better)
Translates to: HYSRCWGKRTNKSCSFPSDLKFP*LAPTHG
Trigger: GCCATGGGTGGGAGCCAGCCAGGGGAACTTCAGATC...TGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTGAAATCACTGATTTCTaGAGCTGGCTCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSEITDF*SWLLPA
Trigger: AGCTGGGAGGAGCCAGCTCCAGAAATCAGTGATTTC...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAAATTCCAGATGCCCACTaGAGATCTCCCTCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKIPDAH*RSPSSA
Trigger: TGCACTGGAGGGAGATCTCCAGTGGGCATCTGGAAT...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GTAGTAGGGGAACTAATTGAAGTAGTCTCAAGAGTAAATGGGAAGTGTGGGGAATCCTCCCAGCTGATCTaGAGTTCCCCTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VVGELIEVVSRVNGKCGESSQLI*SSPGWL
Trigger: GAGCCAGCCAGGGGAACTTCAGATCAGCTGGGAGGA...TTCCCCACACTTCCCATTTACTCTTGAGACTACTTCAATTAGTTCCCCTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTTGTCATTTCGTGACTTaGAGTGGCAGCGAGAGAACT +
Preference number: 4 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSCHFVT*SGSERT
Trigger: AGTTCTCTCGCTGCCACTTCAAGTCACGAAATGACA...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCAGGAGCTTAGTGAAATaGGCCTGCCTGTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSRSLVK*ACLWRK
Trigger: CTTTCTCCACAGGCAGGCTCATTTCACTAAGCTCCT...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGCAGGACGATGGGTGCTaGCACTCCAATTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKQDDGC*HSNSRC
Trigger: GCATCTGGAATTGGAGTGGCAGCACCCATCGTCCTG...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGTGGGGAGGTCTGCTTTaGTCCATCTTGCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKWGGLL*SILPGH
Trigger: ATGCCCTGGCAAGATGGACCAAAGCAGACCTCCCCA...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTCGCAGTTCTCCCAGATaGGGTACCTGTCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVRSSPR*GTCLWG
Trigger: GCCCCAGAGACAGGTACCCCATCTGGGAGAACTGCG...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTGGCTGCCCAGGACGATaGGTGCTGCCACTCCAATTC +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVGCPGR*VLPLQF
Trigger: GAATTGGAGTGGCAGCACCCATCGTCCTGGGCAGCC...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTACCCTGACTCAGCCATaGGTGGGCACACAGACAGGG +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVTLTQP*VGTQTG
Trigger: CCCTGTCTGTGTGCCCACCCATGGCTGAGTCAGGGT...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCAATGCTGTCATTTCGTaGCTTGAAGTGGCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSNAVIS*LEVAAR
Trigger: TCTCGCTGCCACTTCAAGTCACGAAATGACAGCATT...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp GTAGTAGGGGAACTAATTGAAGTAGTCTCAAGAGTAAATGGGAAGTGTGGGGAAAGGCCCAGCACTAGATaGAGAGCGGTCACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VVGELIEVVSRVNGKCGERPSTR*RAVTKE
Trigger: CTCCTTGGTGACCGCTCTGCATCTAGTGCTGGGCCT...TTCCCCACACTTCCCATTTACTCTTGAGACTACTTCAATTAGTTCCCCTACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTCAGTACCCGGGGCTGTaGTCACCTCCACAAGGATGT +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVQYPGL*SPPQGC
Trigger: ACATCCTTGTGGAGGTGACCACAGCCCCGGGTACTG...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGGGAAGTGTGGGGAAGTaGAGGCTTGTTTTCAAGGCG +
Preference number: 4 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKGSVGK*RLVFKA
Trigger: CGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCC...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp CACTACTCTAGGTGCTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCAAGACATCTTGGCTGCTaGCTTGGGCCAGGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: HYSRCWGKRTNKSCSFPSRHLGC*LGPGFE
Trigger: CTCAAAACCTGGCCCAAGTCAGCAGCCAAGATGTCT...TGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATGTCCAGAGCAGAGGCTaGGTGAGGCCTCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TNLTARSKELMINEILLDVQSRG*VRPLQS
Trigger: GCTCTGCAGAGGCCTCACTCAGCCTCTGCTCTGGAC...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp TTGTGTTGTGGGGGTAGGGTAGGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCGTAAGATCAGTGCAATaGAGCCTAATTGTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCCGGRVGKFTEKSREFSVRSVQ*SLIVRA
Trigger: TGCCCTCACAATTAGGCTTCATTGCACTGATCTTAC...GCTAAACTCTCGAGACTTCTCTGTGAACTTCCCTACCCTACCCCCACAACACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp TTGTGTTGTGGGGGTAGGGTAGGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCAAGCACTACTCTAGGTaGTGGGGGAAAAGGACAAAT +
Preference number: 4 (lower is better)
Translates to: LCCGGRVGKFTEKSREFSKHYSR*WGKRTN
Trigger: ATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTGCTT...GCTAAACTCTCGAGACTTCTCTGTGAACTTCCCTACCCTACCCCCACAACACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GTAGTAGGGGAACTAATTGAAGTAGTCTCAAGAGTAAATGGGAAGTGTGGGGAAAGACGCACTTCCTCCTaGTCTGGAAACTGGCACACG +
Preference number: 4 (lower is better)
Translates to: VVGELIEVVSRVNGKCGERRTSS*SGNWHT
Trigger: CGTGTGCCAGTTTCCAGACCAGGAGGAAGTGCGTCT...TTCCCCACACTTCCCATTTACTCTTGAGACTACTTCAATTAGTTCCCCTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp CACTACTCTAGGTGCTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCAACTGATTTCTGGAGCTaGCTCCTCCCAGCTGATCTG +
