RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPHOSPH9 (Homo sapiens)

Ensembl gene IDs: ENSG00000051825

Ensembl transcript IDs: ENST00000302373.8, ENST00000369865.3, ENST00000535049.5, ENST00000537854.5, ENST00000538169.5, ENST00000539024.5, ENST00000539336.2, ENST00000539639.5, ENST00000541076.6, ENST00000541437.5, ENST00000541603.6, ENST00000541823.1, ENST00000545406.1, ENST00000545556.6, ENST00000563178.1, ENST00000606320.6, ENST00000606321.1, ENST00000606326.1, ENST00000606704.1

Found 695 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTaGCTAGATTCAGAAACAACTGCAGCAAGCACTTGTCTACCCACC +
Preference number: 1 (lower is better)
Translates to: WSLLPRSLQLHDSSI*LDSETTAASTCLPT
Trigger: GGTGGGTAGACAAGTGCTTGCTGCAGTTGTTTCTGAATCTAGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
3UTR TCA 90 bp CCCTGGCCTGGGGACCAGCCAGGTGAAGGGTGCTCAAAGGTCATTTaGGAGCCTGCTTGGAATAACTGGGATGGCTTGGTTCATTCTAAC +
Preference number: 1 (lower is better)
Translates to: PWPGDQPGEGCSKVI*EPAWNNWDGLVHSN
Trigger: GTTAGAATGAACCAAGCCATCCCAGTTATTCCAAGCAGGCTCTCAAATGACCTTTGAGCACCCTTCACCTGGCTGGTCCCCAGGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR CCA 90 bp CCTAGGCTACAGGTTTCCTCCAGCTGGTTATCCACGTTACTGTCCTaGGTGTCCAGAGGCTGGCCAGTAAAGATGGAATACTCTGCACCT +
Preference number: 1 (lower is better)
Translates to: PRLQVSSSWLSTLLS*VSRGWPVKMEYSAP
Trigger: AGGTGCAGAGTATTCCATCTTTACTGGCCAGCCTCTGGACACCCAGGACAGTAACGTGGATAACCAGCTGGAGGAAACCTGTAGCCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR GCA 90 bp AACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACCAGGCTaGCCTCTTAATCCCTCACGGGGTGGTGGCTTGTATTTCAAAGGG +
Preference number: 1 (lower is better)
Translates to: NYDGQLKPCTLRKPG*PLNPSRGGGLYFKG
Trigger: CCCTTTGAAATACAAGCCACCACCCCGTGAGGGATTAAGAGGGCAGCCTGGTTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR CCA 90 bp TGTCCATTTATTGTCCAGGGTGGGACACAAGTTAATTCAGAACAATaGGCAGAGAGCTACTCTGAGAGCCCTCCAGAGAGGGCTCTCCAA +
Preference number: 1 (lower is better)
Translates to: CPFIVQGGTQVNSEQ*AESYSESPPERALQ
Trigger: TTGGAGAGCCCTCTCTGGAGGGCTCTCAGAGTAGCTCTCTGCCCATTGTTCTGAATTAACTTGTGTCCCACCCTGGACAATAAATGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR TCA 90 bp TTCACGTTCACTCGGCAGAATGTGGACAACTTTACCTCTGGTGGATaGTTTGGGTTGGAAGCAGAAGTGAGATTCCTCTCAGGTAACTGC +
Preference number: 1 (lower is better)
Translates to: FTFTRQNVDNFTSGG*FGLEAEVRFLSGNC
Trigger: GCAGTTACCTGAGAGGAATCTCACTTCTGCTTCCAACCCAAATCATCCACCAGAGGTAAAGTTGTCCACATTCTGCCGAGTGAACGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR CCA 90 bp AGCATTGTTCACGTTCACTCGGCAGAATGTGGACAACTTTACCTCTaGTGGATGATTTGGGTTGGAAGCAGAAGTGAGATTCCTCTCAGG +
Preference number: 1 (lower is better)
Translates to: SIVHVHSAECGQLYL*WMIWVGSRSEIPLR
Trigger: CCTGAGAGGAATCTCACTTCTGCTTCCAACCCAAATCATCCACCAGAGGTAAAGTTGTCCACATTCTGCCGAGTGAACGTGAACAATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR TCA 90 bp CCAAACGATCTTCCAAGGCTTCCTGATTTAATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAA +
Preference number: 1 (lower is better)
Translates to: PNDLPRLPDLILSVK*FVLQEKASCLVLPQ
Trigger: TTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAATCAGGAAGCCTTGGAAGATCGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR GCA 90 bp GCCGGCACCGCAGGTGCTACATACTGTCCTTTGGGAACATCTATGTaGTCCATGAACTCCTTAGGGTCTTTAGATTTGTACAGATTTAAT +
Preference number: 1 (lower is better)
Translates to: AGTAGATYCPLGTSM*SMNSLGSLDLYRFN
Trigger: ATTAAATCTGTACAAATCTAAAGACCCTAAGGAGTTCATGGAGCACATAGATGTTCCCAAAGGACAGTATGTAGCACCTGCGGTGCCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR CCA 90 bp ATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGT +
Preference number: 1 (lower is better)
Translates to: ILLPGCSHRYFLHSI*HRFRARAMINMVIG
Trigger: ACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
3UTR CCA 90 bp AAAGTTAGAGTCAGGAAGCATTGTTCACGTTCACTCGGCAGAATGTaGACAACTTTACCTCTGGTGGATGATTTGGGTTGGAAGCAGAAG +
Preference number: 1 (lower is better)
Translates to: KVRVRKHCSRSLGRM*TTLPLVDDLGWKQK
Trigger: CTTCTGCTTCCAACCCAAATCATCCACCAGAGGTAAAGTTGTCCACATTCTGCCGAGTGAACGTGAACAATGCTTCCTGACTCTAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR TCA 90 bp CCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCCACCAAATTaGATAGCTGTAACCACCTGGTCTCACAGTTTTTCCAAAGTTCCG +
Preference number: 1 (lower is better)
Translates to: PAGQLSVLGIVFPPN*IAVTTWSHSFSKVP
Trigger: CGGAACTTTGGAAAAACTGTGAGACCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535049.5
3UTR TCA 90 bp CCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCCACCAAATTaGATAGCTGTAACCACCTGGTACTTAGCAGTTGCTGCTATCGAA +
Preference number: 1 (lower is better)
Translates to: PAGQLSVLGIVFPPN*IAVTTWYLAVAAIE
Trigger: TTCGATAGCAGCAACTGCTAAGTACCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR GCA 90 bp TACAAAAGGTGCCATATCCACTGCTTACTGAGCAACTATCCACATTaGAGTCTGGTTGTGACGTGGACATTTCTTGCTGTATTTCAGGTT +
Preference number: 1 (lower is better)
Translates to: YKRCHIHCLLSNYPH*SLVVTWTFLAVFQV
Trigger: AACCTGAAATACAGCAAGAAATGTCCACGTCACAACCAGACTGCAATGTGGATAGTTGCTCAGTAAGCAGTGGATATGGCACCTTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR CCA 90 bp GATGATGATCTCTGTGAGGCCGAATTAAGTCTCTTTTGTCTCTGTTaGGCACACTTTTCTGGAGAACGACTTGCATTAACTGAAGTTTCA +
Preference number: 1 (lower is better)
Translates to: DDDLCEAELSLFCLC*AHFSGERLALTEVS
Trigger: TGAAACTTCAGTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAGACTTAATTCGGCCTCACAGAGATCATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR GCA 90 bp ATTTGTACAGATTTAATTCTGAGATACAAAAGGTGCCATATCCACTaGTTACTGAGCAACTATCCACATTGCAGTCTGGTTGTGACGTGG +
Preference number: 1 (lower is better)
Translates to: ICTDLILRYKRCHIH*LLSNYPHCSLVVTW
Trigger: CCACGTCACAACCAGACTGCAATGTGGATAGTTGCTCAGTAAGCAGTGGATATGGCACCTTTTGTATCTCAGAATTAAATCTGTACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR CCA 90 bp TTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATaGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTA +
Preference number: 1 (lower is better)
Translates to: FNGYKSQRFAEVRKT*NFFSVMRTEPSSRL
Trigger: TAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR TCA 90 bp AATCTGTTGAAAAGCATATTGCCATTTGCTCTCAAGTTAGTTTCTTaGAAATACAAGGGCATGAACACCTTCTTCTCTAAGTCTAAAGGT +
Preference number: 1 (lower is better)
Translates to: NLLKSILPFALKLVS*KYKGMNTFFSKSKG
Trigger: ACCTTTAGACTTAGAGAAGAAGGTGTTCATGCCCTTGTATTTTCAAGAAACTAACTTGAGAGCAAATGGCAATATGCTTTTCAACAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539024.5
3UTR CAA 90 bp GTAGGGAGCAAAGGTTCAACTGCACTGTCAGACAGGCCACCCTCCTaGCTGAGAAGGGAGCAGGGCTGTGGACCCCTGGCCTGGGGACCA +
Preference number: 2 (lower is better)
Translates to: VGSKGSTALSDRPPS*LRREQGCGPLAWGP
Trigger: TGGTCCCCAGGCCAGGGGTCCACAGCCCTGCTCCCTTCTCAGCAAGGAGGGTGGCCTGTCTGACAGTGCAGTTGAACCTTTGCTCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR-3UTR TCA 90 bp CAGGCGCCCACCCCCACACCATGCCCGGCTAATTTTTGTACTTTAGTAGAGACGCTGGTCTCGAACTCCTaGCCTCAGGTGACCCGCCTG +
Preference number: 2 (lower is better)
Translates to: QAPTPTPCPANFCTLVETLVSNS*PQVTRL
Trigger: CAGGCGGGTCACCTGAGGTCAGGAGTTCGAGACCAG...CGTCTCTACTAAAGTACAAAAATTAGCCGGGCATGGTGTGGGGGTGGGCGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539024.5
3UTR-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCCCACGTGCTACTTCTaGGAGCCAGCGGCTACCACA +
Preference number: 2 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRPTCYF*EPAATT
Trigger: TGTGGTAGCCGCTGGCTCTCAGAAGTAGCACGTGGG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR-3UTR GCA 90 bp GAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTGGCTAGATTCAGAAACAACTaGAGCAAGCACTTGTCTACC +
Preference number: 2 (lower is better)
Translates to: EMVPAPAELTASRLQHLARFRNN*SKHLST
Trigger: GGTAGACAAGTGCTTGCTGCAGTTGTTTCTGAATCT...AGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
3UTR-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTCCCTCACGGGGTGGTaGCTTGTATTTCAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSLTGW*LVFQRV
Trigger: AACCCTTTGAAATACAAGCCACCACCCCGTGAGGGA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR-3UTR TCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTCAGGGCAAGAGCTATaGTTAACATGGTTATCGGTG +
Preference number: 2 (lower is better)
Translates to: RPPGEGILLSAASIWSFSSGQEL*LTWLSV
Trigger: CACCGATAACCATGTTAATCATAGCTCTTGCCCTGA...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGGAGTGGAAAGGGGTaGACATATCCAGATGACAAC +
Preference number: 2 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRRSGKG*TYPDDN
Trigger: GTTGTCATCTGGATATGTTCACCCCTTTCCACTCCT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR CAA 90 bp CTAAGAAAACCAGGCTGCCCTCTTAATCCCTCACGGGGTGGTGGCTaGTATTTCAAAGGGTTTATCTGTCCATTTATTGTCCAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: LRKPGCPLNPSRGGG*YFKGFICPFIVQGG
Trigger: CCCACCCTGGACAATAAATGGACAGATAAACCCTTTGAAATACAAGCCACCACCCCGTGAGGGATTAAGAGGGCAGCCTGGTTTTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR CAA 90 bp TCTACAAGTGACTCAGCCGGCACCGCAGGTGCTACATACTGTCCTTaGGGAACATCTATGTGCTCCATGAACTCCTTAGGGTCTTTAGAT +
Preference number: 2 (lower is better)
Translates to: STSDSAGTAGATYCP*GTSMCSMNSLGSLD
Trigger: ATCTAAAGACCCTAAGGAGTTCATGGAGCACATAGATGTTCCCAAAGGACAGTATGTAGCACCTGCGGTGCCGGCTGAGTCACTTGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR TCA 90 bp GGGTCCTCTGCTCAGAGTACTCTACTAGGTGCTGAGGATACAAGAGAAACCAGACAGAGATCACGCTTTTaGACCCAAGAGATGTACACA +
Preference number: 2 (lower is better)
Translates to: GSSAQSTLLGAEDTRETRQRSRF*TQEMYT
Trigger: TGTGTACATCTCTTGGGTTCAAAAGCGTGATCTCTG...TCTGGTTTCTCTTGTATCCTCAGCACCTAGTAGAGTACTCTGAGCAGAGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606321.1
3UTR-3UTR GCA 90 bp GCACCTGGAATCAGCCATTTCCGCCTGCTGACGTCTGAAGTTGCTAGTGTGTTGCGACTAGTAGCTTCATaGAAAGCACTATCTAATTGG +
Preference number: 2 (lower is better)
Translates to: APGISHFRLLTSEVASVLRLVAS*KALSNW
Trigger: CCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCG...CAACACACTAGCAACTTCAGACGTCAGCAGGCGGAAATGGCTGATTCCAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR TCA 90 bp GCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCAGGGCAAGAGCTATaGTTAACATGGTTATCGGTG +
Preference number: 2 (lower is better)
Translates to: AEVRKTWNFFSVMRTEPSSGQEL*LTWLSV
Trigger: CACCGATAACCATGTTAATCATAGCTCTTGCCCTGA...ACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR TCA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTCCCCTGTGGAGTGACTaGAACCGGCTTACACTGTTC +
Preference number: 2 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILPLWSD*NRLTLF
Trigger: GAACAGTGTAAGCCGGTTTCAGTCACTCCACAGGGG...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR CCA 90 bp AGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCTTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: RCAKHGISLASCELNPVLFLHSI*HRFRAR
Trigger: TCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA...GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR CAA 90 bp CACGGGGTGGTGGCTTGTATTTCAAAGGGTTTATCTGTCCATTTATaGTCCAGGGTGGGACACAAGTTAATTCAGAACAATGGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: HGVVACISKGLSVHL*SRVGHKLIQNNGQR
Trigger: TCTCTGCCCATTGTTCTGAATTAACTTGTGTCCCACCCTGGACAATAAATGGACAGATAAACCCTTTGAAATACAAGCCACCACCCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR-3UTR TCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTTCAGGGCAAGAGCTATaGTTAACATGGTTATCGGTG +
Preference number: 2 (lower is better)
Translates to: NLVCKVIRPPGEGILLSASGQEL*LTWLSV
Trigger: CACCGATAACCATGTTAATCATAGCTCTTGCCCTGA...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR TCA 90 bp AGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCTCAGGGCAAGAGCTATaGTTAACATGGTTATCGGTG +
Preference number: 2 (lower is better)
Translates to: SVMRTEPSSRLILSKRSSSGQEL*LTWLSV
Trigger: CACCGATAACCATGTTAATCATAGCTCTTGCCCTGA...GGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR TCA 90 bp ATATCCTTCAGTGACGGTAGCTTCATCTCATTACTAGTATTAGACTGGTTTGGTCCCCTGTGGAGTGACTaGAACCGGCTTACACTGTTC +
Preference number: 2 (lower is better)
Translates to: ISFSDGSFISLLVLDWFGPLWSD*NRLTLF
Trigger: GAACAGTGTAAGCCGGTTTCAGTCACTCCACAGGGG...ACCAAACCAGTCTAATACTAGTAATGAGATGAAGCTACCGTCACTGAAGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR TCA 90 bp AATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTCCCCTGTGGAGTGACTaGAACCGGCTTACACTGTTC +
Preference number: 2 (lower is better)
Translates to: NGYKSQRFAEVRKTWNFFPLWSD*NRLTLF
Trigger: GAACAGTGTAAGCCGGTTTCAGTCACTCCACAGGGG...AAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR CCA 90 bp CTGACTGGCATCAAGCCTCTAAAGCAGATTCAAGCTAAGACATTTCACCTGATTTTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: LTGIKPLKQIQAKTFHLIFLHSI*HRFRAR
Trigger: TCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA...AATCAGGTGAAATGTCTTAGCTTGAATCTGCTTTAGAGGCTTGATGCCAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539024.5
3UTR-3UTR TCA 90 bp CTGACTGGCATCAAGCCTCTAAAGCAGATTCAAGCTAAGACATTTCACCTGATTCTGTTCGTAGCTAACTaGTTTATTCTTCTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: LTGIKPLKQIQAKTFHLILFVAN*FILLPG
Trigger: GCCTGGGAGAAGAATAAATCAGTTAGCTACGAACAG...AATCAGGTGAAATGTCTTAGCTTGAATCTGCTTTAGAGGCTTGATGCCAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539024.5
3UTR-3UTR TCA 90 bp TTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGAATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: FFSVMRTEPSSRLILSKRILSVK*FVLQEK
Trigger: CTTCTCCTGGAGGACGAATCACTTTACAGACAAGAT...TCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR CCA 90 bp AGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCAGTGCTGCCTCAATCTaGTCCTTTTCTTTTGTAAGT +
Preference number: 2 (lower is better)
Translates to: SVMRTEPSSRLILSKRSSSAASI*SFSFVS
Trigger: ACTTACAAAAGAAAAGGACCAGATTGAGGCAGCACT...GGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR GCA 90 bp AGACATCCAAGCATTTGGAGTTTCATCTGGTTTACTGAGGTAAAAAGCACGAGGATTTCTTTAGCGTCATaGGAACTGAACCCAGTTCTC +
Preference number: 2 (lower is better)
Translates to: RHPSIWSFIWFTEVKSTRISLAS*ELNPVL
Trigger: GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAAT...CCTCGTGCTTTTTACCTCAGTAAACCAGATGAAACTCCAAATGCTTGGATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR GCA 90 bp GGGTTGGAAGCAGAAGTGAGATTCCTCTCAGGTAACTGCTTGTTTTCCCTTTGTGTACTTAGCAGTTGCTaGTATCGAATTCTTAAACCA +
Preference number: 2 (lower is better)
Translates to: GLEAEVRFLSGNCLFSLCVLSSC*YRILKP
Trigger: TGGTTTAAGAATTCGATAGCAGCAACTGCTAAGTAC...ACAAAGGGAAAACAAGCAGTTACCTGAGAGGAATCTCACTTCTGCTTCCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CCA 90 bp ATATCCTTCAGTGACGGTAGCTTCATCTCATTACTAGTATTAGACTGGTTTGGTTTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: ISFSDGSFISLLVLDWFGFLHSI*HRFRAR
Trigger: TCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA...ACCAAACCAGTCTAATACTAGTAATGAGATGAAGCTACCGTCACTGAAGGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR CAA 90 bp TCTTTACTGCTTGTTCTCATTTCTTCAATTCGTTCCTGCAAAATTTaGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTC +
Preference number: 2 (lower is better)
Translates to: SLLLVLISSIRSCKI*EALLAALKRSLKSF
Trigger: GAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATTGAAGAAATGAGAACAAGCAGTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
3UTR CAA 90 bp TCTTCCGAGTCATCTAGAGGAAGAAACTGGAGTTGCTTTCTTGGATaGGTACGTTGTAATGTAGACACAGGAACAGTATCTAAATCATCC +
Preference number: 2 (lower is better)
Translates to: SSESSRGRNWSCFLG*VRCNVDTGTVSKSS
Trigger: GGATGATTTAGATACTGTTCCTGTGTCTACATTACAACGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCCTCTAGATGACTCGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR TCA 90 bp AATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTATTGCAGTCTGGTTGTaGCGTGGACATTTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: NGYKSQRFAEVRKTWNFFIAVWL*RGHFLL
Trigger: CAGCAAGAAATGTCCACGTCACAACCAGACTGCAAT...AAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR TCA 90 bp ATTCATAATAAGCTCGAAGATCTGCTATGTGTCGAGCATGCTTTTCCTTCAGATTTTACCTCTGGTGGATaGTTTGGGTTGGAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: IHNKLEDLLCVEHAFPSDFTSGG*FGLEAE
Trigger: TTCTGCTTCCAACCCAAATCATCCACCAGAGGTAAA...ATCTGAAGGAAAAGCATGCTCGACACATAGCAGATCTTCGAGCTTATTATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR TCA 90 bp CTCTTTTGTCTCTGTTGGGCACACTTTTCTGGAGAACGACTTGCATTAACTGAATTGCTTGTTTTGAAGTaGGTAGGCTTTAGATCTCCT +
Preference number: 2 (lower is better)
Translates to: LFCLCWAHFSGERLALTELLVLK*VGFRSP
Trigger: AGGAGATCTAAAGCCTACTCACTTCAAAACAAGCAA...TTCAGTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR TCA 90 bp CTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAATCTACTTGCTTGACCTaGGCTTCAAGTTTTGAAATC +
Preference number: 2 (lower is better)
Translates to: LKDLQRCAKHGISLASCESTCLT*ASSFEI
Trigger: GATTTCAAAACTTGAAGCTCAGGTCAAGCAAGTAGA...TTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CCA 90 bp TCAAAATTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGTTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: SKFNGYKSQRFAEVRKTWFLHSI*HRFRAR
Trigger: TCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA...CCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR CCA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTGAGGTGCGCAAAACATaGAATTTCTTTAGCGTCATG +
Preference number: 2 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILEVRKT*NFFSVM
Trigger: CATGACGCTAAAGAAATTCCATGTTTTGCGCACCTC...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR TCA 90 bp ATATCCTTCAGTGACGGTAGCTTCATCTCATTACTAGTATTAGACTGGTTTGGTTCCTCCTGTATATGTTaGATTTGGTTGTGGAACTGC +
Preference number: 2 (lower is better)
Translates to: ISFSDGSFISLLVLDWFGSSCIC*IWLWNC
Trigger: GCAGTTCCACAACCAAATTCAACATATACAGGAGGA...ACCAAACCAGTCTAATACTAGTAATGAGATGAAGCTACCGTCACTGAAGGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR GCA 90 bp ATATCCTTCAGTGACGGTAGCTTCATCTCATTACTAGTATTAGACTGGTTTGGTGACGTGGACATTTCTTaGTGTATTTCAGGTTCTGTG +
Preference number: 2 (lower is better)
Translates to: ISFSDGSFISLLVLDWFGDVDIS*CISGSV
Trigger: CACAGAACCTGAAATACAGCAAGAAATGTCCACGTC...ACCAAACCAGTCTAATACTAGTAATGAGATGAAGCTACCGTCACTGAAGGATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CCA 90 bp AGACATCCAAGCATTTGGAGTTTCATCTGGTTTACTGAGGTAAAAAGCACGAGGATTCACCAGGAGAAATaGATACATCTTCCTTTAAAG +
Preference number: 2 (lower is better)
Translates to: RHPSIWSFIWFTEVKSTRIHQEK*IHLPLK
Trigger: CTTTAAAGGAAGATGTATCCATTTCTCCTGGTGAAT...CCTCGTGCTTTTTACCTCAGTAAACCAGATGAAACTCCAAATGCTTGGATGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR GCA 90 bp ATATCCTTCAGTGACGGTAGCTTCATCTCATTACTAGTATTAGACTGGTTTGGTCTGGTACTTAGCAGTTaGTGCTATCGAATTCTTAAA +
Preference number: 2 (lower is better)
Translates to: ISFSDGSFISLLVLDWFGLVLSS*CYRILK
Trigger: TTTAAGAATTCGATAGCAGCAACTGCTAAGTACCAG...ACCAAACCAGTCTAATACTAGTAATGAGATGAAGCTACCGTCACTGAAGGATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CCA 90 bp TTCTTATTTTCAAGTGTTCTCACGCGACTAGTAGCTTCATGCAAAGCACTATCTGCAACTATCTGTTCTTaGCATTGTTTTTCCACCAAA +
Preference number: 2 (lower is better)
Translates to: FLFSSVLTRLVASCKALSATICS*HCFSTK
Trigger: TTTGGTGGAAAAACAATGCCAAGAACAGATAGTTGC...AGATAGTGCTTTGCATGAAGCTACTAGTCGCGTGAGAACACTTGAAAATAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR CCA 72 bp GGTGAACGGTGCCCTAGGCTACAGGTTTCCTCCAGCTaGTTATCCACGTTACTGTCCTGGGTGTCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: GERCPRLQVSSS*LSTLLSWVSRG
Trigger: GCCTCTGGACACCCAGGACAGTAACGTGGATAACCAGCTGGAGGAAACCTGTAGCCTAGGGCACCGTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR GCA 72 bp TTGAGTGCCTGTAGTGCAAGAAAGAGAGATGGTCCCTaGTCCCGCGGAGCTTACAGCTTCACGACTCCAGCA +
Preference number: 3 (lower is better)
Translates to: LSACSARKRDGP*SRGAYSFTTPA
Trigger: TGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTCTTGCACTACAGGCACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
3UTR GCA 72 bp GGTGTCCAGAGGCTGGCCAGTAAAGATGGAATACTCTaGACCTGGAATCAGCCATTTCCGCCTGCTGACGTC +
Preference number: 3 (lower is better)
Translates to: GVQRLASKDGIL*TWNQPFPPADV
Trigger: GACGTCAGCAGGCGGAAATGGCTGATTCCAGGTGCAGAGTATTCCATCTTTACTGGCCAGCCTCTGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR TCA 72 bp AATACTCTGCACCTGGAATCAGCCATTTCCGCCTGCTaGCGTCTGAAGTTGCTAGTGTGTTGGCACGCGAGG +
Preference number: 3 (lower is better)
Translates to: NTLHLESAISAC*RLKLLVCWHAR
Trigger: CCTCGCGTGCCAACACACTAGCAACTTCAGACGTCAGCAGGCGGAAATGGCTGATTCCAGGTGCAGAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CAA 90 bp ATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCCTTTCTTCACTCCATTaGGCACCGGTTCAGGGCAAG +
Preference number: 3 (lower is better)
Translates to: IRSCKILEALLAALKRSLLSSLH*APVQGK
Trigger: CTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAAG...GAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTCACGGGGTGGTGGCTaGTATTTCAAAGGGTTTATC +
Preference number: 3 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSRGGG*YFKGFI
Trigger: GATAAACCCTTTGAAATACAAGCCACCACCCCGTGA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR-3UTR CAA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCCTTTCTTCACTCCATTaGGCACCGGTTCAGGGCAAG +
Preference number: 3 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPLSSLH*APVQGK
Trigger: CTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAAG...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR-3UTR CAA 90 bp GGGTTGGAAGCAGAAGTGAGATTCCTCTCAGGTAACTGCTTGTTTTCCCTTTGTGAGCAACTATCCACATaGCAGTCTGGTTGTGACGTG +
Preference number: 3 (lower is better)
Translates to: GLEAEVRFLSGNCLFSLCEQLST*QSGCDV
Trigger: CACGTCACAACCAGACTGCAATGTGGATAGTTGCTC...ACAAAGGGAAAACAAGCAGTTACCTGAGAGGAATCTCACTTCTGCTTCCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR TCA 72 bp ACTCGGCAGAATGTGGACAACTTTACCTCTGGTGGATaGTTTGGGTTGGAAGCAGAAGTGAGATTCCTCTCA +
Preference number: 3 (lower is better)
Translates to: TRQNVDNFTSGG*FGLEAEVRFLS
Trigger: TGAGAGGAATCTCACTTCTGCTTCCAACCCAAATCATCCACCAGAGGTAAAGTTGTCCACATTCTGCCGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR CCA 72 bp GTTCACTCGGCAGAATGTGGACAACTTTACCTCTGGTaGATGATTTGGGTTGGAAGCAGAAGTGAGATTCCT +
Preference number: 3 (lower is better)
Translates to: VHSAECGQLYLW*MIWVGSRSEIP
Trigger: AGGAATCTCACTTCTGCTTCCAACCCAAATCATCCACCAGAGGTAAAGTTGTCCACATTCTGCCGAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR TCA 72 bp CTTCCAAGGCTTCCTGATTTAATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTG +
Preference number: 3 (lower is better)
Translates to: LPRLPDLILSVK*FVLQEKASCLV
Trigger: CACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAATCAGGAAGCCTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR GCA 72 bp TGCCATATCCACTGCTTACTGAGCAACTATCCACATTaGAGTCTGGTTGTGACGTGGACATTTCTTGCTGTA +
Preference number: 3 (lower is better)
Translates to: CHIHCLLSNYPH*SLVVTWTFLAV
Trigger: TACAGCAAGAAATGTCCACGTCACAACCAGACTGCAATGTGGATAGTTGCTCAGTAAGCAGTGGATATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CAA 90 bp AGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCCTCCTCCTGTATATGTaGAATTTGGTTGTGGAACTG +
Preference number: 3 (lower is better)
Translates to: SVMRTEPSSRLILSKRSSLLLYM*NLVVEL
Trigger: CAGTTCCACAACCAAATTCAACATATACAGGAGGAG...GGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATCACGGGGTGGTGGCTaGTATTTCAAAGGGTTTATC +
Preference number: 3 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSRGGG*YFKGFI
Trigger: GATAAACCCTTTGAAATACAAGCCACCACCCCGTGA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR-3UTR CAA 90 bp TCAATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCAGACATCCAAGCATTaGGAGTTTCATCTGGTTTAC +
Preference number: 3 (lower is better)
Translates to: SIRSCKILEALLAALKRSQTSKH*EFHLVY
Trigger: GTAAACCAGATGAAACTCCAAATGCTTGGATGTCTG...AGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR GCA 72 bp GCAGGTGCTACATACTGTCCTTTGGGAACATCTATGTaGTCCATGAACTCCTTAGGGTCTTTAGATTTGTAC +
