RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MORC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000133131

Ensembl transcript IDs: ENST00000255495.7, ENST00000355610.9, ENST00000478924.1, ENST00000604604.1

Found 362 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTCAATCCAGTATGTaGTTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCT +
Preference number: 1 (lower is better)
Translates to: IREEKGIQSGAQSSM*FASSTVYRIPSTCS
Trigger: AGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCACCAGACTGTATACCCTTCTCTTCTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
3UTR TCA 90 bp GTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTaGGGAATCCCCACACTGACTTCCACAATGGTTGAACTAGTTTAC +
Preference number: 1 (lower is better)
Translates to: VMGWLGQMVFLVLDP*GIPTLTSTMVELVY
Trigger: GTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGGGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR TCA 90 bp AGTTCTAGATCCCTGAGGAATCCCCACACTGACTTCCACAATGGTTaGACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATT +
Preference number: 1 (lower is better)
Translates to: SSRSLRNPHTDFHNG*TSLQSHQQCKSVPI
Trigger: AATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGGGATTCCTCAGGGATCTAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR TCA 90 bp CTTATGTTTCCAACGAGATTGTTACATCTTCGAAGGCTGCAAACATaGGTTGTACTTGTTAGCTTACCCCAAAATAATACCTGGTATACC +
Preference number: 1 (lower is better)
Translates to: LMFPTRLLHLRRLQT*VVLVSLPQNNTWYT
Trigger: GGTATACCAGGTATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACAATCTCGTTGGAAACATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR-3UTR GCA 90 bp TCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCATGTCATATCTTACATCTTCGAAGGCTaGAAACATGAGTTGTACTTG +
Preference number: 2 (lower is better)
Translates to: SGVVPSLNFLPQIFHVISYIFEG*KHELYL
Trigger: CAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTA...AGATATGACATGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR-3UTR TCA 90 bp GTTCCCCTTCGTATGTTCATGTGTTCTCATTGTTCAATTCCCATCTATGAGTCTGAGGAATCCCCACACTaGCTTCCACAATGGTTGAAC +
Preference number: 2 (lower is better)
Translates to: VPLRMFMCSHCSIPIYESEESPH*LPQWLN
Trigger: GTTCAACCATTGTGGAAGTCAGTGTGGGGATTCCTC...AGACTCATAGATGGGAATTGAACAATGAGAACACATGAACATACGAAGGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR-3UTR TCA 90 bp TGTATACATGTGCCATGCTGGTCTGCTGCACCCATTAACGCGTCATTTAGCATTAATCCAGTCTATCATTaGTGGACATTTGGCTTGGTT +
Preference number: 2 (lower is better)
Translates to: CIHVPCWSAAPINASFSINPVYH*WTFGLV
Trigger: AACCAAGCCAAATGTCCATCAATGATAGACTGGATT...AATGCTAAATGACGCGTTAATGGGTGCAGCAGACCAGCATGGCACATGTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR-3UTR GCA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTATCCAGTATGTGATTTaGCTCCAGCACCGTGTACAG +
Preference number: 2 (lower is better)
Translates to: RKENRQKIREEKGIQSGAIQYVI*LQHRVQ
Trigger: CTGTACACGGTGCTGGAGGCAAATCACATACTGGAT...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
3UTR-3UTR TCA 90 bp ATGGCTAGCCAGTTTTCCCAGCACCATTTATTAGATAGGGAATCCTTTCCCCATCCCATGAGCATGGAATaGTCTTCCATTTGTTTGTAT +
Preference number: 2 (lower is better)
Translates to: MASQFSQHHLLDRESFPHPMSME*SSICLY
Trigger: ATACAAACAAATGGAAGATCATTCCATGCTCATGGG...ATGGGGAAAGGATTCCCTATCTAATAAATGGTGCTGGGAAAACTGGCTAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR-3UTR TCA 90 bp TGTATACATGTGCCATGCTGGTCTGCTGCACCCATTAACGCGTCATTTAGCATTGTCTTTATAGCAGCATaGTTTATAGTCCCTACAAAG +
Preference number: 2 (lower is better)
Translates to: CIHVPCWSAAPINASFSIVFIAA*FIVPTK
Trigger: CTTTGTAGGGACTATAAATCATGCTGCTATAAAGAC...AATGCTAAATGACGCGTTAATGGGTGCAGCAGACCAGCATGGCACATGTATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR-3UTR CCA 90 bp ACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCGATCGCCATTCTAACTaGTGTGAGATGGCATCTCAT +
Preference number: 2 (lower is better)
Translates to: TSTMVELVYSPTNSVKVFDRHSN*CEMASH
Trigger: ATGAGATGCCATCTCACACCAGTTAGAATGGCGATC...GAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR CAA 90 bp CAACGAGATTGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTaGTTAGCTTACCCCAAAATAATACCTGGTATACCGGACCCAATA +
Preference number: 2 (lower is better)
Translates to: QRDCYIFEGCKHELY*LAYPKIIPGIPDPI
Trigger: TATTGGGTCCGGTATACCAGGTATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACAATCTCGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR CAA 90 bp TGTTTCCAACGAGATTGTTACATCTTCGAAGGCTGCAAACATGAGTaGTACTTGTTAGCTTACCCCAAAATAATACCTGGTATACCGGAC +
Preference number: 2 (lower is better)
Translates to: CFQRDCYIFEGCKHE*YLLAYPKIIPGIPD
Trigger: GTCCGGTATACCAGGTATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACAATCTCGTTGGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR-3UTR TCA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAACACATATCCAGGTCATaGAAATTAAAGCTTTCAGGT +
Preference number: 2 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKHISRS*KLKLSG
Trigger: ACCTGAAAGCTTTAATTTTCATGACCTGGATATGTG...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR CAA 90 bp GAACTTCCTCCCCCAGATCTTCCATGTCATATCTGTACCACTCAGTaGTACATATCATACACTTTTGTGTATAATGTGATGTATGTCTTA +
Preference number: 2 (lower is better)
Translates to: ELPPPDLPCHICTTQ*YISYTFVYNVMYVL
Trigger: TAAGACATACATCACATTATACACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATCTGGGGGAGGAAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR-3UTR CCA 90 bp ATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCTGTTGCCATTGCTTTTaGTGTTTTAGACATGAAGTG +
Preference number: 2 (lower is better)
Translates to: MVELVYSPTNSVKVFLFLCCHCF*CFRHEV
Trigger: CACTTCATGTCTAAAACACCAAAAGCAATGGCAACA...GAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR-3UTR CCA 90 bp GTTCCCCTTCGTATGTTCATGTGTTCTCATTGTTCAATTCCCATCTATGAGTCTCTGTATAGTATTCCATaGTGTATATGTGCCACATTT +
Preference number: 2 (lower is better)
Translates to: VPLRMFMCSHCSIPIYESLYSIP*CICATF
Trigger: AAATGTGGCACATATACACCATGGAATACTATACAG...AGACTCATAGATGGGAATTGAACAATGAGAACACATGAACATACGAAGGGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR-3UTR TCA 90 bp AGAATGATGATTTCCAATTTTATCCATGTCCCTACAAAGGACATGAACTCATCACAGATGAGTAGGTTGTaGAAATTTTCTCCCATTCTG +
Preference number: 2 (lower is better)
Translates to: RMMISNFIHVPTKDMNSSQMSRL*KFSPIL
Trigger: CAGAATGGGAGAAAATTTTCACAACCTACTCATCTG...TGATGAGTTCATGTCCTTTGTAGGGACATGGATAAAATTGGAAATCATCATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR-3UTR CCA 90 bp AGAATGATGATTTCCAATTTTATCCATGTCCCTACAAAGGACATGAACTCATCAGTTCATTGTAAATTCTaGATATTAGCCCTTTGTCAG +
Preference number: 2 (lower is better)
Translates to: RMMISNFIHVPTKDMNSSVHCKF*ILALCQ
Trigger: CTGACAAAGGGCTAATATCCAGAATTTACAATGAAC...TGATGAGTTCATGTCCTTTGTAGGGACATGGATAAAATTGGAAATCATCATTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR-3UTR CAA 90 bp AGGTCCCATTTCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCAGGCTGCAAACATGAGTaGTACTTGTTAGCTTACCCC +
Preference number: 3 (lower is better)
Translates to: RSHFWCGAFLELPPPDLPGCKHE*YLLAYP
Trigger: GGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCC...TGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGAAATGGGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR TCA 72 bp TGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTaGGGAATCCCCACACTGACTTCCACAATGGTTGAA +
Preference number: 3 (lower is better)
Translates to: WLGQMVFLVLDP*GIPTLTSTMVE
Trigger: TTCAACCATTGTGGAAGTCAGTGTGGGGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR TCA 72 bp TATTTCTCCACATCCTCTCCAGCACCTGTTGTTTCCTaGCTTTTTAATGATCGCCATTCTAACTGGTGTGAG +
Preference number: 3 (lower is better)
Translates to: YFSTSSPAPVVS*LFNDRHSNWCE
Trigger: CTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGGATGTGGAGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR TCA 72 bp CCAACGAGATTGTTACATCTTCGAAGGCTGCAAACATaGGTTGTACTTGTTAGCTTACCCCAAAATAATACC +
Preference number: 3 (lower is better)
Translates to: PTRLLHLRRLQT*VVLVSLPQNNT
Trigger: GGTATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACAATCTCGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR CCA 72 bp ATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATaGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCC +
Preference number: 3 (lower is better)
Translates to: IYSPLGIYPVMG*LGQMVFLVLDP
Trigger: GGGATCTAGAACTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR-3UTR CAA 90 bp ACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCATCTCATAGTGGTTTaGATTTGCATTTCTCTGATG +
Preference number: 3 (lower is better)
Translates to: TSTMVELVYSPTNSVKVFHLIVV*ICISLM
Trigger: CATCAGAGAAATGCAAATCAAAACCACTATGAGATG...GAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR TCA 72 bp TATGGCCATTTTCACGATATTGATTCTTCCTACCCATaGGCATGGAATGATCTTCCATTTGTTTGTATCCTC +
Preference number: 3 (lower is better)
Translates to: YGHFHDIDSSYP*AWNDLPFVCIL
Trigger: GAGGATACAAACAAATGGAAGATCATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR GCA 72 bp TTATGTTTCCAACGAGATTGTTACATCTTCGAAGGCTaGAAACATGAGTTGTACTTGTTAGCTTACCCCAAA +
Preference number: 3 (lower is better)
Translates to: LCFQRDCYIFEG*KHELYLLAYPK
Trigger: TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACAATCTCGTTGGAAACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR-3UTR CAA 90 bp AGAATGATGATTTCCAATTTTATCCATGTCCCTACAAAGGACATGAACTCATCACTCTGTTCTGTTCCATaGATCTATATCTCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: RMMISNFIHVPTKDMNSSLCSVP*IYISVL
Trigger: CAAAACAGAGATATAGATCAATGGAACAGAACAGAG...TGATGAGTTCATGTCCTTTGTAGGGACATGGATAAAATTGGAAATCATCATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604604.1
3UTR TCA 72 bp ATAATACCTGGTATACCGGACCCAATATCTGCTGATTaGTCTAACCTAAATGAATACAAACCATTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: IIPGIPDPISAD*SNLNEYKPFQK
Trigger: TTTCTGAAATGGTTTGTATTCATTTAGGTTAGATCAATCAGCAGATATTGGGTCCGGTATACCAGGTATTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCAACGGTACCCGTCTGCTaGCGCCGGACCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPTVPVC*RRTPGP
Trigger: CGGGCCAGGGGTCCGGCGGCAGCAGACGGGTACCGT...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGGCTCCGCGATGGCACTaGAGGGTCGCGTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FASSTVYRIPSTCSESYPAPRWH*RVACGC
Trigger: GCAGCCACACGCGACCCTTCAGTGCCATCGCGGAGC...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp AGGTCCCATTTCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCAGCTCCGCGATGGCACTaGAGGGTCGCGTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RSHFWCGAFLELPPPDLPAPRWH*RVACGC
Trigger: GCAGCCACACGCGACCCTTCAGTGCCATCGCGGAGC...TGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGAAATGGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTACTTCCACTCGCAGCTaGCGGCGACCGTCCGGGACC +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLTSTRS*RRPSGT
Trigger: GGTCCCGGACGGTCGCCGCCAGCTGCGAGTGGAAGT...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AGGTCCCATTTCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCAAGGGACCCCTGGCGTTaGTCTTTGGCCCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: RSHFWCGAFLELPPPDLPRDPWR*SLAPGY
Trigger: GTATCCAGGGGCCAAAGACCAACGCCAGGGGTCCCT...TGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGAAATGGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCAGGAAGCAGGGACCCCTaGCGTTGGTCTTTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPGSRDP*RWSLAP
Trigger: AGGGGCCAAAGACCAACGCCAGGGGTCCCTGCTTCC...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAAGGGGTGAGGCCGGCTaGGGCAAGCGGCGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKRGEAG*GKRRLR
Trigger: GCGGAGCCGCCGCTTGCCTCAGCCGGCCTCACCCCT...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTTGTGGCTGCTGGAGTTaGTCTGGAGGTAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLCGCWS*SGGSGG
Trigger: GCCCCCGCTACCTCCAGAGCAACTCCAGCAGCCACA...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCAGGGTCGCGTGTGGCTaGTGGAGTTGCTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTRVACG*WSCSGG
Trigger: ACCTCCAGAGCAACTCCAGCAGCCACACGCGACCCT...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCGTCGCGTGTGGCTGCTaGAGTTGCTCTGGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTVACGC*SCSGGS
Trigger: GCTACCTCCAGAGCAACTCCAGCAGCCACACGCGAC...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGCTGAAGGGTCGCGTGTaGCTGCTGGAGTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLLKGRV*LLELLW
Trigger: CCAGAGCAACTCCAGCAGCCACACGCGACCCTTCAG...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGGGACCCCTGGCGTTaGTCTTTGGCCCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLRDPWR*SLAPGY