Preference number: 4 (lower is better)
Translates to: HYSRCWGKRTNKSCSFPSTDFWS*LLPADL
Trigger: CAGATCAGCTGGGAGGAGCCAGCTCCAGAAATCAGT...TGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp CACTACTCTAGGTGCTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCAAGTTCTTGGGATCTCTaGGGCCATAGCGGAGTTCGT +
Preference number: 4 (lower is better)
Translates to: HYSRCWGKRTNKSCSFPSSSWDL*GHSGVR
Trigger: ACGAACTCCGCTATGGCCCCAGAGATCCCAAGAACT...TGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp CACTACTCTAGGTGCTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCAGAATGGTTGGCAATGTaGGTGGTACAGCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: HYSRCWGKRTNKSCSFPSEWLAM*VVQQDP
Trigger: AGGGTCCTGCTGTACCACCCACATTGCCAACCATTC...TGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp TTGTGTTGTGGGGGTAGGGTAGGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCAGTCTCAAGAGTAAATaGGAAGTGTGGGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: LCCGGRVGKFTEKSREFSSLKSK*EVWGSG
Trigger: TCCACTTCCCCACACTTCCCATTTACTCTTGAGACT...GCTAAACTCTCGAGACTTCTCTGTGAACTTCCCTACCCTACCCCCACAACACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GTAGTAGGGGAACTAATTGAAGTAGTCTCAAGAGTAAATGGGAAGTGTGGGGAACATCCCAGAAGCAAGTaGGGTCCTCAAATGTTCGGG +
Preference number: 4 (lower is better)
Translates to: VVGELIEVVSRVNGKCGEHPRSK*GPQMFG
Trigger: CCCGAACATTTGAGGACCTCACTTGCTTCTGGGATG...TTCCCCACACTTCCCATTTACTCTTGAGACTACTTCAATTAGTTCCCCTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GTAGTAGGGGAACTAATTGAAGTAGTCTCAAGAGTAAATGGGAAGTGTGGGGAACAAAGGAGTCCTCTCTaGGGACTTGGGGAGGATTTC +
Preference number: 4 (lower is better)
Translates to: VVGELIEVVSRVNGKCGEQRSPL*GLGEDF
Trigger: GAAATCCTCCCCAAGTCCTCAGAGAGGACTCCTTTG...TTCCCCACACTTCCCATTTACTCTTGAGACTACTTCAATTAGTTCCCCTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTCAGTCTCCTGTAGTGTaGAGGAAACTGCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVQSPVV*RKLPPQ
Trigger: CTGAGGTGGCAGTTTCCTGCACACTACAGGAGACTG...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATAGTGCAAGTTTGGGGTaGGGAGGCGCACAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TNLTARSKELMINEILLDSASLG*GGAQPG
Trigger: ACCAGGCTGTGCGCCTCCCCACCCCAAACTTGCACT...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATGGTCTCCACCCTAGTTaGGTCCGACCACGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TNLTARSKELMINEILLDGLHPS*VRPRAP
Trigger: TGGAGCTCGTGGTCGGACCCAACTAGGGTGGAGACC...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATAGGTATCTGAGACTGTaGCCTTGGGCGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TNLTARSKELMINEILLDRYLRL*PWAGSG
Trigger: CCCTGAGCCCGCCCAAGGCCACAGTCTCAGATACCT...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp TCAGGATATCGAGACCATCCTGGCCAACGTGGTGAAAACCGGTCTCTCCTAAAACACTACTCTAGGTGCTaGGGGAAAAGGACAAATAAA +
Preference number: 4 (lower is better)
Translates to: SGYRDHPGQRGENRSLLKHYSRC*GKRTNK
Trigger: TTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG...TTTTAGGAGAGACCGGTTTTCACCACGTTGGCCAGGATGGTCTCGATATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCTTATGTGCCCAAGGTTaGACAGCTAGTAAATGTGAA +
Preference number: 4 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSLCAQG*TASKCE
Trigger: TTCACATTTACTAGCTGTGCAACCTTGGGCACATAA...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATAAGTGGGGCATGCTCTaGGAACTCAGGGGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: TNLTARSKELMINEILLDKWGML*ELRGQA
Trigger: TGCTTGCCCCCTGAGTTCCCAGAGCATGCCCCACTT...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTTTTCGTGACTTGAAGTaGCAGCGAGAGAACTGTGGG +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVFRDLK*QRENCG
Trigger: CCCACAGTTCTCTCGCTGCCACTTCAAGTCACGAAA...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTGTAGGTAGGAATGGTTaGCAATGTGGGTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVVGRNG*QCGWYS
Trigger: GCTGTACCACCCACATTGCCAACCATTCCTACCTAC...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp GTAGTAGGGGAACTAATTGAAGTAGTCTCAAGAGTAAATGGGAAGTGTGGGGAATCCTGTTGCTGCCATTaGCAGGTAACATTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VVGELIEVVSRVNGKCGESCCCH*QVTFFR
Trigger: CCTGAAGAATGTTACCTGTCAATGGCAGCAACAGGA...TTCCCCACACTTCCCATTTACTCTTGAGACTACTTCAATTAGTTCCCCTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR GCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTTCCAAGGTAAAGCATTaGAGTCCAAGTGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVSKVKH*SPSATA
Trigger: TGCAGTGGCACTTGGACTGCAATGCTTTACCTTGGA...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATTGTGGGCTGAGCACATaGAGACTGGTCCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: TNLTARSKELMINEILLDCGLST*RLVQSR
Trigger: TCTGCTCTGGACCAGTCTCCATGTGCTCAGCCCACA...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTGTGGAGAAAGGGTCCTaGTTTTATGTCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVVEKGS*FYVSSS
Trigger: ACTGCTGCTGACATAAAACCAGGACCCTTTCTCCAC...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATCTCTGCTGTCAGAGCTaGAGCTTCTCTACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TNLTARSKELMINEILLDLCCQS*SFSTWG