Preference number: 3 (lower is better)
Translates to: AGATYCPLGTSM*SMNSLGSLDLY
Trigger: GTACAAATCTAAAGACCCTAAGGAGTTCATGGAGCACATAGATGTTCCCAAAGGACAGTATGTAGCACCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR CCA 72 bp CTCTGTGAGGCCGAATTAAGTCTCTTTTGTCTCTGTTaGGCACACTTTTCTGGAGAACGACTTGCATTAACT +
Preference number: 3 (lower is better)
Translates to: LCEAELSLFCLC*AHFSGERLALT
Trigger: AGTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAGACTTAATTCGGCCTCACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CAA 90 bp TTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTGGCAACTATCTGTTCTaGGCATTGTTTTTCCACCAA +
Preference number: 3 (lower is better)
Translates to: LEALLAALKRSLKSFTSIGNYLF*ALFFHQ
Trigger: TTGGTGGAAAAACAATGCCAAGAACAGATAGTTGCC...AATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATTATCTGTCCATTTATaGTCCAGGGTGGGACACAAG +
Preference number: 3 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLSVHL*SRVGHK
Trigger: CTTGTGTCCCACCCTGGACAATAAATGGACAGATAA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR TCA 72 bp GTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTaGAGCGTTCTCTCAAATCATTCACTTCAATTTCCA +
Preference number: 3 (lower is better)
Translates to: VPAKFWKHCWLH*SVLSNHSLQFP
Trigger: TGGAAATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
3UTR GCA 72 bp TTATCAACATGTACCGAGCTGGAATATGTGGGGCACTaGGTTCTGATTGGCTACCAAAAACTAAGTAGTTAC +
Preference number: 3 (lower is better)
Translates to: LSTCTELEYVGH*VLIGYQKLSSY
Trigger: GTAACTACTTAGTTTTTGGTAGCCAATCAGAACGCAGTGCCCCACATATTCCAGCTCGGTACATGTTGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR CCA 72 bp TTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTaGCATTGTTTTTCCACCAAATTGAATAGCTGTAAC +
Preference number: 3 (lower is better)
Translates to: LWNCSCWATICS*HCFSTKLNSCN
Trigger: GTTACAGCTATTCAATTTGGTGGAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
3UTR GCA 72 bp AATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTaGACTGAAGCGTTCTCTCAAATCATTCACTTCAAT +
Preference number: 3 (lower is better)
Translates to: NSFLQNFGSTAG*TEAFSQIIHFN
Trigger: ATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
3UTR CCA 72 bp TACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATaGAATTTCTTTAGCGTCATGCGAACTGAACCCAGT +
Preference number: 3 (lower is better)
Translates to: YKSQRFAEVRKT*NFFSVMRTEPS
Trigger: ACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
3UTR CCA 72 bp CTTGAACCTCCATCTTCTACATGTGCTCTCTTTGGTTaGTTCTGCTTCAGTTTTTGTGCCCATGATGTTATA +
Preference number: 3 (lower is better)
Translates to: LEPPSSTCALFG*FCFSFCAHDVI
Trigger: TATAACATCATGGGCACAAAAACTGAAGCAGAACCAACCAAAGAGAGCACATGTAGAAGATGGAGGTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CAA 90 bp ATATCCTTCAGTGACGGTAGCTTCATCTCATTACTAGTATTAGACTGGTTTGGTCTACATGTGCTCTCTTaGGTTGGTTCTGCTTCAGTT +
Preference number: 3 (lower is better)
Translates to: ISFSDGSFISLLVLDWFGLHVLS*VGSASV
Trigger: AACTGAAGCAGAACCAACCAAAGAGAGCACATGTAG...ACCAAACCAGTCTAATACTAGTAATGAGATGAAGCTACCGTCACTGAAGGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CAA 90 bp CTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAAGTATATCAAATCGAATaGGACTGCTCTCATTTTTGC +
Preference number: 3 (lower is better)
Translates to: LKDLQRCAKHGISLASCEVYQIE*DCSHFC
Trigger: GCAAAAATGAGAGCAGTCCAATTCGATTTGATATAC...TTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CAA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTAGTTGCTTTCTTGGATaGGTACGTTGTAATGTAGAC +
Preference number: 3 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILSCFLG*VRCNVD
Trigger: GTCTACATTACAACGTACCAATCCAAGAAAGCAACT...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR TCA 72 bp ATCCAGGAACACATTAAAGGTGGTCTTACTAGGTCTTaGCACAAGCTGTACTGGAGCTTGATTAAAATGAAC +
Preference number: 3 (lower is better)
Translates to: IQEHIKGGLTRS*HKLYWSLIKMN
Trigger: GTTCATTTTAATCAAGCTCCAGTACAGCTTGTGTCAAGACCTAGTAAGACCACCTTTAATGTGTTCCTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR GCA 72 bp TCTGGAGAACGACTTGCATTAACTGAAGTTTCAGTTTaGCGAGGATTTATATTTGAGGTGTCCTCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: SGERLALTEVSV*RGFIFEVSSFS
Trigger: AGAGAAAGAGGACACCTCAAATATAAATCCTCGGCAAACTGAAACTTCAGTTAATGCAAGTCGTTCTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR-3UTR CAA 90 bp AATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTCTGTATATGTTGAATTaGGTTGTGGAACTGCTCCTG +
Preference number: 3 (lower is better)
Translates to: NGYKSQRFAEVRKTWNFFLYMLN*VVELLL
Trigger: CAGGAGCAGTTCCACAACCAAATTCAACATATACAG...AAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR TCA 72 bp CAATCTATTACACACTTCAAATATCAAAGCATATGCTaGGAGAGAGGCGCAGAAGATGTTTTGATGGAGGTT +
Preference number: 3 (lower is better)
Translates to: QSITHFKYQSIC*ERGAEDVLMEV
Trigger: AACCTCCATCAAAACATCTTCTGCGCCTCTCTCTCAGCATATGCTTTGATATTTGAAGTGTGTAATAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR GCA 72 bp TTGAATAGCTGTAACCACCTGGTACTTAGCAGTTGCTaGTATCGAATTCTTAAACCAGGTAATCTTTCATTT +
Preference number: 3 (lower is better)
Translates to: LNSCNHLVLSSC*YRILKPGNLSF
Trigger: AAATGAAAGATTACCTGGTTTAAGAATTCGATAGCAGCAACTGCTAAGTACCAGGTGGTTACAGCTATTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
3UTR CAA 72 bp AAAGGTTCAACTGCACTGTCAGACAGGCCACCCTCCTaGCTGAGAAGGGAGCAGGGCTGTGGACCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KGSTALSDRPPS*LRREQGCGPLA
Trigger: GGCCAGGGGTCCACAGCCCTGCTCCCTTCTCAGCAAGGAGGGTGGCCTGTCTGACAGTGCAGTTGAACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGGCCGCCGCTCCCGCTaGCGATGTCAGGGTCATGCA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRGRRSR*RCQGHA
Trigger: TGCATGACCCTGACATCGGCAGCGGGAGCGGCGGCC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR CCA 90 bp CAGGCGCCCACCCCCACACCATGCCCGGCTAATTTTTGTACTTTAGTAGAGACGGGGGGCTGGGCACAGTaGCTGGAACTCCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: QAPTPTPCPANFCTLVETGGWAQ*LELLTS
Trigger: TGAGGTCAGGAGTTCCAGCCACTGTGCCCAGCCCCC...CGTCTCTACTAAAGTACAAAAATTAGCCGGGCATGGTGTGGGGGTGGGCGCCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR TCA 90 bp TGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTGGCTAGATCCCCTGTGGAGTGACTaGAACCGGCTTACACTGTTC +
Preference number: 4 (lower is better)
Translates to: WSLLPRSLQLHDSSIWLDPLWSD*NRLTLF
Trigger: GAACAGTGTAAGCCGGTTTCAGTCACTCCACAGGGG...ATCTAGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTGGGCTGGAGCCCTCTaGAAGGCCGAGGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRWAGAL*KAEGKA
Trigger: TGCCTTCCCCTCGGCCTTGCAGAGGGCTCCAGCCCA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTATAGGCGTGAGCCCCTaGGCCCGGCCTACGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PPGEGILLSAASIWSFSFIGVSP*ARPTAH
Trigger: GTGAGCCGTAGGCCGGGCGCAGGGGCTCACGCCTAT...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR GCA 90 bp GAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATAAGAGAGATGGTCCCTaGTCCCGCGGAGCTTACAGC +
Preference number: 4 (lower is better)
Translates to: EREMVPAPAELTASRLQHKRDGP*SRGAYS
Trigger: GCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTT...ATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CCA 90 bp GTGCCTGTAGTGCAAGAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTGCAAGAAAGAGAGATaGTCCCTGCTCCCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: VPVVQEREMVPAPAELTACKKER*SLLPRS
Trigger: GCTCCGCGGGAGCAGGGACCATCTCTCTTTCTTGCA...AGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTCTTGCACTACAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR GCA 90 bp TGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCCGGCCGCCGCTCCCGCTaGCGATGTCAGGGTCATGCA +
Preference number: 4 (lower is better)
Translates to: WLWNCSCWATICSWHCFSGRRSR*RCQGHA
Trigger: TGCATGACCCTGACATCGGCAGCGGGAGCGGCGGCC...GGAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535049.5
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGACAGAGGCAGTGGGCTaGAGCCCTCTGCAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRTEAVG*SPLQGR
Trigger: TCGGCCTTGCAGAGGGCTCCAGCCCACTGCCTCTGT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGCACACCATCTACAAGTaGCTCAGCCGGCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: KVIRPPGEGILLSAASIWHTIYK*LSRHRR
Trigger: CCTGCGGTGCCGGCTGAGTCACTTGTAGATGGTGTG...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCACACCATCTACAAGTaGCTCAGCCGGCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRHTIYK*LSRHRR
Trigger: CCTGCGGTGCCGGCTGAGTCACTTGTAGATGGTGTG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTCTGGGACTGACTGACTaGGGCCGAAGCAACCATGAC +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSLGLTD*GRSNHD
Trigger: GTCATGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAG...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCTACCACAGAGGCAGTaGGCTGGAGCCCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRLPQRQ*AGALCK
Trigger: CTTGCAGAGGGCTCCAGCCCACTGCCTCTGTGGTAG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCTGGGACTGACTGACTaGGGCCGAAGCAACCATGAC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRLGLTD*GRSNHD
Trigger: GTCATGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGAAGCTGGGACTGACTaGCTGAGGCCGAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQREAGTD*LRPKQP
Trigger: TGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGCCGGCACCGCAGGTaGTACATACTGTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSRHRR*YILSFG
Trigger: CCCAAAGGACAGTATGTAGCACCTGCGGTGCCGGCT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGAGCCGGCACCGCAGGTaGTACATACTGTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: KVIRPPGEGILLSAASIWSRHRR*YILSFG
Trigger: CCCAAAGGACAGTATGTAGCACCTGCGGTGCCGGCT...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp CAGGCGCCCACCCCCACACCATGCCCGGCTAATTTTTGTACTTTAGTAGAGACGGGAAGCACTGCTGGCTaGACTGAAGCGTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: QAPTPTPCPANFCTLVETGSTAG*TEAFSQ
Trigger: TTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCC...CGTCTCTACTAAAGTACAAAAATTAGCCGGGCATGGTGTGGGGGTGGGCGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTCCACGTTACTGTCCTaGGTGTCCAGAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSTLLS*VSRGWP
Trigger: TGGCCAGCCTCTGGACACCCAGGACAGTAACGTGGA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTGGCTAGATTTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: WSLLPRSLQLHDSSIWLDFLHSI*HRFRAR
Trigger: TCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA...ATCTAGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTAAAGAAGTTGGGGGCTaGGCACAGTGGCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSKEVGG*AQWLEL
Trigger: GAGTTCCAGCCACTGTGCCCAGCCCCCAACTTCTTT...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539024.5
3UTR CAA 72 bp GACTCAGCCGGCACCGCAGGTGCTACATACTGTCCTTaGGGAACATCTATGTGCTCCATGAACTCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: DSAGTAGATYCP*GTSMCSMNSLG
Trigger: CCCTAAGGAGTTCATGGAGCACATAGATGTTCCCAAAGGACAGTATGTAGCACCTGCGGTGCCGGCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGCCATTTCCGCCTGCTaGCGTCTGAAGTTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRAISAC*RLKLLV
Trigger: CACTAGCAACTTCAGACGTCAGCAGGCGGAAATGGC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp GAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTGGCTTTTTTGCTAAGCAGATaGCTAAATCCTGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: EMVPAPAELTASRLQHLAFLLSR*LNPGDK
Trigger: CTTGTCCCCAGGATTTAGTCATCTGCTTAGCAAAAA...AGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCCCCTGTGGAGTGACTaGAACCGGCTTACACTGTTC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRPLWSD*NRLTLF
Trigger: GAACAGTGTAAGCCGGTTTCAGTCACTCCACAGGGG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCAGAGGAGAGACTCCTaGCCACGTGCTACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRQRRDS*PRATSE
Trigger: CTCAGAAGTAGCACGTGGGCAGGAGTCTCTCCTCTG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTGGCTAGATTTTAGGGGATCGCTTTaGACTATAAGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: WSLLPRSLQLHDSSIWLDFRGSL*TISHSH
Trigger: GTGACTGTGGCTTATAGTCCAAAGCGATCCCCTAAA...ATCTAGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CCA 90 bp TTTTATCTCCTCCTGTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGCACTTCCAAGAGAGTCTaGCCGCCGCTCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FYLLLYMLNLVVELLLLGTSKRV*PPLPLP
Trigger: CGGCAGCGGGAGCGGCGGCCAGACTCTCTTGGAAGT...GCCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAGGAGATAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR TCA 90 bp AGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCCAGCCTGGAAGCTGGGACTaGCTGACTGAGGCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: STAGCTEAFSQIIHFNFQPGSWD*LTEAEA
Trigger: TGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTCCAGG...CTGGAAATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606326.1
CDS-3UTR TCA 90 bp GAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATTCAGGGCAAGAGCTATaGTTAACATGGTTATCGGTG +
Preference number: 4 (lower is better)
Translates to: EREMVPAPAELTASRLQHSGQEL*LTWLSV
Trigger: CACCGATAACCATGTTAATCATAGCTCTTGCCCTGA...ATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR TCA 90 bp GCCTGTAGTGCAAGAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCCTGTTCGTAGCTAACTaGTTTATTCTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ACSARKRDGPCSRGAYSFLFVAN*FILLPG
Trigger: GCCTGGGAGAAGAATAAATCAGTTAGCTACGAACAG...GAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTCTTGCACTACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR TCA 90 bp GCCTGTAGTGCAAGAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ACSARKRDGPCSRGAYSFILSVK*FVLQEK
Trigger: CTTCTCCTGGAGGACGAATCACTTTACAGACAAGAT...GAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTCTTGCACTACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGGAAGCACTGCTGGCTaGACTGAAGCGTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRGSTAG*TEAFSQ
Trigger: TTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATGGGCTGGAGCCCTCTaGAAGGCCGAGGGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKWAGAL*KAEGKA
Trigger: TGCCTTCCCCTCGGCCTTGCAGAGGGCTCCAGCCCA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGAGCAAAGGTTCAACTaGACTGTCAGACAGGCCACC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQREQRFN*TVRQAT
Trigger: GGTGGCCTGTCTGACAGTGCAGTTGAACCTTTGCTC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATTCTGGGACACTGTTaGCTGTACCTGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRILGHC*LYLEAG
Trigger: CCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp CAGGCGCCCACCCCCACACCATGCCCGGCTAATTTTTGTACTTTAGTAGAGACGGTTCCTGCAAAATTTTaGAAGCACTGCTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: QAPTPTPCPANFCTLVETVPAKF*KHCWLH
Trigger: GTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAAC...CGTCTCTACTAAAGTACAAAAATTAGCCGGGCATGGTGTGGGGGTGGGCGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR CCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTGGAATACTCTGCACCTaGAATCAGCCATTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSGILCT*NQPFPP
Trigger: AGGCGGAAATGGCTGATTCCAGGTGCAGAGTATTCC...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAACTTCCAAGAGAGTCTaGCCGCCGCTCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKTSKRV*PPLPLP
Trigger: CGGCAGCGGGAGCGGCGGCCAGACTCTCTTGGAAGT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGACCTGCCAATGCTCCTaGATCAGAGGAGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRTCQCS*IRGETP
Trigger: AGGAGTCTCTCCTCTGATCCAGGAGCATTGGCAGGT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCAACATGTACCGAGCTaGAATATGTGGGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRQHVPS*NMWGTA
Trigger: CGCAGTGCCCCACATATTCCAGCTCGGTACATGTTG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp GAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCACGACTCCAGCATCTaGCTAGATTCAGAAACAACT +
Preference number: 4 (lower is better)
Translates to: EREMVPAPAELTASRLQHHDSSI*LDSETT
Trigger: AGTTGTTTCTGAATCTAGCCAGATGCTGGAGTCGTG...ATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR TCA 90 bp GTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCAAGCACACCATCTACAAGTaGCTCAGCCGGCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: VMRTEPSSRLILSKRSSKHTIYK*LSRHRR
Trigger: CCTGCGGTGCCGGCTGAGTCACTTGTAGATGGTGTG...CTTGGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp TCAATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTGGGACTGACTGACTaGGGCCGAAGCAACCATGAC +
Preference number: 4 (lower is better)
Translates to: SIRSCKILEALLAALKRSLGLTD*GRSNHD
Trigger: GTCATGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAG...AGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606326.1
CDS-3UTR TCA 90 bp TTTCTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTCCTGGAAGCTGGGACTaGCTGACTGAGGCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: FLHSIWHRFRARAMINMVPGSWD*LTEAEA
Trigger: TGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTCCAGG...AACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCACTGCTGGCTGCACTaGAGCGTTCTCTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRHCWLH*SVLSNH
Trigger: ATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTGGTCTGGTCTTCCCTaGGAAAGAGGATACCCCATT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRWSGLP*ERGYPI
Trigger: AATGGGGTATCCTCTTTCTCAGGGAAGACCAGACCA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGGACCTCTGGTGGATaGTTTGGGTTGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRRTSGG*FGLEAE
Trigger: TTCTGCTTCCAACCCAAATCATCCACCAGAGGTCCT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp CTGACTGGCATCAAGCCTCTAAAGCAGATTCAAGCTAAGACATTTCACCTGATTCTGGTCTCGAACTCCTaGCCTCAGGTGACCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LTGIKPLKQIQAKTFHLILVSNS*PQVTRL
Trigger: CAGGCGGGTCACCTGAGGTCAGGAGTTCGAGACCAG...AATCAGGTGAAATGTCTTAGCTTGAATCTGCTTTAGAGGCTTGATGCCAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR TCA 90 bp GTGCCTGTAGTGCAAGAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTGCCACAAGTATTTATTaGGTGCCTGTAGTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: VPVVQEREMVPAPAELTAATSIY*VPVVQE
Trigger: TTCTTGCACTACAGGCACTCAATAAATACTTGTGGC...AGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTCTTGCACTACAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACCGATGTCAGGGTCATaGAAGCGGCCTCTCGCGACC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKPMSGS*KRPLAT
Trigger: GGTCGCGAGAGGCCGCTTGCATGACCCTGACATCGG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR GCA 90 bp GCCTGTAGTGCAAGAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCGGAAGAAACTGGAGTTaGTTTCTTGGATTGGTACGT +
Preference number: 4 (lower is better)
Translates to: ACSARKRDGPCSRGAYSFGRNWS*FLGLVR
Trigger: ACGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCC...GAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTCTTGCACTACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGGACAGCTGAAGCCATaGACACTAAGAAAACCAGGC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRGQLKP*TLRKPG
Trigger: GCCTGGTTTTCTTAGTGTGCATGGCTTCAGCTGTCC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGACACAAACCTGCCAATaGTCCTGGATCAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRTQTCQ*SWIRGE
Trigger: CTCTCCTCTGATCCAGGAGCATTGGCAGGTTTGTGT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGTCCCAACACAAACCTaGCAATGCTCCTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRVPTQT*QCSWIR
Trigger: TCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGAC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp GTGCCTGTAGTGCAAGAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTAGATTCAGAAACAACTaGAGCAAGCACTTGTCTACC +
Preference number: 4 (lower is better)
Translates to: VPVVQEREMVPAPAELTARFRNN*SKHLST
Trigger: GGTAGACAAGTGCTTGCTGCAGTTGTTTCTGAATCT...AGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTCTTGCACTACAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CCA 90 bp CAGGCGCCCACCCCCACACCATGCCCGGCTAATTTTTGTACTTTAGTAGAGACGATACTGACGGAAACGTaGAACTGGTCCTACTTTCGT +
Preference number: 4 (lower is better)
Translates to: QAPTPTPCPANFCTLVETILTET*NWSYFR
Trigger: ACGAAAGTAGGACCAGTTCCACGTTTCCGTCAGTAT...CGTCTCTACTAAAGTACAAAAATTAGCCGGGCATGGTGTGGGGGTGGGCGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR CCA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTAAGTTGCTAGTGTGTTaGCACGCGAGGGTCTCACGT +
Preference number: 4 (lower is better)
Translates to: PPGEGILLSAASIWSFSFKLLVC*HARVSR
Trigger: ACGTGAGACCCTCGCGTGCCAACACACTAGCAACTT...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGGAATACTCTGCACCTaGAATCAGCCATTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRGILCT*NQPFPP
Trigger: AGGCGGAAATGGCTGATTCCAGGTGCAGAGTATTCC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTGGGTGTCCAGAGGCTaGCCAGTAAAGATGGAATAC +
Preference number: 4 (lower is better)
Translates to: KVIRPPGEGILLSAASIWWVSRG*PVKMEY
Trigger: GTATTCCATCTTTACTGGCCAGCCTCTGGACACCCA...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTGGGTGTCCAGAGGCTaGCCAGTAAAGATGGAATAC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRWVSRG*PVKMEY
Trigger: GTATTCCATCTTTACTGGCCAGCCTCTGGACACCCA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp CTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCTCCACGTTACTGTCCTaGGTGTCCAGAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LHSIWHRFRARAMINMVISTLLS*VSRGWP
Trigger: TGGCCAGCCTCTGGACACCCAGGACAGTAACGTGGA...GATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp AACAGGCAAGCAGCGGGCACAAATAGATTTGACTCAGAGATCACGCTTTTGAACTCCACGTTACTGTCCTaGGTGTCCAGAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NRQAAGTNRFDSEITLLNSTLLS*VSRGWP
Trigger: TGGCCAGCCTCTGGACACCCAGGACAGTAACGTGGA...GTTCAAAAGCGTGATCTCTGAGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCAGGTTTCCTCCAGCTaGTTATCCACGTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRQVSSS*LSTLLS
Trigger: GGACAGTAACGTGGATAACCAGCTGGAGGAAACCTG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSFLHSI*HRFRAR
Trigger: TCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp GTGACTCAGCCGGCACCGCAGGTGCTACATACTGTCCTTTGGGAACATCTATGTCTCTGGTGGATGATTTaGGTTGGAAGCAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: VTQPAPQVLHTVLWEHLCLWWMI*VGSRSE
Trigger: CTCACTTCTGCTTCCAACCCAAATCATCCACCAGAG...ACATAGATGTTCCCAAAGGACAGTATGTAGCACCTGCGGTGCCGGCTGAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGTCAGGACCTCTGGTaGATGATTTGGGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSQDLW*MIWVGS
Trigger: GCTTCCAACCCAAATCATCCACCAGAGGTCCTGACT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAACAGAGGCAGTGGGCTaGAGCCCTCTGCAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKTEAVG*SPLQGR
Trigger: TCGGCCTTGCAGAGGGCTCCAGCCCACTGCCTCTGT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TTTCTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTAGCCTCCCGAGTAGCTaGAATTACAGGCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: FLHSIWHRFRARAMINMVSLPSS*NYRRPP
Trigger: GGGTGGGCGCCTGTAATTCCAGCTACTCGGGAGGCT...AACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATTGCAGTCTGGTTGTaGCGTGGACATTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRIAVWL*RGHFLL
Trigger: CAGCAAGAAATGTCCACGTCACAACCAGACTGCAAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGTGAGGTTGAATCCCTaGAATCTGCTGCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRVRLNP*NLLLWL
Trigger: AAGCCAAAGCAGCAGATTTCAGGGATTCAACCTCAC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTAGGCCGAAGCAACCATaGCAGTGTTTTCTTCATCTA +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSRPKQP*QCFLHL
