RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MOSPD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000101928

Ensembl transcript IDs: ENST00000370777.1, ENST00000370779.8, ENST00000370783.8, ENST00000462060.1, ENST00000480721.5, ENST00000489890.1, ENST00000491609.5

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TACACACACACATGTGCACTTGCACACACGTGCACACACAGGACTTaGGATGGAGAAACAAGAATAGCCTCCACACATCATTTTTACAAA +
Preference number: 1 (lower is better)
Translates to: YTHTCALAHTCTHRT*DGETRIASTHHFYK
Trigger: TTTGTAAAAATGATGTGTGGAGGCTATTCTTGTTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR CCA 90 bp ACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATaGAGAAACAAGAATAGCCTCCACACATCATTTTTACAAAGTTCA +
Preference number: 1 (lower is better)
Translates to: THMCTCTHVHTQDLR*RNKNSLHTSFLQSS
Trigger: TGAACTTTGTAAAAATGATGTGTGGAGGCTATTCTTGTTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR GCA 90 bp ATTTCTGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTaGACACACGTGCACACACAGGACTTGAGATGGAGAAACAAGAAT +
Preference number: 1 (lower is better)
Translates to: ISVLYNVLLHTHMCT*THVHTQDLRWRNKN
Trigger: ATTCTTGTTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR GCA 90 bp AAAGTAATTTCTGTTCTTTACAATGTGTTATTACACACACACATGTaGACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAAC +
Preference number: 1 (lower is better)
Translates to: KVISVLYNVLLHTHM*TCTHVHTQDLRWRN
Trigger: GTTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACAGAAATTACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR-3UTR CCA 90 bp CACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAAAGTGAGGATTTCCTATaGAAGACTAGACATAGAAGT +
Preference number: 2 (lower is better)
Translates to: HTHVHLHTRAHTGLEMEKSEDFL*KTRHRS
Trigger: ACTTCTATGTCTAGTCTTCCATAGGAAATCCTCACT...TTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR-3UTR TCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCAATGTCCTCTCTTCTGTaGGACCCTAGGATAAGCATG +
Preference number: 2 (lower is better)
Translates to: CSLQCVITHTHVHLHTRAMSSLL*DPRISM
Trigger: CATGCTTATCCTAGGGTCTCACAGAAGAGAGGACAT...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR-3UTR GCA 90 bp CACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAAACTTTATGCTTTGTTTaGCCTCTACACATTAATGGT +
Preference number: 2 (lower is better)
Translates to: HTHVHLHTRAHTGLEMEKTLCFV*PLHING
Trigger: ACCATTAATGTGTAGAGGGCAAACAAAGCATAAAGT...TTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR-3UTR CCA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTAACCCCTATGATTCTTaGTGTCTGGACCACAACCTG +
Preference number: 2 (lower is better)
Translates to: KALTRGKARVNQLIKQMPNPYDS*CLDHNL
Trigger: CAGGTTGTGGTCCAGACACCAAGAATCATAGGGGTT...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR-3UTR TCA 90 bp CACAAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGACTTCGAAGCATACATaGCCCCTAGCAATCAAAGTG +
Preference number: 2 (lower is better)
Translates to: HKALTRGKARVNQLIKQMTSKHT*PLAIKV
Trigger: CACTTTGATTGCTAGGGGTCATGTATGCTTCGAAGT...CATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR-3UTR GCA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTTTAGGCCGGTCAGTTTaGTCTTTTAGTCCTGTAACT +
Preference number: 2 (lower is better)
Translates to: KALTRGKARVNQLIKQMPLGRSV*SFSPVT
Trigger: AGTTACAGGACTAAAAGAGCAAACTGACCGGCCTAA...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR-3UTR CCA 90 bp CACAAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGATGATTCTTGGTGTCTaGACCACAACCTGTTCTGTA +
Preference number: 2 (lower is better)
Translates to: HKALTRGKARVNQLIKQMMILGV*TTTCSV