Trigger: GTATCCAGGGGCCAAAGACCAACGCCAGGGGTCCCT...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTGCCACGGTACCCGTCTaGTGCCGCCGGACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RKENRQKIREEKGIQSGAATVPV*CRRTPG
Trigger: GCCAGGGGTCCGGCGGCAGCAGACGGGTACCGTGGC...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGGCTTTGCCAAAGCCCTaGGCCTTCTGCAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLALPKP*AFCSIS
Trigger: GGAAATGCTGCAGAAGGCTCAGGGCTTTGGCAAAGC...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGCCCATCCACTTGTTCTaGGTCATACCCGATCTCACG +
Preference number: 4 (lower is better)
Translates to: FASSTVYRIPSTCSESYPPIHLF*VIPDLT
Trigger: CGTGAGATCGGGTATGACTCAGAACAAGTGGATGGG...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp TATTGCTTTTCTGACCCTAGACTCTTGAAAGCCTATTTAAACTGGCCTCTTTCTACGGTACCCGTCTGCTaGCGCCGGACCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: YCFSDPRLLKAYLNWPLSTVPVC*RRTPGP
Trigger: CGGGCCAGGGGTCCGGCGGCAGCAGACGGGTACCGT...AGAAAGAGGCCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGAAAAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGTGGGTAGGCAACAGGTaGTTCTACCCTCCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: FASSTVYRIPSTCSESYPWVGNR*FYPPVR
Trigger: CCTTACAGGAGGGTAGAAGCACCTGTTGCCTACCCA...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp TTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGATTTCTCCCCAATGGCTaGAGCAGGGATTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPPAPCTGSHPLVLSHTRFLPNG*SRDCSR
Trigger: TCTGCTGCAATCCCTGCTGCAGCCATTGGGGAGAAA...TCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCTCACGAAGCTCCAAGTaGGGGAGGACAGAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTSRSSK*GRTEVR
Trigger: CCTTACTTCTGTCCTCCCTCACTTGGAGCTTCGTGA...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp TCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCATGTCATATCTGTGTGGTGCCTTCCTTaGACTTCCTCCCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: SGVVPSLNFLPQIFHVISVWCLP*TSSPRS
Trigger: AGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACAC...AGATATGACATGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp GATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTGGCCACGGTACCCGTCTaGTGCCGCCGGACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: DLPCHICTTQLYISYTFVATVPV*CRRTPG
Trigger: GCCAGGGGTCCGGCGGCAGCAGACGGGTACCGTGGC...CACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGAGGGATGGCATCAAACTaGGCCAGCAGGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: LPPAPCTGSHPLVLSHTRGMASN*ASRSFS
Trigger: TGAAAATGACCTGCTGGCCCAGTTTGATGCCATCCC...TCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGCCTTCGGTATTGGCCTaGCTACAGTTGAGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: FASSTVYRIPSTCSESYPPSVLA*LQLRSQ
Trigger: TTGAGACCTCAACTGTAGCCAGGCCAATACCGAAGG...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AGGTCCCATTTCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCACCTTCGGTATTGGCCTaGCTACAGTTGAGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: RSHFWCGAFLELPPPDLPPSVLA*LQLRSQ
Trigger: TTGAGACCTCAACTGTAGCCAGGCCAATACCGAAGG...TGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGAAATGGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGCTGTTCTCCCCTTCTaGGTAGGCAACAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLAVLPF*VGNRCF
Trigger: GAAGCACCTGTTGCCTACCCAGAAGGGGAGAACAGC...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTTACCCCCATTCTTGGTaGAGACAAGGGCGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLYPHSW*RQGRPF
Trigger: GAAAGGACGCCCTTGTCTTCACCAAGAATGGGGGTA...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTGAATGGGAGCTCCTaGATCTCTAACACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPLNGSS*ISNTFG
Trigger: GCCAAAGGTGTTAGAGATTCAGGAGCTCCCATTCAG...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGCTCAATCCAGTATGTaGTTTGCCTCCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLAQSSM*FASSTV
Trigger: CACGGTGCTGGAGGCAAATCACATACTGGATTGAGC...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTCTCCTCATAGCCTCTTaGTTTCTCCCCAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLLLIAS*FLPNGC
Trigger: GCAGCCATTGGGGAGAAAGCAAGAGGCTATGAGGAG...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGGGTACAATAACTGCCTaGGCCTGGACACATTCCAGA +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLGTITA*AWTHSR
Trigger: TCTGGAATGTGTCCAGGCCCAGGCAGTTATTGTACC...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTGCTCCCACTCGCAGCTaGCGGAGGCGGAGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSAPTRS*RRRSAL
Trigger: GAGCGCGCTCCGCCTCCGCCAGCTGCGAGTGGGAGC...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATGCATGGAGCCTGACTTaGAACCATTACCAAAGACCC +
Preference number: 4 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHAWSLT*NHYQRP
Trigger: GGGTCTTTGGTAATGGTTTCAAGTCAGGCTCCATGC...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCCTTCCAGTAAGCATTaGGCTTCTGGGCAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVPSSKH*ASGQGH
Trigger: ATGCCCTTGCCCAGAAGCTCAATGCTTACTGGAAGG...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGGAAGAGATGGTGATCTaGTTTCTTCTCCACCAGAAG +
Preference number: 4 (lower is better)
Translates to: FASSTVYRIPSTCSESYPEEMVI*FLLHQK
Trigger: CTTCTGGTGGAGAAGAAAGCAGATCACCATCTCTTC...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp GATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTGACTTCCACTCGCAGCTaGCGGCGACCGTCCGGGACC +
Preference number: 4 (lower is better)
Translates to: DLPCHICTTQLYISYTFVTSTRS*RRPSGT
Trigger: GGTCCCGGACGGTCGCCGCCAGCTGCGAGTGGAAGT...CACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGATACCAAAGACCCCAATaGGACACTGGCTCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LPPAPCTGSHPLVLSHTRYQRPQ*DTGSSL
Trigger: TAAAGAAGAGCCAGTGTCCCATTGGGGTCTTTGGTA...TCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGTGGAATAGTTCAAGATaGCTTCTAGGCTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: FASSTVYRIPSTCSESYPWNSSR*LLGWAM
Trigger: CATTGCCCAGCCTAGAAGCCATCTTGAACTATTCCA...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCGAGTTGGCTTCACCTaGCACCCCACCTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVRVGFT*HPTFSK
Trigger: TTTTGAGAAGGTGGGGTGCCAGGTGAAGCCAACTCG...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AGGTCCCATTTCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCAGTTGTCATCTCATTCTaGAGCCTTCTTCGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSHFWCGAFLELPPPDLPVVISF*SLLRFS
Trigger: GGAGAAACGAAGAAGGCTCCAGAATGAGATGACAAC...TGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGAAATGGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGGCTGTTCTCCCCTTCTaGGTAGGCAACAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGEREREREREAVLPF*VGNRCF
Trigger: GAAGCACCTGTTGCCTACCCAGAAGGGGAGAACAGC...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCAATTCGGTGTAGTTTATaGGGTGTCATCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPIRCSL*GVIPHP
Trigger: TGGATGTGGGATGACACCTCATAAACTACACCGAAT...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATATAGAAGTCCAACAGTaGGAGTACCCCCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHIEVQQ*EYPHSW
Trigger: CCAAGAATGGGGGTACTCTCACTGTTGGACTTCTAT...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGTGCGGATGTTCCAAATaGGAACACGAGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLCGCSK*EHECLF
Trigger: AAAAAGGCACTCGTGTTCTCATTTGGAACATCCGCA...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGTGGCCTGGCTACAGTTaGGGTCTCAAAATTATCTTG +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLWPGYS*GLKIIL
Trigger: CAAGATAATTTTGAGACCTCAACTGTAGCCAGGCCA...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGAGCACACTAGGGCTATaGATTCCCTCATATCCAATT +
Preference number: 4 (lower is better)
Translates to: FASSTVYRIPSTCSESYPSTLGL*IPSYPI
Trigger: AATTGGATATGAGGGAATTCATAGCCCTAGTGTGCT...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGTCCAGAGGCTTAAGTTaGAGAGATGGTGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLSRGLS*RDGDLL
Trigger: AAGCAGATCACCATCTCTTCAACTTAAGCCTCTGGA...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTAATTCAGACTGCCAGTaGTTCCTCTCCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVNSDCQ*FLSCSS
Trigger: GCTGGAACAGGAGAGGAATCACTGGCAGTCTGAATT...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGTCACGAAGCTCCAAGTaGGGGAGGACAGAAGTAAGG +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGERERERERESRSSK*GRTEVR
Trigger: CCTTACTTCTGTCCTCCCTCACTTGGAGCTTCGTGA...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCAATTGGTACAATAACTaGCTGGGCCTGGACACATTC +
Preference number: 4 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTNWYNN*LGLDTF
Trigger: GAATGTGTCCAGGCCCAGGCAGTTATTGTACCAATT...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATATCCAGTATGTGATTTaGCTCCAGCACCGTGTACAG +
Preference number: 4 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHIQYVI*LQHRVQ
Trigger: CTGTACACGGTGCTGGAGGCAAATCACATACTGGAT...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp TTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGAGGGTATACAGTCTGGTaGTCAATCCAGTATGTGATT +
Preference number: 4 (lower is better)
Translates to: LPPAPCTGSHPLVLSHTRGYTVW*SIQYVI
Trigger: AATCACATACTGGATTGAGCACCAGACTGTATACCC...TCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGGTTGAATGGAACAATTaGTACAATAACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FASSTVYRIPSTCSESYPVEWNN*YNNCLG
Trigger: GCCCAGGCAGTTATTGTACCAATTGTTCCATTCAAC...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCGAGTTCTTGTTCCTCTaGAACAGAGCATCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTEFLFL*NRASPV
Trigger: TACAGGAGATGCTCTGTTCCAGAGGAACAAGAACTC...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCAGTTGTCATCTCATTCTaGAGCCTTCTTCGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPVVISF*SLLRFS
Trigger: GGAGAAACGAAGAAGGCTCCAGAATGAGATGACAAC...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATGAACTCGATTTATCATaGCTGTTCTCCCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHELDLS*LFSPSG
Trigger: CCCAGAAGGGGAGAACAGCCATGATAAATCGAGTTC...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCATGTCATATCTCACAGAATAAGGCACTaGGTTCCAGGATTCAACTGC +
Preference number: 4 (lower is better)
Translates to: SGVVPSLNFLPQIFHVISHRIRH*VPGFNC
Trigger: GCAGTTGAATCCTGGAACCCAGTGCCTTATTCTGTG...AGATATGACATGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCGAAGGGTATACAGTCTaGTGCTCAATCCAGTATGTG +
Preference number: 4 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTEGYTV*CSIQYV
Trigger: CACATACTGGATTGAGCACCAGACTGTATACCCTTC...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGGGAAATTGCACTCAATaGCTCCAATTACTCCTACAC +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLGNCTQ*LQLLLH
Trigger: GTGTAGGAGTAATTGGAGTCATTGAGTGCAATTTCC...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAATTCAGACTGCCAGTaGTTCCTCTCCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGERERERERENSDCQ*FLSCSS
Trigger: GCTGGAACAGGAGAGGAATCACTGGCAGTCTGAATT...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGCATGTTGGACTTTCTTaGATTCAGACTGCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLHVGLS*IQTASD
Trigger: ATCACTGGCAGTCTGAATTCAAGAAAGTCCAACATG...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGTCTGACCTGTATTCTTaGTTGCTTCTGGGTATTCTG +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLSDLYS*LLLGIL
Trigger: CAGAATACCCAGAAGCAAGCAAGAATACAGGTCAGA...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCCAGGATTCAACTaGTTTTCGTCTCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLVPGFN*FSSLSK
Trigger: CTTGCTGAGAGACGAAAAGCAGTTGAATCCTGGAAC...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TATTGCTTTTCTGACCCTAGACTCTTGAAAGCCTATTTAAACTGGCCTCTTTCTGTCGCGTGTGGCTGCTaGAGTTGCTCTGGAGGTAGC +
Preference number: 4 (lower is better)
Translates to: YCFSDPRLLKAYLNWPLSVACGC*SCSGGS
Trigger: GCTACCTCCAGAGCAACTCCAGCAGCCACACGCGAC...AGAAAGAGGCCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGAAAAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGATTAGCCGGTACTCCTTaGTATACTCAAAGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LPPAPCTGSHPLVLSHTRLAGTP*YTQSLV
Trigger: AACAAGACTTTGAGTATACCAAGGAGTACCGGCTAA...TCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCATCTTGCAGGTAACATaGATGGATCAATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTILQVT*MDQSSQ
