Pregenerated sensors for MPC1L (Homo sapiens)
Ensembl gene IDs: ENSG00000238205Ensembl transcript IDs: ENST00000423387.3, ENST00000423387.4
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | GCAGGTTTAAGTCAGATTCGCACTGTTTTAGAGTCAAAACCGAGGTCTTCATTGTGTGACCTGCAGAGATaGGATCAGGCCCTCTCAGTT | + |
Preference number: 2 (lower is better) Translates to: AGLSQIRTVLESKPRSSLCDLQR*DQALSV Trigger: AACTGAGAGGGCCTGATCTCATCTCTGCAGGTCACA...CAATGAAGACCTCGGTTTTGACTCTAAAACAGTGCGAATCTGACTTAAACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423387.3 |
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3UTR-3UTR TCA 90 bp | AACTGCAGGTTTAAGTCAGATTCGCACTGTTTTAGAGTCAAAACCGAGGTCTTCGCAGTTCAGTGCTTGTaGCCTGCAGAGATGAGATCA | + |
Preference number: 2 (lower is better) Translates to: NCRFKSDSHCFRVKTEVFAVQCL*PAEMRS Trigger: TGATCTCATCTCTGCAGGTCACAAGCACTGAACTGC...GAAGACCTCGGTTTTGACTCTAAAACAGTGCGAATCTGACTTAAACCTGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423387.3 |
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CDS CCA 90 bp | CAACGAAATAGAGCGCAAAGCCGAGTACCCGCAGCCGACCCTGACTaGGCACACGCTCGCGACCTCGAGCCTTCGCGTGGCTGCCACAAA | + |
Preference number: 5 (lower is better) Translates to: QRNRAQSRVPAADPD*AHARDLEPSRGCHK Trigger: TTTGTGGCAGCCACGCGAAGGCTCGAGGTCGCGAGCGTGTGCCCAGTCAGGGTCGGCTGCGGGTACTCGGCTTTGCGCTCTATTTCGTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS TCA 90 bp | AAGGCAGCCAGCGGAAGGCCCCAGCTGAACGCGGGACCCCAGAAGTaGGTGCTGCTCACGTATTCCCGGAACTCCTTGCTCTGGAAGTTA | + |
Preference number: 5 (lower is better) Translates to: KAASGRPQLNAGPQK*VLLTYSRNSLLWKL Trigger: TAACTTCCAGAGCAAGGAGTTCCGGGAATACGTGAGCAGCACTCACTTCTGGGGTCCCGCGTTCAGCTGGGGCCTTCCGCTGGCTGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS CCA 90 bp | AGTAGAGTAGGTAGCGACTGGCCTGCACACTCTGCGCCATCACGTTaGTACAGTGGCACGCCATCAGCAGCAGGTTTCGAGGCTGTACGC | + |
Preference number: 5 (lower is better) Translates to: SRVGSDWPAHSAPSR*YSGTPSAAGFEAVR Trigger: GCGTACAGCCTCGAAACCTGCTGCTGATGGCGTGCCACTGTACCAACGTGATGGCGCAGAGTGTGCAGGCCAGTCGCTACCTACTCTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS GCA 90 bp | CGGGACCCCAGAAGTGAGTGCTGCTCACGTATTCCCGGAACTCCTTaGTCTGGAAGTTATCTCTCATCTTCCGCCACAGTACCGCCATCC | + |
Preference number: 5 (lower is better) Translates to: RDPRSECCSRIPGTP*SGSYLSSSATVPPS Trigger: GGATGGCGGTACTGTGGCGGAAGATGAGAGATAACTTCCAGAGCAAGGAGTTCCGGGAATACGTGAGCAGCACTCACTTCTGGGGTCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS TCA 90 bp | GGAAGTTATCTCTCATCTTCCGCCACAGTACCGCCATCCTCGCCATaGTGGAATAGCCGTAGGCGTGCCTACGGATCAACAGCCAGACCA | + |
Preference number: 5 (lower is better) Translates to: GSYLSSSATVPPSSP*WNSRRRAYGSTARP Trigger: TGGTCTGGCTGTTGATCCGTAGGCACGCCTACGGCTATTCCATCATGGCGAGGATGGCGGTACTGTGGCGGAAGATGAGAGATAACTTCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS CCA 72 bp | AGAGCGCAAAGCCGAGTACCCGCAGCCGACCCTGACTaGGCACACGCTCGCGACCTCGAGCCTTCGCGTGGC | + |