Trigger: TACAGAACAGGTTGTGGTCCAGACACCAAGAATCAT...CATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR CAA 90 bp AATTTCTGTTCTTTACAATGTGTTATTACACACACACATGTGCACTaGCACACACGTGCACACACAGGACTTGAGATGGAGAAACAAGAA +
Preference number: 2 (lower is better)
Translates to: NFCSLQCVITHTHVH*HTRAHTGLEMEKQE
Trigger: TTCTTGTTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACAGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR-3UTR GCA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTTCCCTTAGTACTTTATaGTTTGTTTGCCCTCTACAC +
Preference number: 2 (lower is better)
Translates to: KALTRGKARVNQLIKQMPSLSTL*FVCPLH
Trigger: GTGTAGAGGGCAAACAAAGCATAAAGTACTAAGGGA...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR-3UTR TCA 90 bp CACAAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGTGCATGTTAATGGAGTaGAATAGAGATAAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: HKALTRGKARVNQLIKQMCMLME*NRDKRQ
Trigger: CTGCCTTTTATCTCTATTTCACTCCATTAACATGCA...CATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR GCA 72 bp CTTTACAATGTGTTATTACACACACACATGTGCACTTaGACACACGTGCACACACAGGACTTGAGATGGAGA +
Preference number: 3 (lower is better)
Translates to: LYNVLLHTHMCT*THVHTQDLRWR
Trigger: TCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR GCA 72 bp TCTGTTCTTTACAATGTGTTATTACACACACACATGTaGACTTGCACACACGTGCACACACAGGACTTGAGA +
Preference number: 3 (lower is better)
Translates to: SVLYNVLLHTHM*TCTHVHTQDLR
Trigger: TCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp CACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAATCCTCGGAAAGCAGCTaGGACTGCTCCTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: HTHVHLHTRAHTGLEMEKSSESS*DCSSAP
Trigger: AGGAGCGGAGGAGCAGTCGCAGCTGCTTTCCGAGGA...TTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR TCA 90 bp CACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAACATCTGCATAAAATATaGGCTCCGTGGGGAACACGA +
Preference number: 4 (lower is better)
Translates to: HTHVHLHTRAHTGLEMEKHLHKI*APWGTR
Trigger: TCGTGTTCCCCACGGAGCTCATATTTTATGCAGATG...TTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CCA 90 bp CACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAAAACCCCTATGATTCTTaGTGTCTGGACCACAACCTG +
Preference number: 4 (lower is better)
Translates to: HTHVHLHTRAHTGLEMEKNPYDS*CLDHNL
Trigger: CAGGTTGTGGTCCAGACACCAAGAATCATAGGGGTT...TTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCAAGGCAGCATCAGGGCTaGAATGCACACCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRARQHQG*NAHHSQ
Trigger: CTGGGAGTGGTGTGCATTGCAGCCCTGATGCTGCCT...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp CACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAACTGAATCCCCCTTGCTaGAGTTTCTGTTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: HTHVHLHTRAHTGLEMEKLNPPC*SFCFYS
Trigger: ACTGTAAAAACAGAAACTGCAGCAAGGGGGATTCAG...TTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTGCATCAGGGCTGCAATaGACACCACTCCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KALTRGKARVNQLIKQMPASGLQ*TPLPGR
Trigger: TCTTCCTGGGAGTGGTGTGCATTGCAGCCCTGATGC...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCAGAAAGCAGCTGCGACTaGTCCTCCGCTCCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRAESSCD*SSAPLS
Trigger: TGACAAAGGAGCGGAGGAGCAGTCGCAGCTGCTTTC...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CCA 90 bp CACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAAATGATTCTTGGTGTCTaGACCACAACCTGTTCTGTA +
Preference number: 4 (lower is better)
Translates to: HTHVHLHTRAHTGLEMEKMILGV*TTTCSV
Trigger: TACAGAACAGGTTGTGGTCCAGACACCAAGAATCAT...TTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CCA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTCTGGTAATCCCAGTCTaGGTAAGTCAGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KALTRGKARVNQLIKQMPLVIPV*VSQAGR
