RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MPC1L (Homo sapiens)

Ensembl gene IDs: ENSG00000238205

Ensembl transcript IDs: ENST00000423387.3, ENST00000423387.4

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GCAGGTTTAAGTCAGATTCGCACTGTTTTAGAGTCAAAACCGAGGTCTTCATTGTGTGACCTGCAGAGATaGGATCAGGCCCTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: AGLSQIRTVLESKPRSSLCDLQR*DQALSV
Trigger: AACTGAGAGGGCCTGATCTCATCTCTGCAGGTCACA...CAATGAAGACCTCGGTTTTGACTCTAAAACAGTGCGAATCTGACTTAAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423387.3
3UTR-3UTR TCA 90 bp AACTGCAGGTTTAAGTCAGATTCGCACTGTTTTAGAGTCAAAACCGAGGTCTTCGCAGTTCAGTGCTTGTaGCCTGCAGAGATGAGATCA +
Preference number: 2 (lower is better)
Translates to: NCRFKSDSHCFRVKTEVFAVQCL*PAEMRS
Trigger: TGATCTCATCTCTGCAGGTCACAAGCACTGAACTGC...GAAGACCTCGGTTTTGACTCTAAAACAGTGCGAATCTGACTTAAACCTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423387.3
CDS CCA 90 bp CAACGAAATAGAGCGCAAAGCCGAGTACCCGCAGCCGACCCTGACTaGGCACACGCTCGCGACCTCGAGCCTTCGCGTGGCTGCCACAAA +
Preference number: 5 (lower is better)
Translates to: QRNRAQSRVPAADPD*AHARDLEPSRGCHK
Trigger: TTTGTGGCAGCCACGCGAAGGCTCGAGGTCGCGAGCGTGTGCCCAGTCAGGGTCGGCTGCGGGTACTCGGCTTTGCGCTCTATTTCGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS TCA 90 bp AAGGCAGCCAGCGGAAGGCCCCAGCTGAACGCGGGACCCCAGAAGTaGGTGCTGCTCACGTATTCCCGGAACTCCTTGCTCTGGAAGTTA +
Preference number: 5 (lower is better)
Translates to: KAASGRPQLNAGPQK*VLLTYSRNSLLWKL
Trigger: TAACTTCCAGAGCAAGGAGTTCCGGGAATACGTGAGCAGCACTCACTTCTGGGGTCCCGCGTTCAGCTGGGGCCTTCCGCTGGCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS CCA 90 bp AGTAGAGTAGGTAGCGACTGGCCTGCACACTCTGCGCCATCACGTTaGTACAGTGGCACGCCATCAGCAGCAGGTTTCGAGGCTGTACGC +
Preference number: 5 (lower is better)
Translates to: SRVGSDWPAHSAPSR*YSGTPSAAGFEAVR
Trigger: GCGTACAGCCTCGAAACCTGCTGCTGATGGCGTGCCACTGTACCAACGTGATGGCGCAGAGTGTGCAGGCCAGTCGCTACCTACTCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS GCA 90 bp CGGGACCCCAGAAGTGAGTGCTGCTCACGTATTCCCGGAACTCCTTaGTCTGGAAGTTATCTCTCATCTTCCGCCACAGTACCGCCATCC +
Preference number: 5 (lower is better)
Translates to: RDPRSECCSRIPGTP*SGSYLSSSATVPPS
Trigger: GGATGGCGGTACTGTGGCGGAAGATGAGAGATAACTTCCAGAGCAAGGAGTTCCGGGAATACGTGAGCAGCACTCACTTCTGGGGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS TCA 90 bp GGAAGTTATCTCTCATCTTCCGCCACAGTACCGCCATCCTCGCCATaGTGGAATAGCCGTAGGCGTGCCTACGGATCAACAGCCAGACCA +
Preference number: 5 (lower is better)
Translates to: GSYLSSSATVPPSSP*WNSRRRAYGSTARP
Trigger: TGGTCTGGCTGTTGATCCGTAGGCACGCCTACGGCTATTCCATCATGGCGAGGATGGCGGTACTGTGGCGGAAGATGAGAGATAACTTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS CCA 72 bp AGAGCGCAAAGCCGAGTACCCGCAGCCGACCCTGACTaGGCACACGCTCGCGACCTCGAGCCTTCGCGTGGC +
Preference number: 6 (lower is better)
Translates to: RAQSRVPAADPD*AHARDLEPSRG