Trigger: TCCCCAAGTAGAGAAGCTTCAGCTCTGACAGCAGAG...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp CACTACTCTAGGTGCTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCAACCTCCACAAGGATGTaGATAATGCTGTCATTTCGT +
Preference number: 4 (lower is better)
Translates to: HYSRCWGKRTNKSCSFPSTSTRM*IMLSFR
Trigger: ACGAAATGACAGCATTATTCACATCCTTGTGGAGGT...TGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATTATCGGGTTCCAAAGTaGGGCATGCTCTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: TNLTARSKELMINEILLDYRVPK*GMLWEL
Trigger: GAGTTCCCAGAGCATGCCCCACTTTGGAACCCGATA...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GTAGTAGGGGAACTAATTGAAGTAGTCTCAAGAGTAAATGGGAAGTGTGGGGAAAGTAAATGGGAAGTGTaGGGAAGTGGAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: VVGELIEVVSRVNGKCGESKWEV*GSGGLF
Trigger: AAACAAGCCTCCACTTCCCCACACTTCCCATTTACT...TTCCCCACACTTCCCATTTACTCTTGAGACTACTTCAATTAGTTCCCCTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATGGATTTCAAGGAGGCTaGGTTCCACTTCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: TNLTARSKELMINEILLDGFQGG*VPLLHR
Trigger: CCTGTGAAGAAGTGGAACCCAGCCTCCTTGAAATCC...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGGAGAATAGATGGGATTaGAGACTGTTAAGAAATGGA +
Preference number: 4 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKENRWD*RLLRNG
Trigger: TCCATTTCTTAACAGTCTCCAATCCCATCTATTCTC...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CCA 90 bp GTAGTAGGGGAACTAATTGAAGTAGTCTCAAGAGTAAATGGGAAGTGTGGGGAAAAGGCAGAGAATAGATaGGATTGGAGACTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: VVGELIEVVSRVNGKCGEKAENR*DWRLLR
Trigger: TCTTAACAGTCTCCAATCCCATCTATTCTCTGCCTT...TTCCCCACACTTCCCATTTACTCTTGAGACTACTTCAATTAGTTCCCCTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR TCA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTAATTTAAAGGAGAAGTaGGTAGTCAGCCTTGACAAA +
Preference number: 4 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVNLKEK*VVSLDK
Trigger: TTTGTCAAGGCTGACTACTCACTTCTCCTTTAAATT...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR CAA 72 bp GCGAGATCAAAGGAACTGATGATTAACGAGATCCTATaGGATCTTGGAATTAGAAGATTTGAGGTGCACTTT +
Preference number: 4 (lower is better)
Translates to: ARSKELMINEIL*DLGIRRFEVHF
Trigger: AAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
3UTR CAA 72 bp CAAGGTTGCACAGCTAGTAAATGTGAAGGACAGGAATaGAATCCAGCTCTGATTCTAGATCTAGTTTATTCT +
Preference number: 4 (lower is better)
Translates to: QGCTASKCEGQE*NPALILDLVYS
Trigger: AGAATAAACTAGATCTAGAATCAGAGCTGGATTCAATTCCTGTCCTTCACATTTACTAGCTGTGCAACCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS CCA 90 bp GAGTGTAAGGAGCCGCGGCGAGTCCCAGAGGTGACGTGCAGGAAGTaGCGAAGCCGTAGGTGCGCACGGGCGGTGGACGGAGATCTGGGG +
Preference number: 5 (lower is better)
Translates to: ECKEPRRVPEVTCRK*RSRRCARAVDGDLG
Trigger: CCCCAGATCTCCGTCCACCGCCCGTGCGCACCTACGGCTTCGCCACTTCCTGCACGTCACCTCTGGGACTCGCCGCGGCTCCTTACACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS TCA 90 bp TTGGGTCCGACCACGAGCTCCAGGGACCTTGGTAGGTGGGGCCGTTaGGCCTGGCGCGCAGCTGTAAACGGTAGCGAGATCGCGGGCGCA +
Preference number: 5 (lower is better)
Translates to: LGPTTSSRDLGRWGR*AWRAAVNGSEIAGA
Trigger: TGCGCCCGCGATCTCGCTACCGTTTACAGCTGCGCGCCAGGCTCAACGGCCCCACCTACCAAGGTCCCTGGAGCTCGTGGTCGGACCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 90 bp CGGCGAGTCCCAGAGGTGACGTGCAGGAAGTGGCGAAGCCGTAGGTaGGCACGGGCGGTGGACGGAGATCTGGGGTCACAGAGCGAACCA +
Preference number: 5 (lower is better)
Translates to: RRVPEVTCRKWRSRR*ARAVDGDLGSQSEP
Trigger: TGGTTCGCTCTGTGACCCCAGATCTCCGTCCACCGCCCGTGCGCACCTACGGCTTCGCCACTTCCTGCACGTCACCTCTGGGACTCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS CCA 90 bp CACCAAGGAGATCCAGGCGGTCTCGGTGGCGGTCTCCACCCTAGTTaGGTCCGACCACGAGCTCCAGGGACCTTGGTAGGTGGGGCCGTT +
Preference number: 5 (lower is better)
Translates to: HQGDPGGLGGGLHPS*VRPRAPGTLVGGAV
Trigger: AACGGCCCCACCTACCAAGGTCCCTGGAGCTCGTGGTCGGACCCAACTAGGGTGGAGACCGCCACCGAGACCGCCTGGATCTCCTTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 90 bp GGGCTCAGGGCTGCAGTGTCCCTAAGGTACTGGCCTAGGACCCGGTaGAGGTCTGGAAGTGAGGGCCACAGGGCATGCCTCAGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLRAAVSLRYWPRTR*RSGSEGHRACLSLL
Trigger: CAGGAGACTGAGGCATGCCCTGTGGCCCTCACTTCCAGACCTGCACCGGGTCCTAGGCCAGTACCTTAGGGACACTGCAGCCCTGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372470.9
ENST00000413998.7
CDS GCA 90 bp CCTGTTTACAGGCCTTCGGCTCCACCTGGTCCACCGCCAGTCTCCTaGCTGGCGGGGGCGGTACCTGTAGTGTGCAGGAAACTGCCACCT +
Preference number: 5 (lower is better)
Translates to: PVYRPSAPPGPPPVS*LAGAVPVVCRKLPP
Trigger: AGGTGGCAGTTTCCTGCACACTACAGGTACCGCCCCCGCCAGGCAGGAGACTGGCGGTGGACCAGGTGGAGCCGAAGGCCTGTAAACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS GCA 90 bp ACCAGGATCCCCAGGAGCCACCGAGGGAGATCCCATCAGGTTCGCTaGGCAGCTGCAGCCAGTAGGAGTTGCCAGGCTGGAGTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: TRIPRSHRGRSHQVR*AAAASRSCQAGVLR