Trigger: CCTCCCTGCCTGACTTACCCAGACTGGGATTACCAG...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCAGCCTTCCTTTGGCTTTaGTCGGAAACTTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRAAFLWL*SETWRR
Trigger: CCGTCTCCAAGTTTCCGAGCAAAGCCAAAGGAAGGC...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR TCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCATTGATGCATTGGCACTaGATCCCCCTTGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRALMHWH*IPLAAV
Trigger: AACTGCAGCAAGGGGGATTCAGTGCCAATGCATCAA...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR TCA 90 bp CACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAACACTTGCTTATGTGTTaGCTGATCATCTGCATAAAA +
Preference number: 4 (lower is better)
Translates to: HTHVHLHTRAHTGLEMEKHLLMC*LIICIK
Trigger: TTTTATGCAGATGATCAGTCAACACATAAGCAAGTG...TTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR TCA 90 bp CACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAATGCATGTTAATGGAGTaGAATAGAGATAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HTHVHLHTRAHTGLEMEKCMLME*NRDKRQ
Trigger: CTGCCTTTTATCTCTATTTCACTCCATTAACATGCA...TTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCAACACTGAGGCTTTACTaGACCTGCAGCATCAACGAC +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRATLRLY*TCSIND
Trigger: GTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGT...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCACCCAAAGCCTTCCTTTaGCTTTGCTCGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRAPKAFL*LCSETW
Trigger: CCAAGTTTCCGAGCAAAGCCAAAGGAAGGCTTTGGG...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
3UTR CAA 72 bp TCTTTACAATGTGTTATTACACACACACATGTGCACTaGCACACACGTGCACACACAGGACTTGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: SLQCVITHTHVH*HTRAHTGLEME
Trigger: CTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR TCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCAATATCCACACAACACTaGGGCTTTACTGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRAISTQH*GFTAPA
Trigger: TGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATAT...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR TCA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTATGTCCTCTCTTCTGTaGGACCCTAGGATAAGCATG +
Preference number: 4 (lower is better)
Translates to: KALTRGKARVNQLIKQMPMSSLL*DPRISM
Trigger: CATGCTTATCCTAGGGTCTCACAGAAGAGAGGACAT...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CCA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTAACTCCAAAGCATTTTaGCAATCTCGGCAACACCGG +
Preference number: 4 (lower is better)
Translates to: KALTRGKARVNQLIKQMPNSKAF*QSRQHR
Trigger: CCGGTGTTGCCGAGATTGCCAAAATGCTTTGGAGTT...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp CACAAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGGCACTGAATCCCCCTTaGTGCAGTTTCTGTTTTTAC +
Preference number: 4 (lower is better)
Translates to: HKALTRGKARVNQLIKQMALNPP*CSFCFY
Trigger: GTAAAAACAGAAACTGCAGCAAGGGGGATTCAGTGC...CATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTAGGCTTTACTGCACCTaGAGCATCAACGACAACATA +
Preference number: 4 (lower is better)
Translates to: KALTRGKARVNQLIKQMPRLYCT*SINDNI
Trigger: TATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCT...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR TCA 90 bp CACAAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGGATCGAACATCTCGATaGCGAATCACAATATCCACA +
Preference number: 4 (lower is better)
Translates to: HKALTRGKARVNQLIKQMDRTSR*RITIST