Trigger: TAGATGAAGAAAACACTGTCATGGTTGCTTCGGCCT...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR TCA 90 bp ACGCGACTAGTAGCTTCATGCAAAGCACTATCTAATTGGCCACATCTGTCTACAGAAGCTGGGACTGACTaGCTGAGGCCGAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: TRLVASCKALSNWPHLSTEAGTD*LRPKQP
Trigger: TGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTC...TGTAGACAGATGTGGCCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606326.1
CDS-3UTR TCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTCCTGGAAGCTGGGACTaGCTGACTGAGGCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSPGSWD*LTEAEA
Trigger: TGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTCCAGG...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACCTGGAAGCTGGGACTaGCTGACTGAGGCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKPGSWD*LTEAEA
Trigger: TGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTCCAGG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACAAGTGACTCAGCCGGCACCGCAGGTGCTACATACTGTCCTTTGGGAACATCTACGACTTGCATTAACTaGAGTTTCAGTTTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TSDSAGTAGATYCPLGTSTTCIN*SFSLPR
Trigger: CCTCGGCAAACTGAAACTTCAGTTAATGCAAGTCGT...AGATGTTCCCAAAGGACAGTATGTAGCACCTGCGGTGCCGGCTGAGTCACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTCTGTTCGTAGCTAACTaGTTTATTCTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSLFVAN*FILLPG
Trigger: GCCTGGGAGAAGAATAAATCAGTTAGCTACGAACAG...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp AGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCCCCCTGTGGAGTGACTaGAACCGGCTTACACTGTTC +
Preference number: 4 (lower is better)
Translates to: SVMRTEPSSRLILSKRSSPLWSD*NRLTLF
Trigger: GAACAGTGTAAGCCGGTTTCAGTCACTCCACAGGGG...GGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTCCCCTGTGGAGTGACTaGAACCGGCTTACACTGTTC +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSAPLWSD*NRLTLF
Trigger: GAACAGTGTAAGCCGGTTTCAGTCACTCCACAGGGG...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGGTTGGAAGCAGAAGTaGGATTCCTCTCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRGWKQK*DSSQVT
Trigger: AGTTACCTGAGAGGAATCTCACTTCTGCTTCCAACC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACCCACGTGCTACTTCTaGGAGCCAGCGGCTACCACA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKPTCYF*EPAATT
Trigger: TGTGGTAGCCGCTGGCTCTCAGAAGTAGCACGTGGG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATTTGGTTGTGGAACTaGTCCTGCTGGGCAACTATC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRIWLWN*SCWATI
Trigger: GATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGAATATGTGGGGCACTaGGTTCTGATTGGCTACCAA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQREYVGH*VLIGYQ
Trigger: TTGGTAGCCAATCAGAACGCAGTGCCCCACATATTC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTACGGAAACGTGGAACTaGTCCTACTTTCGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSTETWN*SYFRFG
Trigger: TCCAAAACGAAAGTAGGACCAGTTCCACGTTTCCGT...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CCA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTGGAATACTCTGCACCTaGAATCAGCCATTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: PPGEGILLSAASIWSFSFGILCT*NQPFPP
Trigger: AGGCGGAAATGGCTGATTCCAGGTGCAGAGTATTCC...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp GGTGCTGAGGATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATGGGTGTCCAGAGGCTaGCCAGTAAAGATGGAATAC +
Preference number: 4 (lower is better)
Translates to: GAEDTRETRNRQAAGTNRWVSRG*PVKMEY
Trigger: GTATTCCATCTTTACTGGCCAGCCTCTGGACACCCA...TCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTATCCTCAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CCA 90 bp TTTCTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTTCCACGTTACTGTCCTaGGTGTCCAGAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FLHSIWHRFRARAMINMVSTLLS*VSRGWP
Trigger: TGGCCAGCCTCTGGACACCCAGGACAGTAACGTGGA...AACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp TTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCCACGTTACTGTCCTaGGTGTCCAGAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LEALLAALKRSLKSFTSISTLLS*VSRGWP
Trigger: TGGCCAGCCTCTGGACACCCAGGACAGTAACGTGGA...AATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp CAGGCGCCCACCCCCACACCATGCCCGGCTAATTTTTGTACTTTAGTAGAGACGTTGGGCACACTTTTCTaGAGAACGACTTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: QAPTPTPCPANFCTLVETLGTLF*RTTCIN
Trigger: GTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAA...CGTCTCTACTAAAGTACAAAAATTAGCCGGGCATGGTGTGGGGGTGGGCGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR CCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTAGGGGATCGCTTTaGACTATAAGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSFRGSL*TISHSH
Trigger: GTGACTGTGGCTTATAGTCCAAAGCGATCCCCTAAA...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: KVIRPPGEGILLSAASIWFLHSI*HRFRAR
Trigger: TCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp GTGCCTGTAGTGCAAGAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTAGTGCTGCCTCAATCTaGTCCTTTTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: VPVVQEREMVPAPAELTASAASI*SFSFVS
Trigger: ACTTACAAAAGAAAAGGACCAGATTGAGGCAGCACT...AGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTCTTGCACTACAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CCA 90 bp TGTTTTTCCACCAAATTGAATAGCTGTAACCACCTGGTCTCACAGTTTTTCCAAACTTCCAAGAGAGTCTaGCCGCCGCTCCCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: CFSTKLNSCNHLVSQFFQTSKRV*PPLPLP
Trigger: CGGCAGCGGGAGCGGCGGCCAGACTCTCTTGGAAGT...TTGGAAAAACTGTGAGACCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535049.5
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACTACCACAGAGGCAGTaGGCTGGAGCCCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLPQRQ*AGALCK
Trigger: CTTGCAGAGGGCTCCAGCCCACTGCCTCTGTGGTAG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTAGTCAATCCTGTTCCTaGATCAGACATCCAAGCATT +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSSQSCS*IRHPSI
Trigger: AATGCTTGGATGTCTGATTCAGGAACAGGATTGACT...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTGGAAATCCAGGTAACTaGGAAGTGACATTACTTGCT +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSGNPGN*EVTLLA
Trigger: AGCAAGTAATGTCACTTCTCAGTTACCTGGATTTCC...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR TCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTAGTAATGGTATATACTaGCGGAAACGTGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSSNGIY*RKRGTG
Trigger: ACCAGTTCCACGTTTCCGTCAGTATATACCATTACT...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGGCCGAAGCAACCATaGCAGTGTTTTCTTCATCTA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRRPKQP*QCFLHL
Trigger: TAGATGAAGAAAACACTGTCATGGTTGCTTCGGCCT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACTGGGACTGACTGACTaGGGCCGAAGCAACCATGAC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLGLTD*GRSNHD
Trigger: GTCATGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGAGAAGCTGGGACTGACTaGCTGAGGCCGAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: FFSVMRTEPSSRLILSKREAGTD*LRPKQP
Trigger: TGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTC...TCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGAAGCTGGGACTGACTaGCTGAGGCCGAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKEAGTD*LRPKQP
Trigger: TGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCCACCCACTGCTGGCTGCACTaGAGCGTTCTCTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: LWNCSCWATICSWHCFSTHCWLH*SVLSNH
Trigger: ATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTG...GGTGGAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp ATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCCACTGCTGGCTGCACTaGAGCGTTCTCTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: IRSCKILEALLAALKRSLHCWLH*SVLSNH
Trigger: ATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTG...GAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
CDS-3UTR TCA 90 bp ATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTCAGGCCATTTCCGCCTGCTaGCGTCTGAAGTTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: IQEKPETGKQRAQIDLTQAISAC*RLKLLV
Trigger: CACTAGCAACTTCAGACGTCAGCAGGCGGAAATGGC...CTGAGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR TCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTCCGAGGATTTATATTTaGGGTGTCCTCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSPRIYI*GVLFLC
Trigger: ACAGAGAAAGAGGACACCTCAAATATAAATCCTCGG...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGACGACTTGCATTAACTaGAGTTTCAGTTTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRTTCIN*SFSLPR
Trigger: CCTCGGCAAACTGAAACTTCAGTTAATGCAAGTCGT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTTTGCTAAGCAGATaGCTAAATCCTGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSFLLSR*LNPGDK
Trigger: CTTGTCCCCAGGATTTAGTCATCTGCTTAGCAAAAA...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCAGGGCAAGAGCTATaGTTAACATGGTTATCGGTG +
Preference number: 4 (lower is better)
Translates to: KVIRPPGEGILLSAASIWSGQEL*LTWLSV
Trigger: CACCGATAACCATGTTAATCATAGCTCTTGCCCTGA...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTCAGGGCAAGAGCTATaGTTAACATGGTTATCGGTG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSGQEL*LTWLSV
Trigger: CACCGATAACCATGTTAATCATAGCTCTTGCCCTGA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGCTGTTCGTAGCTAACTaGTTTATTCTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KVIRPPGEGILLSAASIWLFVAN*FILLPG
Trigger: GCCTGGGAGAAGAATAAATCAGTTAGCTACGAACAG...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCTGTTCGTAGCTAACTaGTTTATTCTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRLFVAN*FILLPG
Trigger: GCCTGGGAGAAGAATAAATCAGTTAGCTACGAACAG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRILSVK*FVLQEK
Trigger: CTTCTCCTGGAGGACGAATCACTTTACAGACAAGAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTGCTCAAAGGTCATTTaGGAGCCTGCTTGGAATAAC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRCSKVI*EPAWNN
Trigger: GTTATTCCAAGCAGGCTCTCAAATGACCTTTGAGCA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATGGGGACCAGCCAGGTaGAGGGTGCTCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKWGPAR*RVLKGH
Trigger: ATGACCTTTGAGCACCCTTCACCTGGCTGGTCCCCA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGCGCAGAAGATGTTTTaGTGGAGGTTAACGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRAQKMF*WRLTPF
Trigger: AAAAGGCGTTAACCTCCATCAAAACATCTTCTGCGC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp CAGGCGCCCACCCCCACACCATGCCCGGCTAATTTTTGTACTTTAGTAGAGACGGAAAATACAAGGGCATaGACACCTTCTTCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: QAPTPTPCPANFCTLVETENTRA*TPSSLS
Trigger: ACTTAGAGAAGAAGGTGTTCATGCCCTTGTATTTTC...CGTCTCTACTAAAGTACAAAAATTAGCCGGGCATGGTGTGGGGGTGGGCGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR GCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTCAGGCAAAGAGTGGTaGATATCCTTTTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSSGKEW*ISFSSS
Trigger: ACTAGAGGAAAAGGATATGCACCACTCTTTGCCTGA...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTTTGTGGAACTGCTCCTaGTGGGCAACTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PPGEGILLSAASIWSFSFLWNCS*WATICS
Trigger: AGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAA...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATACTGACGGAAACGTaGAACTGGTCCTACTTTCGT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRILTET*NWSYFR
Trigger: ACGAAAGTAGGACCAGTTCCACGTTTCCGTCAGTAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTACTGTTGGCTGTACCTaGAAGCTGGGACTGACTGAC +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSATVGCT*KLGLTD
Trigger: GTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGT...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CCA 90 bp CTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCATTCTGGGACACTGTTaGCTGTACCTGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LHSIWHRFRARAMINMVIILGHC*LYLEAG
Trigger: CCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAAT...GATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTAAGTTGCTAGTGTGTTaGCACGCGAGGGTCTCACGT +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSAKLLVC*HARVSR
Trigger: ACGTGAGACCCTCGCGTGCCAACACACTAGCAACTT...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATCCACGTTACTGTCCTaGGTGTCCAGAGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSTLLS*VSRGWP
Trigger: TGGCCAGCCTCTGGACACCCAGGACAGTAACGTGGA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTTTAGGGGATCGCTTTaGACTATAAGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRFRGSL*TISHSH
Trigger: GTGACTGTGGCTTATAGTCCAAAGCGATCCCCTAAA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCCTGCTTGGAATAACTaGGATGGCTTGGTTCATTCT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRPAWNN*DGLVHS
Trigger: AGAATGAACCAAGCCATCCCAGTTATTCCAAGCAGG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATATCCACTGCTTACTaGGCAACTATCCACATTGCA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRISTAY*ATIHIA
Trigger: TGCAATGTGGATAGTTGCTCAGTAAGCAGTGGATAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTCCTTTAAAGACACATaGCACTCTTCAGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSFKDT*HSSGVC
Trigger: ACAGACTCCTGAAGAGTGTCATGTGTCTTTAAAGGA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGTCAATCCTGTTCCTaGATCAGACATCCAAGCATT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSQSCS*IRHPSI
Trigger: AATGCTTGGATGTCTGATTCAGGAACAGGATTGACT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGGAAATCCAGGTAACTaGGAAGTGACATTACTTGCT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRGNPGN*EVTLLA
Trigger: AGCAAGTAATGTCACTTCTCAGTTACCTGGATTTCC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGTAATGGTATATACTaGCGGAAACGTGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSNGIY*RKRGTG
Trigger: ACCAGTTCCACGTTTCCGTCAGTATATACCATTACT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCAGAAGCTGGGACTGACTaGCTGAGGCCGAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: IYSSPRLFSQILSSLHLAEAGTD*LRPKQP
Trigger: TGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTC...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTTCCAAGGAAGTCAATaGAATGCATTCTGGGACACT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRFQGSQ*NAFWDT
Trigger: AGTGTCCCAGAATGCATTTCATTGACTTCCTTGGAA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTCACTGCTGGCTGCACTaGAGCGTTCTCTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSAHCWLH*SVLSNH
Trigger: ATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTG...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCATGTTCTACTTGCTTaGCCTGAGCTTCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRHVLLA*PELQVL
Trigger: CAAAACTTGAAGCTCAGGTCAAGCAAGTAGAACATG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGCCATTTCCGCCTGCTaGCGTCTGAAGTTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKAISAC*RLKLLV
Trigger: CACTAGCAACTTCAGACGTCAGCAGGCGGAAATGGC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TTTTTATCTCCTCCTGTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGGCCATTTCCGCCTGCTaGCGTCTGAAGTTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: FLSPPVYVEFGCGTAPAGAISAC*RLKLLV
Trigger: CACTAGCAACTTCAGACGTCAGCAGGCGGAAATGGC...CCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAGGAGATAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCCGAGGATTTATATTTaGGGTGTCCTCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRPRIYI*GVLFLC
Trigger: ACAGAGAAAGAGGACACCTCAAATATAAATCCTCGG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp CTACTAGGTGCTGAGGATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACACCGAGGATTTATATTTaGGGTGTCCTCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLGAEDTRETRNRQAAGTPRIYI*GVLFLC
Trigger: ACAGAGAAAGAGGACACCTCAAATATAAATCCTCGG...TGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTATCCTCAGCACCTAGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTTTTTGCTAAGCAGATaGCTAAATCCTGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRFLLSR*LNPGDK
Trigger: CTTGTCCCCAGGATTTAGTCATCTGCTTAGCAAAAA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp CAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTCCCCTGTGGAGTGACTaGAACCGGCTTACACTGTTC +
Preference number: 4 (lower is better)
Translates to: QRFAEVRKTWNFFSVMRTPLWSD*NRLTLF
Trigger: GAACAGTGTAAGCCGGTTTCAGTCACTCCACAGGGG...AGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTCCCCTGTGGAGTGACTaGAACCGGCTTACACTGTTC +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSPLWSD*NRLTLF
Trigger: GAACAGTGTAAGCCGGTTTCAGTCACTCCACAGGGG...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPGEGILLSAASIWSFSFILSVK*FVLQEK
Trigger: CTTCTCCTGGAGGACGAATCACTTTACAGACAAGAT...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp TTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCTGGTCTGGTCTTCCCTaGGAAAGAGGATACCCCATT +
Preference number: 4 (lower is better)
Translates to: LVVELLLLGNYLFLALFFWSGLP*ERGYPI
Trigger: AATGGGGTATCCTCTTTCTCAGGGAAGACCAGACCA...GAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGTTTTTCCACCAAATTaGATAGCTGTAACCACCTGG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRVFPPN*IAVTTW
Trigger: CCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAAC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCTGAGATACAAAAGGTaGCATATCCACTGCTTACTG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRLRYKR*HIHCLL
Trigger: CAGTAAGCAGTGGATATGGCACCTTTTGTATCTCAG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTAGCCGGCACCGCAGGTaGTACATACTGTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILSRHRR*YILSFG
Trigger: CCCAAAGGACAGTATGTAGCACCTGCGGTGCCGGCT...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTCAGGCAAAGAGTGGTaGATATCCTTTTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSGKEW*ISFSSS
Trigger: ACTAGAGGAAAAGGATATGCACCACTCTTTGCCTGA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATAAGCTCGAAGATCTaGTATGTGTCGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRISSKI*YVSSML
Trigger: AAGCATGCTCGACACATAGCAGATCTTCGAGCTTAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ACGCGACTAGTAGCTTCATGCAAAGCACTATCTAATTGGCCACATCTGTCTACAGGAAGCACTGCTGGCTaGACTGAAGCGTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: TRLVASCKALSNWPHLSTGSTAG*TEAFSQ
Trigger: TTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCC...TGTAGACAGATGTGGCCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATTTCTTTAGCGTCATaGGAACTGAACCCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRISLAS*ELNPVL
Trigger: GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGGAAGAAACTGGAGTTaGTTTCTTGGATTGGTACGT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRGRNWS*FLGLVR
Trigger: ACGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTTTAAGACTGAGTCTTaGTCTATTACCCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KVIRPPGEGILLSAASIWFKTES*SITQAG
Trigger: TCCAGCCTGGGTAATAGAGCAAGACTCAGTCTTAAA...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR CCA 90 bp CAGGCGCCCACCCCCACACCATGCCCGGCTAATTTTTGTACTTTAGTAGAGACGAGACATCCAAGCATTTaGAGTTTCATCTGGTTTACT +
Preference number: 4 (lower is better)
Translates to: QAPTPTPCPANFCTLVETRHPSI*SFIWFT
Trigger: AGTAAACCAGATGAAACTCCAAATGCTTGGATGTCT...CGTCTCTACTAAAGTACAAAAATTAGCCGGGCATGGTGTGGGGGTGGGCGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR CCA 90 bp GTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCAAGATTCTGGGACACTGTTaGCTGTACCTGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VMRTEPSSRLILSKRSSKILGHC*LYLEAG
Trigger: CCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAAT...CTTGGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR CCA 90 bp AGGATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTAAGTTGCTAGTGTGTTaGCACGCGAGGGTCTCACGT +
Preference number: 4 (lower is better)
Translates to: RIQEKPETGKQRAQIDLTKLLVC*HARVSR
Trigger: ACGTGAGACCCTCGCGTGCCAACACACTAGCAACTT...AGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CCA 90 bp AACAGGCAAGCAGCGGGCACAAATAGATTTGACTCAGAGATCACGCTTTTGAACGGAATACTCTGCACCTaGAATCAGCCATTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: NRQAAGTNRFDSEITLLNGILCT*NQPFPP
Trigger: AGGCGGAAATGGCTGATTCCAGGTGCAGAGTATTCC...GTTCAAAAGCGTGATCTCTGAGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CCA 90 bp CTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCTGGGTGTCCAGAGGCTaGCCAGTAAAGATGGAATAC +
Preference number: 4 (lower is better)
Translates to: LHSIWHRFRARAMINMVIWVSRG*PVKMEY
Trigger: GTATTCCATCTTTACTGGCCAGCCTCTGGACACCCA...GATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp TCAATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTTGGGTGTCCAGAGGCTaGCCAGTAAAGATGGAATAC +
Preference number: 4 (lower is better)
Translates to: SIRSCKILEALLAALKRSWVSRG*PVKMEY
Trigger: GTATTCCATCTTTACTGGCCAGCCTCTGGACACCCA...AGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp TCAATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCAGGTTTCCTCCAGCTaGTTATCCACGTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: SIRSCKILEALLAALKRSQVSSS*LSTLLS
Trigger: GGACAGTAACGTGGATAACCAGCTGGAGGAAACCTG...AGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp AGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTCAGAGATCACGCTTTTGCAGGTTTCCTCCAGCTaGTTATCCACGTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: RNRQAAGTNRFDSEITLLQVSSS*LSTLLS
Trigger: GGACAGTAACGTGGATAACCAGCTGGAGGAAACCTG...CAAAAGCGTGATCTCTGAGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTTGGGCACACTTTTCTaGAGAACGACTTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRLGTLF*RTTCIN
Trigger: GTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTTTTAGGGGATCGCTTTaGACTATAAGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: PPGEGILLSAASIWSFSFFRGSL*TISHSH
Trigger: GTGACTGTGGCTTATAGTCCAAAGCGATCCCCTAAA...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGAGGTGCGCAAAACATaGAATTTCTTTAGCGTCATG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQREVRKT*NFFSVM
Trigger: CATGACGCTAAAGAAATTCCATGTTTTGCGCACCTC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCTTCAATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTATTGCAGTCTGGTTGTaGCGTGGACATTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSIRSCKILEALLAALKRIAVWL*RGHFLL
Trigger: CAGCAAGAAATGTCCACGTCACAACCAGACTGCAAT...ACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCAGGTAACTGAGAAGTaGCATTACTTGCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRQVTEK*HYLLVK
Trigger: TTTCACAAGCAAGTAATGTCACTTCTCAGTTACCTG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp GCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTAGGCCGAAGCAACCATaGCAGTGTTTTCTTCATCTA +
Preference number: 4 (lower is better)
Translates to: AEVRKTWNFFSVMRTEPSRPKQP*QCFLHL
Trigger: TAGATGAAGAAAACACTGTCATGGTTGCTTCGGCCT...ACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR TCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTAGCTTCTTTATCATCTaGGAGTTTGTAAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSSFFII*EFVSIL
Trigger: GAGAATGCTTACAAACTCTCAGATGATAAAGAAGCT...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTCTACTTGCTTGACCTaGGCTTCAAGTTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSTCLT*ASSFEI
Trigger: GATTTCAAAACTTGAAGCTCAGGTCAAGCAAGTAGA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCAGCCATTTCCGCCTGCTaGCGTCTGAAGTTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: IYSSPRLFSQILSSLHLAAISAC*RLKLLV
Trigger: CACTAGCAACTTCAGACGTCAGCAGGCGGAAATGGC...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp GGAAGCATTGTTCACGTTCACTCGGCAGAATGTGGACAACTTTACCTCTGGTGGCCGAGGATTTATATTTaGGGTGTCCTCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GSIVHVHSAECGQLYLWWPRIYI*GVLFLC