Trigger: TCTCAGGACTCCAGCCTGGCAACTCCTACTGGCTGCAGCTGCGCAGCGAACCTGATGGGATCTCCCTCGGTGGCTCCTGGGGATCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 90 bp CACGGGCGGTGGACGGAGATCTGGGGTCACAGAGCGAACCAAGAATaGCTGTTTACAGGCCTTCGGCTCCACCTGGTCCACCGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: HGRWTEIWGHRANQE*LFTGLRLHLVHRQS
Trigger: AGACTGGCGGTGGACCAGGTGGAGCCGAAGGCCTGTAAACAGGCATTCTTGGTTCGCTCTGTGACCCCAGATCTCCGTCCACCGCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS CCA 90 bp ACAGAGCGAACCAAGAATGCCTGTTTACAGGCCTTCGGCTCCACCTaGTCCACCGCCAGTCTCCTGCCTGGCGGGGGCGGTACCTGTAGT +
Preference number: 5 (lower is better)
Translates to: TERTKNACLQAFGST*STASLLPGGGGTCS
Trigger: ACTACAGGTACCGCCCCCGCCAGGCAGGAGACTGGCGGTGGACCAGGTGGAGCCGAAGGCCTGTAAACAGGCATTCTTGGTTCGCTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS CCA 90 bp GGAAGTGGCGAAGCCGTAGGTGCGCACGGGCGGTGGACGGAGATCTaGGGTCACAGAGCGAACCAAGAATGCCTGTTTACAGGCCTTCGG +
Preference number: 5 (lower is better)
Translates to: GSGEAVGAHGRWTEI*GHRANQECLFTGLR
Trigger: CCGAAGGCCTGTAAACAGGCATTCTTGGTTCGCTCTGTGACCCCAGATCTCCGTCCACCGCCCGTGCGCACCTACGGCTTCGCCACTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS GCA 90 bp TCTTGGGCTGCCCAGGACGATGGGTGCTGCCACTCCAATTCCAGATaGCCACTGGAGATCTCCCTCCAGTGCAAGTTTGGGGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: SWAAQDDGCCHSNSR*PLEISLQCKFGVGR
Trigger: CCTCCCCACCCCAAACTTGCACTGGAGGGAGATCTCCAGTGGGCATCTGGAATTGGAGTGGCAGCACCCATCGTCCTGGGCAGCCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 90 bp AGCAGGACCCTGACTCAGCCATGGGTGGGCACACAGACAGGGGCATaGTCCCCAGGCAAGAAGGCTGCAATCTTCGGTAGTCCATCTGGG +
Preference number: 5 (lower is better)
Translates to: SRTLTQPWVGTQTGA*SPGKKAAIFGSPSG
Trigger: CCCAGATGGACTACCGAAGATTGCAGCCTTCTTGCCTGGGGACCATGCCCCTGTCTGTGTGCCCACCCATGGCTGAGTCAGGGTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS TCA 90 bp GCCTCTGCAGAGCAGGGCAGCAGGTTTCTGTGGCAATCAGCTGTATaGCCGTGGGACCAGTGGAGTTCTTGGGATCTCTGGGGCCATAGC +
Preference number: 5 (lower is better)
Translates to: ASAEQGSRFLWQSAV*PWDQWSSWDLWGHS
Trigger: GCTATGGCCCCAGAGATCCCAAGAACTCCACTGGTCCCACGGTCATACAGCTGATTGCCACAGAAACCTGCTGCCCTGCTCTGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 90 bp CTCCCGCGGGTAGGCATACAGCAGCTGGTATGTCCCACTGGGCGCTaGCTCTTCCTCATCCCAGAAGCAAGTGAGGTCCTCAAATGTTCG +
Preference number: 5 (lower is better)
Translates to: LPRVGIQQLVCPTGR*LFLIPEASEVLKCS
Trigger: CGAACATTTGAGGACCTCACTTGCTTCTGGGATGAGGAAGAGGCAGCGCCCAGTGGGACATACCAGCTGCTGTATGCCTACCCGCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS TCA 90 bp GTCCATCTGGGCCTGGGAGGAACACAGGGGCAAAGGAGTCCTCTCTaGGGACTTGGGGAGGATTTCAAGGAGGCTGGGTTCCACTTCTTC +
Preference number: 5 (lower is better)
Translates to: VHLGLGGTQGQRSPL*GLGEDFKEAGFHFF
Trigger: GAAGAAGTGGAACCCAGCCTCCTTGAAATCCTCCCCAAGTCCTCAGAGAGGACTCCTTTGCCCCTGTGTTCCTCCCAGGCCCAGATGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS CCA 90 bp GCCATAGCGGAGTTCGTACCTCAGGAAATCACTGATTTCTGGAGCTaGCTCCTCCCAGCTGATCTGAAGTTCCCCTGGCTGGCTCCCACC +
Preference number: 5 (lower is better)
Translates to: AIAEFVPQEITDFWS*LLPADLKFPWLAPT
Trigger: GGTGGGAGCCAGCCAGGGGAACTTCAGATCAGCTGGGAGGAGCCAGCTCCAGAAATCAGTGATTTCCTGAGGTACGAACTCCGCTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 90 bp CTCTACTTGGGGAGGTCTGCTTTGGTCCATCTTGCCAGGGCATTGTaGGCTGAGCACATGGAGACTGGTCCAGAGCAGAGGCTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: LYLGRSALVHLARAL*AEHMETGPEQRLSE
Trigger: CTCACTCAGCCTCTGCTCTGGACCAGTCTCCATGTGCTCAGCCCACAATGCCCTGGCAAGATGGACCAAAGCAGACCTCCCCAAGTAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 90 bp AGGTGCAGCGGAAAGAAGAGACGCACTTCCTCCTGGTCTGGAAACTaGCACACGTATCGGGTTCCAAAGTGGGGCATGCTCTGGGAACTC +
Preference number: 5 (lower is better)
Translates to: RCSGKKRRTSSWSGN*HTYRVPKWGMLWEL
Trigger: GAGTTCCCAGAGCATGCCCCACTTTGGAACCCGATACGTGTGCCAGTTTCCAGACCAGGAGGAAGTGCGTCTCTTCTTTCCGCTGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 90 bp TCTGGGGCCATAGCGGAGTTCGTACCTCAGGAAATCACTGATTTCTaGAGCTGGCTCCTCCCAGCTGATCTGAAGTTCCCCTGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SGAIAEFVPQEITDF*SWLLPADLKFPWLA
Trigger: AGCCAGCCAGGGGAACTTCAGATCAGCTGGGAGGAGCCAGCTCCAGAAATCAGTGATTTCCTGAGGTACGAACTCCGCTATGGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 90 bp GGGCCTGGGAGGAACACAGGGGCAAAGGAGTCCTCTCTGAGGACTTaGGGAGGATTTCAAGGAGGCTGGGTTCCACTTCTTCACAGGTAT +
Preference number: 5 (lower is better)
Translates to: GPGRNTGAKESSLRT*GGFQGGWVPLLHRY
Trigger: ATACCTGTGAAGAAGTGGAACCCAGCCTCCTTGAAATCCTCCCCAAGTCCTCAGAGAGGACTCCTTTGCCCCTGTGTTCCTCCCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS TCA 90 bp CTCAGGAAATCACTGATTTCTGGAGCTGGCTCCTCCCAGCTGATCTaGAGTTCCCCTGGCTGGCTCCCACCCATGGCCTTGATGATACTG +
Preference number: 5 (lower is better)
Translates to: LRKSLISGAGSSQLI*SSPGWLPPMALMIL
Trigger: CAGTATCATCAAGGCCATGGGTGGGAGCCAGCCAGGGGAACTTCAGATCAGCTGGGAGGAGCCAGCTCCAGAAATCAGTGATTTCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 90 bp ATGGCCTTCTCCTGTGTATCGGAGTTGATAACAGGTCTCTTGGGCTaGCCAGGACGATGGGTGCTGCCACTCCAATTCCAGATGCCCACT +
Preference number: 5 (lower is better)
Translates to: MAFSCVSELITGLLG*PGRWVLPLQFQMPT