Preference number: 6 (lower is better) Translates to: RAQSRVPAADPD*AHARDLEPSRG Trigger: GCCACGCGAAGGCTCGAGGTCGCGAGCGTGTGCCCAGTCAGGGTCGGCTGCGGGTACTCGGCTTTGCGCTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS CAA 90 bp | GTGACCTGCAGAGATGAGATCAGGCCCTCTCAGTTCTTAAGAAGCTaGTTTCGGGGGCTGGGAACCCGGGCTGGTGGCAGCGGCGGCGGT | + |
Preference number: 6 (lower is better) Translates to: VTCRDEIRPSQFLRS*FRGLGTRAGGSGGG Trigger: ACCGCCGCCGCTGCCACCAGCCCGGGTTCCCAGCCCCCGAAACAAGCTTCTTAAGAACTGAGAGGGCCTGATCTCATCTCTGCAGGTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS TCA 72 bp | AGCGGAAGGCCCCAGCTGAACGCGGGACCCCAGAAGTaGGTGCTGCTCACGTATTCCCGGAACTCCTTGCTC | + |
Preference number: 6 (lower is better) Translates to: SGRPQLNAGPQK*VLLTYSRNSLL Trigger: GAGCAAGGAGTTCCGGGAATACGTGAGCAGCACTCACTTCTGGGGTCCCGCGTTCAGCTGGGGCCTTCCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS CCA 72 bp | CGCCGCCGCCGCCGTAGTAGTAGAGTAGGTAGCGACTaGCCTGCACACTCTGCGCCATCACGTTGGTACAGT | + |
Preference number: 6 (lower is better) Translates to: RRRRRSSRVGSD*PAHSAPSRWYS Trigger: ACTGTACCAACGTGATGGCGCAGAGTGTGCAGGCCAGTCGCTACCTACTCTACTACTACGGCGGCGGCGGCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS CCA 72 bp | CTGGCCTGCACACTCTGCGCCATCACGTTGGTACAGTaGCACGCCATCAGCAGCAGGTTTCGAGGCTGTACG | + |
Preference number: 6 (lower is better) Translates to: LACTLCAITLVQ*HAISSRFRGCT Trigger: CGTACAGCCTCGAAACCTGCTGCTGATGGCGTGCCACTGTACCAACGTGATGGCGCAGAGTGTGCAGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS CCA 72 bp | GGTAGCGACTGGCCTGCACACTCTGCGCCATCACGTTaGTACAGTGGCACGCCATCAGCAGCAGGTTTCGAG | + |
Preference number: 6 (lower is better) Translates to: GSDWPAHSAPSR*YSGTPSAAGFE Trigger: CTCGAAACCTGCTGCTGATGGCGTGCCACTGTACCAACGTGATGGCGCAGAGTGTGCAGGCCAGTCGCTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS CAA 72 bp | AGAGATGAGATCAGGCCCTCTCAGTTCTTAAGAAGCTaGTTTCGGGGGCTGGGAACCCGGGCTGGTGGCAGC | + |
Preference number: 6 (lower is better) Translates to: RDEIRPSQFLRS*FRGLGTRAGGS Trigger: GCTGCCACCAGCCCGGGTTCCCAGCCCCCGAAACAAGCTTCTTAAGAACTGAGAGGGCCTGATCTCATCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS TCA 72 bp | CTCTCATCTTCCGCCACAGTACCGCCATCCTCGCCATaGTGGAATAGCCGTAGGCGTGCCTACGGATCAACA | + |
Preference number: 6 (lower is better) Translates to: LSSSATVPPSSP*WNSRRRAYGST Trigger: TGTTGATCCGTAGGCACGCCTACGGCTATTCCATCATGGCGAGGATGGCGGTACTGTGGCGGAAGATGAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS GCA 72 bp | AGAAGTGAGTGCTGCTCACGTATTCCCGGAACTCCTTaGTCTGGAAGTTATCTCTCATCTTCCGCCACAGTA | + |
Preference number: 6 (lower is better) Translates to: RSECCSRIPGTP*SGSYLSSSATV Trigger: TACTGTGGCGGAAGATGAGAGATAACTTCCAGAGCAAGGAGTTCCGGGAATACGTGAGCAGCACTCACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423387.4 |
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CDS TCA 72 bp | GAGGAATGGCAGTTCAGTGCTTGTGACCTGCAGAGATaGGATCAGGCCCTCTCAGTTCTTAAGAAGCTTGTT | + |
Preference number: 6 (lower is better) Translates to: EEWQFSACDLQR*DQALSVLKKLV Trigger: AACAAGCTTCTTAAGAACTGAGAGGGCCTGATCTCATCTCTGCAGGTCACAAGCACTGAACTGCCATTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423387.4 |