Trigger: ACAGAGAAAGAGGACACCTCAAATATAAATCCTCGG...CCACCAGAGGTAAAGTTGTCCACATTCTGCCGAGTGAACGTGAACAATGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp ACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTCAGAGATCACGCTTACGACTTGCATTAACTaGAGTTTCAGTTTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TRNRQAAGTNRFDSEITLTTCIN*SFSLPR
Trigger: CCTCGGCAAACTGAAACTTCAGTTAATGCAAGTCGT...AAGCGTGATCTCTGAGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR TCA 90 bp CTGCTTACTGAGCAACTATCCACATTGCAGTCTGGTTGTGACGTGGACATTTCTGGTTGGAAGCAGAAGTaGGATTCCTCTCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: LLTEQLSTLQSGCDVDISGWKQK*DSSQVT
Trigger: AGTTACCTGAGAGGAATCTCACTTCTGCTTCCAACC...AGAAATGTCCACGTCACAACCAGACTGCAATGTGGATAGTTGCTCAGTAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp ACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTCAGAGATCACGCTTCAGAGATCACGCTTTTaGACCCAAGAGATGTACACA +
Preference number: 4 (lower is better)
Translates to: TRNRQAAGTNRFDSEITLQRSRF*TQEMYT
Trigger: TGTGTACATCTCTTGGGTTCAAAAGCGTGATCTCTG...AAGCGTGATCTCTGAGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCGACTAGTAGCTTCATaGAAAGCACTATCTAATTGG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRRLVAS*KALSNW
Trigger: CCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGGAAGCACTGCTGGCTaGACTGAAGCGTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKGSTAG*TEAFSQ
Trigger: TTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTCTTCAATTCGTTCCTaGAAAATTTTGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSSSIRS*KILEAL
Trigger: CAGTGCTTCCAAAATTTTGCAGGAACGAATTGAAGA...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAAAGATGGAATACTCTaGACCTGGAATCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRKDGIL*TWNQPF
Trigger: AAATGGCTGATTCCAGGTGCAGAGTATTCCATCTTT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCAAATCTCAAAGATTTaGAGAGGTGCGCAAAACATG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRQISKI*RGAQNM
Trigger: CATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp CTCCTGTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTGTGGAACTGCTCCTaGTGGGCAACTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LLYMLNLVVELLLLGNYLLWNCS*WATICS
Trigger: AGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAA...CAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR CCA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTGTTTCAGGCAAAGAGTaGTGCATATCCTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: PPGEGILLSAASIWSFSFVSGKE*CISFSS
Trigger: AGAGGAAAAGGATATGCACCACTCTTTGCCTGAAAC...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp AGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCTCTAGAGTCAGGACCTaGTTTGGTGACACATCTGTG +
Preference number: 4 (lower is better)
Translates to: RCAKHGISLASCELNPVLSRVRT*FGDTSV
Trigger: CACAGATGTGTCACCAAACCAGGTCCTGACTCTAGA...GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR CCA 90 bp AGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAAACTGTTGGCTGTACCTaGAAGCTGGGACTGACTGAC +
Preference number: 4 (lower is better)
Translates to: RFAEVRKTWNFFSVMRTETVGCT*KLGLTD
Trigger: GTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGT...TTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAACTGTTGGCTGTACCTaGAAGCTGGGACTGACTGAC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKTVGCT*KLGLTD
Trigger: GTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAATTCTGGGACACTGTTaGCTGTACCTGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKILGHC*LYLEAG
Trigger: CCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAAT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp CGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAAAGTTGCTAGTGTGTTaGCACGCGAGGGTCTCACGT +
Preference number: 4 (lower is better)
Translates to: RKTWNFFSVMRTEPSSRLKLLVC*HARVSR
Trigger: ACGTGAGACCCTCGCGTGCCAACACACTAGCAACTT...TAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAAGTTGCTAGTGTGTTaGCACGCGAGGGTCTCACGT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKKLLVC*HARVSR
Trigger: ACGTGAGACCCTCGCGTGCCAACACACTAGCAACTT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGAGTGCTGCCTCAATCTaGTCCTTTTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: KVIRPPGEGILLSAASIWSAASI*SFSFVS
Trigger: ACTTACAAAAGAAAAGGACCAGATTGAGGCAGCACT...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTACTGGCATTTTCAGTaGCTAACATTCAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRYWHFQ*LTFRTV
Trigger: CACAGTTCTGAATGTTAGCCACTGAAAATGCCAGTA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCCATTTGTACTAAGGTaGGGACTACTTCTATCAGTA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRPFVLR*GLLLSV
Trigger: TACTGATAGAAGTAGTCCCCACCTTAGTACAAATGG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp GCACCTGGAATCAGCCATTTCCGCCTGCTGACGTCTGAAGTTGCTAGTGTGTTGTTACTAGTATTAGACTaGTTTGGTGACACATCTGTG +
Preference number: 4 (lower is better)
Translates to: APGISHFRLLTSEVASVLLLVLD*FGDTSV
Trigger: CACAGATGTGTCACCAAACCAGTCTAATACTAGTAA...CAACACACTAGCAACTTCAGACGTCAGCAGGCGGAAATGGCTGATTCCAGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACAACATGTACCGAGCTaGAATATGTGGGGCACTGCG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKQHVPS*NMWGTA
Trigger: CGCAGTGCCCCACATATTCCAGCTCGGTACATGTTG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp GGGTTGGAAGCAGAAGTGAGATTCCTCTCAGGTAACTGCTTGTTTTCCCTTTGTTCACTCGGCAGAATGTaGACAACTTTACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GLEAEVRFLSGNCLFSLCSLGRM*TTLPLV
Trigger: CACCAGAGGTAAAGTTGTCCACATTCTGCCGAGTGA...ACAAAGGGAAAACAAGCAGTTACCTGAGAGGAATCTCACTTCTGCTTCCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp CTGACTGGCATCAAGCCTCTAAAGCAGATTCAAGCTAAGACATTTCACCTGATTCAGGACCTGGTTTGGTaGCACATCTGTGGAAGACAA +
Preference number: 4 (lower is better)
Translates to: LTGIKPLKQIQAKTFHLIQDLVW*HICGRQ
Trigger: TTGTCTTCCACAGATGTGTCACCAAACCAGGTCCTG...AATCAGGTGAAATGTCTTAGCTTGAATCTGCTTTAGAGGCTTGATGCCAGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR TCA 90 bp TTTCTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTGTGAGGTTGAATCCCTaGAATCTGCTGCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FLHSIWHRFRARAMINMVVRLNP*NLLLWL
Trigger: AAGCCAAAGCAGCAGATTTCAGGGATTCAACCTCAC...AACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR TCA 90 bp TCAAAATTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGCTGGGACTGACTGACTaGGGCCGAAGCAACCATGAC +
Preference number: 4 (lower is better)
Translates to: SKFNGYKSQRFAEVRKTWLGLTD*GRSNHD
Trigger: GTCATGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAG...CCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAATTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACACTGCTGGCTGCACTaGAGCGTTCTCTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKHCWLH*SVLSNH
Trigger: ATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGCTTCTTTATCATCTaGGAGTTTGTAAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSFFII*EFVSIL
Trigger: GAGAATGCTTACAAACTCTCAGATGATAAAGAAGCT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTACGACTTGCATTAACTaGAGTTTCAGTTTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSATTCIN*SFSLPR
Trigger: CCTCGGCAAACTGAAACTTCAGTTAATGCAAGTCGT...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp GAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCCCTGTTCGTAGCTAACTaGTTTATTCTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EALLAALKRSLKSFTSISLFVAN*FILLPG
Trigger: GCCTGGGAGAAGAATAAATCAGTTAGCTACGAACAG...GGAAATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp AGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SVMRTEPSSRLILSKRSSILSVK*FVLQEK
Trigger: CTTCTCCTGGAGGACGAATCACTTTACAGACAAGAT...GGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATGGTCTGGTCTTCCCTaGGAAAGAGGATACCCCATT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKWSGLP*ERGYPI
Trigger: AATGGGGTATCCTCTTTCTCAGGGAAGACCAGACCA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCCTCCTCCTGTATATGTTaGATTTGGTTGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: WLWNCSCWATICSWHCFSSSCIC*IWLWNC
Trigger: GCAGTTCCACAACCAAATTCAACATATACAGGAGGA...GGAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGGACCTCTGGTGGATaGTTTGGGTTGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKRTSGG*FGLEAE
Trigger: TTCTGCTTCCAACCCAAATCATCCACCAGAGGTCCT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGGTCTTACTAGGTCTTaGCACAAGCTGTACTGGAGC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKGLTRS*HKLYWS
Trigger: GCTCCAGTACAGCTTGTGTCAAGACCTAGTAAGACC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTCTACGGCTCACTTTTTaGACCTCTACAGCTATTCAG +
Preference number: 4 (lower is better)
Translates to: IWHRFRARAMINMVIGGFLRLTF*TSTAIQ
Trigger: CTGAATAGCTGTAGAGGTTCAAAAAGTGAGCCGTAG...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR GCA 90 bp GGGTTGGAAGCAGAAGTGAGATTCCTCTCAGGTAACTGCTTGTTTTCCCTTTGTAGGTGCCATATCCACTaGTTACTGAGCAACTATCCA +
Preference number: 4 (lower is better)
Translates to: GLEAEVRFLSGNCLFSLCRCHIH*LLSNYP
Trigger: TGGATAGTTGCTCAGTAAGCAGTGGATATGGCACCT...ACAAAGGGAAAACAAGCAGTTACCTGAGAGGAATCTCACTTCTGCTTCCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp TTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCTTGGGAACATCTATGTaGTCCATGAACTCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: FLQNFGSTAGCTEAFSQILGTSM*SMNSLG
Trigger: CCCTAAGGAGTTCATGGAGCACATAGATGTTCCCAA...GATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAAAGATTTGCAGAGGTaGGCAAAACATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRKDLQR*AKHGIS
Trigger: AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTATTTGGTTGTGGAACTaGTCCTGCTGGGCAACTATC +
Preference number: 4 (lower is better)
Translates to: IWLWNCSCWATICSWHCFIWLWN*SCWATI
Trigger: GATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAAT...AAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR GCA 90 bp AAAGTTAGAGTCAGGAAGCATTGTTCACGTTCACTCGGCAGAATGTGGACAACTATTTGGTTGTGGAACTaGTCCTGCTGGGCAACTATC +
Preference number: 4 (lower is better)
Translates to: KVRVRKHCSRSLGRMWTTIWLWN*SCWATI
Trigger: GATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAAT...AGTTGTCCACATTCTGCCGAGTGAACGTGAACAATGCTTCCTGACTCTAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATCTCCTCCTGTATATaGTCACAGTTTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRISSCI*SQFFQS
Trigger: ACTTTGGAAAAACTGTGAGCATATACAGGAGGAGAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541076.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGGACAGCTGAAGCCATaGACACTAAGAAAACCAGGC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKGQLKP*TLRKPG
Trigger: GCCTGGTTTTCTTAGTGTGCATGGCTTCAGCTGTCC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAACACAAACCTGCCAATaGTCCTGGATCAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKTQTCQ*SWIRGE
Trigger: CTCTCCTCTGATCCAGGAGCATTGGCAGGTTTGTGT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGTCCCAACACAAACCTaGCAATGCTCCTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKVPTQT*QCSWIR
Trigger: TCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGAC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTAAGCATATTGCCATTTaGTCTCAAGTTAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: RPPGEGILLSAASIWSFSKHIAI*SQVSFL
Trigger: CAAGAAACTAACTTGAGAGCAAATGGCAATATGCTT...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR GCA 90 bp GAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCCTTTTCCTTCAGATTCTaGCTAATCCTGGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EALLAALKRSLKSFTSISFSFRF*LILEAG
Trigger: CCCAGCTTCCAGGATTAGGCAGAATCTGAAGGAAAA...GGAAATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606326.1
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGACATCCAAGCATTTaGAGTTTCATCTGGTTTACT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRRHPSI*SFIWFT
Trigger: AGTAAACCAGATGAAACTCCAAATGCTTGGATGTCT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp AGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCCAGATACTGACGGAAACGTaGAACTGGTCCTACTTTCGT +
Preference number: 4 (lower is better)
Translates to: STAGCTEAFSQIIHFNFQILTET*NWSYFR
Trigger: ACGAAAGTAGGACCAGTTCCACGTTTCCGTCAGTAT...CTGGAAATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606326.1
CDS-3UTR CCA 90 bp GTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCAAGGTTCCTGCAAAATTTTaGAAGCACTGCTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VMRTEPSSRLILSKRSSKVPAKF*KHCWLH
Trigger: GTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAAC...CTTGGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CCA 90 bp ACGCGACTAGTAGCTTCATGCAAAGCACTATCTAATTGGCCACATCTGTCTACAGTTCCTGCAAAATTTTaGAAGCACTGCTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TRLVASCKALSNWPHLSTVPAKF*KHCWLH
Trigger: GTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAAC...TGTAGACAGATGTGGCCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
CDS-3UTR CCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGGAATACTCTGCACCTaGAATCAGCCATTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSGILCT*NQPFPP
Trigger: AGGCGGAAATGGCTGATTCCAGGTGCAGAGTATTCC...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGGAATACTCTGCACCTaGAATCAGCCATTTCCGCCT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKGILCT*NQPFPP
Trigger: AGGCGGAAATGGCTGATTCCAGGTGCAGAGTATTCC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp CAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTCAGGTTTCCTCCAGCTaGTTATCCACGTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: QRFAEVRKTWNFFSVMRTQVSSS*LSTLLS
Trigger: GGACAGTAACGTGGATAACCAGCTGGAGGAAACCTG...AGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACAGGTTTCCTCCAGCTaGTTATCCACGTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKQVSSS*LSTLLS
Trigger: GGACAGTAACGTGGATAACCAGCTGGAGGAAACCTG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGCAACTATCTGTTCTTaGCATTGTTTTTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRATICS*HCFSTK
Trigger: TTTGGTGGAAAAACAATGCCAAGAACAGATAGTTGC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTTACTAGTATTAGACTaGTTTGGTGACACATCTGTG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRLLVLD*FGDTSV
Trigger: CACAGATGTGTCACCAAACCAGTCTAATACTAGTAA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGTCAGGACCTCTGGTaGATGATTTGGGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSQDLW*MIWVGS
Trigger: GCTTCCAACCCAAATCATCCACCAGAGGTCCTGACT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATCCCTCACGGGGTGGTaGCTTGTATTTCAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSLTGW*LVFQRV
Trigger: AACCCTTTGAAATACAAGCCACCACCCCGTGAGGGA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCATTGCAGTCTGGTTGTaGCGTGGACATTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WNFFSVMRTEPSSRLILSIAVWL*RGHFLL
Trigger: CAGCAAGAAATGTCCACGTCACAACCAGACTGCAAT...GGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCATATCCACTGCTTACTaGGCAACTATCCACATTGCA +
Preference number: 4 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPISTAY*ATIHIA
Trigger: TGCAATGTGGATAGTTGCTCAGTAAGCAGTGGATAT...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGTGAGGTTGAATCCCTaGAATCTGCTGCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKVRLNP*NLLLWL
Trigger: AAGCCAAAGCAGCAGATTTCAGGGATTCAACCTCAC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp GAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCCAGTAATGGTATATACTaGCGGAAACGTGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: EALLAALKRSLKSFTSISSNGIY*RKRGTG
Trigger: ACCAGTTCCACGTTTCCGTCAGTATATACCATTACT...GGAAATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606326.1
CDS-3UTR TCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTTTCCAAGGAAGTCAATaGAATGCATTCTGGGACACT +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSAFQGSQ*NAFWDT
Trigger: AGTGTCCCAGAATGCATTTCATTGACTTCCTTGGAA...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR TCA 90 bp TCAAAATTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGGCCATTTCCGCCTGCTaGCGTCTGAAGTTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: SKFNGYKSQRFAEVRKTWAISAC*RLKLLV
Trigger: CACTAGCAACTTCAGACGTCAGCAGGCGGAAATGGC...CCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTTTTTTGCTAAGCAGATaGCTAAATCCTGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: IWHRFRARAMINMVIGGFFLLSR*LNPGDK
Trigger: CTTGTCCCCAGGATTTAGTCATCTGCTTAGCAAAAA...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp CTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCTTTTTGCTAAGCAGATaGCTAAATCCTGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: LHSIWHRFRARAMINMVIFLLSR*LNPGDK
Trigger: CTTGTCCCCAGGATTTAGTCATCTGCTTAGCAAAAA...GATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp GTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCAAGTCAGGGCAAGAGCTATaGTTAACATGGTTATCGGTG +
Preference number: 4 (lower is better)
Translates to: VMRTEPSSRLILSKRSSKSGQEL*LTWLSV
Trigger: CACCGATAACCATGTTAATCATAGCTCTTGCCCTGA...CTTGGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp TTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCGTTTTTCCACCAAATTaGATAGCTGTAACCACCTGG +
Preference number: 4 (lower is better)
Translates to: LVVELLLLGNYLFLALFFVFPPN*IAVTTW
Trigger: CCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAAC...GAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR TCA 90 bp TTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCACTTCAACTGTACCTTaGATTACAGATGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LVVELLLLGNYLFLALFFTSTVP*ITDGLV
Trigger: GACCAGACCATCTGTAATTCAAGGTACAGTTGAAGT...GAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGGTTGGAAGCAGAAGTaGGATTCCTCTCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKGWKQK*DSSQVT
Trigger: AGTTACCTGAGAGGAATCTCACTTCTGCTTCCAACC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGGAGTGGAAAGGGGTaGACATATCCAGATGACAAC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKRSGKG*TYPDDN
Trigger: GTTGTCATCTGGATATGTTCACCCCTTTCCACTCCT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAATGAGTTCAGGAGTTTaGGACCAGCCTGGCCAATAT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKMSSGV*DQPGQY
Trigger: ATATTGGCCAGGCTGGTCTCAAACTCCTGAACTCAT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp GTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCAAGTTTACCTCTGGTGGATaGTTTGGGTTGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VMRTEPSSRLILSKRSSKFTSGG*FGLEAE
Trigger: TTCTGCTTCCAACCCAAATCATCCACCAGAGGTAAA...CTTGGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp AGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGACGTGGACATTTCTTaGTGTATTTCAGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RCAKHGISLASCELNPVLDVDIS*CISGSV
Trigger: CACAGAACCTGAAATACAGCAAGAAATGTCCACGTC...GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGCAACTATCCACATTaGAGTCTGGTTGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSNYPH*SLVVTW
Trigger: CCACGTCACAACCAGACTGCAATGTGGATAGTTGCT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTCTGAGATACAAAAGGTaGCATATCCACTGCTTACTG +
Preference number: 4 (lower is better)
Translates to: IWHRFRARAMINMVIGGFLRYKR*HIHCLL
Trigger: CAGTAAGCAGTGGATATGGCACCTTTTGTATCTCAG...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCCTGAGATACAAAAGGTaGCATATCCACTGCTTACTG +
Preference number: 4 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPLRYKR*HIHCLL
Trigger: CAGTAAGCAGTGGATATGGCACCTTTTGTATCTCAG...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp GTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCAAGTTGGGAACATCTATGTaGTCCATGAACTCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: VMRTEPSSRLILSKRSSKLGTSM*SMNSLG
Trigger: CCCTAAGGAGTTCATGGAGCACATAGATGTTCCCAA...CTTGGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTTCAGGCAAAGAGTGGTaGATATCCTTTTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: IWHRFRARAMINMVIGGFSGKEW*ISFSSS
Trigger: ACTAGAGGAAAAGGATATGCACCACTCTTTGCCTGA...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTATAAGCTCGAAGATCTaGTATGTGTCGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSAISSKI*YVSSML
Trigger: AAGCATGCTCGACACATAGCAGATCTTCGAGCTTAT...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp GAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCCATAAGCTCGAAGATCTaGTATGTGTCGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: EALLAALKRSLKSFTSISISSKI*YVSSML
Trigger: AAGCATGCTCGACACATAGCAGATCTTCGAGCTTAT...GGAAATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
CDS-3UTR GCA 90 bp TTGGAGTACTTGATTTACGATTTGAAGGTGGTAAAGATGATGATCTCTGTGAGGGGAAGCACTGCTGGCTaGACTGAAGCGTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LEYLIYDLKVVKMMISVRGSTAG*TEAFSQ
Trigger: TTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCC...CCTCACAGAGATCATCATCTTTACCACCTTCAAATCGTAAATCAAGTACTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTTCTTCAATTCGTTCCTaGAAAATTTTGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: PPGEGILLSAASIWSFSFSSIRS*KILEAL
Trigger: CAGTGCTTCCAAAATTTTGCAGGAACGAATTGAAGA...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp GCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTAAAGATGGAATACTCTaGACCTGGAATCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: AEVRKTWNFFSVMRTEPSKDGIL*TWNQPF
Trigger: AAATGGCTGATTCCAGGTGCAGAGTATTCCATCTTT...ACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp TTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCCACCAAAGATGGAATACTCTaGACCTGGAATCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: LWNCSCWATICSWHCFSTKDGIL*TWNQPF
Trigger: AAATGGCTGATTCCAGGTGCAGAGTATTCCATCTTT...GGTGGAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp GTGCTGAGGATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATAAAGATGGAATACTCTaGACCTGGAATCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: VLRIQEKPETGKQRAQIDKDGIL*TWNQPF
Trigger: AAATGGCTGATTCCAGGTGCAGAGTATTCCATCTTT...ATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTATCCTCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR GCA 90 bp AGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCATTTCTTTAGCGTCATaGGAACTGAACCCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RCAKHGISLASCELNPVLISLAS*ELNPVL
Trigger: GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAAT...GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATTGTGGAACTGCTCCTaGTGGGCAACTATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLWNCS*WATICS
Trigger: AGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR GCA 90 bp GTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGGAAGAAACTGGAGTTaGTTTCTTGGATTGGTACGT +
Preference number: 4 (lower is better)
Translates to: VEFGCGTAPAGQLSVLGIGRNWS*FLGLVR
Trigger: ACGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCC...AATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGAATATGTGGGGCACTaGGTTCTGATTGGCTACCAA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKEYVGH*VLIGYQ
Trigger: TTGGTAGCCAATCAGAACGCAGTGCCCCACATATTC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTGTAACCATTTTATCTaGTTGCTAATGGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: KVIRPPGEGILLSAASIWCNHFI*LLMERS
Trigger: ACTCCTTTCCATTAGCAAGCAGATAAAATGGTTACA...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR GCA 90 bp CTCCTGTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTTTCCTTCAGATTCTaGCTAATCCCTCAGAACTCG +
Preference number: 4 (lower is better)
Translates to: LLYMLNLVVELLLLGNYLFSFRF*LIPQNS
Trigger: CGAGTTCTGAGGGATTAGGCAGAATCTGAAGGAAAA...CAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATTCACCAGGAGAAATaGATACATCTTCCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRIHQEK*IHLPLK
Trigger: CTTTAAAGGAAGATGTATCCATTTCTCCTGGTGAAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATCAGATTTCTCAATTaGTGTCTTCTTACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRIRFLN*CLLTLL