Trigger: TGTGGATATTGTGATTCGTCATCGAGATGTTCGATC...CATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR TCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCATTGTTGTTCTTTTGCTaGTGGGAGAAGAGTAGCAAC +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRALLFFC*WEKSSN
Trigger: GTTGCTACTCTTCTCCCATCAGCAAAAGAACAACAA...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR TCA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTCACATGGTTAAACAGTaGGGATTTCCTATGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KALTRGKARVNQLIKQMPHMVKQ*GFPMED
Trigger: GTCTTCCATAGGAAATCCTCACTGTTTAACCATGTG...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCATTAGGCCGGTCAGTTTaGTCTTTTAGTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRALGRSV*SFSPVT
Trigger: AGTTACAGGACTAAAAGAGCAAACTGACCGGCCTAA...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCACTTAGGCTCCTCACATaGTTAAACAGTGAGGATTTC +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRALRLLT*LNSEDF
Trigger: GAAATCCTCACTGTTTAACCATGTGAGGAGCCTAAG...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR GCA 90 bp CACAAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGTCCCTTAGTACTTTATaGTTTGTTTGCCCTCTACAC +
Preference number: 4 (lower is better)
Translates to: HKALTRGKARVNQLIKQMSLSTL*FVCPLH
Trigger: GTGTAGAGGGCAAACAAAGCATAAAGTACTAAGGGA...CATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCACTTTGCTCGGAAACTTaGAGACGGAATTTGTCTATT +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRALCSET*RRNLSI
Trigger: AATAGACAAATTCCGTCTCCAAGTTTCCGAGCAAAG...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CCA 90 bp CACAAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGTACAGCTCTGTTTTCTaGTTGAAACGACTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: HKALTRGKARVNQLIKQMYSSVF*LKRLLK
Trigger: TTTGAGCAGTCGTTTCAACCAGAAAACAGAGCTGTA...CATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CCA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCAAGTGAGGATTTCCTATaGAAGACTAGACATAGAAGT +
Preference number: 4 (lower is better)
Translates to: CSLQCVITHTHVHLHTRASEDFL*KTRHRS
Trigger: ACTTCTATGTCTAGTCTTCCATAGGAAATCCTCACT...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS GCA 90 bp AGCATTTTGGCAATCTCGGCAACACCGGCTTCCTCGGAAAGCAGCTaGGACTGCTCCTCCGCTCCTTTGTCAGCGTCTCTAGGCTGCACT +
Preference number: 5 (lower is better)
Translates to: SILAISATPASSESS*DCSSAPLSASLGCT
Trigger: AGTGCAGCCTAGAGACGCTGACAAAGGAGCGGAGGAGCAGTCGCAGCTGCTTTCCGAGGAAGCCGGTGTTGCCGAGATTGCCAAAATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CAA 90 bp CACAAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGTGCTCCTCCGCTCCTTaGTCAGCGTCTCTAGGCTGC +
Preference number: 5 (lower is better)
Translates to: HKALTRGKARVNQLIKQMCSSAP*SASLGC
Trigger: GCAGCCTAGAGACGCTGACAAAGGAGCGGAGGAGCA...CATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CAA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCAAGCCTTCCTTTGGCTTaGCTCGGAAACTTGGAGACG +
Preference number: 5 (lower is better)
Translates to: CSLQCVITHTHVHLHTRASLPLA*LGNLET
Trigger: CGTCTCCAAGTTTCCGAGCAAAGCCAAAGGAAGGCT...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CAA 90 bp CACACACATGTGCACTTGCACACACGTGCACACACAGGACTTGAGATGGAGAAAACACTTGCTTATGTGTaGACTGATCATCTGCATAAA +
Preference number: 5 (lower is better)
Translates to: HTHVHLHTRAHTGLEMEKTLAYV*TDHLHK
Trigger: TTTATGCAGATGATCAGTCAACACATAAGCAAGTGT...TTTCTCCATCTCAAGTCCTGTGTGTGCACGTGTGTGCAAGTGCACATGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CAA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCATCCCAAAGCCTTCCTTaGGCTTTGCTCGGAAACTTG +
Preference number: 5 (lower is better)
Translates to: CSLQCVITHTHVHLHTRASQSLP*ALLGNL