Trigger: CTGGGAAGATTGATCCATCCATGTTACCTGCAAGAT...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTTGCTTCTGGGTATTCTaGGAAAAGGTATGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLCFWVF*EKVWWC
Trigger: ACACCACCATACCTTTTCCCAGAATACCCAGAAGCA...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCATCTTCCAGCTCTCTCTaGTTCTTCAACTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPSSSSL*FFNFGV
Trigger: TACACCAAAGTTGAAGAACCAGAGAGAGCTGGAAGA...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATTCCTCCACCTTTTGCTaGAACAAATTCCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHSSTFC*NKFLSA
Trigger: GGCTGAAAGGAATTTGTTCCAGCAAAAGGTGGAGGA...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGACCAGGATGTCATATTaGTCTGTATCAAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLTRMSY*SVSKSN
Trigger: GTTGGACTTTGATACAGATCAATATGACATCCTGGT...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATTCTTTGGTGGATTACTaGATACCTGGTGGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHSLVDY*IPGGSH
Trigger: ATGAGAACCACCAGGTATTCAGTAATCCACCAAAGA...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGCCCTGGATACAGAATTaGAACCTCCCTATTCTGACC +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGEREREREREPWIQN*NLPILT
Trigger: GGTCAGAATAGGGAGGTTTCAATTCTGTATCCAGGG...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTTTAAAAGGGATCAGCTaGATGGGAGCTCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVLKGIS*MGAPES
Trigger: AGATTCAGGAGCTCCCATTCAGCTGATCCCTTTTAA...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATAAGGGTCGCGTGTGGCTaGTGGAGTTGCTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIRVACG*WSCSGG
Trigger: ACCTCCAGAGCAACTCCAGCAGCCACACGCGACCCT...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCAAGGTGATTCTCACCTaGTTATTTGTGAAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTKVILT*LFVKVG
Trigger: ACCTACCTTCACAAATAAGCAGGTGAGAATCACCTT...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGATCCAGTATGTGATTTaGCTCCAGCACCGTGTACAG +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGEREREREREIQYVI*LQHRVQ
Trigger: CTGTACACGGTGCTGGAGGCAAATCACATACTGGAT...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp TGTATACATGTGCCATGCTGGTCTGCTGCACCCATTAACGCGTCATTTAGCATTTGTATACATGTGCCATaGTGGTCTGCTGCACCCATT +
Preference number: 4 (lower is better)
Translates to: CIHVPCWSAAPINASFSICIHVP*WSAAPI
Trigger: AATGGGTGCAGCAGACCAGCATGGCACATGTATACA...AATGCTAAATGACGCGTTAATGGGTGCAGCAGACCAGCATGGCACATGTATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CCA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGTTACTGAATACCTGGTaGTTCTCATTTTCCATAGGC +
Preference number: 4 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLLLNTW*FSFSIG
Trigger: GCCTATGGAAAATGAGAACCACCAGGTATTCAGTAA...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTTGTAAGGAGCAGGCATaGAATAATCTAGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLCKEQA*NNLEKV
Trigger: CACCTTCTCTAGATTATTCCATGCCTGCTCCTTACA...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTGGAAGCAGGGACCCCTaGCGTTGGTCTTTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSGSRDP*RWSLAP
Trigger: AGGGGCCAAAGACCAACGCCAGGGGTCCCTGCTTCC...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCATGTCATATCTCCCCAAAATAATACCTaGTATACCGGACCCAATATC +
Preference number: 4 (lower is better)
Translates to: SGVVPSLNFLPQIFHVISPQNNT*YTGPNI
Trigger: GATATTGGGTCCGGTATACCAGGTATTATTTTGGGG...AGATATGACATGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TGTATACATGTGCCATGCTGGTCTGCTGCACCCATTAACGCGTCATTTAGCATTATACATGTGCCATGCTaGTCTGCTGCACCCATTAAC +
Preference number: 4 (lower is better)
Translates to: CIHVPCWSAAPINASFSIIHVPC*SAAPIN
Trigger: GTTAATGGGTGCAGCAGACCAGCATGGCACATGTAT...AATGCTAAATGACGCGTTAATGGGTGCAGCAGACCAGCATGGCACATGTATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR TCA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAATACCCCCATTCTTGGTaGAGACAAGGGCGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKYPHSW*RQGRPF
Trigger: GAAAGGACGCCCTTGTCTTCACCAAGAATGGGGGTA...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCGGTCATTTTCACGGTTaGAAATGGAATAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTGHFHG*KWNSSR
Trigger: TCTTGAACTATTCCATTTTCAACCGTGAAAATGACC...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTTTCTGTGTCAAAGTCTaGTACCAGGATGTCATATTG +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLFCVKV*YQDVIL
Trigger: CAATATGACATCCTGGTATCAGACTTTGACACAGAA...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTAAGAGAACCCAAAGGTaGTTCTCACCTGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVKRTQR*FSPAYL
Trigger: CAAATAAGCAGGTGAGAATCACCTTTGGGTTCTCTT...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTAATCCAGCCATTTCTTaGACAGTAAGGATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLNPAIS*TVRIFG
Trigger: ACCAAAGATCCTTACTGTTCAAGAAATGGCTGGATT...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGTCCAGAGGCTTAAGTTaGAGAGATGGTGATCTGCTT +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGERERERERESRGLS*RDGDLL
Trigger: AAGCAGATCACCATCTCTTCAACTTAAGCCTCTGGA...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATCAAAAGGTCCCTTGTTaGCTTCTTCTTTGTTTATGG +
Preference number: 4 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHQKVPC*LLLCLW
Trigger: CCATAAACAAAGAAGAAGTCAACAAGGGACCTTTTG...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAATGGGTAGGCAACAGGTaGTTCTACCCTCCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKWVGNR*FYPPVR
Trigger: CCTTACAGGAGGGTAGAAGCACCTGTTGCCTACCCA...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTACCTGTATTCTTGCTTaGTTCTGGGTATTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVTCILA*FWVFWE
Trigger: TTCCCAGAATACCCAGAAGCAAGCAAGAATACAGGT...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTTCTGTTAGATTCTTCTaGCACCAATCTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVSVRFF*HQSWHL
Trigger: CAGATGCCAAGATTGGTGGCAGAAGAATCTAACAGA...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR GCA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGAACCCATGTGTTTCTTaGTCCAGTACAAGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVNPCVS*SSTSLP
Trigger: CGGAAGGCTTGTACTGGAGCAAGAAACACATGGGTT...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGGTTTTGCTGGTTGAATaGAACAATTGGTACAATAAC +
Preference number: 4 (lower is better)
Translates to: FASSTVYRIPSTCSESYPVLLVE*NNWYNN
Trigger: GTTATTGTACCAATTGTTCCATTCAACCAGCAAAAC...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AGGTCCCATTTCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCAGTTTTGCTGGTTGAATaGAACAATTGGTACAATAAC +
Preference number: 4 (lower is better)
Translates to: RSHFWCGAFLELPPPDLPVLLVE*NNWYNN
Trigger: GTTATTGTACCAATTGTTCCATTCAACCAGCAAAAC...TGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGAAATGGGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGTGGAATAGTTCAAGATaGCTTCTAGGCTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGEREREREREWNSSR*LLGWAM
Trigger: CATTGCCCAGCCTAGAAGCCATCTTGAACTATTCCA...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATTATCATATTCTACATTaGCCAGGCTCTTGGCAATCA +
Preference number: 4 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHYHILH*PGSWQS
Trigger: TGATTGCCAAGAGCCTGGCCAATGTAGAATATGATA...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGAGCATCTCCTGTACTTTaGATGGGAATTATAATAACA +
Preference number: 4 (lower is better)
Translates to: LPPAPCTGSHPLVLSHTRASPVL*MGIIIT
Trigger: TGTTATTATAATTCCCATCCAAAGTACAGGAGATGC...TCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATAGTAAGGATCTTTGGTaGATTACTGAATACCTGGTG +
Preference number: 4 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHSKDLW*ITEYLV
Trigger: CACCAGGTATTCAGTAATCCACCAAAGATCCTTACT...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCAAACAGTAAGGATCTTTaGTGGATTACTGAATACCTG +
Preference number: 4 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPNSKDL*WITEYL
Trigger: CAGGTATTCAGTAATCCACCAAAGATCCTTACTGTT...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AGGTCCCATTTCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCATCCATTTGTACTTACTaGAAAACTGTAAAACACTGG +
Preference number: 4 (lower is better)
Translates to: RSHFWCGAFLELPPPDLPSICTY*KTVKHW
Trigger: CCAGTGTTTTACAGTTTTCCAGTAAGTACAAATGGA...TGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGAAATGGGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTTGGGAAAAGGTATGGTaGTGTACTTCTCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVWEKVW*CTSLRT
Trigger: AGTTCTGAGAGAAGTACACCACCATACCTTTTCCCA...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTTTCTGGGAAAAGGTATaGTGGTGTACTTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVFWEKV*WCTSLR
Trigger: TCTGAGAGAAGTACACCACCATACCTTTTCCCAGAA...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTCCTGGCGTTGGTCTTTaGCCCCTGGATACAGAATTG +
Preference number: 4 (lower is better)
Translates to: RKENRQKIREEKGIQSGAPGVGL*PLDTEL
Trigger: CAATTCTGTATCCAGGGGCCAAAGACCAACGCCAGG...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTTTGCTTTCTCCCCAATaGCTGCAGCAGGGATTGCAG +
Preference number: 4 (lower is better)
Translates to: RKENRQKIREEKGIQSGALLSPQ*LQQGLQ
Trigger: CTGCAATCCCTGCTGCAGCCATTGGGGAGAAAGCAA...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TGTATACATGTGCCATGCTGGTCTGCTGCACCCATTAACGCGTCATTTAGCATTGATCGCCATTCTAACTaGTGTGAGATGGCATCTCAT +
Preference number: 4 (lower is better)
Translates to: CIHVPCWSAAPINASFSIDRHSN*CEMASH
Trigger: ATGAGATGCCATCTCACACCAGTTAGAATGGCGATC...AATGCTAAATGACGCGTTAATGGGTGCAGCAGACCAGCATGGCACATGTATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR TCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGTCTTTGGTGGATTACTaGATACCTGGTGGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGERERERERESLVDY*IPGGSH
Trigger: ATGAGAACCACCAGGTATTCAGTAATCCACCAAAGA...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCACACTAGGGCTATaGATTCCCTCATATCCAATT +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGERERERERESTLGL*IPSYPI
Trigger: AATTGGATATGAGGGAATTCATAGCCCTAGTGTGCT...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGCATGTTGGACTTTCTTaGATTCAGACTGCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGEREREREREHVGLS*IQTASD
Trigger: ATCACTGGCAGTCTGAATTCAAGAAAGTCCAACATG...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGCGAAGGCTGCAAACATaGGTTGTACTTGTTAGCTTA +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGERERERERERRLQT*VVLVSL
Trigger: TAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCG...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp TGTATACATGTGCCATGCTGGTCTGCTGCACCCATTAACGCGTCATTTAGCATTGTTTTAGACATGAAGTaGTTGCCCATTCCTATGTCC +
Preference number: 4 (lower is better)
Translates to: CIHVPCWSAAPINASFSIVLDMK*LPIPMS
Trigger: GGACATAGGAATGGGCAAGCACTTCATGTCTAAAAC...AATGCTAAATGACGCGTTAATGGGTGCAGCAGACCAGCATGGCACATGTATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CCA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAGGTACAATAACTGCCTaGGCCTGGACACATTCCAGA +
Preference number: 4 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKGTITA*AWTHSR
Trigger: TCTGGAATGTGTCCAGGCCCAGGCAGTTATTGTACC...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTGAATGGAACAATTaGTACAATAACTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGEREREREREVEWNN*YNNCLG
Trigger: GCCCAGGCAGTTATTGTACCAATTGTTCCATTCAAC...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGTCCTCCACCTTTTGCTaGAACAAATTCCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVSSTFC*NKFLSA
Trigger: GGCTGAAAGGAATTTGTTCCAGCAAAAGGTGGAGGA...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGGGAAATTGCACTCAATaGCTCCAATTACTCCTACAC +
Preference number: 4 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVGNCTQ*LQLLLH
Trigger: GTGTAGGAGTAATTGGAGTCATTGAGTGCAATTTCC...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATACCTTCCAGTAAGCATTaGGCTTCTGGGCAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIPSSKH*ASGQGH
Trigger: ATGCCCTTGCCCAGAAGCTCAATGCTTACTGGAAGG...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCCAGCCATTTCTTaGACAGTAAGGATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGERERERERENPAIS*TVRIFG
Trigger: ACCAAAGATCCTTACTGTTCAAGAAATGGCTGGATT...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTCCCTGGATACAGAATTaGAACCTCCCTATTCTGACC +
Preference number: 4 (lower is better)
Translates to: RKENRQKIREEKGIQSGAPWIQN*NLPILT
Trigger: GGTCAGAATAGGGAGGTTTCAATTCTGTATCCAGGG...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR TCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATACCCATCCACTTGTTCTaGGTCATACCCGATCTCACG +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIPIHLF*VIPDLT