Trigger: GAGCAAAGTAAGAAGACACCAATTGAGAAATCTGAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATTTGGAGTTTCATCTaGTTTACTGAGGTAAAAAGC +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRIWSFI*FTEVKS
Trigger: GCTTTTTACCTCAGTAAACCAGATGAAACTCCAAAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCGTTTCAGGCAAAGAGTaGTGCATATCCTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPVSGKE*CISFSS
Trigger: AGAGGAAAAGGATATGCACCACTCTTTGCCTGAAAC...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTTCTAGAGTCAGGACCTaGTTTGGTGACACATCTGTG +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSSRVRT*FGDTSV
Trigger: CACAGATGTGTCACCAAACCAGGTCCTGACTCTAGA...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CCA 90 bp ACGCGACTAGTAGCTTCATGCAAAGCACTATCTAATTGGCCACATCTGTCTACAACGGAAACGTGGAACTaGTCCTACTTTCGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TRLVASCKALSNWPHLSTTETWN*SYFRFG
Trigger: TCCAAAACGAAAGTAGGACCAGTTCCACGTTTCCGT...TGTAGACAGATGTGGCCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606326.1
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGTTCCTGCAAAATTTTaGAAGCACTGCTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKVPAKF*KHCWLH
Trigger: GTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAAC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCACAGGTTTCCTCCAGCTaGTTATCCACGTTACTGTCC +
Preference number: 4 (lower is better)
Translates to: IYSSPRLFSQILSSLHLAQVSSS*LSTLLS
Trigger: GGACAGTAACGTGGATAACCAGCTGGAGGAAACCTG...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp AGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCTTGGGCACACTTTTCTaGAGAACGACTTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: RCAKHGISLASCELNPVLLGTLF*RTTCIN
Trigger: GTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAA...GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CCA 90 bp CTGCTTACTGAGCAACTATCCACATTGCAGTCTGGTTGTGACGTGGACATTTCTTTGGGCACACTTTTCTaGAGAACGACTTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: LLTEQLSTLQSGCDVDISLGTLF*RTTCIN
Trigger: GTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAA...AGAAATGTCCACGTCACAACCAGACTGCAATGTGGATAGTTGCTCAGTAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCCTCTTTTGTCTCTGTTaGGCACACTTTTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPLFCLC*AHFSGE
Trigger: TTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAG...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CCA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTCTCTTTTGTCTCTGTTaGGCACACTTTTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: IWHRFRARAMINMVIGGFLFCLC*AHFSGE
Trigger: TTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAG...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp ACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTCAGAGCTCTTTTGTCTCTGTTaGGCACACTTTTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TRETRNRQAAGTNRFDSELFCLC*AHFSGE
Trigger: TTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAG...CTCTGAGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CCA 90 bp CAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTTTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: QRFAEVRKTWNFFSVMRTFLHSI*HRFRAR
Trigger: TCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA...AGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTTTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSFLHSI*HRFRAR
Trigger: TCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATTTCTTCACTCCATTTaGCACCGGTTCAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKFLHSI*HRFRAR
Trigger: TCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp AATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTGAGGTGCGCAAAACATaGAATTTCTTTAGCGTCATG +
Preference number: 4 (lower is better)
Translates to: NSFLQNFGSTAGCTEAFSEVRKT*NFFSVM
Trigger: CATGACGCTAAAGAAATTCCATGTTTTGCGCACCTC...AGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp TGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCCTACTGGCATTTTCAGTaGCTAACATTCAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: WLWNCSCWATICSWHCFSYWHFQ*LTFRTV
Trigger: CACAGTTCTGAATGTTAGCCACTGAAAATGCCAGTA...GGAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR CCA 90 bp ATTGTTCACGTTCACTCGGCAGAATGTGGACAACTTTACCTCTGGTGGATGATTGAATTACAGATGGTCTaGTCTTCCCTGAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: IVHVHSAECGQLYLWWMIELQMV*SSLRKR
Trigger: CCTCTTTCTCAGGGAAGACCAGACCATCTGTAATTC...AATCATCCACCAGAGGTAAAGTTGTCCACATTCTGCCGAGTGAACGTGAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACTCTGGTGGATGATTTaGGTTGGAAGCAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLWWMI*VGSRSE
Trigger: CTCACTTCTGCTTCCAACCCAAATCATCCACCAGAG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATAACTGGGATGGCTTaGTTCATTCTAACTACTTAT +
Preference number: 4 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRITGMA*FILTTY
Trigger: ATAAGTAGTTAGAATGAACCAAGCCATCCCAGTTAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
3UTR CAA 72 bp CTTGTTCTCATTTCTTCAATTCGTTCCTGCAAAATTTaGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LVLISSIRSCKI*EALLAALKRSL
Trigger: GAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATTGAAGAAATGAGAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
CDS-3UTR TCA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCTCCTTGTTTAGATCTTaGACCTCCATCTTCTACATG +
Preference number: 4 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPSLFRS*TSIFYM
Trigger: CATGTAGAAGATGGAGGTTCAAGATCTAAACAAGGA...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTCAGGTAACTGAGAAGTaGCATTACTTGCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSAQVTEK*HYLLVK
Trigger: TTTCACAAGCAAGTAATGTCACTTCTCAGTTACCTG...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR TCA 90 bp TTTCTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTAGTAATGGTATATACTaGCGGAAACGTGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: FLHSIWHRFRARAMINMVSNGIY*RKRGTG
Trigger: ACCAGTTCCACGTTTCCGTCAGTATATACCATTACT...AACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR TCA 90 bp ATTGTTCACGTTCACTCGGCAGAATGTGGACAACTTTACCTCTGGTGGATGATTCATGTTCTACTTGCTTaGCCTGAGCTTCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: IVHVHSAECGQLYLWWMIHVLLA*PELQVL
Trigger: CAAAACTTGAAGCTCAGGTCAAGCAAGTAGAACATG...AATCATCCACCAGAGGTAAAGTTGTCCACATTCTGCCGAGTGAACGTGAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp GTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGATCTTCCAAGCCGAGGATTTATATTTaGGGTGTCCTCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: VMRTEPSSRLILSKRSSKPRIYI*GVLFLC
Trigger: ACAGAGAAAGAGGACACCTCAAATATAAATCCTCGG...CTTGGAAGATCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAACGACTTGCATTAACTaGAGTTTCAGTTTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKTTCIN*SFSLPR
Trigger: CCTCGGCAAACTGAAACTTCAGTTAATGCAAGTCGT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp CAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTTCAGGGCAAGAGCTATaGTTAACATGGTTATCGGTG +
Preference number: 4 (lower is better)
Translates to: QRFAEVRKTWNFFSVMRTSGQEL*LTWLSV
Trigger: CACCGATAACCATGTTAATCATAGCTCTTGCCCTGA...AGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp TGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCCTGTTCGTAGCTAACTaGTTTATTCTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: WNFFSVMRTEPSSRLILSLFVAN*FILLPG
Trigger: GCCTGGGAGAAGAATAAATCAGTTAGCTACGAACAG...GGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACTGTTCGTAGCTAACTaGTTTATTCTTCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLFVAN*FILLPG
Trigger: GCCTGGGAGAAGAATAAATCAGTTAGCTACGAACAG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSILSVK*FVLQEK
Trigger: CTTCTCCTGGAGGACGAATCACTTTACAGACAAGAT...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp TTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTACTTCAACTGTACCTTaGATTACAGATGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LEALLAALKRSLKSFTSITSTVP*ITDGLV
Trigger: GACCAGACCATCTGTAATTCAAGGTACAGTTGAAGT...AATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATGCTCAAAGGTCATTTaGGAGCCTGCTTGGAATAAC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKCSKVI*EPAWNN
Trigger: GTTATTCCAAGCAGGCTCTCAAATGACCTTTGAGCA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGCCTGGCCAATATGGTaGAACACCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKAWPIW*NTISTK
Trigger: TTTAGTAGAGATGGTGTTTCACCATATTGGCCAGGC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGCGCAGAAGATGTTTTaGTGGAGGTTAACGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKAQKMF*WRLTPF
Trigger: AAAAGGCGTTAACCTCCATCAAAACATCTTCTGCGC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATATCAAAGCATATGCTaGGAGAGAGGCGCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKYQSIC*ERGAED
Trigger: ATCTTCTGCGCCTCTCTCTCAGCATATGCTTTGATA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGGTGCCATATCCACTaGTTACTGAGCAACTATCCA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKRCHIH*LLSNYP
Trigger: TGGATAGTTGCTCAGTAAGCAGTGGATATGGCACCT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATTGGGAACATCTATGTaGTCCATGAACTCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLGTSM*SMNSLG
Trigger: CCCTAAGGAGTTCATGGAGCACATAGATGTTCCCAA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTCGACTAGTAGCTTCATaGAAAGCACTATCTAATTGG +
Preference number: 4 (lower is better)
Translates to: IWHRFRARAMINMVIGGFRLVAS*KALSNW
Trigger: CCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCG...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp AATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCGACTAGTAGCTTCATaGAAAGCACTATCTAATTGG +
Preference number: 4 (lower is better)
Translates to: NSFLQNFGSTAGCTEAFSRLVAS*KALSNW
Trigger: CCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCG...AGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
CDS-3UTR GCA 90 bp TTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCGGAAGCACTGCTGGCTaGACTGAAGCGTTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: FNGYKSQRFAEVRKTWNFGSTAG*TEAFSQ
Trigger: TTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCC...GAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTAAAGATGGAATACTCTaGACCTGGAATCAGCCATTT +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSAKDGIL*TWNQPF
Trigger: AAATGGCTGATTCCAGGTGCAGAGTATTCCATCTTT...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp CTAGGTGCTGAGGATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATACTGAAGTTTCAGTTTaGCGAGGATTTATATTTGAG +
Preference number: 4 (lower is better)
Translates to: LGAEDTRETRNRQAAGTNTEVSV*RGFIFE
Trigger: CTCAAATATAAATCCTCGGCAAACTGAAACTTCAGT...ATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTATCCTCAGCACCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR GCA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCCAAATCTCAAAGATTTaGAGAGGTGCGCAAAACATG +
Preference number: 4 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPQISKI*RGAQNM
Trigger: CATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTG...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTTACATGTGCTCTCTTTaGTTGGTTCTGCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: IWHRFRARAMINMVIGGFYMCSL*LVLLQF
Trigger: AAACTGAAGCAGAACCAACCAAAGAGAGCACATGTA...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAACGGAAACGTGGAACTaGTCCTACTTTCGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKTETWN*SYFRFG
Trigger: TCCAAAACGAAAGTAGGACCAGTTCCACGTTTCCGT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGAATACTGACGGAAACGTaGAACTGGTCCTACTTTCGT +
Preference number: 4 (lower is better)
Translates to: FFSVMRTEPSSRLILSKRILTET*NWSYFR
Trigger: ACGAAAGTAGGACCAGTTCCACGTTTCCGTCAGTAT...TCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAATACTGACGGAAACGTaGAACTGGTCCTACTTTCGT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKILTET*NWSYFR
Trigger: ACGAAAGTAGGACCAGTTCCACGTTTCCGTCAGTAT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp AGGATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTTTGGGCACACTTTTCTaGAGAACGACTTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: RIQEKPETGKQRAQIDLTLGTLF*RTTCIN
Trigger: GTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAA...AGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CCA 90 bp CTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCAGTGCTGCCTCAATCTaGTCCTTTTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: LHSIWHRFRARAMINMVISAASI*SFSFVS
Trigger: ACTTACAAAAGAAAAGGACCAGATTGAGGCAGCACT...GATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp TTTCTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTGAGGTGCGCAAAACATaGAATTTCTTTAGCGTCATG +
Preference number: 4 (lower is better)
Translates to: FLHSIWHRFRARAMINMVEVRKT*NFFSVM
Trigger: CATGACGCTAAAGAAATTCCATGTTTTGCGCACCTC...AACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGAATTACAGATGGTCTaGTCTTCCCTGAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKELQMV*SSLRKR
Trigger: CCTCTTTCTCAGGGAAGACCAGACCATCTGTAATTC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACCTGCTTGGAATAACTaGGATGGCTTGGTTCATTCT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKPAWNN*DGLVHS
Trigger: AGAATGAACCAAGCCATCCCAGTTATTCCAAGCAGG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp CTGACTGGCATCAAGCCTCTAAAGCAGATTCAAGCTAAGACATTTCACCTGATTAACTGGAACACTGACTaGCATCAAGCCTCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: LTGIKPLKQIQAKTFHLINWNTD*HQASKA
Trigger: TGCTTTAGAGGCTTGATGCCAGTCAGTGTTCCAGTT...AATCAGGTGAAATGTCTTAGCTTGAATCTGCTTTAGAGGCTTGATGCCAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR CCA 90 bp CTGACTGGCATCAAGCCTCTAAAGCAGATTCAAGCTAAGACATTTCACCTGATTCCCCTCTTAGATAACTaGAACACTGACTGGCATCAA +
Preference number: 4 (lower is better)
Translates to: LTGIKPLKQIQAKTFHLIPLLDN*NTDWHQ
Trigger: TTGATGCCAGTCAGTGTTCCAGTTATCTAAGAGGGG...AATCAGGTGAAATGTCTTAGCTTGAATCTGCTTTAGAGGCTTGATGCCAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR CCA 90 bp ATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTACCTTGAATTACAGATaGTCTGGTCTTCCCTATCAG +
Preference number: 4 (lower is better)
Translates to: IWLWNCSCWATICSWHCFTLNYR*SGLPYQ
Trigger: CTGATAGGGAAGACCAGACCATCTGTAATTCAAGGT...AAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535049.5
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATCCTTTAAAGACACATaGCACTCTTCAGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSFKDT*HSSGVC
Trigger: ACAGACTCCTGAAGAGTGTCATGTGTCTTTAAAGGA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAGTCAATCCTGTTCCTaGATCAGACATCCAAGCATT +
Preference number: 4 (lower is better)
Translates to: WNFFSVMRTEPSSRLILSSQSCS*IRHPSI
Trigger: AATGCTTGGATGTCTGATTCAGGAACAGGATTGACT...GGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp CTCTTTTGTCTCTGTTGGGCACACTTTTCTGGAGAACGACTTGCATTAACTGAAAGTCAATCCTGTTCCTaGATCAGACATCCAAGCATT +
Preference number: 4 (lower is better)
Translates to: LFCLCWAHFSGERLALTESQSCS*IRHPSI
Trigger: AATGCTTGGATGTCTGATTCAGGAACAGGATTGACT...TTCAGTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp TTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCCAGGACCTGGTTTGGTaGCACATCTGTGGAAGACAA +
Preference number: 4 (lower is better)
Translates to: FNGYKSQRFAEVRKTWNFQDLVW*HICGRQ
Trigger: TTGTCTTCCACAGATGTGTCACCAAACCAGGTCCTG...GAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGGAAATCCAGGTAACTaGGAAGTGACATTACTTGCT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKGNPGN*EVTLLA
Trigger: AGCAAGTAATGTCACTTCTCAGTTACCTGGATTTCC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGTAATGGTATATACTaGCGGAAACGTGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSNGIY*RKRGTG
Trigger: ACCAGTTCCACGTTTCCGTCAGTATATACCATTACT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp CTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAATTCCAAGGAAGTCAATaGAATGCATTCTGGGACACT +
Preference number: 4 (lower is better)
Translates to: LKDLQRCAKHGISLASCEFQGSQ*NAFWDT
Trigger: AGTGTCCCAGAATGCATTTCATTGACTTCCTTGGAA...TTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATTCCAAGGAAGTCAATaGAATGCATTCTGGGACACT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKFQGSQ*NAFWDT
Trigger: AGTGTCCCAGAATGCATTTCATTGACTTCCTTGGAA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTCACTGCTGGCTGCACTaGAGCGTTCTCTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: LMATNLKDLQRCAKHGISHCWLH*SVLSNH
Trigger: ATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTG...AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp AGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACATGTTCTACTTGCTTaGCCTGAGCTTCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: RFAEVRKTWNFFSVMRTEHVLLA*PELQVL
Trigger: CAAAACTTGAAGCTCAGGTCAAGCAAGTAGAACATG...TTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACCGAGGATTTATATTTaGGGTGTCCTCTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKPRIYI*GVLFLC
Trigger: ACAGAGAAAGAGGACACCTCAAATATAAATCCTCGG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTACGACTTGCATTAACTaGAGTTTCAGTTTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILTTCIN*SFSLPR
Trigger: CCTCGGCAAACTGAAACTTCAGTTAATGCAAGTCGT...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATTTTTGCTAAGCAGATaGCTAAATCCTGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKFLLSR*LNPGDK
Trigger: CTTGTCCCCAGGATTTAGTCATCTGCTTAGCAAAAA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILILSVK*FVLQEK
Trigger: CTTCTCCTGGAGGACGAATCACTTTACAGACAAGAT...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR TCA 90 bp GTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGTTTTTCCACCAAATTaGATAGCTGTAACCACCTGG +
Preference number: 4 (lower is better)
Translates to: VYVEFGCGTAPAGQLSVLVFPPN*IAVTTW
Trigger: CCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAAC...AAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR TCA 90 bp TTTTTATCTCCTCCTGTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGTCCTCCTGTATATGTTaGATTTGGTTGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: FLSPPVYVEFGCGTAPAGSSCIC*IWLWNC
Trigger: GCAGTTCCACAACCAAATTCAACATATACAGGAGGA...CCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAGGAGATAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATCCTCCTGTATATGTTaGATTTGGTTGTGGAACTGC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSSCIC*IWLWNC
Trigger: GCAGTTCCACAACCAAATTCAACATATACAGGAGGA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAACTTCAACTGTACCTTaGATTACAGATGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKTSTVP*ITDGLV
Trigger: GACCAGACCATCTGTAATTCAAGGTACAGTTGAAGT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp CAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGACGTGGACATTTCTTaGTGTATTTCAGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: QRFAEVRKTWNFFSVMRTDVDIS*CISGSV
Trigger: CACAGAACCTGAAATACAGCAAGAAATGTCCACGTC...AGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGACGTGGACATTTCTTaGTGTATTTCAGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKDVDIS*CISGSV
Trigger: CACAGAACCTGAAATACAGCAAGAAATGTCCACGTC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCAAGGTGCCATATCCACTaGTTACTGAGCAACTATCCA +
Preference number: 4 (lower is better)
Translates to: IYSSPRLFSQILSSLHLARCHIH*LLSNYP
Trigger: TGGATAGTTGCTCAGTAAGCAGTGGATATGGCACCT...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACTGAGATACAAAAGGTaGCATATCCACTGCTTACTG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLRYKR*HIHCLL
Trigger: CAGTAAGCAGTGGATATGGCACCTTTTGTATCTCAG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATCAGGCAAAGAGTGGTaGATATCCTTTTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSGKEW*ISFSSS
Trigger: ACTAGAGGAAAAGGATATGCACCACTCTTTGCCTGA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAATAAGCTCGAAGATCTaGTATGTGTCGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKISSKI*YVSSML
Trigger: AAGCATGCTCGACACATAGCAGATCTTCGAGCTTAT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp CTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCTCTTCAATTCGTTCCTaGAAAATTTTGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: LHSIWHRFRARAMINMVISSIRS*KILEAL
Trigger: CAGTGCTTCCAAAATTTTGCAGGAACGAATTGAAGA...GATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp AGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCCAGTCTTCAATTCGTTCCTaGAAAATTTTGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: STAGCTEAFSQIIHFNFQSSIRS*KILEAL
Trigger: CAGTGCTTCCAAAATTTTGCAGGAACGAATTGAAGA...CTGGAAATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAATTTCTTTAGCGTCATaGGAACTGAACCCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKISLAS*ELNPVL
Trigger: GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAAT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTAAAGATTTGCAGAGGTaGGCAAAACATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSAKDLQR*AKHGIS
Trigger: AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTT...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR GCA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCGTACTTAGCAGTTGCTaGTATCGAATTCTTAAACCA +
Preference number: 4 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPVLSSC*YRILKP
Trigger: TGGTTTAAGAATTCGATAGCAGCAACTGCTAAGTAC...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp CTCCTGTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGCTGGTACTTAGCAGTTaGTGCTATCGAATTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LLYMLNLVVELLLLGNYLLVLSS*CYRILK
Trigger: TTTAAGAATTCGATAGCAGCAACTGCTAAGTACCAG...CAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp TTTCTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTTACATGTGCTCTCTTTaGTTGGTTCTGCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FLHSIWHRFRARAMINMVYMCSL*LVLLQF
Trigger: AAACTGAAGCAGAACCAACCAAAGAGAGCACATGTA...AACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGTTTCAGGCAAAGAGTaGTGCATATCCTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKVSGKE*CISFSS
Trigger: AGAGGAAAAGGATATGCACCACTCTTTGCCTGAAAC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCAACGGAAACGTGGAACTaGTCCTACTTTCGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: IYSSPRLFSQILSSLHLATETWN*SYFRFG
Trigger: TCCAAAACGAAAGTAGGACCAGTTCCACGTTTCCGT...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATTGGGCACACTTTTCTaGAGAACGACTTGCATTAAC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLGTLF*RTTCIN
Trigger: GTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACTCTTTTGTCTCTGTTaGGCACACTTTTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLFCLC*AHFSGE
Trigger: TTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp CGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTACTCTTTTGTCTCTGTTaGGCACACTTTTCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RKTWNFFSVMRTEPSSRLLFCLC*AHFSGE
Trigger: TTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAG...TAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CCA 90 bp TGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCGAGGTGCGCAAAACATaGAATTTCTTTAGCGTCATG +
Preference number: 4 (lower is better)
Translates to: WNFFSVMRTEPSSRLILSEVRKT*NFFSVM
Trigger: CATGACGCTAAAGAAATTCCATGTTTTGCGCACCTC...GGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGAGGTGCGCAAAACATaGAATTTCTTTAGCGTCATG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKEVRKT*NFFSVM
Trigger: CATGACGCTAAAGAAATTCCATGTTTTGCGCACCTC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp AAAGTTAGAGTCAGGAAGCATTGTTCACGTTCACTCGGCAGAATGTGGACAACTTACTGGCATTTTCAGTaGCTAACATTCAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: KVRVRKHCSRSLGRMWTTYWHFQ*LTFRTV