Trigger: CAAGTTTCCGAGCAAAGCCAAAGGAAGGCTTTGGGA...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS TCA 90 bp GGCAAACTCATAGGGATTGTACAGTGTCAACACTTGCTTATGTGTTaGCTGATCATCTGCATAAAATATGAGCTCCGTGGGGAACACGAA +
Preference number: 5 (lower is better)
Translates to: GKLIGIVQCQHLLMC*LIICIKYELRGEHE
Trigger: TTCGTGTTCCCCACGGAGCTCATATTTTATGCAGATGATCAGTCAACACATAAGCAAGTGTTGACACTGTACAATCCCTATGAGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000370777.1
ENST00000370779.8
ENST00000370783.8
ENST00000462060.1
ENST00000480721.5
ENST00000489890.1
ENST00000491609.5
CDS-3UTR CAA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTAAACTCCAAAGCATTTaGGCAATCTCGGCAACACCG +
Preference number: 5 (lower is better)
Translates to: KALTRGKARVNQLIKQMPKLQSI*AISATP
Trigger: CGGTGTTGCCGAGATTGCCAAAATGCTTTGGAGTTT...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS-3UTR CAA 90 bp TGTTCTTTACAATGTGTTATTACACACACACATGTGCACTTGCACACACGTGCAGGCACTGAATCCCCCTaGCTGCAGTTTCTGTTTTTA +
Preference number: 5 (lower is better)
Translates to: CSLQCVITHTHVHLHTRAGTESP*LQFLFL
Trigger: TAAAAACAGAAACTGCAGCAAGGGGGATTCAGTGCC...TGCACGTGTGTGCAAGTGCACATGTGTGTGTGTAATAACACATTGTAAAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS GCA 90 bp ATCTCGATGACGAATCACAATATCCACACAACACTGAGGCTTTACTaGACCTGCAGCATCAACGACAACATACTTATTTGGAGTAGTACA +
Preference number: 5 (lower is better)
Translates to: ISMTNHNIHTTLRLY*TCSINDNILIWSST
Trigger: TGTACTACTCCAAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATTGTGATTCGTCATCGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370777.1
ENST00000370779.8
ENST00000370783.8
ENST00000489890.1
CDS-3UTR CAA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTGCTTTGCTCGGAAACTaGGAGACGGAATTTGTCTAT +
Preference number: 5 (lower is better)
Translates to: KALTRGKARVNQLIKQMPALLGN*ETEFVY
Trigger: ATAGACAAATTCCGTCTCCAAGTTTCCGAGCAAAGC...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS TCA 90 bp ACGTGTTACCAGGAATTGATCTTGACTTACATATCCACACAACACTaGGGCTTTACTGCACCTGCAGCATCAACGACAACATACTTATTT +
Preference number: 5 (lower is better)
Translates to: TCYQELILTYISTQH*GFTAPAASTTTYLF
Trigger: AAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATGTAAGTCAAGATCAATTCCTGGTAACACGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462060.1
CDS GCA 90 bp ATGACGAATCACAATATCCACACAACACTGAGGCTTTACTGCACCTaGAGCATCAACGACAACATACTTATTTGGAGTAGTACACAAAAC +
Preference number: 5 (lower is better)
Translates to: MTNHNIHTTLRLYCT*SINDNILIWSSTQN
Trigger: GTTTTGTGTACTACTCCAAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATTGTGATTCGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370777.1
ENST00000370779.8
ENST00000370783.8
ENST00000489890.1
CDS GCA 90 bp GATCTTGACTTACATATCCACACAACACTGAGGCTTTACTGCACCTaGAGCATCAACGACAACATACTTATTTGGAGTAGTACACAAAAC +
Preference number: 5 (lower is better)
Translates to: DLDLHIHTTLRLYCT*SINDNILIWSSTQN
Trigger: GTTTTGTGTACTACTCCAAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATGTAAGTCAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462060.1
CDS GCA 90 bp GGAATTGATCTTGACTTACATATCCACACAACACTGAGGCTTTACTaGACCTGCAGCATCAACGACAACATACTTATTTGGAGTAGTACA +
Preference number: 5 (lower is better)
Translates to: GIDLDLHIHTTLRLY*TCSINDNILIWSST
Trigger: TGTACTACTCCAAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATGTAAGTCAAGATCAATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462060.1
CDS-3UTR CAA 90 bp AAAGCATTAACCAGAGGTAAAGCCAGGGTGAACCAACTAATTAAACAGATGCCTTACTTCAGAAGTCAATaGAAATCCTTGCTCATGTTC +
Preference number: 5 (lower is better)
Translates to: KALTRGKARVNQLIKQMPYFRSQ*KSLLMF