Trigger: CGTGAGATCGGGTATGACTCAGAACAAGTGGATGGG...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGGCTCAATCCAGTATGTaGTTTGCCTCCAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMAQSSM*FASSTV
Trigger: CACGGTGCTGGAGGCAAATCACATACTGGATTGAGC...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGTTTCTCCCCAATGGCTaGAGCAGGGATTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMFLPNG*SRDCSR
Trigger: TCTGCTGCAATCCCTGCTGCAGCCATTGGGGAGAAA...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGCTCCTCATAGCCTCTTaGTTTCTCCCCAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMLLIAS*FLPNGC
Trigger: GCAGCCATTGGGGAGAAAGCAAGAGGCTATGAGGAG...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTAACCCATGTGTTTCTTaGTCCAGTACAAGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: RKENRQKIREEKGIQSGANPCVS*SSTSLP
Trigger: CGGAAGGCTTGTACTGGAGCAAGAAACACATGGGTT...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATTCCATTTGTACTTACTaGAAAACTGTAAAACACTGG +
Preference number: 4 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHSICTY*KTVKHW
Trigger: CCAGTGTTTTACAGTTTTCCAGTAAGTACAAATGGA...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGTTCTGGGAAAAGGTATaGTGGTGTACTTCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVFWEKV*WCTSLR
Trigger: TCTGAGAGAAGTACACCACCATACCTTTTCCCAGAA...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGCCTGGCGTTGGTCTTTaGCCCCTGGATACAGAATTG +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMPGVGL*PLDTEL
Trigger: CAATTCTGTATCCAGGGGCCAAAGACCAACGCCAGG...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTCACAGAATAAGGCACTaGGTTCCAGGATTCAACTGC +
Preference number: 4 (lower is better)
Translates to: RKENRQKIREEKGIQSGAHRIRH*VPGFNC
Trigger: GCAGTTGAATCCTGGAACCCAGTGCCTTATTCTGTG...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp TGTATACATGTGCCATGCTGGTCTGCTGCACCCATTAACGCGTCATTTAGCATTGATGGACATTTGGCTTaGTTCCAAGTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: CIHVPCWSAAPINASFSIDGHLA*FQVFAI
Trigger: AATAGCAAAGACTTGGAACCAAGCCAAATGTCCATC...AATGCTAAATGACGCGTTAATGGGTGCAGCAGACCAGCATGGCACATGTATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR TCA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATTCGGTGTAGTTTATaGGGTGTCATCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKIRCSL*GVIPHP
Trigger: TGGATGTGGGATGACACCTCATAAACTACACCGAAT...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp ACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCATTCGGTGTAGTTTATaGGGTGTCATCCCACATCCA +
Preference number: 4 (lower is better)
Translates to: TSTMVELVYSPTNSVKVFIRCSL*GVIPHP
Trigger: TGGATGTGGGATGACACCTCATAAACTACACCGAAT...GAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR TCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGGCATGGAGCCTGACTTaGAACCATTACCAAAGACCC +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMAWSLT*NHYQRP
Trigger: GGGTCTTTGGTAATGGTTTCAAGTCAGGCTCCATGC...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGTTCTGTGTCAAAGTCTaGTACCAGGATGTCATATTG +
Preference number: 4 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVFCVKV*YQDVIL
Trigger: CAATATGACATCCTGGTATCAGACTTTGACACAGAA...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAATTAAAAGGGATCAGCTaGATGGGAGCTCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKLKGIS*MGAPES
Trigger: AGATTCAGGAGCTCCCATTCAGCTGATCCCTTTTAA...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATAGGGATGGCATCAAACTaGGCCAGCAGGTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIGMASN*ASRSFS
Trigger: TGAAAATGACCTGCTGGCCCAGTTTGATGCCATCCC...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp AGATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTCGAGTTGGCTTCACCTaGCACCCCACCTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: RSSMSYLYHSVVHIIHFCRVGFT*HPTFSK
Trigger: TTTTGAGAAGGTGGGGTGCCAGGTGAAGCCAACTCG...ACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGGGATTACTGAATACCTaGTGGTTCTCATTTTCCATA +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGEREREREREGLLNT*WFSFSI
Trigger: TATGGAAAATGAGAACCACCAGGTATTCAGTAATCC...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGAGTAAGGATCTTTGGTaGATTACTGAATACCTGGTG +
Preference number: 4 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVSKDLW*ITEYLV
Trigger: CACCAGGTATTCAGTAATCCACCAAAGATCCTTACT...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TATTGCTTTTCTGACCCTAGACTCTTGAAAGCCTATTTAAACTGGCCTCTTTCTGAACTCGATTTATCATaGCTGTTCTCCCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: YCFSDPRLLKAYLNWPLSELDLS*LFSPSG
Trigger: CCCAGAAGGGGAGAACAGCCATGATAAATCGAGTTC...AGAAAGAGGCCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGAAAAGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp AGATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTTTGCTTTCTCCCCAATaGCTGCAGCAGGGATTGCAG +
Preference number: 4 (lower is better)
Translates to: RSSMSYLYHSVVHIIHFCLLSPQ*LQQGLQ
Trigger: CTGCAATCCCTGCTGCAGCCATTGGGGAGAAAGCAA...ACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR CAA 72 bp ATTCTAACTGGTGTGAGATGGCATCTCATAGTGGTTTaGATTTGCATTTCTCTGATGGCCAGTGATGATGAG +
Preference number: 4 (lower is better)
Translates to: ILTGVRWHLIVV*ICISLMASDDE
Trigger: CTCATCATCACTGGCCATCAGAGAAATGCAAATCAAAACCACTATGAGATGCCATCTCACACCAGTTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR TCA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTCTGAATGGGAGCTCCTaGATCTCTAACACCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSLNGSS*ISNTFG
Trigger: GCCAAAGGTGTTAGAGATTCAGGAGCTCCCATTCAG...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAATCTGTTAGATTCTTCTaGCACCAATCTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKSVRFF*HQSWHL
Trigger: CAGATGCCAAGATTGGTGGCAGAAGAATCTAACAGA...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp ATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCACATATGTATACATGTaGCATGCTGGTCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: MVELVYSPTNSVKVFLFLTYVYM*HAGLLH
Trigger: GTGCAGCAGACCAGCATGGCACATGTATACATATGT...GAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CCA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGGCATCTCCTGTACTTTaGATGGGAATTATAATAACA +
Preference number: 4 (lower is better)
Translates to: LYIRHKGEGEREREREREASPVL*MGIIIT
Trigger: TGTTATTATAATTCCCATCCAAAGTACAGGAGATGC...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TATTGCTTTTCTGACCCTAGACTCTTGAAAGCCTATTTAAACTGGCCTCTTTCTGAGTTCTTGTTCCTCTaGAACAGAGCATCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: YCFSDPRLLKAYLNWPLSEFLFL*NRASPV
Trigger: TACAGGAGATGCTCTGTTCCAGAGGAACAAGAACTC...AGAAAGAGGCCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGAAAAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TATTGCTTTTCTGACCCTAGACTCTTGAAAGCCTATTTAAACTGGCCTCTTTCTCACTCACTGACAGTGTaGCCATGCTCATTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: YCFSDPRLLKAYLNWPLSHSLTV*PCSFFK
Trigger: CTTAAAGAATGAGCATGGCCACACTGTCAGTGAGTG...AGAAAGAGGCCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGAAAAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp AGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGATCTCAGCTTTTTACATATaGCTAGCCAGTTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SMAIFTILILPTHEHGMISAFYI*LASFPS
Trigger: GCTGGGAAAACTGGCTAGCCATATGTAAAAAGCTGA...GATCATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR TCA 90 bp AGATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTATAGAAGTCCAACAGTaGGAGTACCCCCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: RSSMSYLYHSVVHIIHFCIEVQQ*EYPHSW
Trigger: CCAAGAATGGGGGTACTCTCACTGTTGGACTTCTAT...ACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGTGCGGATGTTCCAAATaGGAACACGAGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMCGCSK*EHECLF
Trigger: AAAAAGGCACTCGTGTTCTCATTTGGAACATCCGCA...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp GTTCCCCTTCGTATGTTCATGTGTTCTCATTGTTCAATTCCCATCTATGAGTCTCCCATGAGCATGGAATaGTCTTCCATTTGTTTGTAT +
Preference number: 4 (lower is better)
Translates to: VPLRMFMCSHCSIPIYESPMSME*SSICLY
Trigger: ATACAAACAAATGGAAGATCATTCCATGCTCATGGG...AGACTCATAGATGGGAATTGAACAATGAGAACACATGAACATACGAAGGGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR GCA 90 bp GATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTGGTTCCAGGATTCAACTaGTTTTCGTCTCTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: DLPCHICTTQLYISYTFVVPGFN*FSSLSK
Trigger: CTTGCTGAGAGACGAAAAGCAGTTGAATCCTGGAAC...CACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATATACCAAAGACCCCAATaGGACACTGGCTCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIYQRPQ*DTGSSL
Trigger: TAAAGAAGAGCCAGTGTCCCATTGGGGTCTTTGGTA...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGTGCTTCTGGGTATTCTaGGAAAAGGTATGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMCFWVF*EKVWWC
Trigger: ACACCACCATACCTTTTCCCAGAATACCCAGAAGCA...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATAGAAGGGTATACAGTCTaGTGCTCAATCCAGTATGTG +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIEGYTV*CSIQYV
Trigger: CACATACTGGATTGAGCACCAGACTGTATACCCTTC...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGTTTAGGTCCCATTTCTaGTGTGGTGCCTTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMFRSHF*CGAFLE
Trigger: TTCAAGGAAGGCACCACACCAGAAATGGGACCTAAA...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR CAA 72 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTaGTTAGCTTACCCCAAAATAATACCTGGTATACCG +
Preference number: 4 (lower is better)
Translates to: CYIFEGCKHELY*LAYPKIIPGIP
Trigger: CGGTATACCAGGTATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
3UTR CAA 72 bp CGAGATTGTTACATCTTCGAAGGCTGCAAACATGAGTaGTACTTGTTAGCTTACCCCAAAATAATACCTGGT +
Preference number: 4 (lower is better)
Translates to: RDCYIFEGCKHE*YLLAYPKIIPG
Trigger: ACCAGGTATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACAATCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp AGATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTTGGCCTGGCTACAGTTaGGGTCTCAAAATTATCTTG +
Preference number: 4 (lower is better)
Translates to: RSSMSYLYHSVVHIIHFCWPGYS*GLKIIL
Trigger: CAAGATAATTTTGAGACCTCAACTGTAGCCAGGCCA...ACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp AGATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTAATTGGTACAATAACTaGCTGGGCCTGGACACATTC +
Preference number: 4 (lower is better)
Translates to: RSSMSYLYHSVVHIIHFCNWYNN*LGLDTF
Trigger: GAATGTGTCCAGGCCCAGGCAGTTATTGTACCAATT...ACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTGAAGAGATGGTGATCTaGTTTCTTCTCCACCAGAAG +
Preference number: 4 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSEEMVI*FLLHQK
Trigger: CTTCTGGTGGAGAAGAAAGCAGATCACCATCTCTTC...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGACCTGTATTCTTGCTTaGTTCTGGGTATTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMTCILA*FWVFWE
Trigger: TTCCCAGAATACCCAGAAGCAAGCAAGAATACAGGT...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGGGGTATACAGTCTGGTaGTCAATCCAGTATGTGATT +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMGYTVW*SIQYVI
Trigger: AATCACATACTGGATTGAGCACCAGACTGTATACCC...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATAATCTTGCAGGTAACATaGATGGATCAATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIILQVT*MDQSSQ
Trigger: CTGGGAAGATTGATCCATCCATGTTACCTGCAAGAT...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTGGATTACTGAATACCTaGTGGTTCTCATTTTCCATA +
Preference number: 4 (lower is better)
Translates to: RKENRQKIREEKGIQSGAGLLNT*WFSFSI
Trigger: TATGGAAAATGAGAACCACCAGGTATTCAGTAATCC...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATATGTAAGGAGCAGGCATaGAATAATCTAGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIICKEQA*NNLEKV
Trigger: CACCTTCTCTAGATTATTCCATGCCTGCTCCTTACA...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATATGGGAAAAGGTATGGTaGTGTACTTCTCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIWEKVW*CTSLRT
Trigger: AGTTCTGAGAGAAGTACACCACCATACCTTTTCCCA...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATATCTTCCAGCTCTCTCTaGTTCTTCAACTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIISSSSL*FFNFGV
Trigger: TACACCAAAGTTGAAGAACCAGAGAGAGCTGGAAGA...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp TATTGCTTTTCTGACCCTAGACTCTTGAAAGCCTATTTAAACTGGCCTCTTTCTGGTCATTTTCACGGTTaGAAATGGAATAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: YCFSDPRLLKAYLNWPLSGHFHG*KWNSSR