Trigger: CACAGTTCTGAATGTTAGCCACTGAAAATGCCAGTA...AGTTGTCCACATTCTGCCGAGTGAACGTGAACAATGCTTCCTGACTCTAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp GTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCTTCATCATCTACTaGCATTTTCAGTGGCTAACA +
Preference number: 4 (lower is better)
Translates to: VYVEFGCGTAPAGQLSVLGFIIY*HFQWLT
Trigger: TGTTAGCCACTGAAAATGCCAGTAGATGATGAAGCC...AAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR CCA 90 bp AGACATCCAAGCATTTGGAGTTTCATCTGGTTTACTGAGGTAAAAAGCACGAGGGGCTTCATCATCTACTaGCATTTTCAGTGGCTAACA +
Preference number: 4 (lower is better)
Translates to: RHPSIWSFIWFTEVKSTRGFIIY*HFQWLT
Trigger: TGTTAGCCACTGAAAATGCCAGTAGATGATGAAGCC...CCTCGTGCTTTTTACCTCAGTAAACCAGATGAAACTCCAAATGCTTGGATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGGCTTCATCATCTACTaGCATTTTCAGTGGCTAACA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKGFIIY*HFQWLT
Trigger: TGTTAGCCACTGAAAATGCCAGTAGATGATGAAGCC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR CCA 90 bp AATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTATAGCTGTAACCACCTaGTCTCACAGTTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: NLVVELLLLGNYLFLALFIAVTT*SHSFSK
Trigger: TTTGGAAAAACTGTGAGACCAGGTGGTTACAGCTAT...AAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535049.5
CDS-3UTR TCA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCTTTAAAGACACATaGCACTCTTCAGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILSFKDT*HSSGVC
Trigger: ACAGACTCCTGAAGAGTGTCATGTGTCTTTAAAGGA...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTTCCTTGTTTAGATCTTaGACCTCCATCTTCTACATG +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSSLFRS*TSIFYM
Trigger: CATGTAGAAGATGGAGGTTCAAGATCTAAACAAGGA...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATCCTTGTTTAGATCTTaGACCTCCATCTTCTACATG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSLFRS*TSIFYM
Trigger: CATGTAGAAGATGGAGGTTCAAGATCTAAACAAGGA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCTCCTTGTTTAGATCTTaGACCTCCATCTTCTACATG +
Preference number: 4 (lower is better)
Translates to: WNFFSVMRTEPSSRLILSSLFRS*TSIFYM
Trigger: CATGTAGAAGATGGAGGTTCAAGATCTAAACAAGGA...GGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR TCA 90 bp AATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTGTGAGGTTGAATCCCTaGAATCTGCTGCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: NGYKSQRFAEVRKTWNFFVRLNP*NLLLWL
Trigger: AAGCCAAAGCAGCAGATTTCAGGGATTCAACCTCAC...AAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR TCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACAGGTAACTGAGAAGTaGCATTACTTGCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKQVTEK*HYLLVK
Trigger: TTTCACAAGCAAGTAATGTCACTTCTCAGTTACCTG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTGGAAATCCAGGTAACTaGGAAGTGACATTACTTGCT +
Preference number: 4 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILGNPGN*EVTLLA
Trigger: AGCAAGTAATGTCACTTCTCAGTTACCTGGATTTCC...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR TCA 90 bp TTCTTATTTTCAAGTGTTCTCACGCGACTAGTAGCTTCATGCAAAGCACTATCTAGGCCGAAGCAACCATaGCAGTGTTTTCTTCATCTA +
Preference number: 4 (lower is better)
Translates to: FLFSSVLTRLVASCKALSRPKQP*QCFLHL
Trigger: TAGATGAAGAAAACACTGTCATGGTTGCTTCGGCCT...AGATAGTGCTTTGCATGAAGCTACTAGTCGCGTGAGAACACTTGAAAATAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606326.1
CDS-3UTR TCA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCACATGTTCTACTTGCTTaGCCTGAGCTTCAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: IYSSPRLFSQILSSLHLAHVLLA*PELQVL
Trigger: CAAAACTTGAAGCTCAGGTCAAGCAAGTAGAACATG...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR TCA 90 bp AGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAATTGCTTGTTTTGAAGTaGGTAGGCTTTAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: RFAEVRKTWNFFSVMRTELLVLK*VGFRSP
Trigger: AGGAGATCTAAAGCCTACTCACTTCAAAACAAGCAA...TTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp TTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTAGCAACTATCCACATTaGAGTCTGGTTGTGACGTGG +
Preference number: 4 (lower is better)
Translates to: LMATNLKDLQRCAKHGISSNYPH*SLVVTW
Trigger: CCACGTCACAACCAGACTGCAATGTGGATAGTTGCT...AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCAATAAGCTCGAAGATCTaGTATGTGTCGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: IYSSPRLFSQILSSLHLAISSKI*YVSSML
Trigger: AAGCATGCTCGACACATAGCAGATCTTCGAGCTTAT...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp TTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTCTCAGAATAAGTATAAGCTCGAAGATCTaGTATGTGTCGAGCATGCTT +
Preference number: 4 (lower is better)
Translates to: FRARAMINMVIGGFLRISISSKI*YVSSML
Trigger: AAGCATGCTCGACACATAGCAGATCTTCGAGCTTAT...ACTTATTCTGAGAAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTATTTCTTTAGCGTCATaGGAACTGAACCCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILISLAS*ELNPVL
Trigger: GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAAT...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACAAATCTCAAAGATTTaGAGAGGTGCGCAAAACATG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKQISKI*RGAQNM
Trigger: CATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp CTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACAAATCTCAAAGATTTaGAGAGGTGCGCAAAACATG +
Preference number: 4 (lower is better)
Translates to: LKDLQRCAKHGISLASCEQISKI*RGAQNM
Trigger: CATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTG...TTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp TTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGAAGTCTGGTTGTGACGTaGACATTTCTTGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: FFSVMRTEPSSRLILSKRSLVVT*TFLAVF
Trigger: AAATACAGCAAGAAATGTCCACGTCACAACCAGACT...TCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGTCTGGTTGTGACGTaGACATTTCTTGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSLVVT*TFLAVF
Trigger: AAATACAGCAAGAAATGTCCACGTCACAACCAGACT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TTTTTATCTCCTCCTGTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGAGTCTGGTTGTGACGTaGACATTTCTTGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: FLSPPVYVEFGCGTAPAGSLVVT*TFLAVF
Trigger: AAATACAGCAAGAAATGTCCACGTCACAACCAGACT...CCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAGGAGATAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTATTCACCAGGAGAAATaGATACATCTTCCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: IWHRFRARAMINMVIGGFIHQEK*IHLPLK
Trigger: CTTTAAAGGAAGATGTATCCATTTCTCCTGGTGAAT...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATACATGTGCTCTCTTTaGTTGGTTCTGCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKYMCSL*LVLLQF
Trigger: AAACTGAAGCAGAACCAACCAAAGAGAGCACATGTA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp AGACATCCAAGCATTTGGAGTTTCATCTGGTTTACTGAGGTAAAAAGCACGAGGTACATGTGCTCTCTTTaGTTGGTTCTGCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: RHPSIWSFIWFTEVKSTRYMCSL*LVLLQF
Trigger: AAACTGAAGCAGAACCAACCAAAGAGAGCACATGTA...CCTCGTGCTTTTTACCTCAGTAAACCAGATGAAACTCCAAATGCTTGGATGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTATTTGGAGTTTCATCTaGTTTACTGAGGTAAAAAGC +
Preference number: 4 (lower is better)
Translates to: NLVCKVIRPPGEGILLSAIWSFI*FTEVKS
Trigger: GCTTTTTACCTCAGTAAACCAGATGAAACTCCAAAT...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp ACGCGACTAGTAGCTTCATGCAAAGCACTATCTAATTGGCCACATCTGTCTACAAGACATCCAAGCATTTaGAGTTTCATCTGGTTTACT +
Preference number: 4 (lower is better)
Translates to: TRLVASCKALSNWPHLSTRHPSI*SFIWFT
Trigger: AGTAAACCAGATGAAACTCCAAATGCTTGGATGTCT...TGTAGACAGATGTGGCCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGTGCTGCCTCAATCTaGTCCTTTTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSAASI*SFSFVS
Trigger: ACTTACAAAAGAAAAGGACCAGATTGAGGCAGCACT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTAGTGCTGCCTCAATCTaGTCCTTTTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSSAASI*SFSFVS
Trigger: ACTTACAAAAGAAAAGGACCAGATTGAGGCAGCACT...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACCATTTGTACTAAGGTaGGGACTACTTCTATCAGTA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKPFVLR*GLLLSV
Trigger: TACTGATAGAAGTAGTCCCCACCTTAGTACAAATGG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTCCATTTGTACTAAGGTaGGGACTACTTCTATCAGTA +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSPFVLR*GLLLSV
Trigger: TACTGATAGAAGTAGTCCCCACCTTAGTACAAATGG...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGAAAGAACTTTCCTTaGTATCCCTCTTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKRKNFP*YPSSQL
Trigger: TAGCTGTGAAGAGGGATACCAAGGAAAGTTCTTTCT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAATAGCTGTAACCACCTaGTCTCACAGTTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKIAVTT*SHSFSK
Trigger: TTTGGAAAAACTGTGAGACCAGGTGGTTACAGCTAT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR TCA 90 bp TTCTTATTTTCAAGTGTTCTCACGCGACTAGTAGCTTCATGCAAAGCACTATCTTCCTTTAAAGACACATaGCACTCTTCAGGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: FLFSSVLTRLVASCKALSSFKDT*HSSGVC
Trigger: ACAGACTCCTGAAGAGTGTCATGTGTCTTTAAAGGA...AGATAGTGCTTTGCATGAAGCTACTAGTCGCGTGAGAACACTTGAAAATAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp CTGACTGGCATCAAGCCTCTAAAGCAGATTCAAGCTAAGACATTTCACCTGATTAGCTTCTTTATCATCTaGGAGTTTGTAAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: LTGIKPLKQIQAKTFHLISFFII*EFVSIL
Trigger: GAGAATGCTTACAAACTCTCAGATGATAAAGAAGCT...AATCAGGTGAAATGTCTTAGCTTGAATCTGCTTTAGAGGCTTGATGCCAGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR TCA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCATCTACTTGCTTGACCTaGGCTTCAAGTTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: IYSSPRLFSQILSSLHLASTCLT*ASSFEI
Trigger: GATTTCAAAACTTGAAGCTCAGGTCAAGCAAGTAGA...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTCGACTAGTAGCTTCATaGAAAGCACTATCTAATTGG +
Preference number: 4 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILRLVAS*KALSNW
Trigger: CCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCG...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATCTTCAATTCGTTCCTaGAAAATTTTGGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSSIRS*KILEAL
Trigger: CAGTGCTTCCAAAATTTTGCAGGAACGAATTGAAGA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp TTTCTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTACTGAAGTTTCAGTTTaGCGAGGATTTATATTTGAG +
Preference number: 4 (lower is better)
Translates to: FLHSIWHRFRARAMINMVTEVSV*RGFIFE
Trigger: CTCAAATATAAATCCTCGGCAAACTGAAACTTCAGT...AACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR GCA 90 bp ATTCATAATAAGCTCGAAGATCTGCTATGTGTCGAGCATGCTTTTCCTTCAGATATTTCTTTAGCGTCATaGGAACTGAACCCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: IHNKLEDLLCVEHAFPSDISLAS*ELNPVL
Trigger: GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAAT...ATCTGAAGGAAAAGCATGCTCGACACATAGCAGATCTTCGAGCTTATTATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp CGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAAAAGATTTGCAGAGGTaGGCAAAACATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: RKTWNFFSVMRTEPSSRLKDLQR*AKHGIS
Trigger: AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTT...TAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR GCA 90 bp CTCTTTTGTCTCTGTTGGGCACACTTTTCTGGAGAACGACTTGCATTAACTGAAAAAGATTTGCAGAGGTaGGCAAAACATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: LFCLCWAHFSGERLALTEKDLQR*AKHGIS
Trigger: AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTT...TTCAGTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAAAGATTTGCAGAGGTaGGCAAAACATGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKKDLQR*AKHGIS
Trigger: AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp CTGACTGGCATCAAGCCTCTAAAGCAGATTCAAGCTAAGACATTTCACCTGATTGCTAAAAGTTTTGACTaGTGCTTCAGTGTGTCTAAT +
Preference number: 4 (lower is better)
Translates to: LTGIKPLKQIQAKTFHLIAKSFD*CFSVSN
Trigger: ATTAGACACACTGAAGCAGCAGTCAAAACTTTTAGC...AATCAGGTGAAATGTCTTAGCTTGAATCTGCTTTAGAGGCTTGATGCCAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR CCA 90 bp AATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTATTTGGAGTTTCATCTaGTTTACTGAGGTAAAAAGC +
Preference number: 4 (lower is better)
Translates to: NLVVELLLLGNYLFLALFIWSFI*FTEVKS
Trigger: GCTTTTTACCTCAGTAAACCAGATGAAACTCCAAAT...AAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGACATCCAAGCATTTaGAGTTTCATCTGGTTTACT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKRHPSI*SFIWFT
Trigger: AGTAAACCAGATGAAACTCCAAATGCTTGGATGTCT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TTGAATAGCTGTAACCACCTGGTACTTAGCAGTTGCTGCTATCGAATTCTTAAAGTTTCAGGCAAAGAGTaGTGCATATCCTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LNSCNHLVLSSCCYRILKVSGKE*CISFSS
Trigger: AGAGGAAAAGGATATGCACCACTCTTTGCCTGAAAC...TTTAAGAATTCGATAGCAGCAACTGCTAAGTACCAGGTGGTTACAGCTATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCAAGTGCTGCCTCAATCTaGTCCTTTTCTTTTGTAAGT +
Preference number: 4 (lower is better)
Translates to: IYSSPRLFSQILSSLHLASAASI*SFSFVS
Trigger: ACTTACAAAAGAAAAGGACCAGATTGAGGCAGCACT...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp TTTTTATCTCCTCCTGTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGGCAACTATCTGTTCTTaGCATTGTTTTTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: FLSPPVYVEFGCGTAPAGATICS*HCFSTK
Trigger: TTTGGTGGAAAAACAATGCCAAGAACAGATAGTTGC...CCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAGGAGATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
3UTR CAA 72 bp TCATCTAGAGGAAGAAACTGGAGTTGCTTTCTTGGATaGGTACGTTGTAATGTAGACACAGGAACAGTATCT +
Preference number: 4 (lower is better)
Translates to: SSRGRNWSCFLG*VRCNVDTGTVS
Trigger: AGATACTGTTCCTGTGTCTACATTACAACGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCCTCTAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR TCA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTAGCTTCTTTATCATCTaGGAGTTTGTAAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILSFFII*EFVSIL
Trigger: GAGAATGCTTACAAACTCTCAGATGATAAAGAAGCT...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp AATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTTCAGGCAAAGAGTGGTaGATATCCTTTTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: NGYKSQRFAEVRKTWNFFSGKEW*ISFSSS
Trigger: ACTAGAGGAAAAGGATATGCACCACTCTTTGCCTGA...AAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp CTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAAACTGAAGTTTCAGTTTaGCGAGGATTTATATTTGAG +
Preference number: 4 (lower is better)
Translates to: LKDLQRCAKHGISLASCETEVSV*RGFIFE
Trigger: CTCAAATATAAATCCTCGGCAAACTGAAACTTCAGT...TTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAACTGAAGTTTCAGTTTaGCGAGGATTTATATTTGAG +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKTEVSV*RGFIFE
Trigger: CTCAAATATAAATCCTCGGCAAACTGAAACTTCAGT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR GCA 90 bp CTCTTTTGTCTCTGTTGGGCACACTTTTCTGGAGAACGACTTGCATTAACTGAAACTGAAGTTTCAGTTTaGCGAGGATTTATATTTGAG +
Preference number: 4 (lower is better)
Translates to: LFCLCWAHFSGERLALTETEVSV*RGFIFE
Trigger: CTCAAATATAAATCCTCGGCAAACTGAAACTTCAGT...TTCAGTTAATGCAAGTCGTTCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp TTCTTATTTTCAAGTGTTCTCACGCGACTAGTAGCTTCATGCAAAGCACTATCTCAAATCTCAAAGATTTaGAGAGGTGCGCAAAACATG +
Preference number: 4 (lower is better)
Translates to: FLFSSVLTRLVASCKALSQISKI*RGAQNM
Trigger: CATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTG...AGATAGTGCTTTGCATGAAGCTACTAGTCGCGTGAGAACACTTGAAAATAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR GCA 90 bp TTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTGGAAGAAACTGGAGTTaGTTTCTTGGATTGGTACGT +
Preference number: 4 (lower is better)
Translates to: LMATNLKDLQRCAKHGISGRNWS*FLGLVR
Trigger: ACGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCC...AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CCA 90 bp CAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTATCAGATTTCTCAATTaGTGTCTTCTTACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: QRFAEVRKTWNFFSVMRTIRFLN*CLLTLL
Trigger: GAGCAAAGTAAGAAGACACCAATTGAGAAATCTGAT...AGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR CCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTATCAGATTTCTCAATTaGTGTCTTCTTACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSIRFLN*CLLTLL
Trigger: GAGCAAAGTAAGAAGACACCAATTGAGAAATCTGAT...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAATCAGATTTCTCAATTaGTGTCTTCTTACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKIRFLN*CLLTLL
Trigger: GAGCAAAGTAAGAAGACACCAATTGAGAAATCTGAT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTATTTGGAGTTTCATCTaGTTTACTGAGGTAAAAAGC +
Preference number: 4 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSIWSFI*FTEVKS
Trigger: GCTTTTTACCTCAGTAAACCAGATGAAACTCCAAAT...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CCA 90 bp AGTAAGTTATTCTTATTTTCAAGTGTTCTCACGCGACTAGTAGCTTCATGCAAATTTAGGGGATCGCTTTaGACTATAAGCCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SKLFLFSSVLTRLVASCKFRGSL*TISHSH
Trigger: GTGACTGTGGCTTATAGTCCAAAGCGATCCCCTAAA...TTTGCATGAAGCTACTAGTCGCGTGAGAACACTTGAAAATAAGAATAACTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAATAACTGGGATGGCTTaGTTCATTCTAACTACTTAT +
Preference number: 4 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKITGMA*FILTTY
Trigger: ATAAGTAGTTAGAATGAACCAAGCCATCCCAGTTAT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CCA 90 bp AATAGCTGTAACCACCTGGTCTCACAGTTTTTCCAAAGTTCCGAATCAGTCTTTGAATTACAGATGGTCTaGTCTTCCCTATCAGTATTT +
Preference number: 4 (lower is better)
Translates to: NSCNHLVSQFFQSSESVFELQMV*SSLSVF
Trigger: AAATACTGATAGGGAAGACCAGACCATCTGTAATTC...AAAGACTGATTCGGAACTTTGGAAAAACTGTGAGACCAGGTGGTTACAGCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535049.5
3UTR CAA 72 bp GTGGCTTGTATTTCAAAGGGTTTATCTGTCCATTTATaGTCCAGGGTGGGACACAAGTTAATTCAGAACAAT +
Preference number: 4 (lower is better)
Translates to: VACISKGLSVHL*SRVGHKLIQNN
Trigger: ATTGTTCTGAATTAACTTGTGTCCCACCCTGGACAATAAATGGACAGATAAACCCTTTGAAATACAAGCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR TCA 90 bp TTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCCAGGTAACTGAGAAGTaGCATTACTTGCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: FNGYKSQRFAEVRKTWNFQVTEK*HYLLVK
Trigger: TTTCACAAGCAAGTAATGTCACTTCTCAGTTACCTG...GAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR TCA 90 bp TTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTCTACTTGCTTGACCTaGGCTTCAAGTTTTGAAATC +
Preference number: 4 (lower is better)
Translates to: FNGYKSQRFAEVRKTWNFSTCLT*ASSFEI
Trigger: GATTTCAAAACTTGAAGCTCAGGTCAAGCAAGTAGA...GAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR GCA 90 bp TTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTCGACTAGTAGCTTCATaGAAAGCACTATCTAATTGG +
Preference number: 4 (lower is better)
Translates to: LMATNLKDLQRCAKHGISRLVAS*KALSNW
Trigger: CCAATTAGATAGTGCTTTGCATGAAGCTACTAGTCG...AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CCA 90 bp ATATCCTTCAGTGACGGTAGCTTCATCTCATTACTAGTATTAGACTGGTTTGGTGCAACTATCTGTTCTTaGCATTGTTTTTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: ISFSDGSFISLLVLDWFGATICS*HCFSTK
Trigger: TTTGGTGGAAAAACAATGCCAAGAACAGATAGTTGC...ACCAAACCAGTCTAATACTAGTAATGAGATGAAGCTACCGTCACTGAAGGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CCA 90 bp TCAAAATTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAGACATCCAAGCATTTaGAGTTTCATCTGGTTTACT +
Preference number: 4 (lower is better)
Translates to: SKFNGYKSQRFAEVRKTWRHPSI*SFIWFT
Trigger: AGTAAACCAGATGAAACTCCAAATGCTTGGATGTCT...CCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS GCA 90 bp ACCCGAGGGAGCGCGCGCGCGCCCGGCGTCTCTCCAGTGATTGGCTaGCCGGAAGGAGGCGGAGACAGCCTCGCATGGCGCGCGCGTCCA +
Preference number: 5 (lower is better)
Translates to: TRGSARAPGVSPVIG*PEGGGDSLAWRARP
Trigger: TGGACGCGCGCGCCATGCGAGGCTGTCTCCGCCTCCTTCCGGGCAGCCAATCACTGGAGAGACGCCGGGCGCGCGCGCGCTCCCTCGGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539639.5
CDS CCA 90 bp CGTTACCCGAGGGAGCGCGCGCGCGCCCGGCGTCTCTCCAGTGATTaGCTGCCCGGAAGGAGGCGGAGACAGCCTCGCATGGCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: RYPRERARARRLSSD*LPGRRRRQPRMARA
Trigger: CGCGCGCGCCATGCGAGGCTGTCTCCGCCTCCTTCCGGGCAGCCAATCACTGGAGAGACGCCGGGCGCGCGCGCGCTCCCTCGGGTAACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539639.5
CDS GCA 90 bp TCCAAGAGAGTCTGGCCGCCGCTCCCGCTGCCGATGTCAGGGTCATaGAAGCGGCCTCTCGCGACCGTTACCCGAGGGAGCGCGCGCGCG +
Preference number: 5 (lower is better)
Translates to: SKRVWPPLPLPMSGS*KRPLATVTRGSARA
Trigger: CGCGCGCGCGCTCCCTCGGGTAACGGTCGCGAGAGGCCGCTTGCATGACCCTGACATCGGCAGCGGGAGCGGCGGCCAGACTCTCTTGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537854.5
ENST00000539639.5
CDS TCA 90 bp GATCTCACAGTGGGCTCAAGAGACAGCAGCAGGCTCAGGGGAAGTTaGCCGAGGGTGAGGTGGACAGGCTGGGAGCAAAGCTGTGGAGTG +
Preference number: 5 (lower is better)
Translates to: DLTVGSRDSSRLRGS*PRVRWTGWEQSCGV
Trigger: CACTCCACAGCTTTGCTCCCAGCCTGTCCACCTCACCCTCGGTCAACTTCCCCTGAGCCTGCTGCTGTCTCTTGAGCCCACTGTGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545406.1
CDS CCA 90 bp TCCATCCTGCTTCCTCCTCAGTGGGTATCTATCTGGATCTCACAGTaGGCTCAAGAGACAGCAGCAGGCTCAGGGGAAGTTGACCGAGGG +
Preference number: 5 (lower is better)
Translates to: SILLPPQWVSIWISQ*AQETAAGSGEVDRG
Trigger: CCCTCGGTCAACTTCCCCTGAGCCTGCTGCTGTCTCTTGAGCCCACTGTGAGATCCAGATAGATACCCACTGAGGAGGAAGCAGGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545406.1
CDS-3UTR CAA 90 bp TGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTGGCTAGATCTTTCTTCACTCCATTaGGCACCGGTTCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: WSLLPRSLQLHDSSIWLDLSSLH*APVQGK
Trigger: CTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAAG...ATCTAGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGAAGTTGCTAGTGTGTaGGCACGCGAGGGTCTCACG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQREVASV*AREGLT
Trigger: CGTGAGACCCTCGCGTGCCAACACACTAGCAACTTC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp GTGACTCAGCCGGCACCGCAGGTGCTACATACTGTCCTTTGGGAACATCTATGTCTTTCTTCACTCCATTaGGCACCGGTTCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: VTQPAPQVLHTVLWEHLCLSSLH*APVQGK
Trigger: CTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAAG...ACATAGATGTTCCCAAAGGACAGTATGTAGCACCTGCGGTGCCGGCTGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTCATTCTGGGACACTGTaGGCTGTACCTGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: PPGEGILLSAASIWSFSFHSGTL*AVPGSW
Trigger: CCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAATG...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CAA 90 bp GTGCTGAGGATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATGAAGTTGCTAGTGTGTaGGCACGCGAGGGTCTCACG +
Preference number: 5 (lower is better)
Translates to: VLRIQEKPETGKQRAQIDEVASV*AREGLT
Trigger: CGTGAGACCCTCGCGTGCCAACACACTAGCAACTTC...ATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTATCCTCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCTTTCTTCACTCCATTaGGCACCGGTTCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRLSSLH*APVQGK
Trigger: CTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAAG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTGGCTAGATACTGGAGTTGCTTTCTaGGATTGGTACGTTGTAATG +
Preference number: 5 (lower is better)
Translates to: WSLLPRSLQLHDSSIWLDTGVAF*DWYVVM
Trigger: CATTACAACGTACCAATCCAAGAAAGCAACTCCAGT...ATCTAGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CAA 90 bp GCCTGTAGTGCAAGAAAGAGAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCAGGAAGAAACTGGAGTaGCTTTCTTGGATTGGTACG +
Preference number: 5 (lower is better)
Translates to: ACSARKRDGPCSRGAYSFRKKLE*LSWIGT