Trigger: GCCACGCGAAGGCTCGAGGTCGCGAGCGTGTGCCCAGTCAGGGTCGGCTGCGGGTACTCGGCTTTGCGCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS CAA 90 bp GTGACCTGCAGAGATGAGATCAGGCCCTCTCAGTTCTTAAGAAGCTaGTTTCGGGGGCTGGGAACCCGGGCTGGTGGCAGCGGCGGCGGT +
Preference number: 6 (lower is better)
Translates to: VTCRDEIRPSQFLRS*FRGLGTRAGGSGGG
Trigger: ACCGCCGCCGCTGCCACCAGCCCGGGTTCCCAGCCCCCGAAACAAGCTTCTTAAGAACTGAGAGGGCCTGATCTCATCTCTGCAGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS TCA 72 bp AGCGGAAGGCCCCAGCTGAACGCGGGACCCCAGAAGTaGGTGCTGCTCACGTATTCCCGGAACTCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: SGRPQLNAGPQK*VLLTYSRNSLL
Trigger: GAGCAAGGAGTTCCGGGAATACGTGAGCAGCACTCACTTCTGGGGTCCCGCGTTCAGCTGGGGCCTTCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS CCA 72 bp CGCCGCCGCCGCCGTAGTAGTAGAGTAGGTAGCGACTaGCCTGCACACTCTGCGCCATCACGTTGGTACAGT +
Preference number: 6 (lower is better)
Translates to: RRRRRSSRVGSD*PAHSAPSRWYS
Trigger: ACTGTACCAACGTGATGGCGCAGAGTGTGCAGGCCAGTCGCTACCTACTCTACTACTACGGCGGCGGCGGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS CCA 72 bp CTGGCCTGCACACTCTGCGCCATCACGTTGGTACAGTaGCACGCCATCAGCAGCAGGTTTCGAGGCTGTACG +
Preference number: 6 (lower is better)
Translates to: LACTLCAITLVQ*HAISSRFRGCT
Trigger: CGTACAGCCTCGAAACCTGCTGCTGATGGCGTGCCACTGTACCAACGTGATGGCGCAGAGTGTGCAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS CCA 72 bp GGTAGCGACTGGCCTGCACACTCTGCGCCATCACGTTaGTACAGTGGCACGCCATCAGCAGCAGGTTTCGAG +
Preference number: 6 (lower is better)
Translates to: GSDWPAHSAPSR*YSGTPSAAGFE
Trigger: CTCGAAACCTGCTGCTGATGGCGTGCCACTGTACCAACGTGATGGCGCAGAGTGTGCAGGCCAGTCGCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS CAA 72 bp AGAGATGAGATCAGGCCCTCTCAGTTCTTAAGAAGCTaGTTTCGGGGGCTGGGAACCCGGGCTGGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: RDEIRPSQFLRS*FRGLGTRAGGS
Trigger: GCTGCCACCAGCCCGGGTTCCCAGCCCCCGAAACAAGCTTCTTAAGAACTGAGAGGGCCTGATCTCATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS TCA 72 bp CTCTCATCTTCCGCCACAGTACCGCCATCCTCGCCATaGTGGAATAGCCGTAGGCGTGCCTACGGATCAACA +
Preference number: 6 (lower is better)
Translates to: LSSSATVPPSSP*WNSRRRAYGST
Trigger: TGTTGATCCGTAGGCACGCCTACGGCTATTCCATCATGGCGAGGATGGCGGTACTGTGGCGGAAGATGAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS GCA 72 bp AGAAGTGAGTGCTGCTCACGTATTCCCGGAACTCCTTaGTCTGGAAGTTATCTCTCATCTTCCGCCACAGTA +
Preference number: 6 (lower is better)
Translates to: RSECCSRIPGTP*SGSYLSSSATV
Trigger: TACTGTGGCGGAAGATGAGAGATAACTTCCAGAGCAAGGAGTTCCGGGAATACGTGAGCAGCACTCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423387.4
CDS TCA 72 bp GAGGAATGGCAGTTCAGTGCTTGTGACCTGCAGAGATaGGATCAGGCCCTCTCAGTTCTTAAGAAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: EEWQFSACDLQR*DQALSVLKKLV
Trigger: AACAAGCTTCTTAAGAACTGAGAGGGCCTGATCTCATCTCTGCAGGTCACAAGCACTGAACTGCCATTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423387.4