Trigger: TCTTGAACTATTCCATTTTCAACCGTGAAAATGACC...AGAAAGAGGCCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGAAAAGCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTAAGAGAACCCAAAGGTaGTTCTCACCTGCTTATTTG +
Preference number: 4 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSKRTQR*FSPAYL
Trigger: CAAATAAGCAGGTGAGAATCACCTTTGGGTTCTCTT...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp GATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTGAAGGTGATTCTCACCTaGTTATTTGTGAAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: DLPCHICTTQLYISYTFVKVILT*LFVKVG
Trigger: ACCTACCTTCACAAATAAGCAGGTGAGAATCACCTT...CACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTTCTGACCTGTATTCTTaGTTGCTTCTGGGTATTCTG +
Preference number: 4 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSSDLYS*LLLGIL
Trigger: CAGAATACCCAGAAGCAAGCAAGAATACAGGTCAGA...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR GCA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGTACATCTTCGAAGGCTaGAAACATGAGTTGTACTTG +
Preference number: 4 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMYIFEG*KHELYL
Trigger: CAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTA...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp GATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTGTTACTGAATACCTGGTaGTTCTCATTTTCCATAGGC +
Preference number: 4 (lower is better)
Translates to: DLPCHICTTQLYISYTFVLLNTW*FSFSIG
Trigger: GCCTATGGAAAATGAGAACCACCAGGTATTCAGTAA...CACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTACCAGGATGTCATATTaGTCTGTATCAAAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSTRMSY*SVSKSN
Trigger: GTTGGACTTTGATACAGATCAATATGACATCCTGGT...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTCAAAAGGTCCCTTGTTaGCTTCTTCTTTGTTTATGG +
Preference number: 4 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSQKVPC*LLLCLW
Trigger: CCATAAACAAAGAAGAAGTCAACAAGGGACCTTTTG...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATACACATATCCAGGTCATaGAAATTAAAGCTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIHISRS*KLKLSG
Trigger: ACCTGAAAGCTTTAATTTTCATGACCTGGATATGTG...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR TCA 90 bp AGAATGATGATTTCCAATTTTATCCATGTCCCTACAAAGGACATGAACTCATCAAATCCAGTCTATCATTaGTGGACATTTGGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RMMISNFIHVPTKDMNSSNPVYH*WTFGLV
Trigger: AACCAAGCCAAATGTCCATCAATGATAGACTGGATT...TGATGAGTTCATGTCCTTTGTAGGGACATGGATAAAATTGGAAATCATCATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CCA 90 bp AGATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTTATCATATTCTACATTaGCCAGGCTCTTGGCAATCA +
Preference number: 4 (lower is better)
Translates to: RSSMSYLYHSVVHIIHFCYHILH*PGSWQS
Trigger: TGATTGCCAAGAGCCTGGCCAATGTAGAATATGATA...ACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp AGATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTTTAGCCGGTACTCCTTaGTATACTCAAAGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RSSMSYLYHSVVHIIHFCLAGTP*YTQSLV
Trigger: AACAAGACTTTGAGTATACCAAGGAGTACCGGCTAA...ACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTAAAGCCTATTTAAACTaGCCTCTTTCTCCACACCAA +
Preference number: 4 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSKAYLN*PLSPHQ
Trigger: TTGGTGTGGAGAAAGAGGCCAGTTTAAATAGGCTTT...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CCA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTAACAGTAAGGATCTTTaGTGGATTACTGAATACCTG +
Preference number: 4 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSNSKDL*WITEYL
Trigger: CAGGTATTCAGTAATCCACCAAAGATCCTTACTGTT...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS TCA 90 bp AGCGCGCTCCAGCCACCTGTCCCGGGCGGGAGGGGTGAGGCCGGCTaGGGCAAGCGGCGGCTCCGCCCTGTCAGCACCTCTACCGACCCG +
Preference number: 5 (lower is better)
Translates to: SALQPPVPGGRGEAG*GKRRLRPVSTSTDP
Trigger: CGGGTCGGTAGAGGTGCTGACAGGGCGGAGCCGCCGCTTGCCTCAGCCGGCCTCACCCCTCCCGCCCGGGACAGGTGGCTGGAGCGCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGCACCTTCTCCACGAGTaGGCTTCACCTGGCACCCCA +
Preference number: 5 (lower is better)
Translates to: FASSTVYRIPSTCSESYPHLLHE*ASPGTP
Trigger: TGGGGTGCCAGGTGAAGCCAACTCGTGGAGAAGGTG...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTCAGGGACCCCTGGCGTaGGTCTTTGGCCCCTGGATA +
Preference number: 5 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLQGPLA*VFGPWI
Trigger: TATCCAGGGGCCAAAGACCAACGCCAGGGGTCCCTG...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS GCA 90 bp ATGACCTTCGCTCTCCTCATAGCCTCTTGCTTTCTCCCCAATGGCTaGAGCAGGGATTGCAGCAGAGGCCACAGAATAAGGCACTGGGTT +
Preference number: 5 (lower is better)
Translates to: MTFALLIASCFLPNG*SRDCSRGHRIRHWV
Trigger: AACCCAGTGCCTTATTCTGTGGCCTCTGCTGCAATCCCTGCTGCAGCCATTGGGGAGAAAGCAAGAGGCTATGAGGAGAGCGAAGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS-3UTR CAA 90 bp TTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGAAGAGTACCCCCATTCTaGGTGAAGACAAGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: LPPAPCTGSHPLVLSHTRRVPPF*VKTRAS
Trigger: GGACGCCCTTGTCTTCACCAAGAATGGGGGTACTCT...TCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp TTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGACAGGAACCTTCGGTATaGGCCTGGCTACAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LPPAPCTGSHPLVLSHTRQEPSV*AWLQLR
Trigger: CCTCAACTGTAGCCAGGCCAATACCGAAGGTTCCTG...TCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS TCA 90 bp GTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTaGGTCATACCCGATCTCACGAAGCTCCAAGTGAGGGAGGACAGA +
Preference number: 5 (lower is better)
Translates to: VICLQHRVQDPIHLF*VIPDLTKLQVREDR
Trigger: TCTGTCCTCCCTCACTTGGAGCTTCGTGAGATCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255495.7
ENST00000355610.9
ENST00000478924.1
CDS CCA 90 bp AATGGCTGCAGCAGGGATTGCAGCAGAGGCCACAGAATAAGGCACTaGGTTCCAGGATTCAACTGCTTTTCGTCTCTCAGCAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: NGCSRDCSRGHRIRH*VPGFNCFSSLSKLL
Trigger: GAGGAGCTTGCTGAGAGACGAAAAGCAGTTGAATCCTGGAACCCAGTGCCTTATTCTGTGGCCTCTGCTGCAATCCCTGCTGCAGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS-3UTR CAA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCGGGCAAGGGCATTTATaGTTAGCCGGTACTCCTTGG +
Preference number: 5 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTGQGHL*LAGTPW
Trigger: CCAAGGAGTACCGGCTAACAATAAATGCCCTTGCCC...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS TCA 90 bp AAGCAGGGACCCCTGGCGTTGGTCTTTGGCCCCTGGATACAGAATTaGAACCTCCCTATTCTGACCTGTATTCTTGCTTGCTTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: KQGPLALVFGPWIQN*NLPILTCILACFWV
Trigger: TACCCAGAAGCAAGCAAGAATACAGGTCAGAATAGGGAGGTTTCAATTCTGTATCCAGGGGCCAAAGACCAACGCCAGGGGTCCCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS-3UTR CAA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACGCATGGAGCCTGACTaGAAACCATTACCAAAGACC +
Preference number: 5 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPRMEPD*KPLPKT
Trigger: GGTCTTTGGTAATGGTTTCAAGTCAGGCTCCATGCG...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCAACACGAGTGCCTTTTTaGCCTGGGATGGCATCAAAC +
Preference number: 5 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPTRVPF*PGMASN
Trigger: GTTTGATGCCATCCCAGGCAAAAAAGGCACTCGTGT...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS TCA 90 bp CCGCCTCCTGGGTACTGTAGATCACCAATTCATGTTGGACTTTCTTaGATTCAGACTGCCAGTGATTCCTCTCCTGTTCCAGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: PPPGYCRSPIHVGLS*IQTASDSSPVPAPP
Trigger: TGGAGGAGCTGGAACAGGAGAGGAATCACTGGCAGTCTGAATTCAAGAAAGTCCAACATGAATTGGTGATCTACAGTACCCAGGAGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255495.7
ENST00000355610.9
ENST00000478924.1
CDS GCA 90 bp TGCAGCAGAGGCCACAGAATAAGGCACTGGGTTCCAGGATTCAACTaGTTTTCGTCTCTCAGCAAGCTCCTCTCTGTTAAAAGGGATCAG +
Preference number: 5 (lower is better)
Translates to: CSRGHRIRHWVPGFN*FSSLSKLLSVKRDQ
Trigger: CTGATCCCTTTTAACAGAGAGGAGCTTGCTGAGAGACGAAAAGCAGTTGAATCCTGGAACCCAGTGCCTTATTCTGTGGCCTCTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 90 bp TGTACTTCTCTCAGAACTCGATTTATCATGGCTGTTCTCCCCTTCTaGGTAGGCAACAGGTGCTTCTACCCTCCTGTAAGGAGCAGGCAT +
Preference number: 5 (lower is better)
Translates to: CTSLRTRFIMAVLPF*VGNRCFYPPVRSRH
Trigger: ATGCCTGCTCCTTACAGGAGGGTAGAAGCACCTGTTGCCTACCCAGAAGGGGAGAACAGCCATGATAAATCGAGTTCTGAGAGAAGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS-3UTR CAA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTTCTCCTCATAGCCTCTaGCTTTCTCCCCAATGGCTG +
Preference number: 5 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVSPHSL*LSPQWL
Trigger: CAGCCATTGGGGAGAAAGCAAGAGGCTATGAGGAGA...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACAGCTCCTCCACCTTTaGCTGGAACAAATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPQLLHL*LEQIPF
Trigger: GAAAGGAATTTGTTCCAGCAAAAGGTGGAGGAGCTG...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGGGTGTGGTGCCTTCCTaGAACTTCCTCCCCCAGATC +
Preference number: 5 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVGVVPS*NFLPQI
Trigger: GATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACC...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS TCA 90 bp GTTGTGCTACCTCTGTTAGATTCTTCTGCCACCAATCTTGGCATCTaGTCTTCTAATTCTTCAGGAAGCAGGGACCCCTGGCGTTGGTCT +
Preference number: 5 (lower is better)
Translates to: VVLPLLDSSATNLGI*SSNSSGSRDPWRWS
Trigger: AGACCAACGCCAGGGGTCCCTGCTTCCTGAAGAATTAGAAGATCAGATGCCAAGATTGGTGGCAGAAGAATCTAACAGAGGTAGCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 90 bp GCTTTTCGTCTCTCAGCAAGCTCCTCTCTGTTAAAAGGGATCAGCTaGATGGGAGCTCCTGAATCTCTAACACCTTTGGCAACACCCACA +
Preference number: 5 (lower is better)
Translates to: AFRLSASSSLLKGIS*MGAPESLTPLATPT
Trigger: TGTGGGTGTTGCCAAAGGTGTTAGAGATTCAGGAGCTCCCATTCAGCTGATCCCTTTTAACAGAGAGGAGCTTGCTGAGAGACGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS GCA 90 bp CTTTCAGAATCTGGAATTCAGCTTGGCGATAACCCATGTGTTTCTTaGTCCAGTACAAGCCTTCCGCCTCCTGGGTACTGTAGATCACCA +
Preference number: 5 (lower is better)
Translates to: LSESGIQLGDNPCVS*SSTSLPPPGYCRSP
Trigger: TGGTGATCTACAGTACCCAGGAGGCGGAAGGCTTGTACTGGAGCAAGAAACACATGGGTTATCGCCAAGCTGAATTCCAGATTCTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255495.7
ENST00000355610.9
ENST00000478924.1
CDS CCA 90 bp GATCTTCTAATTCTTCAGGAAGCAGGGACCCCTGGCGTTGGTCTTTaGCCCCTGGATACAGAATTGAAACCTCCCTATTCTGACCTGTAT +
Preference number: 5 (lower is better)
Translates to: DLLILQEAGTPGVGL*PLDTELKPPYSDLY
Trigger: ATACAGGTCAGAATAGGGAGGTTTCAATTCTGTATCCAGGGGCCAAAGACCAACGCCAGGGGTCCCTGCTTCCTGAAGAATTAGAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS-3UTR CAA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCGTATCATATTCTACATaGGCCAGGCTCTTGGCAATC +
Preference number: 5 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTVSYST*ARLLAI
Trigger: GATTGCCAAGAGCCTGGCCAATGTAGAATATGATAC...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGAACTGGTTACTATTCTaGCAAGAGAACCCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: FASSTVYRIPSTCSESYPNWLLF*QENPKV
Trigger: CACCTTTGGGTTCTCTTGCAAGAATAGTAACCAGTT...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGACCTGTATTCTTGCTaGCTTCTGGGTATTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLDLYSC*LLGILG
Trigger: TCCCAGAATACCCAGAAGCAAGCAAGAATACAGGTC...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp TCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCATGTCATATCTGACCTGTATTCTTGCTaGCTTCTGGGTATTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SGVVPSLNFLPQIFHVISDLYSC*LLGILG
Trigger: TCCCAGAATACCCAGAAGCAAGCAAGAATACAGGTC...AGATATGACATGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATGAATCTCTAACACCTTaGGCAACACCCACAACAGCT +
Preference number: 5 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHESLTP*ATPTTA
Trigger: AGCTGTTGTGGGTGTTGCCAAAGGTGTTAGAGATTC...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp AGGTCCCATTTCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCAATGTTTCCAACGAGATaGTTACATCTTCGAAGGCTG +
Preference number: 5 (lower is better)
Translates to: RSHFWCGAFLELPPPDLPMFPTR*LHLRRL
Trigger: CAGCCTTCGAAGATGTAACAATCTCGTTGGAAACAT...TGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGAAATGGGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS TCA 90 bp TGCCTGGGATGGCATCAAACTGGGCCAGCAGGTCATTTTCACGGTTaGAAATGGAATAGTTCAAGATGGCTTCTAGGCTGGGCAATGAAT +
Preference number: 5 (lower is better)
Translates to: CLGWHQTGPAGHFHG*KWNSSRWLLGWAMN