Trigger: CGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCCT...GAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTCTCTTTCTTGCACTACAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CAA 90 bp TGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTGGCTAGATAGCCACAAGTATTTATaGAGTGCCTGTAGTGCAAGA +
Preference number: 5 (lower is better)
Translates to: WSLLPRSLQLHDSSIWLDSHKYL*SACSAR
Trigger: TCTTGCACTACAGGCACTCAATAAATACTTGTGGCT...ATCTAGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGAGCAACTATCCACATaGCAGTCTGGTTGTGACGTG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQREQLST*QSGCDV
Trigger: CACGTCACAACCAGACTGCAATGTGGATAGTTGCTC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCGTTCCTGCAAAATTTaGGAAGCACTGCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRRSCKI*EALLAA
Trigger: TGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp GAGATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTGGCTGTATATCAAATCGAATaGGACTGCTCTCATTTTTGC +
Preference number: 5 (lower is better)
Translates to: EMVPAPAELTASRLQHLAVYQIE*DCSHFC
Trigger: GCAAAAATGAGAGCAGTCCAATTCGATTTGATATAC...AGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CAA 90 bp ATGGTCCCTGCTCCCGCGGAGCTTACAGCTTCACGACTCCAGCATCTGGCTAGAAGTTGCTTTCTTGGATaGGTACGTTGTAATGTAGAC +
Preference number: 5 (lower is better)
Translates to: MVPAPAELTASRLQHLARSCFLG*VRCNVD
Trigger: GTCTACATTACAACGTACCAATCCAAGAAAGCAACT...TCTAGCCAGATGCTGGAGTCGTGAAGCTGTAAGCTCCGCGGGAGCAGGGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS TCA 90 bp TTCTGGGACACTGTTGGCTGTACCTGGAAGCTGGGACTGACTGACTaGGGCCGAAGCAACCATGACAGTGTTTTCTTCATCTACAGTGTT +
Preference number: 5 (lower is better)
Translates to: FWDTVGCTWKLGLTD*GRSNHDSVFFIYSV
Trigger: AACACTGTAGATGAAGAAAACACTGTCATGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000541076.6
ENST00000606320.6
CDS TCA 90 bp GAAATGCATTCTGGGACACTGTTGGCTGTACCTGGAAGCTGGGACTaGCTGACTGAGGCCGAAGCAACCATGACAGTGTTTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: EMHSGTLLAVPGSWD*LTEAEATMTVFSSS
Trigger: AGATGAAGAAAACACTGTCATGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAATGCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCCACCGGAGAAGCTTTaGTGTGTGAGGGATATTTTG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRPPEKL*CVRDIL
Trigger: CAAAATATCCCTCACACACAAAAGCTTCTCCGGTGG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TTTCTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTGAAGTTGCTAGTGTGTaGGCACGCGAGGGTCTCACG +
Preference number: 5 (lower is better)
Translates to: FLHSIWHRFRARAMINMVEVASV*AREGLT
Trigger: CGTGAGACCCTCGCGTGCCAACACACTAGCAACTTC...AACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGGCGCAGAAGATGTTTaGATGGAGGTTAACGCCTTT +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRGAEDV*MEVNAF
Trigger: AAAGGCGTTAACCTCCATCAAAACATCTTCTGCGCC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTATGTGCTCTCTTTGGTaGGTTCTGCTTCAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: RPPGEGILLSAASIWSFSMCSLW*VLLQFL
Trigger: CAAAAACTGAAGCAGAACCAACCAAAGAGAGCACAT...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCTACATGTGCTCTCTTaGGTTGGTTCTGCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRLHVLS*VGSASV
Trigger: AACTGAAGCAGAACCAACCAAAGAGAGCACATGTAG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTCCACCGGAGAAGCTTTaGTGTGTGAGGGATATTTTG +
Preference number: 5 (lower is better)
Translates to: PPGEGILLSAASIWSFSFPPEKL*CVRDIL
Trigger: CAAAATATCCCTCACACACAAAAGCTTCTCCGGTGG...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGAAGTTGCTAGTGTGTaGGCACGCGAGGGTCTCACG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKEVASV*AREGLT
Trigger: CGTGAGACCCTCGCGTGCCAACACACTAGCAACTTC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGAAGTTGCTAGTGTGTaGGCACGCGAGGGTCTCACG +
Preference number: 5 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSEVASV*AREGLT
Trigger: CGTGAGACCCTCGCGTGCCAACACACTAGCAACTTC...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGCCGAGGATTTATATTaGAGGTGTCCTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRAEDLY*RCPLSL
Trigger: CAGAGAAAGAGGACACCTCAAATATAAATCCTCGGC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCTCTTTTGTCTCTGTaGGGCACACTTTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: KVIRPPGEGILLSAASIWSLLSL*GTLFWR
Trigger: TCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAGA...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTCTCTTTTGTCTCTGTaGGGCACACTTTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSLLSL*GTLFWR
Trigger: TCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAGA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp AGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCCTTTCTTCACTCCATTaGGCACCGGTTCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: RCAKHGISLASCELNPVLLSSLH*APVQGK
Trigger: CTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAAG...GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CAA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTCTTTCTTCACTCCATTaGGCACCGGTTCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: NLVCKVIRPPGEGILLSALSSLH*APVQGK
Trigger: CTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAAG...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CAA 90 bp CGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTACTGGAGTTGCTTTCTaGGATTGGTACGTTGTAATG +
Preference number: 5 (lower is better)
Translates to: RPPGEGILLSAASIWSFSTGVAF*DWYVVM
Trigger: CATTACAACGTACCAATCCAAGAAAGCAACTCCAGT...AGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCAGAAAGAACTTTCCTaGGTATCCCTCTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRQKELS*VSLFTA
Trigger: AGCTGTGAAGAGGGATACCAAGGAAAGTTCTTTCTG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCGAGCAACTATCCACATaGCAGTCTGGTTGTGACGTG +
Preference number: 5 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPEQLST*QSGCDV
Trigger: CACGTCACAACCAGACTGCAATGTGGATAGTTGCTC...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CAA 90 bp CTGCTTACTGAGCAACTATCCACATTGCAGTCTGGTTGTGACGTGGACATTTCTGAGCAACTATCCACATaGCAGTCTGGTTGTGACGTG +
Preference number: 5 (lower is better)
Translates to: LLTEQLSTLQSGCDVDISEQLST*QSGCDV
Trigger: CACGTCACAACCAGACTGCAATGTGGATAGTTGCTC...AGAAATGTCCACGTCACAACCAGACTGCAATGTGGATAGTTGCTCAGTAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATGTGCTCTCTTTGGTaGGTTCTGCTTCAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRMCSLW*VLLQFL
Trigger: CAAAAACTGAAGCAGAACCAACCAAAGAGAGCACAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTCTACATGTGCTCTCTTaGGTTGGTTCTGCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: PPGEGILLSAASIWSFSFLHVLS*VGSASV
Trigger: AACTGAAGCAGAACCAACCAAAGAGAGCACATGTAG...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGCAGACATCCAAGCATTaGGAGTTTCATCTGGTTTAC +
Preference number: 5 (lower is better)
Translates to: KVIRPPGEGILLSAASIWQTSKH*EFHLVY
Trigger: GTAAACCAGATGAAACTCCAAATGCTTGGATGTCTG...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCAGACATCCAAGCATTaGGAGTTTCATCTGGTTTAC +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRQTSKH*EFHLVY
Trigger: GTAAACCAGATGAAACTCCAAATGCTTGGATGTCTG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTCATTCTGGGACACTGTaGGCTGTACCTGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSHSGTL*AVPGSW
Trigger: CCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAATG...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACATTCTGGGACACTGTaGGCTGTACCTGGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKHSGTL*AVPGSW
Trigger: CCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAATG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTCGTTCCTGCAAAATTTaGGAAGCACTGCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: NLVCKVIRPPGEGILLSARSCKI*EALLAA
Trigger: TGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACG...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp AGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCCAGCGTTCCTGCAAAATTTaGGAAGCACTGCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: STAGCTEAFSQIIHFNFQRSCKI*EALLAA
Trigger: TGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACG...CTGGAAATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
CDS-3UTR CAA 90 bp GAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCCCGTTCCTGCAAAATTTaGGAAGCACTGCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: EALLAALKRSLKSFTSISRSCKI*EALLAA
Trigger: TGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACG...GGAAATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606326.1
CDS-3UTR CAA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTGAAGTTGCTAGTGTGTaGGCACGCGAGGGTCTCACG +
Preference number: 5 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILEVASV*AREGLT
Trigger: CGTGAGACCCTCGCGTGCCAACACACTAGCAACTTC...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CAA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTGCCGAGGATTTATATTaGAGGTGTCCTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: PPGEGILLSAASIWSFSFAEDLY*RCPLSL
Trigger: CAGAGAAAGAGGACACCTCAAATATAAATCCTCGGC...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp GGAAGCATTGTTCACGTTCACTCGGCAGAATGTGGACAACTTTACCTCTGGTGGGCCGAGGATTTATATTaGAGGTGTCCTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: GSIVHVHSAECGQLYLWWAEDLY*RCPLSL
Trigger: CAGAGAAAGAGGACACCTCAAATATAAATCCTCGGC...CCACCAGAGGTAAAGTTGTCCACATTCTGCCGAGTGAACGTGAACAATGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCGAATTAAGTCTCTTTaGTCTCTGTTGGGCACACTT +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRRIKSL*SLLGTL
Trigger: AAGTGTGCCCAACAGAGACAAAAGAGACTTAATTCG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGGTTCTTGGGCTGTTaGAGAAAAATGAATCCGTGT +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRRFLGC*RKMNPC
Trigger: ACACGGATTCATTTTTCTCAAACAGCCCAAGAACCT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGCTCCTCCTGTATATGTaGAATTTGGTTGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRLLLYM*NLVVEL
Trigger: CAGTTCCACAACCAAATTCAACATATACAGGAGGAG...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGACTTCAACTGTACCTaGAATTACAGATGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRDFNCT*NYRWSG
Trigger: ACCAGACCATCTGTAATTCAAGGTACAGTTGAAGTC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGACTGGAGTTGCTTTCTaGGATTGGTACGTTGTAATG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRTGVAF*DWYVVM
Trigger: CATTACAACGTACCAATCCAAGAAAGCAACTCCAGT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS TCA 90 bp AGCTGTAACCACCTGGTCTTGAATTACAGATGGTCTGGTCTTCCCTaGGAAAGAGGATACCCCATTTGTACTAAGGTGGGGACTACTTCT +
Preference number: 5 (lower is better)
Translates to: SCNHLVLNYRWSGLP*ERGYPICTKVGTTS
Trigger: AGAAGTAGTCCCCACCTTAGTACAAATGGGGTATCCTCTTTCTCAGGGAAGACCAGACCATCTGTAATTCAAGACCAGGTGGTTACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538169.5
CDS-3UTR CAA 90 bp AGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGCTACATACTGTCCTTaGGGAACATCTATGTGCTCC +
Preference number: 5 (lower is better)
Translates to: RCAKHGISLASCELNPVLATYCP*GTSMCS
Trigger: GGAGCACATAGATGTTCCCAAAGGACAGTATGTAGC...GAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CAA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTCAGACATCCAAGCATTaGGAGTTTCATCTGGTTTAC +
Preference number: 5 (lower is better)
Translates to: PPGEGILLSAASIWSFSFQTSKH*EFHLVY
Trigger: GTAAACCAGATGAAACTCCAAATGCTTGGATGTCTG...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGGGTCCTACTTTCGTTTaGGAATGTCTGATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRGPTFV*ECLIFP
Trigger: TGGAAAAATCAGACATTCCAAAACGAAAGTAGGACC...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGATTTTCATGTTCTACTaGCTTGACCTGAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRIFMFY*LDLSFK
Trigger: CTTGAAGCTCAGGTCAAGCAAGTAGAACATGAAAAT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGTTATCAACAAGCTTGTaGATGAACTTCCAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRLSTSL*MNFQVK
Trigger: CTTCACCTGGAAGTTCATCAACAAGCTTGTTGATAA...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp ACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTCAGAGATCACGCTTTCTCTTTTGTCTCTGTaGGGCACACTTTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: TRNRQAAGTNRFDSEITLSLLSL*GTLFWR
Trigger: TCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAGA...AAGCGTGATCTCTGAGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGACAAATCTCAAAGATTaGCAGAGGTGCGCAAAACAT +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRTNLKD*QRCAKH
Trigger: ATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp AAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTGTTTTTCCACCAAATaGAATAGCTGTAACCACCTG +
Preference number: 5 (lower is better)
Translates to: KVIRPPGEGILLSAASIWCFSTK*NSCNHL
Trigger: CAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACA...CCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAGTTGCTTTCTTGGATaGGTACGTTGTAATGTAGAC +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRSCFLG*VRCNVD
Trigger: GTCTACATTACAACGTACCAATCCAAGAAAGCAACT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS TCA 90 bp CTGCCTAATCTTAGACAATATCACAGGATCTTCCAAGGAAGTCAATaGAATGCATTCTGGGACACTGTTGGCTGTACCTGGAAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: LPNLRQYHRIFQGSQ*NAFWDTVGCTWKLG
Trigger: TCCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGAATGCATTTCATTGACTTCCTTGGAAGATCCTGTGATATTGTCTAAGATTAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000541076.6
ENST00000606320.6
CDS TCA 90 bp ATTCCTCACATATCTGAGGGGTCTGATTTAATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAA +
Preference number: 5 (lower is better)
Translates to: IPHISEGSDLILSVK*FVLQEKASCLVLPQ
Trigger: TTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAATCAGACCCCTCAGATATGTGAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGAGCAACTATCCACATaGCAGTCTGGTTGTGACGTG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKEQLST*QSGCDV
Trigger: CACGTCACAACCAGACTGCAATGTGGATAGTTGCTC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp CCTCCAGGAGAAGGCATCCTGCTTAGTGCTGCCTCAATCTGGTCCTTTTCTTTTGGTCCTACTTTCGTTTaGGAATGTCTGATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: PPGEGILLSAASIWSFSFGPTFV*ECLIFP
Trigger: TGGAAAAATCAGACATTCCAAAACGAAAGTAGGACC...AAAAGAAAAGGACCAGATTGAGGCAGCACTAAGCAGGATGCCTTCTCCTGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CAA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTCGTTCCTGCAAAATTTaGGAAGCACTGCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSRSCKI*EALLAA
Trigger: TGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACG...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCTCTCTTTTGTCTCTGTaGGGCACACTTTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPSLLSL*GTLFWR
Trigger: TCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAGA...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CAA 90 bp TTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTCTCAGAATAAGTCTTTCTTCACTCCATTaGGCACCGGTTCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: FRARAMINMVIGGFLRISLSSLH*APVQGK
Trigger: CTTGCCCTGAACCGGTGCCAAATGGAGTGAAGAAAG...ACTTATTCTGAGAAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGACAGAAGATGAAGTTTaGTGTAAGGTTTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRTEDEV*CKVFTK
Trigger: CTTGGTGAAAACCTTACACAAAACTTCATCTTCTGT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp GCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTGGCAACTATCTGTTCTaGGCATTGTTTTTCCACCAA +
Preference number: 5 (lower is better)
Translates to: AEVRKTWNFFSVMRTEPSGNYLF*ALFFHQ
Trigger: TTGGTGGAAAAACAATGCCAAGAACAGATAGTTGCC...ACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp TTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGGAAGAAACTGGAGTaGCTTTCTTGGATTGGTACG +
Preference number: 5 (lower is better)
Translates to: FAEVRKTWNFFSVMRTEPRKKLE*LSWIGT
Trigger: CGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCCT...GGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CAA 90 bp TCCAACTTAACCAGCAGTCCCAACACAAACCTGCCAATGCTCCTGGATCAGAGGAATAACTGGGATGGCTaGGTTCATTCTAACTACTTA +
Preference number: 5 (lower is better)
Translates to: SNLTSSPNTNLPMLLDQRNNWDG*VHSNYL
Trigger: TAAGTAGTTAGAATGAACCAAGCCATCCCAGTTATT...CCTCTGATCCAGGAGCATTGGCAGGTTTGTGTTGGGACTGCTGGTTAAGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp CTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCCCTACGGCTCACTTTTaGAACCTCTACAGCTATTCA +
Preference number: 5 (lower is better)
Translates to: LHSIWHRFRARAMINMVIPTAHF*NLYSYS
Trigger: TGAATAGCTGTAGAGGTTCAAAAAGTGAGCCGTAGG...GATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS-3UTR CAA 90 bp AGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTCAGAGATCACGCTTTTGTCAGAGATCACGCTTTaGAACCCAAGAGATGTACAC +
Preference number: 5 (lower is better)
Translates to: RNRQAAGTNRFDSEITLLSEITL*NPRDVH
Trigger: GTGTACATCTCTTGGGTTCAAAAGCGTGATCTCTGA...CAAAAGCGTGATCTCTGAGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS TCA 90 bp GGCAAGCAGCGGGCACAAATAGATTTGACTCAGAGATCACGCTTTTaGACCCAAGAGATGTACACATCTAACTCTTACTTGGAGTACTTG +
Preference number: 5 (lower is better)
Translates to: GKQRAQIDLTQRSRF*TQEMYTSNSYLEYL
Trigger: CAAGTACTCCAAGTAAGAGTTAGATGTGTACATCTCTTGGGTTCAAAAGCGTGATCTCTGAGTCAAATCTATTTGTGCCCGCTGCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CAA 90 bp CTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCATGTGCTCTCTTTGGTaGGTTCTGCTTCAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: LHSIWHRFRARAMINMVIMCSLW*VLLQFL
Trigger: CAAAAACTGAAGCAGAACCAACCAAAGAGAGCACAT...GATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCCAGACATCCAAGCATTaGGAGTTTCATCTGGTTTAC +
Preference number: 5 (lower is better)
Translates to: LVVELLLLGNYLFLALFFQTSKH*EFHLVY
Trigger: GTAAACCAGATGAAACTCCAAATGCTTGGATGTCTG...GAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTTGTGTGAGGGATATTTaGGAAATCCAGGTAACTGAG +
Preference number: 5 (lower is better)
Translates to: NLVCKVIRPPGEGILLSACVRDI*EIQVTE
Trigger: CTCAGTTACCTGGATTTCCAAAATATCCCTCACACA...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CAA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTTGTGTGAGGGATATTTaGGAAATCCAGGTAACTGAG +
Preference number: 5 (lower is better)
Translates to: IWHRFRARAMINMVIGGFCVRDI*EIQVTE
Trigger: CTCAGTTACCTGGATTTCCAAAATATCCCTCACACA...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACCACCGGAGAAGCTTTaGTGTGTGAGGGATATTTTG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKPPEKL*CVRDIL
Trigger: CAAAATATCCCTCACACACAAAAGCTTCTCCGGTGG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp GCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTTATCAACAAGCTTGTaGATGAACTTCCAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: AEVRKTWNFFSVMRTEPSLSTSL*MNFQVK
Trigger: CTTCACCTGGAAGTTCATCAACAAGCTTGTTGATAA...ACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CAA 90 bp GTGCTGAGGATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTATCAACAAGCTTGTaGATGAACTTCCAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: VLRIQEKPETGKQRAQIDLSTSL*MNFQVK
Trigger: CTTCACCTGGAAGTTCATCAACAAGCTTGTTGATAA...ATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTATCCTCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CAA 90 bp ATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTCAGGCCGAGGATTTATATTaGAGGTGTCCTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: IQEKPETGKQRAQIDLTQAEDLY*RCPLSL
Trigger: CAGAGAAAGAGGACACCTCAAATATAAATCCTCGGC...CTGAGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CAA 90 bp TTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCAAATCATTCACTTCAATTTCTCTTTTGTCTCTGTaGGGCACACTTTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LEALLAALKRSLKSFTSISLLSL*GTLFWR
Trigger: TCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAGA...AATTGAAGTGAATGATTTGAGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTCGAATTAAGTCTCTTTaGTCTCTGTTGGGCACACTT +
Preference number: 5 (lower is better)
Translates to: IWHRFRARAMINMVIGGFRIKSL*SLLGTL
Trigger: AAGTGTGCCCAACAGAGACAAAAGAGACTTAATTCG...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp AATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTCGAATTAAGTCTCTTTaGTCTCTGTTGGGCACACTT +
Preference number: 5 (lower is better)
Translates to: NSFLQNFGSTAGCTEAFSRIKSL*SLLGTL
Trigger: AAGTGTGCCCAACAGAGACAAAAGAGACTTAATTCG...AGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp CTCCTGTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGCTCCTCCTGTATATGTaGAATTTGGTTGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: LLYMLNLVVELLLLGNYLLLLYM*NLVVEL
Trigger: CAGTTCCACAACCAAATTCAACATATACAGGAGGAG...CAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCGACTTCAACTGTACCTaGAATTACAGATGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: LVVELLLLGNYLFLALFFDFNCT*NYRWSG
Trigger: ACCAGACCATCTGTAATTCAAGGTACAGTTGAAGTC...GAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR CAA 90 bp GAATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTACTGGAGTTGCTTTCTaGGATTGGTACGTTGTAATG +
Preference number: 5 (lower is better)
Translates to: EFGCGTAPAGQLSVLGIVTGVAF*DWYVVM
Trigger: CATTACAACGTACCAATCCAAGAAAGCAACTCCAGT...AACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp AGGATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTCGGGCACAAATAGATTaGACTCAGAGATCACGCTTT +
Preference number: 5 (lower is better)
Translates to: RIQEKPETGKQRAQIDLTRAQID*TQRSRF
Trigger: AAAGCGTGATCTCTGAGTCAAATCTATTTGTGCCCG...AGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CAA 90 bp ATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTATGTGCTCTCTTTGGTaGGTTCTGCTTCAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: IWLWNCSCWATICSWHCFMCSLW*VLLQFL
Trigger: CAAAAACTGAAGCAGAACCAACCAAAGAGAGCACAT...AAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTCTACATGTGCTCTCTTaGGTTGGTTCTGCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSLHVLS*VGSASV
Trigger: AACTGAAGCAGAACCAACCAAAGAGAGCACATGTAG...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TCAATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTATTTTCATGTTCTACTaGCTTGACCTGAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SIRSCKILEALLAALKRSIFMFY*LDLSFK
Trigger: CTTGAAGCTCAGGTCAAGCAAGTAGAACATGAAAAT...AGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp CTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCTTATCAACAAGCTTGTaGATGAACTTCCAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LHSIWHRFRARAMINMVILSTSL*MNFQVK
Trigger: CTTCACCTGGAAGTTCATCAACAAGCTTGTTGATAA...GATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp AATTCGTTCCTGCAAAATTTTGGAAGCACTGCTGGCTGCACTGAAGCGTTCTCTTTATCAACAAGCTTGTaGATGAACTTCCAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: NSFLQNFGSTAGCTEAFSLSTSL*MNFQVK
Trigger: CTTCACCTGGAAGTTCATCAACAAGCTTGTTGATAA...AGAGAACGCTTCAGTGCAGCCAGCAGTGCTTCCAAAATTTTGCAGGAACGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp TTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTTCCAAACGAGCCGAGGATTTATATTaGAGGTGTCCTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: FFSVMRTEPSSRLILSKRAEDLY*RCPLSL
Trigger: CAGAGAAAGAGGACACCTCAAATATAAATCCTCGGC...TCGTTTGGAAAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATCTCTTTTGTCTCTGTaGGGCACACTTTTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSLLSL*GTLFWR
Trigger: TCTCCAGAAAAGTGTGCCCAACAGAGACAAAAGAGA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp AGGATACAAGAGAAACCAGAAACAGGCAAGCAGCGGGCACAAATAGATTTGACTCGAATTAAGTCTCTTTaGTCTCTGTTGGGCACACTT +
Preference number: 5 (lower is better)
Translates to: RIQEKPETGKQRAQIDLTRIKSL*SLLGTL