Trigger: AGTGGGCATCTGGAATTGGAGTGGCAGCACCCATCGTCCTGGGCAGCCCAAGAGACCTGTTATCAACTCCGATACACAGGAGAAGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 90 bp TTCTTCACCCAGAGGTGCAGCGGAAAGAAGAGACGCACTTCCTCCTaGTCTGGAAACTGGCACACGTATCGGGTTCCAAAGTGGGGCATG +
Preference number: 5 (lower is better)
Translates to: FFTQRCSGKKRRTSS*SGNWHTYRVPKWGM
Trigger: CATGCCCCACTTTGGAACCCGATACGTGTGCCAGTTTCCAGACCAGGAGGAAGTGCGTCTCTTCTTTCCGCTGCACCTCTGGGTGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 90 bp TGTGTATCGGAGTTGATAACAGGTCTCTTGGGCTGCCCAGGACGATaGGTGCTGCCACTCCAATTCCAGATGCCCACTGGAGATCTCCCT +
Preference number: 5 (lower is better)
Translates to: CVSELITGLLGCPGR*VLPLQFQMPTGDLP
Trigger: AGGGAGATCTCCAGTGGGCATCTGGAATTGGAGTGGCAGCACCCATCGTCCTGGGCAGCCCAAGAGACCTGTTATCAACTCCGATACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 90 bp GCAAAGGAGTCCTCTCTGAGGACTTGGGGAGGATTTCAAGGAGGCTaGGTTCCACTTCTTCACAGGTATCTGAGACTGTGGCCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: AKESSLRTWGGFQGG*VPLLHRYLRLWPWA
Trigger: CGCCCAAGGCCACAGTCTCAGATACCTGTGAAGAAGTGGAACCCAGCCTCCTTGAAATCCTCCCCAAGTCCTCAGAGAGGACTCCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS CCA 90 bp GTCCTCAAGGCTGCTGCCAATAGCTTAGTGGTAGGTAGGAATGGTTaGCAATGTGGGTGGTACAGCAGGACCCTGACTCAGCCATGGGTG +
Preference number: 5 (lower is better)
Translates to: VLKAAANSLVVGRNG*QCGWYSRTLTQPWV
Trigger: CACCCATGGCTGAGTCAGGGTCCTGCTGTACCACCCACATTGCCAACCATTCCTACCTACCACTAAGCTATTGGCAGCAGCCTTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTCTGAGGCAGAATGGCTaGAACCCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSLRQNG*NPGGRG
Trigger: ACCTCTGCCTCCCGGGTTCAAGCCATTCTGCCTCAG...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp GAGCTTAGTGAAATGAGCCTGCCTGTGGAGAAAGGGTCCTGGTTTTATGTCAGCCATCTTGCCAGGGCATaGTGGGCTGAGCACATGGAG +
Preference number: 5 (lower is better)
Translates to: ELSEMSLPVEKGSWFYVSHLARA*WAEHME
Trigger: CTCCATGTGCTCAGCCCACAATGCCCTGGCAAGATG...GCTGACATAAAACCAGGACCCTTTCTCCACAGGCAGGCTCATTTCACTAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTGTCCTCTCTGAGGACTaGGGGAGGATTTCAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSVLSED*GRISRR
Trigger: CCTCCTTGAAATCCTCCCCAAGTCCTCAGAGAGGAC...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTCTGAAGCTTCTCTACTaGGGGAGGTCTGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSLKLLY*GRSALV
Trigger: GACCAAAGCAGACCTCCCCAAGTAGAGAAGCTTCAG...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTCCCTCCAGTGCAAGTTaGGGGTGGGGAGGCGCACAG +
Preference number: 5 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVPSSAS*GWGGAQ
Trigger: CTGTGCGCCTCCCCACCCCAAACTTGCACTGGAGGG...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGATCTTGGCTGCTGACTaGGGCCAGGTTTTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKILAAD*GQVLRG
Trigger: GCCCCTCAAAACCTGGCCCAAGTCAGCAGCCAAGAT...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGCAGCAAGGAGACATCTaGGCTGCTGACTTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKQQGDI*AADLGQ
Trigger: CTGGCCCAAGTCAGCAGCCAAGATGTCTCCTTGCTG...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp TTGTGTTGTGGGGGTAGGGTAGGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCGCTAGCATGGTCCTGTaGCTGCCATTGACAGGTAAC +
Preference number: 5 (lower is better)
Translates to: LCCGGRVGKFTEKSREFSASMVL*LPLTGN
Trigger: GTTACCTGTCAATGGCAGCAACAGGACCATGCTAGC...GCTAAACTCTCGAGACTTCTCTGTGAACTTCCCTACCCTACCCCCACAACACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTGCTGAGATCGCGCCATaGCACTGCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVAEIAP*HCSLGD
Trigger: GTCACCCAGGCTGCAGTGCAATGGCGCGATCTCAGC...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp CACTACTCTAGGTGCTGGGGGAAAAGGACAAATAAATCATGTTCCTTTCCCTCATTGGGGAGGTCTGCTTaGGTCCATCTTGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: HYSRCWGKRTNKSCSFPSLGRSA*VHLARA
Trigger: TGCCCTGGCAAGATGGACCAAAGCAGACCTCCCCAA...TGAGGGAAAGGAACATGATTTATTTGTCCTTTTCCCCCAGCACCTAGAGTAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp AAATGGGAAGTGTGGGGAAGTGGAGGCTTGTTTTCAAGGCGTTTGACATCAAAGTTGATAACAGGTCTCTaGGGCTGCCCAGGACGATGG +
Preference number: 5 (lower is better)
Translates to: KWEVWGSGGLFSRRLTSKLITGL*GCPGRW
Trigger: CCATCGTCCTGGGCAGCCCAAGAGACCTGTTATCAA...CTTTGATGTCAAACGCCTTGAAAACAAGCCTCCACTTCCCCACACTTCCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp GTAGTAGGGGAACTAATTGAAGTAGTCTCAAGAGTAAATGGGAAGTGTGGGGAACTGCTTTGGTCCATCTaGCCAGGGCATTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: VVGELIEVVSRVNGKCGELLWSI*PGHCGL
Trigger: CAGCCCACAATGCCCTGGCAAGATGGACCAAAGCAG...TTCCCCACACTTCCCATTTACTCTTGAGACTACTTCAATTAGTTCCCCTACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTTGTGAAGGACAGGAATaGAATCCAGCTCTGATTCTA +
Preference number: 5 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSCEGQE*NPALIL
Trigger: TAGAATCAGAGCTGGATTCAATTCCTGTCCTTCACA...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTCTGTCATTTCGTGACTaGAAGTGGCAGCGAGAGAAC +
Preference number: 5 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVLSFRD*KWQREN
Trigger: GTTCTCTCGCTGCCACTTCAAGTCACGAAATGACAG...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp GGGAAGTTCACAGAGAAGTCTCGAGAGTTTAGCTCTGTCCAGGGAACTGGGAGTAGATCCTATTGGATCTaGGAATTAGAAGATTTGAGG +