Trigger: ATTCATTGCCCAGCCTAGAAGCCATCTTGAACTATTCCATTTTCAACCGTGAAAATGACCTGCTGGCCCAGTTTGATGCCATCCCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 90 bp AGCAAGCTCCTCTCTGTTAAAAGGGATCAGCTGAATGGGAGCTCCTaGATCTCTAACACCTTTGGCAACACCCACAACAGCTACAAAAGG +
Preference number: 5 (lower is better)
Translates to: SKLLSVKRDQLNGSS*ISNTFGNTHNSYKR
Trigger: CCTTTTGTAGCTGTTGTGGGTGTTGCCAAAGGTGTTAGAGATTCAGGAGCTCCCATTCAGCTGATCCCTTTTAACAGAGAGGAGCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS-3UTR CAA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCATGGAGCCTGACTaGAAACCATTACCAAAGACC +
Preference number: 5 (lower is better)
Translates to: LYIRHKGEGERERERERERMEPD*KPLPKT
Trigger: GGTCTTTGGTAATGGTTTCAAGTCAGGCTCCATGCG...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCATTGGCCTGGCTACAGTaGAGGTCTCAAAATTATCTT +
Preference number: 5 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPLAWLQ*RSQNYL
Trigger: AAGATAATTTTGAGACCTCAACTGTAGCCAGGCCAA...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATTTCATCAGTGAGTTCTaGTTCCTCTGGAACAGAGCA +
Preference number: 5 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHFISEF*FLWNRA
Trigger: TGCTCTGTTCCAGAGGAACAAGAACTCACTGATGAA...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACAATCCAGCCATTTCTaGAACAGTAAGGATCTTTGG +
Preference number: 5 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPQSSHF*NSKDLW
Trigger: CCAAAGATCCTTACTGTTCAAGAAATGGCTGGATTG...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGCTTCTGCCACCAATCTaGGCATCTGATCTTCTAATT +
Preference number: 5 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLLLPPI*ASDLLI
Trigger: AATTAGAAGATCAGATGCCAAGATTGGTGGCAGAAG...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp GTGCTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCAAATCTGGAATTCAGCTaGGCGATAACCCATGTGTTT +
Preference number: 5 (lower is better)
Translates to: VLNPVCDLPPAPCTGSHPNLEFS*AITHVF
Trigger: AAACACATGGGTTATCGCCAAGCTGAATTCCAGATT...TGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp CTCAATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTTCTTGCTTTTCCTCTTaGGTTCTTTCCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LNPVCDLPPAPCTGSHPLSCFSS*VLSSSA
Trigger: AGCTGAGCTGGAAAGAACCAAAGAGGAAAAGCAAGA...AAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTAATCCAGTATGTGATTaGCCTCCAGCACCGTGTACA +
Preference number: 5 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVNPVCD*PPAPCT
Trigger: TGTACACGGTGCTGGAGGCAAATCACATACTGGATT...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp GATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTGCACCTTCTCCACGAGTaGGCTTCACCTGGCACCCCA +
Preference number: 5 (lower is better)
Translates to: DLPCHICTTQLYISYTFVHLLHE*ASPGTP
Trigger: TGGGGTGCCAGGTGAAGCCAACTCGTGGAGAAGGTG...CACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGGGTATACTCAAAGTCTaGTTTGTTGTAGGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLGILKV*FVVGRF
Trigger: AAACCTGCCTACAACAAACAAGACTTTGAGTATACC...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTGTTAGCCGGTACTCCTaGGTATACTCAAAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVVSRYS*VYSKSC
Trigger: ACAAGACTTTGAGTATACCAAGGAGTACCGGCTAAC...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp AGGTCCCATTTCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCAAGCATCTCCTGTACTTaGGATGGGAATTATAATAAC +
Preference number: 5 (lower is better)
Translates to: RSHFWCGAFLELPPPDLPSISCT*DGNYNN
Trigger: GTTATTATAATTCCCATCCAAAGTACAGGAGATGCT...TGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGAAATGGGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATTCTTGTTTCTTAGCTTaGCTCAAGCACAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHSCFLA*LKHRSS
Trigger: TGAAGACCTGTGCTTGAGCAAAGCTAAGAAACAAGA...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGCTCAACAGTTTGTTCTaGTTTCTTAGCTTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: FASSTVYRIPSTCSESYPLNSLF*FLSFAQ
Trigger: TTGAGCAAAGCTAAGAAACAAGAACAAACTGTTGAG...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTCAGGGACCCCTGGCGTaGGTCTTTGGCCCCTGGATA +
Preference number: 5 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSQGPLA*VFGPWI
Trigger: TATCCAGGGGCCAAAGACCAACGCCAGGGGTCCCTG...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCCGACAAAAGGTCCCTTGTaGACTTCTTCTTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: FASSTVYRIPSTCSESYPTKGPL*TSSLFM
Trigger: CATAAACAAAGAAGAAGTCAACAAGGGACCTTTTGT...CGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp CCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGGCTACAAAAGGTCCCTaGTTGACTTCTTCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: PVCDLPPAPCTGSHPLVLATKGP*LTSSLF
Trigger: AAACAAAGAAGAAGTCAACAAGGGACCTTTTGTAGC...CAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGGAATCTCTAACACCTTaGGCAACACCCACAACAGCT +
Preference number: 5 (lower is better)
Translates to: LYIRHKGEGEREREREREESLTP*ATPTTA
Trigger: AGCTGTTGTGGGTGTTGCCAAAGGTGTTAGAGATTC...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCATGTCATATCTTCTGACCCTAGACTCTaGAAAGCCTATTTAAACTGG +
Preference number: 5 (lower is better)
Translates to: SGVVPSLNFLPQIFHVISSDPRL*KAYLNW
Trigger: CCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGA...AGATATGACATGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS TCA 90 bp CGTTGGTCTTTGGCCCCTGGATACAGAATTGAAACCTCCCTATTCTaGCCTGTATTCTTGCTTGCTTCTGGGTATTCTGGGAAAAGGTAT +
Preference number: 5 (lower is better)
Translates to: RWSLAPGYRIETSLF*PVFLLASGYSGKRY
Trigger: ATACCTTTTCCCAGAATACCCAGAAGCAAGCAAGAATACAGGTCAGAATAGGGAGGTTTCAATTCTGTATCCAGGGGCCAAAGACCAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 90 bp TCCTTGAAGAGGTCCTTCACATCCCCTGTAAGTTGGATTCCTAACTaGGCATTCGGTGTAGTTTATGAGGTGTCATCCCACATCCATCAT +
Preference number: 5 (lower is better)
Translates to: SLKRSFTSPVSWIPN*AFGVVYEVSSHIHH
Trigger: ATGATGGATGTGGGATGACACCTCATAAACTACACCGAATGCTCAGTTAGGAATCCAACTTACAGGGGATGTGAAGGACCTCTTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS GCA 90 bp CCCCTGGATACAGAATTGAAACCTCCCTATTCTGACCTGTATTCTTaGTTGCTTCTGGGTATTCTGGGAAAAGGTATGGTGGTGTACTTC +
Preference number: 5 (lower is better)
Translates to: PLDTELKPPYSDLYS*LLLGILGKGMVVYF
Trigger: GAAGTACACCACCATACCTTTTCCCAGAATACCCAGAAGCAAGCAAGAATACAGGTCAGAATAGGGAGGTTTCAATTCTGTATCCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 90 bp ACCTGTATTCTTGCTTGCTTCTGGGTATTCTGGGAAAAGGTATGGTaGTGTACTTCTCTCAGAACTCGATTTATCATGGCTGTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: TCILACFWVFWEKVW*CTSLRTRFIMAVLP
Trigger: GGGGAGAACAGCCATGATAAATCGAGTTCTGAGAGAAGTACACCACCATACCTTTTCCCAGAATACCCAGAAGCAAGCAAGAATACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS-3UTR CAA 90 bp TATTGCTTTTCTGACCCTAGACTCTTGAAAGCCTATTTAAACTGGCCTCTTTCTAGAGTACCCCCATTCTaGGTGAAGACAAGGGCGTCC +
Preference number: 5 (lower is better)
Translates to: YCFSDPRLLKAYLNWPLSRVPPF*VKTRAS
Trigger: GGACGCCCTTGTCTTCACCAAGAATGGGGGTACTCT...AGAAAGAGGCCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGAAAAGCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCGGTAGTCACCTTCTTTaGACGCAGAAAAATTTTCAT +
Preference number: 5 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTGSHLL*TQKNFH
Trigger: ATGAAAATTTTTCTGCGTCAAAAGAAGGTGACTACC...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp GATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATACCAGCATCTCCTGTACTTaGGATGGGAATTATAATAAC +
Preference number: 5 (lower is better)
Translates to: DLPPAPCTGSHPLVLSHTSISCT*DGNYNN
Trigger: GTTATTATAATTCCCATCCAAAGTACAGGAGATGCT...GGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATTCACCTAGGATCCATTaGTACTTACTGGAAAACTGT +
Preference number: 5 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHSPRIH*YLLENC
Trigger: ACAGTTTTCCAGTAAGTACAAATGGATCCTAGGTGA...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp TCTGGTGTGGTGCCTTCCTTGAACTTCCTCCCCCAGATCTTCCATGTCATATCTGGTAGTCACCTTCTTTaGACGCAGAAAAATTTTCAT +
Preference number: 5 (lower is better)
Translates to: SGVVPSLNFLPQIFHVISGSHLL*TQKNFH
Trigger: ATGAAAATTTTTCTGCGTCAAAAGAAGGTGACTACC...AGATATGACATGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGCACCACACCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGGTATCATATTCTACATaGGCCAGGCTCTTGGCAATC +
Preference number: 5 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVVSYST*ARLLAI
Trigger: GATTGCCAAGAGCCTGGCCAATGTAGAATATGATAC...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp AATCCAGTATGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTGCAGGTTTTAGGAAATaGCACTCAATGACTCCAATT +
Preference number: 5 (lower is better)
Translates to: NPVCDLPPAPCTGSHPLVAGFRK*HSMTPI
Trigger: AATTGGAGTCATTGAGTGCAATTTCCTAAAACCTGC...AACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACATACTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGTTGGCCTGGCTACAGTaGAGGTCTCAAAATTATCTT +
Preference number: 5 (lower is better)
Translates to: LYIRHKGEGERERERERELAWLQ*RSQNYL
Trigger: AAGATAATTTTGAGACCTCAACTGTAGCCAGGCCAA...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TGTGATTTGCCTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTGAGTCATTTGTTGACTTCTTCTTaGTTTATGGTTGTGCTACCT +
Preference number: 5 (lower is better)
Translates to: CDLPPAPCTGSHPLVLSHLLTSS*FMVVLP
Trigger: AGGTAGCACAACCATAAACAAAGAAGAAGTCAACAA...ATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAGGCAAATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS TCA 90 bp CAAAGTCTTGTTTGTTGTAGGCAGGTTTTAGGAAATTGCACTCAATaGCTCCAATTACTCCTACACCTTCTCCACGAGTTGGCTTCACCT +
Preference number: 5 (lower is better)
Translates to: QSLVCCRQVLGNCTQ*LQLLLHLLHELASP
Trigger: AGGTGAAGCCAACTCGTGGAGAAGGTGTAGGAGTAATTGGAGTCATTGAGTGCAATTTCCTAAAACCTGCCTACAACAAACAAGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 90 bp AACCTCCCTATTCTGACCTGTATTCTTGCTTGCTTCTGGGTATTCTaGGAAAAGGTATGGTGGTGTACTTCTCTCAGAACTCGATTTATC +
Preference number: 5 (lower is better)
Translates to: NLPILTCILACFWVF*EKVWWCTSLRTRFI
Trigger: GATAAATCGAGTTCTGAGAGAAGTACACCACCATACCTTTTCCCAGAATACCCAGAAGCAAGCAAGAATACAGGTCAGAATAGGGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS-3UTR CAA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGGGGCAAGGGCATTTATaGTTAGCCGGTACTCCTTGG +
Preference number: 5 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMGQGHL*LAGTPW
Trigger: CCAAGGAGTACCGGCTAACAATAAATGCCCTTGCCC...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTCAGGAACCTTCGGTATaGGCCTGGCTACAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSQEPSV*AWLQLR
Trigger: CCTCAACTGTAGCCAGGCCAATACCGAAGGTTCCTG...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAAATCCAGTATGTGATTaGCCTCCAGCACCGTGTACA +
Preference number: 5 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKNPVCD*PPAPCT
Trigger: TGTACACGGTGCTGGAGGCAAATCACATACTGGATT...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp ATGGCTAGCCAGTTTTCCCAGCACCATTTATTAGATAGGGAATCCTTTCCCCATTCCTTTCCCCATTGCTaGTTTTTGTCAGGTTTGTCA +
Preference number: 5 (lower is better)
Translates to: MASQFSQHHLLDRESFPHSFPHC*FLSGLS
Trigger: TGACAAACCTGACAAAAACAAGCAATGGGGAAAGGA...ATGGGGAAAGGATTCCCTATCTAATAAATGGTGCTGGGAAAACTGGCTAGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CAA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGGCAGGTTTTAGGAAATaGCACTCAATGACTCCAATT +
Preference number: 5 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVAGFRK*HSMTPI
Trigger: AATTGGAGTCATTGAGTGCAATTTCCTAAAACCTGC...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGTCACCTAGGATCCATTaGTACTTACTGGAAAACTGT +
Preference number: 5 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVSPRIH*YLLENC
Trigger: ACAGTTTTCCAGTAAGTACAAATGGATCCTAGGTGA...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTAATCTAGAGAAGGTGTaGTCATCTCATTCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: RKENRQKIREEKGIQSGANLEKV*SSHSGA
Trigger: GGCTCCAGAATGAGATGACAACACCTTCTCTAGATT...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp CTCTATATAAGGCATAAAGGTGAGGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAAAGGTCCCTTGTaGACTTCTTCTTTGTTTATG +
Preference number: 5 (lower is better)
Translates to: LYIRHKGEGERERERERETKGPL*TSSLFM
Trigger: CATAAACAAAGAAGAAGTCAACAAGGGACCTTTTGT...CTCTCTCTCTCTCTCTCTCTCTCTCTCACCCTCACCTTTATGCCTTATATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGGCTACAAAAGGTCCCTaGTTGACTTCTTCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVATKGP*LTSSLF
Trigger: AAACAAAGAAGAAGTCAACAAGGGACCTTTTGTAGC...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTTCTCCTCATAGCCTCTaGCTTTCTCCCCAATGGCTG +
Preference number: 5 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSSPHSL*LSPQWL