Trigger: AAGTGTGCCCAACAGAGACAAAAGAGACTTAATTCG...AGTCAAATCTATTTGTGCCCGCTGCTTGCCTGTTTCTGGTTTCTCTTGTATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS-3UTR CAA 90 bp AATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGCTACAAATCTCAAAGATTaGCAGAGGTGCGCAAAACAT +
Preference number: 5 (lower is better)
Translates to: NLVCKVIRPPGEGILLSATNLKD*QRCAKH
Trigger: ATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGT...AGCACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CAA 90 bp CTTCACTCCATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCACAAATCTCAAAGATTaGCAGAGGTGCGCAAAACAT +
Preference number: 5 (lower is better)
Translates to: LHSIWHRFRARAMINMVITNLKD*QRCAKH
Trigger: ATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGT...GATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAATGGAGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CAA 90 bp AATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTGGCAACTATCTGTTCTaGGCATTGTTTTTCCACCAA +
Preference number: 5 (lower is better)
Translates to: NLVVELLLLGNYLFLALFGNYLF*ALFFHQ
Trigger: TTGGTGGAAAAACAATGCCAAGAACAGATAGTTGCC...AAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR CAA 90 bp ATTTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTCTGTATATGTTGAATTaGGTTGTGGAACTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: IWLWNCSCWATICSWHCFLYMLN*VVELLL
Trigger: CAGGAGCAGTTCCACAACCAAATTCAACATATACAG...AAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TTTTATCTCCTCCTGTATATGTTGAATTTGGTTGTGGAACTGCTCCTGCTGGGCCTCCTCCTGTATATGTaGAATTTGGTTGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: FYLLLYMLNLVVELLLLGLLLYM*NLVVEL
Trigger: CAGTTCCACAACCAAATTCAACATATACAGGAGGAG...GCCCAGCAGGAGCAGTTCCACAACCAAATTCAACATATACAGGAGGAGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCCGTATATCAAATCGAATaGGACTGCTCTCATTTTTGC +
Preference number: 5 (lower is better)
Translates to: WLWNCSCWATICSWHCFSVYQIE*DCSHFC
Trigger: GCAAAAATGAGAGCAGTCCAATTCGATTTGATATAC...GGAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGGAAGAAACTGGAGTaGCTTTCTTGGATTGGTACG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKRKKLE*LSWIGT
Trigger: CGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCCT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTAGGAAGAAACTGGAGTaGCTTTCTTGGATTGGTACG +
Preference number: 5 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSRKKLE*LSWIGT
Trigger: CGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCCT...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACAGAAAGAACTTTCCTaGGTATCCCTCTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKQKELS*VSLFTA
Trigger: AGCTGTGAAGAGGGATACCAAGGAAAGTTCTTTCTG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAATGTGCTCTCTTTGGTaGGTTCTGCTTCAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKMCSLW*VLLQFL
Trigger: CAAAAACTGAAGCAGAACCAACCAAAGAGAGCACAT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATGTGTGAGGGATATTTaGGAAATCCAGGTAACTGAG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKCVRDI*EIQVTE
Trigger: CTCAGTTACCTGGATTTCCAAAATATCCCTCACACA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp ATTTGGCACCGGTTCAGGGCAAGAGCTATGATTAACATGGTTATCGGTGGCTTTTCTTCATCTACAGTGTaGACCGAGATATCATTACTA +
Preference number: 5 (lower is better)
Translates to: IWHRFRARAMINMVIGGFSSSTV*TEISLL
Trigger: TAGTAATGATATCTCGGTCAACACTGTAGATGAAGA...AAAGCCACCGATAACCATGTTAATCATAGCTCTTGCCCTGAACCGGTGCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACGAATTAAGTCTCTTTaGTCTCTGTTGGGCACACTT +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKRIKSL*SLLGTL
Trigger: AAGTGTGCCCAACAGAGACAAAAGAGACTTAATTCG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TTGGTTGTGGAACTGCTCCTGCTGGGCAACTATCTGTTCTTGGCATTGTTTTTCACAGAAGATGAAGTTTaGTGTAAGGTTTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: LVVELLLLGNYLFLALFFTEDEV*CKVFTK
Trigger: CTTGGTGAAAACCTTACACAAAACTTCATCTTCTGT...GAAAAACAATGCCAAGAACAGATAGTTGCCCAGCAGGAGCAGTTCCACAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535049.5
ENST00000545556.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGGCAACTATCTGTTCTaGGCATTGTTTTTCCACCAA +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKGNYLF*ALFFHQ
Trigger: TTGGTGGAAAAACAATGCCAAGAACAGATAGTTGCC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAACTGTATATGTTGAATTaGGTTGTGGAACTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLYMLN*VVELLL
Trigger: CAGGAGCAGTTCCACAACCAAATTCAACATATACAG...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAACTGGAGTTGCTTTCTaGGATTGGTACGTTGTAATG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKTGVAF*DWYVVM
Trigger: CATTACAACGTACCAATCCAAGAAAGCAACTCCAGT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS TCA 90 bp TTTTGTAGCTCTTGCATTAAAGAAGTTAGGACTTCAACTGTACCTTaGATTACAGATGGTCTGGTCTTCCCTGAGAAAGAGGATACCCCA +
Preference number: 5 (lower is better)
Translates to: FCSSCIKEVRTSTVP*ITDGLVFPEKEDTP
Trigger: TGGGGTATCCTCTTTCTCAGGGAAGACCAGACCATCTGTAATTCAAGGTACAGTTGAAGTCCTAACTTCTTTAATGCAAGAGCTACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000541076.6
ENST00000541437.5
ENST00000545406.1
ENST00000545556.6
ENST00000606320.6
CDS CCA 90 bp ATCCGTGTCATCTTCAGAGGCTTCATCATCTACTGGCATTTTCAGTaGCTAACATTCAGAACTGTGAAATATCCTAAACTTCCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: IRVIFRGFIIYWHFQ*LTFRTVKYPKLPRE
Trigger: CTCTCTTGGAAGTTTAGGATATTTCACAGTTCTGAATGTTAGCCACTGAAAATGCCAGTAGATGATGAAGCCTCTGAAGATGACACGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000369865.3
ENST00000535049.5
ENST00000537854.5
ENST00000538169.5
ENST00000539639.5
ENST00000541437.5
ENST00000545406.1
ENST00000545556.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTGGTCCTACTTTCGTTTaGGAATGTCTGATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSGPTFV*ECLIFP
Trigger: TGGAAAAATCAGACATTCCAAAACGAAAGTAGGACC...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000539024.5
CDS-3UTR CAA 90 bp TTTAATCTTGTCTGTAAAGTGATTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTATTTTCATGTTCTACTaGCTTGACCTGAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: FNLVCKVIRPPGEGILLSIFMFY*LDLSFK
Trigger: CTTGAAGCTCAGGTCAAGCAAGTAGAACATGAAAAT...ACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAATTTTCATGTTCTACTaGCTTGACCTGAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKIFMFY*LDLSFK
Trigger: CTTGAAGCTCAGGTCAAGCAAGTAGAACATGAAAAT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATTATCAACAAGCTTGTaGATGAACTTCCAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKLSTSL*MNFQVK
Trigger: CTTCACCTGGAAGTTCATCAACAAGCTTGTTGATAA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp CTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAAACAAATCTCAAAGATTaGCAGAGGTGCGCAAAACAT +
Preference number: 5 (lower is better)
Translates to: LKDLQRCAKHGISLASCETNLKD*QRCAKH
Trigger: ATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGT...TTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATGTTTTTCCACCAAATaGAATAGCTGTAACCACCTG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKCFSTK*NSCNHL
Trigger: CAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606320.6
CDS-3UTR CAA 90 bp AATAGCTGTAACCACCTGGTCTCACAGTTTTTCCAAAGTTCCGAATCAGTCTTTGACTTCAACTGTACCTaGAATTACAGATGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: NSCNHLVSQFFQSSESVFDFNCT*NYRWSG
Trigger: ACCAGACCATCTGTAATTCAAGGTACAGTTGAAGTC...AAAGACTGATTCGGAACTTTGGAAAAACTGTGAGACCAGGTGGTTACAGCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535049.5
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAGTTGCTTTCTTGGATaGGTACGTTGTAATGTAGAC +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSCFLG*VRCNVD
Trigger: GTCTACATTACAACGTACCAATCCAAGAAAGCAACT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp CGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAAGTTGCTTTCTTGGATaGGTACGTTGTAATGTAGAC +
Preference number: 5 (lower is better)
Translates to: RKTWNFFSVMRTEPSSRLSCFLG*VRCNVD
Trigger: GTCTACATTACAACGTACCAATCCAAGAAAGCAACT...TAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606704.1
CDS-3UTR CAA 90 bp TTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCCTACATGTGCTCTCTTaGGTTGGTTCTGCTTCAGTT +
Preference number: 5 (lower is better)
Translates to: FNGYKSQRFAEVRKTWNFLHVLS*VGSASV
Trigger: AACTGAAGCAGAACCAACCAAAGAGAGCACATGTAG...GAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAATCTTCATCTACAGTGTaGACCGAGATATCATTACTA +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKSSSTV*TEISLL
Trigger: TAGTAATGATATCTCGGTCAACACTGTAGATGAAGA...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCAATTTTCATGTTCTACTaGCTTGACCTGAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: IYSSPRLFSQILSSLHLAIFMFY*LDLSFK
Trigger: CTTGAAGCTCAGGTCAAGCAAGTAGAACATGAAAAT...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000545556.6
CDS-3UTR CAA 90 bp TGTTTTTCCACCAAATTGAATAGCTGTAACCACCTGGTCTCACAGTTTTTCCAAAGGTTCTTGGGCTGTTaGAGAAAAATGAATCCGTGT +
Preference number: 5 (lower is better)
Translates to: CFSTKLNSCNHLVSQFFQRFLGC*RKMNPC
Trigger: ACACGGATTCATTTTTCTCAAACAGCCCAAGAACCT...TTGGAAAAACTGTGAGACCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000535049.5
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAACAGAAGATGAAGTTTaGTGTAAGGTTTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKTEDEV*CKVFTK
Trigger: CTTGGTGAAAACCTTACACAAAACTTCATCTTCTGT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp TTCTTATTTTCAAGTGTTCTCACGCGACTAGTAGCTTCATGCAAAGCACTATCTCTGTATATGTTGAATTaGGTTGTGGAACTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: FLFSSVLTRLVASCKALSLYMLN*VVELLL
Trigger: CAGGAGCAGTTCCACAACCAAATTCAACATATACAG...AGATAGTGCTTTGCATGAAGCTACTAGTCGCGTGAGAACACTTGAAAATAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAGTATATCAAATCGAATaGGACTGCTCTCATTTTTGC +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKVYQIE*DCSHFC
Trigger: GCAAAAATGAGAGCAGTCCAATTCGATTTGATATAC...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp ACATATCCAGATGACAACTATGACGGACAGCTGAAGCCATGCACACTAAGAAAAAATAACTGGGATGGCTaGGTTCATTCTAACTACTTA +
Preference number: 5 (lower is better)
Translates to: TYPDDNYDGQLKPCTLRKNNWDG*VHSNYL
Trigger: TAAGTAGTTAGAATGAACCAAGCCATCCCAGTTATT...TTTTCTTAGTGTGCATGGCTTCAGCTGTCCGTCATAGTTGTCATCTGGATATGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp AGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGCGTCATGCGAACTGAAGCAGCAAAATCAGATTaGCTCATTTCCTTGTTTAGA +
Preference number: 5 (lower is better)
Translates to: RFAEVRKTWNFFSVMRTEAAKSD*LISLFR
Trigger: TCTAAACAAGGAAATGAGCAAATCTGATTTTGCTGC...TTCAGTTCGCATGACGCTAAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp TTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTCGAATTAAGTCTCTTTaGTCTCTGTTGGGCACACTT +
Preference number: 5 (lower is better)
Translates to: LMATNLKDLQRCAKHGISRIKSL*SLLGTL
Trigger: AAGTGTGCCCAACAGAGACAAAAGAGACTTAATTCG...AGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302373.8
ENST00000545556.6
CDS-3UTR CAA 90 bp TCAAAATTTAATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAGGTTCTTGGGCTGTTaGAGAAAAATGAATCCGTGT +
Preference number: 5 (lower is better)
Translates to: SKFNGYKSQRFAEVRKTWRFLGC*RKMNPC
Trigger: ACACGGATTCATTTTTCTCAAACAGCCCAAGAACCT...CCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATTAAATTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp ACATGGAATTTCTTTAGCGTCATGCGAACTGAACCCAGTTCTCGATTAATCCTTACAGAAGATGAAGTTTaGTGTAAGGTTTTCACCAAG +
Preference number: 5 (lower is better)
Translates to: TWNFFSVMRTEPSSRLILTEDEV*CKVFTK
Trigger: CTTGGTGAAAACCTTACACAAAACTTCATCTTCTGT...AAGGATTAATCGAGAACTGGGTTCAGTTCGCATGACGCTAAAGAAATTCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545556.6
CDS-3UTR CAA 90 bp TGTTTTTCCACCAAATTGAATAGCTGTAACCACCTGGTCTCACAGTTTTTCCAATGTTTTTCCACCAAATaGAATAGCTGTAACCACCTG +
Preference number: 5 (lower is better)
Translates to: CFSTKLNSCNHLVSQFFQCFSTK*NSCNHL
Trigger: CAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACA...TTGGAAAAACTGTGAGACCAGGTGGTTACAGCTATTCAATTTGGTGGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000535049.5
CDS-3UTR CAA 90 bp ATTTATTCTTCTCCCAGGCTGTTCTCACAGATACTTTCTTCACTCCATTTGGCACTGTTGAAAAGCATATaGCCATTTGCTCTCAAGTTA +
Preference number: 5 (lower is better)
Translates to: IYSSPRLFSQILSSLHLALLKSI*PFALKL
Trigger: TAACTTGAGAGCAAATGGCAATATGCTTTTCAACAG...TGCCAAATGGAGTGAAGAAAGTATCTGTGAGAACAGCCTGGGAGAAGAATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539024.5
CDS GCA 90 bp GTAGCAGCAGCAAAATCAGATTTCTCAATTGGTGTCTTCTTACTTTaGTCATTTCCTTGTTTAGATCTTGAACCTCCATCTTCTACATGT +
Preference number: 5 (lower is better)
Translates to: VAAAKSDFSIGVFLL*SFPCLDLEPPSSTC
Trigger: ACATGTAGAAGATGGAGGTTCAAGATCTAAACAAGGAAATGAGCAAAGTAAGAAGACACCAATTGAGAAATCTGATTTTGCTGCTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000539336.2
ENST00000541076.6
ENST00000606320.6
CDS-3UTR CAA 90 bp AATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTAGTTGCTTTCTTGGATaGGTACGTTGTAATGTAGAC +
Preference number: 5 (lower is better)
Translates to: NGYKSQRFAEVRKTWNFFSCFLG*VRCNVD
Trigger: GTCTACATTACAACGTACCAATCCAAGAAAGCAACT...AAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545556.6
ENST00000606704.1
CDS TCA 90 bp ATGGTCTGGTCTTCCCTATCAGTATTTAAGTTCAGTCCAAGAGAATaGAGAGAATTTTCATCAGATCCTACAGAAGATGAAGTTTTGTGT +
Preference number: 5 (lower is better)
Translates to: MVWSSLSVFKFSPRE*REFSSDPTEDEVLC
Trigger: ACACAAAACTTCATCTTCTGTAGGATCTGATGAAAATTCTCTTCATTCTCTTGGACTGAACTTAAATACTGATAGGGAAGACCAGACCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535049.5
CDS-3UTR CAA 90 bp AATGGCTACAAATCTCAAAGATTTGCAGAGGTGCGCAAAACATGGAATTTCTTTTCTTCATCTACAGTGTaGACCGAGATATCATTACTA +
Preference number: 5 (lower is better)
Translates to: NGYKSQRFAEVRKTWNFFSSSTV*TEISLL
Trigger: TAGTAATGATATCTCGGTCAACACTGTAGATGAAGA...AAAGAAATTCCATGTTTTGCGCACCTCTGCAAATCTTTGAGATTTGTAGCCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302373.8
CDS-3UTR CAA 90 bp AGTAAGTTATTCTTATTTTCAAGTGTTCTCACGCGACTAGTAGCTTCATGCAAATCTTCATCTACAGTGTaGACCGAGATATCATTACTA +
Preference number: 5 (lower is better)
Translates to: SKLFLFSSVLTRLVASCKSSSTV*TEISLL
Trigger: TAGTAATGATATCTCGGTCAACACTGTAGATGAAGA...TTTGCATGAAGCTACTAGTCGCGTGAGAACACTTGAAAATAAGAATAACTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606326.1
CDS GCA 72 bp AGCGCGCGCGCGCCCGGCGTCTCTCCAGTGATTGGCTaGCCGGAAGGAGGCGGAGACAGCCTCGCATGGCGC +
Preference number: 6 (lower is better)
Translates to: SARAPGVSPVIG*PEGGGDSLAWR
Trigger: GCGCCATGCGAGGCTGTCTCCGCCTCCTTCCGGGCAGCCAATCACTGGAGAGACGCCGGGCGCGCGCGCGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539639.5
CDS GCA 72 bp GTCTGGCCGCCGCTCCCGCTGCCGATGTCAGGGTCATaGAAGCGGCCTCTCGCGACCGTTACCCGAGGGAGC +
Preference number: 6 (lower is better)
Translates to: VWPPLPLPMSGS*KRPLATVTRGS
Trigger: GCTCCCTCGGGTAACGGTCGCGAGAGGCCGCTTGCATGACCCTGACATCGGCAGCGGGAGCGGCGGCCAGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537854.5
ENST00000539639.5
CDS GCA 72 bp CCTAAACTTCCAAGAGAGTCTGGCCGCCGCTCCCGCTaGCGATGTCAGGGTCATGCAAGCGGCCTCTCGCGA +
Preference number: 6 (lower is better)
Translates to: PKLPRESGRRSR*RCQGHASGLSR
Trigger: TCGCGAGAGGCCGCTTGCATGACCCTGACATCGGCAGCGGGAGCGGCGGCCAGACTCTCTTGGAAGTTTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537854.5
ENST00000538169.5
ENST00000539639.5
ENST00000606320.6
CDS CAA 72 bp AGTGGGCTCAAGAGACAGCAGCAGGCTCAGGGGAAGTaGACCGAGGGTGAGGTGGACAGGCTGGGAGCAAAG +
Preference number: 6 (lower is better)
Translates to: SGLKRQQQAQGK*TEGEVDRLGAK
Trigger: CTTTGCTCCCAGCCTGTCCACCTCACCCTCGGTCAACTTCCCCTGAGCCTGCTGCTGTCTCTTGAGCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545406.1
CDS CAA 90 bp GGATCTCACAGTGGGCTCAAGAGACAGCAGCAGGCTCAGGGGAAGTaGACCGAGGGTGAGGTGGACAGGCTGGGAGCAAAGCTGTGGAGT +
Preference number: 6 (lower is better)
Translates to: GSHSGLKRQQQAQGK*TEGEVDRLGAKLWS
Trigger: ACTCCACAGCTTTGCTCCCAGCCTGTCCACCTCACCCTCGGTCAACTTCCCCTGAGCCTGCTGCTGTCTCTTGAGCCCACTGTGAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545406.1
CDS TCA 72 bp TCTGGGACACTGTTGGCTGTACCTGGAAGCTGGGACTaGCTGACTGAGGCCGAAGCAACCATGACAGTGTTT +
Preference number: 6 (lower is better)
Translates to: SGTLLAVPGSWD*LTEAEATMTVF
Trigger: AAACACTGTCATGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGTGTCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000541076.6
ENST00000606320.6
CDS TCA 72 bp ACTGTTGGCTGTACCTGGAAGCTGGGACTGACTGACTaGGGCCGAAGCAACCATGACAGTGTTTTCTTCATC +
Preference number: 6 (lower is better)
Translates to: TVGCTWKLGLTD*GRSNHDSVFFI
Trigger: GATGAAGAAAACACTGTCATGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTCCAGGTACAGCCAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000541076.6
ENST00000606320.6
CDS TCA 72 bp ACATCCTATCCTAATCACAAACCCATACTGTGCCACTaGGCACAGGTGGGGAAGCTTGGCAGAGCTCATGGA +
Preference number: 6 (lower is better)
Translates to: TSYPNHKPILCH*AQVGKLGRAHG
Trigger: TCCATGAGCTCTGCCAAGCTTCCCCACCTGTGCTCAGTGGCACAGTATGGGTTTGTGATTAGGATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541823.1
CDS TCA 72 bp TTCCTTCAGATTCTGCCTAATCCTGGAAGCTGGGACTaGCTGACTGAGGCCGAAGCAACCATGACAGTGTTT +
Preference number: 6 (lower is better)
Translates to: FLQILPNPGSWD*LTEAEATMTVF
Trigger: AAACACTGTCATGGTTGCTTCGGCCTCAGTCAGTCAGTCCCAGCTTCCAGGATTAGGCAGAATCTGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606326.1
CDS TCA 72 bp CACCTGGTCTTGAATTACAGATGGTCTGGTCTTCCCTaGGAAAGAGGATACCCCATTTGTACTAAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: HLVLNYRWSGLP*ERGYPICTKVG
Trigger: CCCCACCTTAGTACAAATGGGGTATCCTCTTTCTCAGGGAAGACCAGACCATCTGTAATTCAAGACCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538169.5
CDS TCA 72 bp AACAGGAAATGCACATATTTACAAGAAAGCAACGCCTaGTCCCATGTCTCCATCCTGCTTCCTCCTCAGTGG +
Preference number: 6 (lower is better)
Translates to: NRKCTYLQESNA*SHVSILLPPQW
Trigger: CCACTGAGGAGGAAGCAGGATGGAGACATGGGATCAGGCGTTGCTTTCTTGTAAATATGTGCATTTCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563178.1
CDS TCA 72 bp AACTGTACCTTGAATTACAGATGGTCTGGTCTTCCCTaGGAAAGAGGATACCCCATTTGTACTAAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: NCTLNYRWSGLP*ERGYPICTKVG
Trigger: CCCCACCTTAGTACAAATGGGGTATCCTCTTTCTCAGGGAAGACCAGACCATCTGTAATTCAAGGTACAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000541076.6
ENST00000541437.5
ENST00000545406.1
ENST00000545556.6
ENST00000606320.6
CDS TCA 72 bp CTTAGACAATATCACAGGATCTTCCAAGGAAGTCAATaGAATGCATTCTGGGACACTGTTGGCTGTACCTGG +
Preference number: 6 (lower is better)
Translates to: LRQYHRIFQGSQ*NAFWDTVGCTW
Trigger: CCAGGTACAGCCAACAGTGTCCCAGAATGCATTTCATTGACTTCCTTGGAAGATCCTGTGATATTGTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000541076.6
ENST00000606320.6
CDS TCA 72 bp ATATCTGAGGGGTCTGATTTAATCTTGTCTGTAAAGTaGTTCGTCCTCCAGGAGAAGGCATCCTGCTTAGTG +
Preference number: 6 (lower is better)
Translates to: ISEGSDLILSVK*FVLQEKASCLV
Trigger: CACTAAGCAGGATGCCTTCTCCTGGAGGACGAATCACTTTACAGACAAGATTAAATCAGACCCCTCAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541603.6
CDS CCA 72 bp TTAGGACTTCAACTGTACCTTGAATTACAGATGGTCTaGTCTTCCCTGAGAAAGAGGATACCCCATTTGTAC +
Preference number: 6 (lower is better)
Translates to: LGLQLYLELQMV*SSLRKRIPHLY
Trigger: GTACAAATGGGGTATCCTCTTTCTCAGGGAAGACCAGACCATCTGTAATTCAAGGTACAGTTGAAGTCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000541076.6
ENST00000541437.5
ENST00000545406.1
ENST00000545556.6
ENST00000606320.6
CDS CAA 90 bp TCTTCCGAGTCATCTAGAGGAAGAAACTGGAGTTGCTTTCTTGGATaGGTACGTTGTAATGTAGACACAGGAACAGTATCGAATTGGACT +
Preference number: 6 (lower is better)
Translates to: SSESSRGRNWSCFLG*VRCNVDTGTVSNWT
Trigger: AGTCCAATTCGATACTGTTCCTGTGTCTACATTACAACGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCCTCTAGATGACTCGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606704.1
CDS TCA 72 bp CGGGCACAAATAGATTTGACTCAGAGATCACGCTTTTaGACCCAAGAGATGTACACATCTAACTCTTACTTG +
Preference number: 6 (lower is better)
Translates to: RAQIDLTQRSRF*TQEMYTSNSYL
Trigger: CAAGTAAGAGTTAGATGTGTACATCTCTTGGGTTCAAAAGCGTGATCTCTGAGTCAAATCTATTTGTGCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS CCA 72 bp TTCCCTGAGAAAGAGGATACCCCATTTGTACTAAGGTaGGGACTACTTCTATCAGTATTTAAGTTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: FPEKEDTPFVLR*GLLLSVFKFSP
Trigger: TGGACTGAACTTAAATACTGATAGAAGTAGTCCCCACCTTAGTACAAATGGGGTATCCTCTTTCTCAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538169.5
ENST00000541076.6
ENST00000541437.5
ENST00000545406.1
ENST00000545556.6
ENST00000606320.6
CDS CAA 72 bp ATGTCTGATTTTTCCAAGAGTCCACCGGAGAAGCTTTaGTGTGTGAGGGATATTTTGGAAATCCAGGTAACT +
Preference number: 6 (lower is better)
Translates to: MSDFSKSPPEKL*CVRDILEIQVT
Trigger: AGTTACCTGGATTTCCAAAATATCCCTCACACACAAAAGCTTCTCCGGTGGACTCTTGGAAAAATCAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000541076.6
ENST00000606320.6
CDS CAA 72 bp TCATCTAGAGGAAGAAACTGGAGTTGCTTTCTTGGATaGGTACGTTGTAATGTAGACACAGGAACAGTATCG +
Preference number: 6 (lower is better)
Translates to: SSRGRNWSCFLG*VRCNVDTGTVS
Trigger: CGATACTGTTCCTGTGTCTACATTACAACGTACCAATCCAAGAAAGCAACTCCAGTTTCTTCCTCTAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606704.1
CDS TCA 72 bp TCTTGCATTAAAGAAGTTAGGACTTCAACTGTACCTTaGATTACAGATGGTCTGGTCTTCCCTGAGAAAGAG +
Preference number: 6 (lower is better)
Translates to: SCIKEVRTSTVP*ITDGLVFPEKE
Trigger: CTCTTTCTCAGGGAAGACCAGACCATCTGTAATTCAAGGTACAGTTGAAGTCCTAACTTCTTTAATGCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000541076.6
ENST00000541437.5
ENST00000545406.1
ENST00000545556.6
ENST00000606320.6
CDS CAA 72 bp ACATCTAACTCTTACTTGGAGTACTTGATTTACGATTaGAAGGTGGTAAAGATGATGATCTCTGTGAGGCCG +
Preference number: 6 (lower is better)
Translates to: TSNSYLEYLIYD*KVVKMMISVRP
Trigger: CGGCCTCACAGAGATCATCATCTTTACCACCTTCAAATCGTAAATCAAGTACTCCAAGTAAGAGTTAGATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS TCA 72 bp TCTTGCATTAAAGAAGTTAGGACTTCAACTGTACCTTaGATTACAGATGGTCTGGTCTTCCCTATCAGTATT +
Preference number: 6 (lower is better)
Translates to: SCIKEVRTSTVP*ITDGLVFPISI
Trigger: AATACTGATAGGGAAGACCAGACCATCTGTAATTCAAGGTACAGTTGAAGTCCTAACTTCTTTAATGCAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535049.5
CDS CCA 72 bp ATCTTCAGAGGCTTCATCATCTACTGGCATTTTCAGTaGCTAACATTCAGAACTGTGAAATATCCTAAACTT +
Preference number: 6 (lower is better)
Translates to: IFRGFIIYWHFQ*LTFRTVKYPKL
Trigger: AAGTTTAGGATATTTCACAGTTCTGAATGTTAGCCACTGAAAATGCCAGTAGATGATGAAGCCTCTGAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000369865.3
ENST00000535049.5
ENST00000537854.5
ENST00000538169.5
ENST00000539639.5
ENST00000541437.5
ENST00000545406.1
ENST00000545556.6
ENST00000606320.6
CDS GCA 72 bp GCAAAATCAGATTTCTCAATTGGTGTCTTCTTACTTTaGTCATTTCCTTGTTTAGATCTTGAACCTCCATCT +
Preference number: 6 (lower is better)
Translates to: AKSDFSIGVFLL*SFPCLDLEPPS
Trigger: AGATGGAGGTTCAAGATCTAAACAAGGAAATGAGCAAAGTAAGAAGACACCAATTGAGAAATCTGATTTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302373.8
ENST00000539024.5
ENST00000539336.2
ENST00000541076.6
ENST00000606320.6
CDS CAA 72 bp CAAGAGATGTACACATCTAACTCTTACTTGGAGTACTaGATTTACGATTTGAAGGTGGTAAAGATGATGATC +
Preference number: 6 (lower is better)
Translates to: QEMYTSNSYLEY*IYDLKVVKMMI
Trigger: GATCATCATCTTTACCACCTTCAAATCGTAAATCAAGTACTCCAAGTAAGAGTTAGATGTGTACATCTCTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606321.1
CDS CAA 72 bp AGAGAATTTTCATCAGATCCTACAGAAGATGAAGTTTaGTGTAAGGTTTTCACCAAGTCAAACTCTTCCATA +
Preference number: 6 (lower is better)
Translates to: REFSSDPTEDEV*CKVFTKSNSSI
Trigger: TATGGAAGAGTTTGACTTGGTGAAAACCTTACACAAAACTTCATCTTCTGTAGGATCTGATGAAAATTCTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000369865.3
ENST00000535049.5
ENST00000537854.5
ENST00000538169.5
ENST00000539639.5
ENST00000541076.6
ENST00000541437.5
ENST00000545406.1
ENST00000545556.6
ENST00000606320.6