Preference number: 5 (lower is better)
Translates to: GKFTEKSREFSSVQGTGSRSYWI*ELEDLR
Trigger: CCTCAAATCTTCTAATTCCAAGATCCAATAGGATCT...ACTCCCAGTTCCCTGGACAGAGCTAAACTCTCGAGACTTCTCTGTGAACTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp ATCCTATTGGATCTTGGAATTAGAAGATTTGAGGTGCACTTTGCCTGGGCAGTTTTGGAATTAGAAGATTaGAGGTGCACTTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: ILLDLGIRRFEVHFAWAVLELED*RCTLPG
Trigger: CCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAA...AACTGCCCAGGCAAAGTGCACCTCAAATCTTCTAATTCCAAGATCCAATAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS-3UTR CAA 90 bp ACAAATCTTACAGCGAGATCAAAGGAACTGATGATTAACGAGATCCTATTGGATTCCTGTGTATCGGAGTaGATAACAGGTCTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: TNLTARSKELMINEILLDSCVSE*ITGLLG
Trigger: GCCCAAGAGACCTGTTATCAACTCCGATACACAGGA...ATCCAATAGGATCTCGTTAATCATCAGTTCCTTTGATCTCGCTGTAAGATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372470.9
CDS CCA 72 bp GAGCCGCGGCGAGTCCCAGAGGTGACGTGCAGGAAGTaGCGAAGCCGTAGGTGCGCACGGGCGGTGGACGGA +
Preference number: 6 (lower is better)
Translates to: EPRRVPEVTCRK*RSRRCARAVDG
Trigger: TCCGTCCACCGCCCGTGCGCACCTACGGCTTCGCCACTTCCTGCACGTCACCTCTGGGACTCGCCGCGGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS GCA 72 bp GAGTGTAAGGAGCCGCGGCGAGTCCCAGAGGTGACGTaGAGGAAGTGGCGAAGCCGTAGGTGCGCACGGGCG +
Preference number: 6 (lower is better)
Translates to: ECKEPRRVPEVT*RKWRSRRCARA
Trigger: CGCCCGTGCGCACCTACGGCTTCGCCACTTCCTGCACGTCACCTCTGGGACTCGCCGCGGCTCCTTACACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS CAA 72 bp CACCCTAGTTGGGTCCGACCACGAGCTCCAGGGACCTaGGTAGGTGGGGCCGTTGAGCCTGGCGCGCAGCTG +
Preference number: 6 (lower is better)
Translates to: HPSWVRPRAPGT*VGGAVEPGAQL
Trigger: CAGCTGCGCGCCAGGCTCAACGGCCCCACCTACCAAGGTCCCTGGAGCTCGTGGTCGGACCCAACTAGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 72 bp AGCAGGCCCAGGACGGCGCTGAGGCCCAGCACTAGATaGAGAGCGGTCACCAAGGAGATCCAGGCGGTCTCG +
Preference number: 6 (lower is better)
Translates to: SRPRTALRPSTR*RAVTKEIQAVS
Trigger: CGAGACCGCCTGGATCTCCTTGGTGACCGCTCTGCATCTAGTGCTGGGCCTCAGCGCCGTCCTGGGCCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 72 bp AGGCCTTCGGCTCCACCTGGTCCACCGCCAGTCTCCTaGCTGGCGGGGGCGGTACCTGTAGTGTGCAGGAAA +
Preference number: 6 (lower is better)
Translates to: RPSAPPGPPPVS*LAGAVPVVCRK
Trigger: TTTCCTGCACACTACAGGTACCGCCCCCGCCAGGCAGGAGACTGGCGGTGGACCAGGTGGAGCCGAAGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS GCA 72 bp CCAGAGGTGACGTGCAGGAAGTGGCGAAGCCGTAGGTaGGCACGGGCGGTGGACGGAGATCTGGGGTCACAG +
Preference number: 6 (lower is better)
Translates to: PEVTCRKWRSRR*ARAVDGDLGSQ
Trigger: CTGTGACCCCAGATCTCCGTCCACCGCCCGTGCGCACCTACGGCTTCGCCACTTCCTGCACGTCACCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS GCA 72 bp CCCAGGAGCCACCGAGGGAGATCCCATCAGGTTCGCTaGGCAGCTGCAGCCAGTAGGAGTTGCCAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: PRSHRGRSHQVR*AAAASRSCQAG
Trigger: TCCAGCCTGGCAACTCCTACTGGCTGCAGCTGCGCAGCGAACCTGATGGGATCTCCCTCGGTGGCTCCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 72 bp GATCCAGGCGGTCTCGGTGGCGGTCTCCACCCTAGTTaGGTCCGACCACGAGCTCCAGGGACCTTGGTAGGT +
Preference number: 6 (lower is better)
Translates to: DPGGLGGGLHPS*VRPRAPGTLVG
Trigger: ACCTACCAAGGTCCCTGGAGCTCGTGGTCGGACCCAACTAGGGTGGAGACCGCCACCGAGACCGCCTGGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 72 bp TTGGGCGGGCTCAGGGCTGCAGTGTCCCTAAGGTACTaGCCTAGGACCCGGTGCAGGTCTGGAAGTGAGGGC +
Preference number: 6 (lower is better)
Translates to: LGGLRAAVSLRY*PRTRCRSGSEG
Trigger: GCCCTCACTTCCAGACCTGCACCGGGTCCTAGGCCAGTACCTTAGGGACACTGCAGCCCTGAGCCCGCCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS CCA 72 bp ACCAAGAATGCCTGTTTACAGGCCTTCGGCTCCACCTaGTCCACCGCCAGTCTCCTGCCTGGCGGGGGCGGT +
Preference number: 6 (lower is better)
Translates to: TKNACLQAFGST*STASLLPGGGG
Trigger: ACCGCCCCCGCCAGGCAGGAGACTGGCGGTGGACCAGGTGGAGCCGAAGGCCTGTAAACAGGCATTCTTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS TCA 72 bp ACCACGAGCTCCAGGGACCTTGGTAGGTGGGGCCGTTaGGCCTGGCGCGCAGCTGTAAACGGTAGCGAGATC +
Preference number: 6 (lower is better)
Translates to: TTSSRDLGRWGR*AWRAAVNGSEI
Trigger: GATCTCGCTACCGTTTACAGCTGCGCGCCAGGCTCAACGGCCCCACCTACCAAGGTCCCTGGAGCTCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 72 bp GCTGCAGTGTCCCTAAGGTACTGGCCTAGGACCCGGTaGAGGTCTGGAAGTGAGGGCCACAGGGCATGCCTC +
Preference number: 6 (lower is better)
Translates to: AAVSLRYWPRTR*RSGSEGHRACL
Trigger: GAGGCATGCCCTGTGGCCCTCACTTCCAGACCTGCACCGGGTCCTAGGCCAGTACCTTAGGGACACTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS CCA 72 bp GCAGGAAGTGGCGAAGCCGTAGGTGCGCACGGGCGGTaGACGGAGATCTGGGGTCACAGAGCGAACCAAGAA +
Preference number: 6 (lower is better)
Translates to: AGSGEAVGAHGR*TEIWGHRANQE
Trigger: TTCTTGGTTCGCTCTGTGACCCCAGATCTCCGTCCACCGCCCGTGCGCACCTACGGCTTCGCCACTTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS GCA 72 bp CTCCCAGATGGGGTACCTGTCTCTGGGGCAGCACCGTaGCCTGCTGTGGTAGAAGAAGCCTTGGGAGCTAGC +
Preference number: 6 (lower is better)