Trigger: CAGCCATTGGGGAGAAAGCAAGAGGCTATGAGGAGA...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TATTGCTTTTCTGACCCTAGACTCTTGAAAGCCTATTTAAACTGGCCTCTTTCTGGCTGCAAACATGAGTaGTACTTGTTAGCTTACCCC +
Preference number: 5 (lower is better)
Translates to: YCFSDPRLLKAYLNWPLSGCKHE*YLLAYP
Trigger: GGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCC...AGAAAGAGGCCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGAAAAGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp ACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCTCCAGTCTATCATTGTaGGACATTTGGCTTGGTTCC +
Preference number: 5 (lower is better)
Translates to: TSTMVELVYSPTNSVKVFSSLSL*DIWLGS
Trigger: GGAACCAAGCCAAATGTCCAACAATGATAGACTGGA...GAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CAA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAAACTGGTTACTATTCTaGCAAGAGAACCCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKNWLLF*QENPKV
Trigger: CACCTTTGGGTTCTCTTGCAAGAATAGTAACCAGTT...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TATTGCTTTTCTGACCCTAGACTCTTGAAAGCCTATTTAAACTGGCCTCTTTCTTTCATCAGTGAGTTCTaGTTCCTCTGGAACAGAGCA +
Preference number: 5 (lower is better)
Translates to: YCFSDPRLLKAYLNWPLSFISEF*FLWNRA
Trigger: TGCTCTGTTCCAGAGGAACAAGAACTCACTGATGAA...AGAAAGAGGCCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGAAAAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp CAGTGTGGCCATGCTCATTCTTTAAGCCTTAATTTAGGTCCCATTTCTGGTGTGTTGTTGACTTCTTCTTaGTTTATGGTTGTGCTACCT +
Preference number: 5 (lower is better)
Translates to: QCGHAHSLSLNLGPISGVLLTSS*FMVVLP
Trigger: AGGTAGCACAACCATAAACAAAGAAGAAGTCAACAA...CACACCAGAAATGGGACCTAAATTAAGGCTTAAAGAATGAGCATGGCCACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATACAGCTCCTCCACCTTTaGCTGGAACAAATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIQLLHL*LEQIPF
Trigger: GAAAGGAATTTGTTCCAGCAAAAGGTGGAGGAGCTG...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAAATCTGGAATTCAGCTaGGCGATAACCCATGTGTTT +
Preference number: 5 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKNLEFS*AITHVF
Trigger: AAACACATGGGTTATCGCCAAGCTGAATTCCAGATT...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp CTCTTTTATTTCATTGAGCAGTGGTTTGTAGTTCTCCTTGAAGAGGTCCTTCACCCCCATTGCTTGTTTTaGTCAGGTTTGTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: LFYFIEQWFVVLLEEVLHPHCLF*SGLSKI
Trigger: GATCTTTGACAAACCTGACAAAAACAAGCAATGGGG...GTGAAGGACCTCTTCAAGGAGAACTACAAACCACTGCTCAATGAAATAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CAA 90 bp ACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCGGAATCCTTTCCCCATaGCTTGTTTTTGTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: TSTMVELVYSPTNSVKVFGILSP*LVFVRF
Trigger: AAACCTGACAAAAACAAGCAATGGGGAAAGGATTCC...GAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CAA 90 bp GTTCCCCTTCGTATGTTCATGTGTTCTCATTGTTCAATTCCCATCTATGAGTCTCATAGTGGTTTTGATTaGCATTTCTCTGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: VPLRMFMCSHCSIPIYESHSGFD*HFSDGQ
Trigger: CTGGCCATCAGAGAAATGCAAATCAAAACCACTATG...AGACTCATAGATGGGAATTGAACAATGAGAACACATGAACATACGAAGGGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CAA 90 bp ATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCCTCTCCAGCACCTGTaGTTTCCTGACTTTTTAATG +
Preference number: 5 (lower is better)
Translates to: MVELVYSPTNSVKVFLFLPLQHL*FPDFLM
Trigger: CATTAAAAAGTCAGGAAACAACAGGTGCTGGAGAGG...GAGAAATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CAA 90 bp ACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCTGTTGGACATTTGGCTaGGTTCCAAGTCTTTGCTAT +
Preference number: 5 (lower is better)
Translates to: TSTMVELVYSPTNSVKVFCWTFG*VPSLCY
Trigger: ATAGCAAAGACTTGGAACCAAGCCAAATGTCCAACA...GAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CAA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAGGTATACTCAAAGTCTaGTTTGTTGTAGGCAGGTTT +
Preference number: 5 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKGILKV*FVVGRF
Trigger: AAACCTGCCTACAACAAACAAGACTTTGAGTATACC...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp ATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAAATAATAGTTAGCCGGTACTCCTaGGTATACTCAAAGTCTTGT +
Preference number: 5 (lower is better)
Translates to: IFEGCKHELYLLAYPKIIVSRYS*VYSKSC
Trigger: ACAAGACTTTGAGTATACCAAGGAGTACCGGCTAAC...TATTATTTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp ACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCTCCTTTGCCCACTTTTaGATGGGGTTGTTTGTTTTT +
Preference number: 5 (lower is better)
Translates to: TSTMVELVYSPTNSVKVFSFAHF*MGLFVF
Trigger: AAAAACAAACAACCCCATCAAAAAGTGGGCAAAGGA...GAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CAA 90 bp AGTATGGCCATTTTCACGATATTGATTCTTCCTACCCATGAGCATGGAATGATCATCATTGTTGGACATTaGGCTTGGTTCCAAGTCTTT +
Preference number: 5 (lower is better)
Translates to: SMAIFTILILPTHEHGMIIIVGH*AWFQVF
Trigger: AAAGACTTGGAACCAAGCCAAATGTCCAACAATGAT...GATCATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS TCA 90 bp ATTCCCTCATATCCAATTGTCTTGTTATTCAATCCAGCCATTTCTTaGACAGTAAGGATCTTTGGTGGATTACTGAATACCTGGTGGTTC +
Preference number: 5 (lower is better)
Translates to: IPSYPIVLLFNPAIS*TVRIFGGLLNTWWF
Trigger: GAACCACCAGGTATTCAGTAATCCACCAAAGATCCTTACTGTTCAAGAAATGGCTGGATTGAATAACAAGACAATTGGATATGAGGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS-3UTR CAA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTTACCAGGATGTCATATaGATCTGTATCAAAGTCCAA +
Preference number: 5 (lower is better)
Translates to: RKENRQKIREEKGIQSGAYQDVI*ICIKVQ
Trigger: TTGGACTTTGATACAGATCAATATGACATCCTGGTA...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp GATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTGTCTTGTTTCTTAGCTTaGCTCAAGCACAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: DLPCHICTTQLYISYTFVSCFLA*LKHRSS
Trigger: TGAAGACCTGTGCTTGAGCAAAGCTAAGAAACAAGA...CACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TGTTACATCTTCGAAGGCTGCAAACATGAGTTGTACTTGTTAGCTTACCCCAAACTCAACAGTTTGTTCTaGTTTCTTAGCTTTGCTCAA +
Preference number: 5 (lower is better)
Translates to: CYIFEGCKHELYLLAYPKLNSLF*FLSFAQ
Trigger: TTGAGCAAAGCTAAGAAACAAGAACAAACTGTTGAG...TTTGGGGTAAGCTAACAAGTACAACTCATGTTTGCAGCCTTCGAAGATGTAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp AGAAAAGAGAACAGACAGAAGATAAGAGAAGAGAAGGGTATACAGTCTGGTGCTCTTCTCCTCAACAGTTaGTTCTTGTTTCTTAGCTTT +
Preference number: 5 (lower is better)
Translates to: RKENRQKIREEKGIQSGALLLNS*FLFLSF
Trigger: AAAGCTAAGAAACAAGAACAAACTGTTGAGGAGAAG...AGCACCAGACTGTATACCCTTCTCTTCTCTTATCTTCTGTCTGTTCTCTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000255495.7
CDS-3UTR CAA 90 bp GATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTGCAATCCAGCCATTTCTaGAACAGTAAGGATCTTTGG +
Preference number: 5 (lower is better)
Translates to: DLPCHICTTQLYISYTFVQSSHF*NSKDLW
Trigger: CCAAAGATCCTTACTGTTCAAGAAATGGCTGGATTG...CACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp AGATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTAATCTAGAGAAGGTGTaGTCATCTCATTCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: RSSMSYLYHSVVHIIHFCNLEKV*SSHSGA
Trigger: GGCTCCAGAATGAGATGACAACACCTTCTCTAGATT...ACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TTTAAACTGGCCTCTTTCTCCACACCAAAACTGATAAAAAGGAGACTGATTATGCTTCTGCCACCAATCTaGGCATCTGATCTTCTAATT +
Preference number: 5 (lower is better)
Translates to: FKLASFSTPKLIKRRLIMLLPPI*ASDLLI
Trigger: AATTAGAAGATCAGATGCCAAGATTGGTGGCAGAAG...CATAATCAGTCTCCTTTTTATCAGTTTTGGTGTGGAGAAAGAGGCCAGTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp AAAACTGATAAAAAGGAGACTGATTATGAGCCAGGATTTACACAGAGATTCTCTTCTTGCTTTTCCTCTTaGGTTCTTTCCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: KTDKKETDYEPGFTQRFSSCFSS*VLSSSA
Trigger: AGCTGAGCTGGAAAGAACCAAAGAGGAAAAGCAAGA...AGAGAATCTCTGTGTAAATCCTGGCTCATAATCAGTCTCCTTTTTATCAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp TATTGCTTTTCTGACCCTAGACTCTTGAAAGCCTATTTAAACTGGCCTCTTTCTCTTCTCCTCAACAGTTaGTTCTTGTTTCTTAGCTTT +
Preference number: 5 (lower is better)
Translates to: YCFSDPRLLKAYLNWPLSLLLNS*FLFLSF
Trigger: AAAGCTAAGAAACAAGAACAAACTGTTGAGGAGAAG...AGAAAGAGGCCAGTTTAAATAGGCTTTCAAGAGTCTAGGGTCAGAAAAGCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp AGAATGATGATTTCCAATTTTATCCATGTCCCTACAAAGGACATGAACTCATCAGCCATTTTCACGATATaGATTCTTCCTACCCATGAG +
Preference number: 5 (lower is better)
Translates to: RMMISNFIHVPTKDMNSSAIFTI*ILPTHE
Trigger: CTCATGGGTAGGAAGAATCAATATCGTGAAAATGGC...TGATGAGTTCATGTCCTTTGTAGGGACATGGATAAAATTGGAAATCATCATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS-3UTR CAA 90 bp GATCTTCCATGTCATATCTGTACCACTCAGTTGTACATATCATACACTTTTGTGTACCAGGATGTCATATaGATCTGTATCAAAGTCCAA +
Preference number: 5 (lower is better)
Translates to: DLPCHICTTQLYISYTFVYQDVI*ICIKVQ
Trigger: TTGGACTTTGATACAGATCAATATGACATCCTGGTA...CACAAAAGTGTATGATATGTACAACTGAGTGGTACAGATATGACATGGAAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS-3UTR CAA 90 bp AGAATGATGATTTCCAATTTTATCCATGTCCCTACAAAGGACATGAACTCATCACATCTCATAGTGGTTTaGATTTGCATTTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: RMMISNFIHVPTKDMNSSHLIVV*ICISLM
Trigger: CATCAGAGAAATGCAAATCAAAACCACTATGAGATG...TGATGAGTTCATGTCCTTTGTAGGGACATGGATAAAATTGGAAATCATCATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS TCA 72 bp GAGCGCGCTCCAGCCACCTGTCCCGGGCGGGAGGGGTaGGGCCGGCTGAGGCAAGCGGCGGCTCCGCCCTGT +
Preference number: 6 (lower is better)
Translates to: ERAPATCPGREG*GRLRQAAAPPC
Trigger: ACAGGGCGGAGCCGCCGCTTGCCTCAGCCGGCCTCACCCCTCCCGCCCGGGACAGGTGGCTGGAGCGCGCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355610.9
CDS TCA 72 bp GATCTACAGCATTATCTAGCAGCTCCGCGATGGCACTaGAGGGTCGCGTGTGGCTGCTGGAGTTGCTCTGGA +
Preference number: 6 (lower is better)
Translates to: DLQHYLAAPRWH*RVACGCWSCSG
Trigger: TCCAGAGCAACTCCAGCAGCCACACGCGACCCTTCAGTGCCATCGCGGAGCTGCTAGATAATGCTGTAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 72 bp CAAGGGCGTCCTTTCCTAGCCGCATGGAGCCTGACTTaGAACCATTACCAAAGACCCCAATGGGACACTGGC +
Preference number: 6 (lower is better)
Translates to: QGRPFLAAWSLT*NHYQRPQWDTG
Trigger: GCCAGTGTCCCATTGGGGTCTTTGGTAATGGTTTCAAGTCAGGCTCCATGCGGCTAGGAAAGGACGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS GCA 72 bp GCTCTCCTCATAGCCTCTTGCTTTCTCCCCAATGGCTaGAGCAGGGATTGCAGCAGAGGCCACAGAATAAGG +
Preference number: 6 (lower is better)
Translates to: ALLIASCFLPNG*SRDCSRGHRIR
Trigger: CCTTATTCTGTGGCCTCTGCTGCAATCCCTGCTGCAGCCATTGGGGAGAAAGCAAGAGGCTATGAGGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 72 bp CTCCAGCACCGTGTACAGGATCCCATCCACTTGTTCTaGGTCATACCCGATCTCACGAAGCTCCAAGTGAGG +
Preference number: 6 (lower is better)
Translates to: LQHRVQDPIHLF*VIPDLTKLQVR
Trigger: CCTCACTTGGAGCTTCGTGAGATCGGGTATGACTCAGAACAAGTGGATGGGATCCTGTACACGGTGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255495.7
ENST00000355610.9
ENST00000478924.1
CDS CAA 72 bp ACAAGGGCGTCCTTTCCTAGCCGCATGGAGCCTGACTaGAAACCATTACCAAAGACCCCAATGGGACACTGG +
Preference number: 6 (lower is better)
Translates to: TRASFPSRMEPD*KPLPKTPMGHW
Trigger: CCAGTGTCCCATTGGGGTCTTTGGTAATGGTTTCAAGTCAGGCTCCATGCGGCTAGGAAAGGACGCCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 72 bp AGCAGGGATTGCAGCAGAGGCCACAGAATAAGGCACTaGGTTCCAGGATTCAACTGCTTTTCGTCTCTCAGC +
Preference number: 6 (lower is better)
Translates to: SRDCSRGHRIRH*VPGFNCFSSLS
Trigger: GCTGAGAGACGAAAAGCAGTTGAATCCTGGAACCCAGTGCCTTATTCTGTGGCCTCTGCTGCAATCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp CTGCGGATGTTCCAAATGAGAACACGAGTGCCTTTTTaGCCTGGGATGGCATCAAACTGGGCCAGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: LRMFQMRTRVPF*PGMASNWASRS
Trigger: TGACCTGCTGGCCCAGTTTGATGCCATCCCAGGCAAAAAAGGCACTCGTGTTCTCATTTGGAACATCCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 90 bp GAAGCAGGGACCCCTGGCGTTGGTCTTTGGCCCCTGGATACAGAATaGAAACCTCCCTATTCTGACCTGTATTCTTGCTTGCTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: EAGTPGVGLWPLDTE*KPPYSDLYSCLLLG
Trigger: ACCCAGAAGCAAGCAAGAATACAGGTCAGAATAGGGAGGTTTCAATTCTGTATCCAGGGGCCAAAGACCAACGCCAGGGGTCCCTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 90 bp TTGGTGAAGACAAGGGCGTCCTTTCCTAGCCGCATGGAGCCTGACTaGAAACCATTACCAAAGACCCCAATGGGACACTGGCTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: LVKTRASFPSRMEPD*KPLPKTPMGHWLFF
Trigger: AAAGAAGAGCCAGTGTCCCATTGGGGTCTTTGGTAATGGTTTCAAGTCAGGCTCCATGCGGCTAGGAAAGGACGCCCTTGTCTTCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS GCA 72 bp TCTGGAATTCAGCTTGGCGATAACCCATGTGTTTCTTaGTCCAGTACAAGCCTTCCGCCTCCTGGGTACTGT +