Trigger: GAACATGAGCAAGGATTTCAATTGACTTCTGAAGTA...AGGCATCTGTTTAATTAGTTGGTTCACCCTGGCTTTACCTCTGGTTAATGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS GCA 72 bp TCGGCAACACCGGCTTCCTCGGAAAGCAGCTGCGACTaGTCCTCCGCTCCTTTGTCAGCGTCTCTAGGCTGC +
Preference number: 6 (lower is better)
Translates to: SATPASSESSCD*SSAPLSASLGC
Trigger: GCAGCCTAGAGACGCTGACAAAGGAGCGGAGGAGCAGTCGCAGCTGCTTTCCGAGGAAGCCGGTGTTGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS GCA 72 bp GCAATCTCGGCAACACCGGCTTCCTCGGAAAGCAGCTaGGACTGCTCCTCCGCTCCTTTGTCAGCGTCTCTA +
Preference number: 6 (lower is better)
Translates to: AISATPASSESS*DCSSAPLSASL
Trigger: TAGAGACGCTGACAAAGGAGCGGAGGAGCAGTCGCAGCTGCTTTCCGAGGAAGCCGGTGTTGCCGAGATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370783.8
CDS CAA 90 bp TGGGAGAAGAGTAGCAACAACCTCTTTTCTTCCCAAAGCCTTCCTTaGGCTTTGCTCGGAAACTTGGAGACGGAATTTGTCTATTACACC +
Preference number: 6 (lower is better)
Translates to: WEKSSNNLFSSQSLP*ALLGNLETEFVYYT
Trigger: GGTGTAATAGACAAATTCCGTCTCCAAGTTTCCGAGCAAAGCCAAAGGAAGGCTTTGGGAAGAAAAGAGGTTGTTGCTACTCTTCTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370777.1
ENST00000370779.8
ENST00000370783.8
ENST00000480721.5
ENST00000489890.1
ENST00000491609.5
CDS CAA 72 bp AGTAGCAACAACCTCTTTTCTTCCCAAAGCCTTCCTTaGGCTTTGCTCGGAAACTTGGAGACGGAATTTGTC +
Preference number: 6 (lower is better)
Translates to: SSNNLFSSQSLP*ALLGNLETEFV
Trigger: GACAAATTCCGTCTCCAAGTTTCCGAGCAAAGCCAAAGGAAGGCTTTGGGAAGAAAAGAGGTTGTTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370777.1
ENST00000370779.8
ENST00000370783.8
ENST00000480721.5
ENST00000489890.1
ENST00000491609.5
CDS TCA 72 bp CAGGAATTGATCTTGACTTACATATCCACACAACACTaGGGCTTTACTGCACCTGCAGCATCAACGACAACA +
Preference number: 6 (lower is better)
Translates to: QELILTYISTQH*GFTAPAASTTT
Trigger: TGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATGTAAGTCAAGATCAATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462060.1
CDS CAA 72 bp TCTTCCCAAAGCCTTCCTTTGGCTTTGCTCGGAAACTaGGAGACGGAATTTGTCTATTACACCATAGTGACA +
Preference number: 6 (lower is better)
Translates to: SSQSLPLALLGN*ETEFVYYTIVT
Trigger: TGTCACTATGGTGTAATAGACAAATTCCGTCTCCAAGTTTCCGAGCAAAGCCAAAGGAAGGCTTTGGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370777.1
ENST00000370779.8
ENST00000370783.8
ENST00000480721.5
ENST00000489890.1
ENST00000491609.5
CDS GCA 72 bp CACAATATCCACACAACACTGAGGCTTTACTGCACCTaGAGCATCAACGACAACATACTTATTTGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: HNIHTTLRLYCT*SINDNILIWSS
Trigger: ACTACTCCAAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370777.1
ENST00000370779.8
ENST00000370783.8
ENST00000489890.1
CDS GCA 72 bp ACGAATCACAATATCCACACAACACTGAGGCTTTACTaGACCTGCAGCATCAACGACAACATACTTATTTGG +
Preference number: 6 (lower is better)
Translates to: TNHNIHTTLRLY*TCSINDNILIW
Trigger: CCAAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATTGTGATTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370777.1
ENST00000370779.8
ENST00000370783.8
ENST00000489890.1
CDS GCA 72 bp CTTGACTTACATATCCACACAACACTGAGGCTTTACTaGACCTGCAGCATCAACGACAACATACTTATTTGG +
Preference number: 6 (lower is better)
Translates to: LDLHIHTTLRLY*TCSINDNILIW
Trigger: CCAAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATGTAAGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462060.1
CDS GCA 72 bp TTACATATCCACACAACACTGAGGCTTTACTGCACCTaGAGCATCAACGACAACATACTTATTTGGAGTAGT +
Preference number: 6 (lower is better)
Translates to: LHIHTTLRLYCT*SINDNILIWSS
Trigger: ACTACTCCAAATAAGTATGTTGTCGTTGATGCTGCAGGTGCAGTAAAGCCTCAGTGTTGTGTGGATATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462060.1