Translates to: LPDGVPVSGAAP*PAVVEEALGAS
Trigger: GCTAGCTCCCAAGGCTTCTTCTACCACAGCAGGGCACGGTGCTGCCCCAGAGACAGGTACCCCATCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 72 bp TGGAGCTGGCTCCTCCCAGCTGATCTGAAGTTCCCCTaGCTGGCTCCCACCCATGGCCTTGATGATACTGGG +
Preference number: 6 (lower is better)
Translates to: WSWLLPADLKFP*LAPTHGLDDTG
Trigger: CCCAGTATCATCAAGGCCATGGGTGGGAGCCAGCCAGGGGAACTTCAGATCAGCTGGGAGGAGCCAGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 72 bp CAGATGCCCACTGGAGATCTCCCTCCAGTGCAAGTTTaGGGTGGGGAGGCGCACAGCCTGGTGGATCCAGAA +
Preference number: 6 (lower is better)
Translates to: QMPTGDLPPVQV*GGEAHSLVDPE
Trigger: TTCTGGATCCACCAGGCTGTGCGCCTCCCCACCCCAAACTTGCACTGGAGGGAGATCTCCAGTGGGCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS TCA 72 bp TCACTGATTTCTGGAGCTGGCTCCTCCCAGCTGATCTaGAGTTCCCCTGGCTGGCTCCCACCCATGGCCTTG +
Preference number: 6 (lower is better)
Translates to: SLISGAGSSQLI*SSPGWLPPMAL
Trigger: CAAGGCCATGGGTGGGAGCCAGCCAGGGGAACTTCAGATCAGCTGGGAGGAGCCAGCTCCAGAAATCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS TCA 72 bp GGCCTGGGAGGAACACAGGGGCAAAGGAGTCCTCTCTaGGGACTTGGGGAGGATTTCAAGGAGGCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: GLGGTQGQRSPL*GLGEDFKEAGF
Trigger: GAACCCAGCCTCCTTGAAATCCTCCCCAAGTCCTCAGAGAGGACTCCTTTGCCCCTGTGTTCCTCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS TCA 72 bp GGAATGGTTGGCAATGTGGGTGGTACAGCAGGACCCTaGCTCAGCCATGGGTGGGCACACAGACAGGGGCAT +
Preference number: 6 (lower is better)
Translates to: GMVGNVGGTAGP*LSHGWAHRQGH
Trigger: ATGCCCCTGTCTGTGTGCCCACCCATGGCTGAGTCAGGGTCCTGCTGTACCACCCACATTGCCAACCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372470.9
ENST00000413998.7
CDS GCA 72 bp GCCCAGGACGATGGGTGCTGCCACTCCAATTCCAGATaGCCACTGGAGATCTCCCTCCAGTGCAAGTTTGGG +
Preference number: 6 (lower is better)
Translates to: AQDDGCCHSNSR*PLEISLQCKFG
Trigger: CCCAAACTTGCACTGGAGGGAGATCTCCAGTGGGCATCTGGAATTGGAGTGGCAGCACCCATCGTCCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 72 bp GGGAGGTCTGCTTTGGTCCATCTTGCCAGGGCATTGTaGGCTGAGCACATGGAGACTGGTCCAGAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: GRSALVHLARAL*AEHMETGPEQR
Trigger: CCTCTGCTCTGGACCAGTCTCCATGTGCTCAGCCCACAATGCCCTGGCAAGATGGACCAAAGCAGACCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CAA 72 bp GGGGCAGCACCGTGCCCTGCTGTGGTAGAAGAAGCCTaGGGAGCTAGCATGGTCCTGTTGCTGCCATTGACA +
Preference number: 6 (lower is better)
Translates to: GAAPCPAVVEEA*GASMVLLLPLT
Trigger: TGTCAATGGCAGCAACAGGACCATGCTAGCTCCCAAGGCTTCTTCTACCACAGCAGGGCACGGTGCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CAA 90 bp CTCCAGCACCTTCCAGTCCTGATGGCCTTCTCCTGTGTATCGGAGTaGATAACAGGTCTCTTGGGCTGCCCAGGACGATGGGTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: LQHLPVLMAFSCVSE*ITGLLGCPGRWVLP
Trigger: TGGCAGCACCCATCGTCCTGGGCAGCCCAAGAGACCTGTTATCAACTCCGATACACAGGAGAAGGCCATCAGGACTGGAAGGTGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS TCA 72 bp GTCTGCTTTGGTCCATCTTGCCAGGGCATTGTGGGCTaGGCACATGGAGACTGGTCCAGAGCAGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: VCFGPSCQGIVG*AHGDWSRAEAE
Trigger: CTCAGCCTCTGCTCTGGACCAGTCTCCATGTGCTCAGCCCACAATGCCCTGGCAAGATGGACCAAAGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 72 bp GTAGGCATACAGCAGCTGGTATGTCCCACTGGGCGCTaGCTCTTCCTCATCCCAGAAGCAAGTGAGGTCCTC +
Preference number: 6 (lower is better)
Translates to: VGIQQLVCPTGR*LFLIPEASEVL
Trigger: GAGGACCTCACTTGCTTCTGGGATGAGGAAGAGGCAGCGCCCAGTGGGACATACCAGCTGCTGTATGCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 72 bp TGGACGGAGATCTGGGGTCACAGAGCGAACCAAGAATaGCTGTTTACAGGCCTTCGGCTCCACCTGGTCCAC +
Preference number: 6 (lower is better)
Translates to: WTEIWGHRANQE*LFTGLRLHLVH
Trigger: GTGGACCAGGTGGAGCCGAAGGCCTGTAAACAGGCATTCTTGGTTCGCTCTGTGACCCCAGATCTCCGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638732.1
CDS GCA 72 bp GAACAGGCTGAAGTGCTTGCTGGCAGGGGCCGATTTTaGAGAGCCTCGCTTGTCATCATAGGGAGCCTGGAC +
Preference number: 6 (lower is better)
Translates to: EQAEVLAGRGRF*RASLVIIGSLD
Trigger: GTCCAGGCTCCCTATGATGACAAGCGAGGCTCTGCAAAATCGGCCCCTGCCAGCAAGCACTTCAGCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643351.1
CDS CCA 72 bp ACGATGGGTGCTGCCACTCCAATTCCAGATGCCCACTaGAGATCTCCCTCCAGTGCAAGTTTGGGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: TMGAATPIPDAH*RSPSSASLGWG
Trigger: TCCCCACCCCAAACTTGCACTGGAGGGAGATCTCCAGTGGGCATCTGGAATTGGAGTGGCAGCACCCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CAA 72 bp TTGGGGAGGTCTGCTTTGGTCCATCTTGCCAGGGCATaGTGGGCTGAGCACATGGAGACTGGTCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: LGRSALVHLARA*WAEHMETGPEQ
Trigger: CTGCTCTGGACCAGTCTCCATGTGCTCAGCCCACAATGCCCTGGCAAGATGGACCAAAGCAGACCTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CAA 90 bp CTTCTCTACTTGGGGAGGTCTGCTTTGGTCCATCTTGCCAGGGCATaGTGGGCTGAGCACATGGAGACTGGTCCAGAGCAGAGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: LLYLGRSALVHLARA*WAEHMETGPEQRLS
Trigger: ACTCAGCCTCTGCTCTGGACCAGTCTCCATGTGCTCAGCCCACAATGCCCTGGCAAGATGGACCAAAGCAGACCTCCCCAAGTAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CAA 90 bp CCTGTCTCTGGGGCAGCACCGTGCCCTGCTGTGGTAGAAGAAGCCTaGGGAGCTAGCATGGTCCTGTTGCTGCCATTGACAGGTAACATT +