Preference number: 6 (lower is better)
Translates to: SGIQLGDNPCVS*SSTSLPPPGYC
Trigger: ACAGTACCCAGGAGGCGGAAGGCTTGTACTGGAGCAAGAAACACATGGGTTATCGCCAAGCTGAATTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255495.7
ENST00000355610.9
ENST00000478924.1
CDS CCA 72 bp CTCAGAACTCGATTTATCATGGCTGTTCTCCCCTTCTaGGTAGGCAACAGGTGCTTCTACCCTCCTGTAAGG +
Preference number: 6 (lower is better)
Translates to: LRTRFIMAVLPF*VGNRCFYPPVR
Trigger: CCTTACAGGAGGGTAGAAGCACCTGTTGCCTACCCAGAAGGGGAGAACAGCCATGATAAATCGAGTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 72 bp ATTCTTCAGGAAGCAGGGACCCCTGGCGTTGGTCTTTaGCCCCTGGATACAGAATTGAAACCTCCCTATTCT +
Preference number: 6 (lower is better)
Translates to: ILQEAGTPGVGL*PLDTELKPPYS
Trigger: AGAATAGGGAGGTTTCAATTCTGTATCCAGGGGCCAAAGACCAACGCCAGGGGTCCCTGCTTCCTGAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 72 bp TCTTCTAATTCTTCAGGAAGCAGGGACCCCTGGCGTTaGTCTTTGGCCCCTGGATACAGAATTGAAACCTCC +
Preference number: 6 (lower is better)
Translates to: SSNSSGSRDPWR*SLAPGYRIETS
Trigger: GGAGGTTTCAATTCTGTATCCAGGGGCCAAAGACCAACGCCAGGGGTCCCTGCTTCCTGAAGAATTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp TGTGATAGAAGTCCAACAGTGAGAGTACCCCCATTCTaGGTGAAGACAAGGGCGTCCTTTCCTAGCCGCATG +
Preference number: 6 (lower is better)
Translates to: CDRSPTVRVPPF*VKTRASFPSRM
Trigger: CATGCGGCTAGGAAAGGACGCCCTTGTCTTCACCAAGAATGGGGGTACTCTCACTGTTGGACTTCTATCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp TTGGTGTATTATGACCTTCGCTCTCCTCATAGCCTCTaGCTTTCTCCCCAATGGCTGCAGCAGGGATTGCAG +
Preference number: 6 (lower is better)
Translates to: LVYYDLRSPHSL*LSPQWLQQGLQ
Trigger: CTGCAATCCCTGCTGCAGCCATTGGGGAGAAAGCAAGAGGCTATGAGGAGAGCGAAGGTCATAATACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp ACCCCTGGCGTTGGTCTTTGGCCCCTGGATACAGAATaGAAACCTCCCTATTCTGACCTGTATTCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: TPGVGLWPLDTE*KPPYSDLYSCL
Trigger: CAAGCAAGAATACAGGTCAGAATAGGGAGGTTTCAATTCTGTATCCAGGGGCCAAAGACCAACGCCAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 72 bp CTCTCTGTTAAAAGGGATCAGCTGAATGGGAGCTCCTaGATCTCTAACACCTTTGGCAACACCCACAACAGC +
Preference number: 6 (lower is better)
Translates to: LSVKRDQLNGSS*ISNTFGNTHNS
Trigger: GCTGTTGTGGGTGTTGCCAAAGGTGTTAGAGATTCAGGAGCTCCCATTCAGCTGATCCCTTTTAACAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 72 bp CTCTCAGCAAGCTCCTCTCTGTTAAAAGGGATCAGCTaGATGGGAGCTCCTGAATCTCTAACACCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: LSASSSLLKGIS*MGAPESLTPLA
Trigger: TGCCAAAGGTGTTAGAGATTCAGGAGCTCCCATTCAGCTGATCCCTTTTAACAGAGAGGAGCTTGCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS GCA 72 bp GGCCACAGAATAAGGCACTGGGTTCCAGGATTCAACTaGTTTTCGTCTCTCAGCAAGCTCCTCTCTGTTAAA +
Preference number: 6 (lower is better)
Translates to: GHRIRHWVPGFN*FSSLSKLLSVK
Trigger: TTTAACAGAGAGGAGCTTGCTGAGAGACGAAAAGCAGTTGAATCCTGGAACCCAGTGCCTTATTCTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 90 bp GTACAAGCCTTCCGCCTCCTGGGTACTGTAGATCACCAATTCATGTaGGACTTTCTTGAATTCAGACTGCCAGTGATTCCTCTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: VQAFRLLGTVDHQFM*DFLEFRLPVIPLLF
Trigger: GAACAGGAGAGGAATCACTGGCAGTCTGAATTCAAGAAAGTCCAACATGAATTGGTGATCTACAGTACCCAGGAGGCGGAAGGCTTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255495.7
ENST00000355610.9
ENST00000478924.1
CDS CAA 90 bp CTCTTTGGTTCTTTCCAGCTCAGCTTTCAGAATCTGGAATTCAGCTaGGCGATAACCCATGTGTTTCTTGCTCCAGTACAAGCCTTCCGC +
Preference number: 6 (lower is better)
Translates to: LFGSFQLSFQNLEFS*AITHVFLAPVQAFR
Trigger: GCGGAAGGCTTGTACTGGAGCAAGAAACACATGGGTTATCGCCAAGCTGAATTCCAGATTCTGAAAGCTGAGCTGGAAAGAACCAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255495.7
ENST00000355610.9
ENST00000478924.1
CDS TCA 72 bp TGGCATCAAACTGGGCCAGCAGGTCATTTTCACGGTTaGAAATGGAATAGTTCAAGATGGCTTCTAGGCTGG +
Preference number: 6 (lower is better)
Translates to: WHQTGPAGHFHG*KWNSSRWLLGW
Trigger: CCAGCCTAGAAGCCATCTTGAACTATTCCATTTTCAACCGTGAAAATGACCTGCTGGCCCAGTTTGATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 72 bp AGGTCCTTCACATCCCCTGTAAGTTGGATTCCTAACTaGGCATTCGGTGTAGTTTATGAGGTGTCATCCCAC +
Preference number: 6 (lower is better)
Translates to: RSFTSPVSWIPN*AFGVVYEVSSH
Trigger: GTGGGATGACACCTCATAAACTACACCGAATGCTCAGTTAGGAATCCAACTTACAGGGGATGTGAAGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604604.1
CDS TCA 72 bp TCTGTAAAGCCAAAGCTGAGCATTCGGTGTAGTTTATaGGGTGTCATCCCACATCCATCATCGGTAAAGGTC +
Preference number: 6 (lower is better)
Translates to: SVKPKLSIRCSL*GVIPHPSSVKV
Trigger: GACCTTTACCGATGATGGATGTGGGATGACACCTCATAAACTACACCGAATGCTCAGCTTTGGCTTTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS GCA 72 bp AGAAAGCACAACGCCACCAAGCACAGGGAGACTGGCTaGAGCTTTCTAAGAAGTAATTACTCAATTCTTGGT +
Preference number: 6 (lower is better)
Translates to: RKHNATKHRETG*SFLRSNYSILG
Trigger: ACCAAGAATTGAGTAATTACTTCTTAGAAAGCTGCAGCCAGTCTCCCTGTGCTTGGTGGCGTTGTGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478924.1
CDS CCA 72 bp CAAGCACAGGTCTTCATCAGTGAGTTCTTGTTCCTCTaGAACAGAGCATCTCCTGTACTTTGGATGGGAATT +
Preference number: 6 (lower is better)
Translates to: QAQVFISEFLFL*NRASPVLWMGI
Trigger: AATTCCCATCCAAAGTACAGGAGATGCTCTGTTCCAGAGGAACAAGAACTCACTGATGAAGACCTGTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp TTCCGCCTCCTGGGTACTGTAGATCACCAATTCATGTaGGACTTTCTTGAATTCAGACTGCCAGTGATTCCT +
Preference number: 6 (lower is better)
Translates to: FRLLGTVDHQFM*DFLEFRLPVIP
Trigger: AGGAATCACTGGCAGTCTGAATTCAAGAAAGTCCAACATGAATTGGTGATCTACAGTACCCAGGAGGCGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255495.7
ENST00000355610.9
ENST00000478924.1
CDS TCA 72 bp TGGCAACACCCACAACAGCTACAAAAGGTCCCTTGTTaGCTTCTTCTTTGTTTATGGTTGTGCTACCTCTGT +
Preference number: 6 (lower is better)
Translates to: WQHPQQLQKVPC*LLLCLWLCYLC
Trigger: ACAGAGGTAGCACAACCATAAACAAAGAAGAAGTCAACAAGGGACCTTTTGTAGCTGTTGTGGGTGTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 72 bp CTTGCTTGCTTCTGGGTATTCTGGGAAAAGGTATGGTaGTGTACTTCTCTCAGAACTCGATTTATCATGGCT +
Preference number: 6 (lower is better)
Translates to: LACFWVFWEKVW*CTSLRTRFIMA
Trigger: AGCCATGATAAATCGAGTTCTGAGAGAAGTACACCACCATACCTTTTCCCAGAATACCCAGAAGCAAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 72 bp CTTCAATTCTTCCAGCTCTCTCTGGTTCTTCAACTTTaGTGTATTATGACCTTCGCTCTCCTCATAGCCTCT +
Preference number: 6 (lower is better)
Translates to: LQFFQLSLVLQL*CIMTFALLIAS
Trigger: AGAGGCTATGAGGAGAGCGAAGGTCATAATACACCAAAGTTGAAGAACCAGAGAGAGCTGGAAGAATTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp CAGGCTCTTGGCAATCATCTGGGTAGTCACCTTCTTTaGACGCAGAAAAATTTTCATGCGTGGCTTCATGTA +
Preference number: 6 (lower is better)
Translates to: QALGNHLGSHLL*TQKNFHAWLHV
Trigger: TACATGAAGCCACGCATGAAAATTTTTCTGCGTCAAAAGAAGGTGACTACCCAGATGATTGCCAAGAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp CCTTTGGCAACACCCACAACAGCTACAAAAGGTCCCTaGTTGACTTCTTCTTTGTTTATGGTTGTGCTACCT +
Preference number: 6 (lower is better)
Translates to: PLATPTTATKGP*LTSSLFMVVLP
Trigger: AGGTAGCACAACCATAAACAAAGAAGAAGTCAACAAGGGACCTTTTGTAGCTGTTGTGGGTGTTGCCAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 90 bp TTGTTTCTTAGCTTTGCTCAAGCACAGGTCTTCATCAGTGAGTTCTaGTTCCTCTGGAACAGAGCATCTCCTGTACTTTGGATGGGAATT +
Preference number: 6 (lower is better)
Translates to: LFLSFAQAQVFISEF*FLWNRASPVLWMGI
Trigger: AATTCCCATCCAAAGTACAGGAGATGCTCTGTTCCAGAGGAACAAGAACTCACTGATGAAGACCTGTGCTTGAGCAAAGCTAAGAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 90 bp CTGGATACAGAATTGAAACCTCCCTATTCTGACCTGTATTCTTGCTaGCTTCTGGGTATTCTGGGAAAAGGTATGGTGGTGTACTTCTCT +
Preference number: 6 (lower is better)
Translates to: LDTELKPPYSDLYSC*LLGILGKGMVVYFS
Trigger: AGAGAAGTACACCACCATACCTTTTCCCAGAATACCCAGAAGCAAGCAAGAATACAGGTCAGAATAGGGAGGTTTCAATTCTGTATCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 90 bp GCAACACCCACAACAGCTACAAAAGGTCCCTTGTTGACTTCTTCTTaGTTTATGGTTGTGCTACCTCTGTTAGATTCTTCTGCCACCAAT +
Preference number: 6 (lower is better)
Translates to: ATPTTATKGPLLTSS*FMVVLPLLDSSATN
Trigger: ATTGGTGGCAGAAGAATCTAACAGAGGTAGCACAACCATAAACAAAGAAGAAGTCAACAAGGGACCTTTTGTAGCTGTTGTGGGTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 72 bp GTTTGTTGTAGGCAGGTTTTAGGAAATTGCACTCAATaGCTCCAATTACTCCTACACCTTCTCCACGAGTTG +
Preference number: 6 (lower is better)
Translates to: VCCRQVLGNCTQ*LQLLLHLLHEL
Trigger: CAACTCGTGGAGAAGGTGTAGGAGTAATTGGAGTCATTGAGTGCAATTTCCTAAAACCTGCCTACAACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 72 bp ATTCTGACCTGTATTCTTGCTTGCTTCTGGGTATTCTaGGAAAAGGTATGGTGGTGTACTTCTCTCAGAACT +
Preference number: 6 (lower is better)
Translates to: ILTCILACFWVF*EKVWWCTSLRT
Trigger: AGTTCTGAGAGAAGTACACCACCATACCTTTTCCCAGAATACCCAGAAGCAAGCAAGAATACAGGTCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 90 bp GTCATCCCACATCCATCATCGGTAAAGGTCAAACAAGATTTATTCTaGACCTCCTCAACATCTATAAAGACCGTCCTGGCAGATACATCT +
Preference number: 6 (lower is better)
Translates to: VIPHPSSVKVKQDLF*TSSTSIKTVLADTS
Trigger: AGATGTATCTGCCAGGACGGTCTTTATAGATGTTGAGGAGGTCAAGAATAAATCTTGTTTGACCTTTACCGATGATGGATGTGGGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 90 bp TCTCTAACACCTTTGGCAACACCCACAACAGCTACAAAAGGTCCCTaGTTGACTTCTTCTTTGTTTATGGTTGTGCTACCTCTGTTAGAT +
Preference number: 6 (lower is better)
Translates to: SLTPLATPTTATKGP*LTSSLFMVVLPLLD
Trigger: ATCTAACAGAGGTAGCACAACCATAAACAAAGAAGAAGTCAACAAGGGACCTTTTGTAGCTGTTGTGGGTGTTGCCAAAGGTGTTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp CATCCATCATCGGTAAAGGTCAAACAAGATTTATTCTaGACCTCCTCAACATCTATAAAGACCGTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: HPSSVKVKQDLF*TSSTSIKTVLA
Trigger: TGCCAGGACGGTCTTTATAGATGTTGAGGAGGTCAAGAATAAATCTTGTTTGACCTTTACCGATGATGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255495.7
ENST00000355610.9
ENST00000604604.1
CDS CAA 72 bp TTTGTGAAGGTAGGTTTATATGTATCATATTCTACATaGGCCAGGCTCTTGGCAATCATCTGGGTAGTCACC +
Preference number: 6 (lower is better)
Translates to: FVKVGLYVSYST*ARLLAIIWVVT
Trigger: GGTGACTACCCAGATGATTGCCAAGAGCCTGGCCAATGTAGAATATGATACATATAAACCTACCTTCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 72 bp CAATCCAGCCATTTCTTGAACAGTAAGGATCTTTGGTaGATTACTGAATACCTGGTGGTTCTCATTTTCCAT +
Preference number: 6 (lower is better)
Translates to: QSSHFLNSKDLW*ITEYLVVLIFH
Trigger: ATGGAAAATGAGAACCACCAGGTATTCAGTAATCCACCAAAGATCCTTACTGTTCAAGAAATGGCTGGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp TTCTTCTCCTCAACAGTTTGTTCTTGTTTCTTAGCTTaGCTCAAGCACAGGTCTTCATCAGTGAGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: FFSSTVCSCFLA*LKHRSSSVSSC
Trigger: ACAAGAACTCACTGATGAAGACCTGTGCTTGAGCAAAGCTAAGAAACAAGAACAAACTGTTGAGGAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CCA 72 bp ATTCAATCCAGCCATTTCTTGAACAGTAAGGATCTTTaGTGGATTACTGAATACCTGGTGGTTCTCATTTTC +
Preference number: 6 (lower is better)
Translates to: IQSSHFLNSKDL*WITEYLVVLIF
Trigger: GAAAATGAGAACCACCAGGTATTCAGTAATCCACCAAAGATCCTTACTGTTCAAGAAATGGCTGGATTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp ACAACAGCTACAAAAGGTCCCTTGTTGACTTCTTCTTaGTTTATGGTTGTGCTACCTCTGTTAGATTCTTCT +
Preference number: 6 (lower is better)
Translates to: TTATKGPLLTSS*FMVVLPLLDSS
Trigger: AGAAGAATCTAACAGAGGTAGCACAACCATAAACAAAGAAGAAGTCAACAAGGGACCTTTTGTAGCTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 90 bp AATTCCCTCATATCCAATTGTCTTGTTATTCAATCCAGCCATTTCTaGAACAGTAAGGATCTTTGGTGGATTACTGAATACCTGGTGGTT +
Preference number: 6 (lower is better)
Translates to: NSLISNCLVIQSSHF*NSKDLWWITEYLVV
Trigger: AACCACCAGGTATTCAGTAATCCACCAAAGATCCTTACTGTTCAAGAAATGGCTGGATTGAATAACAAGACAATTGGATATGAGGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 72 bp TCTTCTGTGTCAAAGTCTGATACCAGGATGTCATATTaGTCTGTATCAAAGTCCAACTCAGATTTTCCATTT +
Preference number: 6 (lower is better)
Translates to: SSVSKSDTRMSY*SVSKSNSDFPF
Trigger: AAATGGAAAATCTGAGTTGGACTTTGATACAGATCAATATGACATCCTGGTATCAGACTTTGACACAGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS TCA 72 bp TATCCAATTGTCTTGTTATTCAATCCAGCCATTTCTTaGACAGTAAGGATCTTTGGTGGATTACTGAATACC +
Preference number: 6 (lower is better)
Translates to: YPIVLLFNPAIS*TVRIFGGLLNT
Trigger: GGTATTCAGTAATCCACCAAAGATCCTTACTGTTCAAGAAATGGCTGGATTGAATAACAAGACAATTGGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9
CDS CAA 72 bp ATATCCAATTGTCTTGTTATTCAATCCAGCCATTTCTaGAACAGTAAGGATCTTTGGTGGATTACTGAATAC +
Preference number: 6 (lower is better)
Translates to: ISNCLVIQSSHF*NSKDLWWITEY
Trigger: GTATTCAGTAATCCACCAAAGATCCTTACTGTTCAAGAAATGGCTGGATTGAATAACAAGACAATTGGATAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255495.7
ENST00000355610.9