Preference number: 6 (lower is better)
Translates to: PVSGAAPCPAVVEEA*GASMVLLLPLTGNI
Trigger: AATGTTACCTGTCAATGGCAGCAACAGGACCATGCTAGCTCCCAAGGCTTCTTCTACCACAGCAGGGCACGGTGCTGCCCCAGAGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CAA 90 bp TGGGCCTGGGAGGAACACAGGGGCAAAGGAGTCCTCTCTGAGGACTaGGGGAGGATTTCAAGGAGGCTGGGTTCCACTTCTTCACAGGTA +
Preference number: 6 (lower is better)
Translates to: WAWEEHRGKGVLSED*GRISRRLGSTSSQV
Trigger: TACCTGTGAAGAAGTGGAACCCAGCCTCCTTGAAATCCTCCCCAAGTCCTCAGAGAGGACTCCTTTGCCCCTGTGTTCCTCCCAGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS CAA 72 bp GCCTTCTCCTGTGTATCGGAGTTGATAACAGGTCTCTaGGGCTGCCCAGGACGATGGGTGCTGCCACTCCAA +
Preference number: 6 (lower is better)
Translates to: AFSCVSELITGL*GCPGRWVLPLQ
Trigger: TTGGAGTGGCAGCACCCATCGTCCTGGGCAGCCCAAGAGACCTGTTATCAACTCCGATACACAGGAGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CAA 90 bp GTCCTGATGGCCTTCTCCTGTGTATCGGAGTTGATAACAGGTCTCTaGGGCTGCCCAGGACGATGGGTGCTGCCACTCCAATTCCAGATG +
Preference number: 6 (lower is better)
Translates to: VLMAFSCVSELITGL*GCPGRWVLPLQFQM
Trigger: CATCTGGAATTGGAGTGGCAGCACCCATCGTCCTGGGCAGCCCAAGAGACCTGTTATCAACTCCGATACACAGGAGAAGGCCATCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 72 bp TCCTGTGTATCGGAGTTGATAACAGGTCTCTTGGGCTaGCCAGGACGATGGGTGCTGCCACTCCAATTCCAG +
Preference number: 6 (lower is better)
Translates to: SCVSELITGLLG*PGRWVLPLQFQ
Trigger: CTGGAATTGGAGTGGCAGCACCCATCGTCCTGGGCAGCCCAAGAGACCTGTTATCAACTCCGATACACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS GCA 72 bp ACCCGGTGCAGGTCTGGAAGTGAGGGCCACAGGGCATaGCTCAGTCTCTTGTGGAGAAAACCAGTTTGGAAA +
Preference number: 6 (lower is better)
Translates to: TRCRSGSEGHRA*LSLLWRKPVWK
Trigger: TTTCCAAACTGGTTTTCTCCACAAGAGACTGAGGCATGCCCTGTGGCCCTCACTTCCAGACCTGCACCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643351.1
CDS CCA 72 bp GGAAAGAAGAGACGCACTTCCTCCTGGTCTGGAAACTaGCACACGTATCGGGTTCCAAAGTGGGGCATGCTC +
Preference number: 6 (lower is better)
Translates to: GKKRRTSSWSGN*HTYRVPKWGML
Trigger: GAGCATGCCCCACTTTGGAACCCGATACGTGTGCCAGTTTCCAGACCAGGAGGAAGTGCGTCTCTTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 72 bp CAGAGGTGCAGCGGAAAGAAGAGACGCACTTCCTCCTaGTCTGGAAACTGGCACACGTATCGGGTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: QRCSGKKRRTSS*SGNWHTYRVPK
Trigger: CTTTGGAACCCGATACGTGTGCCAGTTTCCAGACCAGGAGGAAGTGCGTCTCTTCTTTCCGCTGCACCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CAA 72 bp AGCTTCTCTACTTGGGGAGGTCTGCTTTGGTCCATCTaGCCAGGGCATTGTGGGCTGAGCACATGGAGACTG +
Preference number: 6 (lower is better)
Translates to: SFSTWGGLLWSI*PGHCGLSTWRL
Trigger: CAGTCTCCATGTGCTCAGCCCACAATGCCCTGGCAAGATGGACCAAAGCAGACCTCCCCAAGTAGAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CAA 72 bp GAGGAACACAGGGGCAAAGGAGTCCTCTCTGAGGACTaGGGGAGGATTTCAAGGAGGCTGGGTTCCACTTCT +
Preference number: 6 (lower is better)
Translates to: EEHRGKGVLSED*GRISRRLGSTS
Trigger: AGAAGTGGAACCCAGCCTCCTTGAAATCCTCCCCAAGTCCTCAGAGAGGACTCCTTTGCCCCTGTGTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS CCA 72 bp GAGTTCGTACCTCAGGAAATCACTGATTTCTGGAGCTaGCTCCTCCCAGCTGATCTGAAGTTCCCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: EFVPQEITDFWS*LLPADLKFPWL
Trigger: CAGCCAGGGGAACTTCAGATCAGCTGGGAGGAGCCAGCTCCAGAAATCAGTGATTTCCTGAGGTACGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 72 bp AGGAACACAGGGGCAAAGGAGTCCTCTCTGAGGACTTaGGGAGGATTTCAAGGAGGCTGGGTTCCACTTCTT +
Preference number: 6 (lower is better)
Translates to: RNTGAKESSLRT*GGFQGGWVPLL
Trigger: AAGAAGTGGAACCCAGCCTCCTTGAAATCCTCCCCAAGTCCTCAGAGAGGACTCCTTTGCCCCTGTGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS CCA 72 bp GCTGCTGCCAATAGCTTAGTGGTAGGTAGGAATGGTTaGCAATGTGGGTGGTACAGCAGGACCCTGACTCAG +
Preference number: 6 (lower is better)
Translates to: AAANSLVVGRNG*QCGWYSRTLTQ
Trigger: CTGAGTCAGGGTCCTGCTGTACCACCCACATTGCCAACCATTCCTACCTACCACTAAGCTATTGGCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372470.9
ENST00000413998.7
CDS CCA 72 bp ATAGCGGAGTTCGTACCTCAGGAAATCACTGATTTCTaGAGCTGGCTCCTCCCAGCTGATCTGAAGTTCCCC +
Preference number: 6 (lower is better)
Translates to: IAEFVPQEITDF*SWLLPADLKFP
Trigger: GGGGAACTTCAGATCAGCTGGGAGGAGCCAGCTCCAGAAATCAGTGATTTCCTGAGGTACGAACTCCGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000638732.1
CDS CCA 72 bp TCCTCTCTGAGGACTTGGGGAGGATTTCAAGGAGGCTaGGTTCCACTTCTTCACAGGTATCTGAGACTGTGG +
Preference number: 6 (lower is better)
Translates to: SSLRTWGGFQGG*VPLLHRYLRLW
Trigger: CCACAGTCTCAGATACCTGTGAAGAAGTGGAACCCAGCCTCCTTGAAATCCTCCCCAAGTCCTCAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372470.9
ENST00000413998.7
ENST00000643351.1
CDS CAA 72 bp CAGGGCATGCCTCAGTCTCTTGTGGAGAAAACCAGTTaGGAAAGGCTGATGCACAGGGTAGAACAGGCTGAA +
Preference number: 6 (lower is better)
Translates to: QGMPQSLVEKTS*ERLMHRVEQAE
Trigger: TTCAGCCTGTTCTACCCTGTGCATCAGCCTTTCCAAACTGGTTTTCTCCACAAGAGACTGAGGCATGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643351.1