RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MON2 (Homo sapiens)

Ensembl gene IDs: ENSG00000061987

Ensembl transcript IDs: ENST00000393629.6, ENST00000393630.8, ENST00000546600.5, ENST00000547095.5, ENST00000547287.1, ENST00000549286.1, ENST00000549378.5, ENST00000549539.1, ENST00000551307.5, ENST00000552115.5, ENST00000552738.5, ENST00000641654.1

Found 966 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGACTCCAAGCACTAATGGCCATCCAGGCCCAAGACTGTCTCCCTaGCTCTGCAGAATCTGCAACACGCATTCTAACTGCTTGAGTCGA +
Preference number: 1 (lower is better)
Translates to: MTPSTNGHPGPRLSP*LCRICNTHSNCLSR
Trigger: TCGACTCAAGCAGTTAGAATGCGTGTTGCAGATTCTGCAGAGTCAGGGAGACAGTCTTGGGCCTGGATGGCCATTAGTGCTTGGAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR GCA 90 bp GCTAGTTCTGGCCACATACTGTCAAATTTTCCAGAAGAAGCATGCTaGCGGGCAACAGGTAGCCCAATAGAAAGAACTCTGAGGAGAGAG +
Preference number: 1 (lower is better)
Translates to: ASSGHILSNFPEEAC*RATGSPIERTLRRE
Trigger: CTCTCTCCTCAGAGTTCTTTCTATTGGGCTACCTGTTGCCCGGCAGCATGCTTCTTCTGGAAAATTTGACAGTATGTGGCCAGAACTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 90 bp ACGTCTCAGCCCATTGCTTCTCGGCGGTGTCCCTTGAATGATGAATaGGAATATTGCCACCTCCAGACTCAATCTTTTCTTTGTCTGCAG +
Preference number: 1 (lower is better)
Translates to: TSQPIASRRCPLNDE*EYCHLQTQSFLCLQ
Trigger: CTGCAGACAAAGAAAAGATTGAGTCTGGAGGTGGCAATATTCTCATTCATCATTCAAGGGACACCGCCGAGAAGCAATGGGCTGAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR GCA 90 bp TGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAAAACAGAGTTTaGCCTGCACTCTTCCTGACAGCAGGACGGGGATCCACACATAGT +
Preference number: 1 (lower is better)
Translates to: CCNKVPCAPIVENRV*PALFLTAGRGSTHS
Trigger: ACTATGTGTGGATCCCCGTCCTGCTGTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTACAATTGGTGCGCATGGAACTTTATTACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR GCA 90 bp TTGGCTAGTTCTGGCCACATACTGTCAAATTTTCCAGAAGAAGCATaGTGCCGGGCAACAGGTAGCCCAATAGAAAGAACTCTGAGGAGA +
Preference number: 1 (lower is better)
Translates to: LASSGHILSNFPEEA*CRATGSPIERTLRR
Trigger: TCTCCTCAGAGTTCTTTCTATTGGGCTACCTGTTGCCCGGCAGCATGCTTCTTCTGGAAAATTTGACAGTATGTGGCCAGAACTAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 90 bp ATTCCAAGGGTGGCACAGTTAGGGACTCCTGTAAGTGTTCTGCCTTaGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGTT +
Preference number: 1 (lower is better)
Translates to: IPRVAQLGTPVSVLP*LDRLHLQQSLENLV
Trigger: AACCAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACTTACAGGAGTCCCTAACTGTGCCACCCTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CCA 90 bp CTCCTGGCATCGAATACTTTCACACACCCCAGTTCTTCTAGTCACTaGAGAACCCAATTCATACTAACAAGACAAGGGCAATGTGTTCCA +
Preference number: 1 (lower is better)
Translates to: LLASNTFTHPSSSSH*RTQFILTRQGQCVP
Trigger: TGGAACACATTGCCCTTGTCTTGTTAGTATGAATTGGGTTCTCCAGTGACTAGAAGAACTGGGGTGTGTGAAAGTATTCGATGCCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CCA 90 bp AATCCTGCTGTTCTGTCGACTGTGTTGGTGAAGAACCTTCTTCAGTaGTGGTTTGACATTCTGTTTCAAGCTCTCCTAGCTCTCCTTCAA +
Preference number: 1 (lower is better)
Translates to: NPAVLSTVLVKNLLQ*WFDILFQALLALLQ
Trigger: TTGAAGGAGAGCTAGGAGAGCTTGAAACAGAATGTCAAACCACCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 90 bp AGTACAATTAGGAAGGTTTCAATTGACCTCTGGGTGACCTCTGGGTaGACCAATCACACAGACACCAAATACACTCCAGAAAGACTCAGA +
Preference number: 1 (lower is better)
Translates to: STIRKVSIDLWVTSG*TNHTDTKYTPERLR
Trigger: TCTGAGTCTTTCTGGAGTGTATTTGGTGTCTGTGTGATTGGTTCACCCAGAGGTCACCCAGAGGTCAATTGAAACCTTCCTAATTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR GCA 90 bp GCCAAGACAAGTTGCCATGATGTTCCAAGAACAGCCCCATGGCAATaGGCCAAGTTAAGTAAAGTCCTCATACACTGGATATTTTTGGAA +
Preference number: 1 (lower is better)
Translates to: AKTSCHDVPRTAPWQ*AKLSKVLIHWIFLE
Trigger: TTCCAAAAATATCCAGTGTATGAGGACTTTACTTAACTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGCAACTTGTCTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR GCA 90 bp TTCCAGATAACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATaGGCACCAATTGTAGAAAACAGAGTTTGCCCTGCACTCTTCCTG +
Preference number: 1 (lower is better)
Translates to: FQITVCQVECCNKVP*APIVENRVCPALFL
Trigger: CAGGAAGAGTGCAGGGCAAACTCTGTTTTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 90 bp AGAGTTGCCAAGACAAGTTGCCATGATGTTCCAAGAACAGCCCCATaGCAATGCGCCAAGTTAAGTAAAGTCCTCATACACTGGATATTT +
Preference number: 1 (lower is better)
Translates to: RVAKTSCHDVPRTAP*QCAKLSKVLIHWIF
Trigger: AAATATCCAGTGTATGAGGACTTTACTTAACTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGCAACTTGTCTTGGCAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 90 bp AAGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTaGAAACTTGGTTGCCCATCTGAATTATTCTGTATTTGGGGAGAA +
Preference number: 1 (lower is better)
Translates to: KCSALARQTSPTAVS*KLGCPSELFCIWGE
Trigger: TTCTCCCCAAATACAGAATAATTCAGATGGGCAACCAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR TCA 90 bp ATCAATACCATAGTACAATTAGGAAGGTTTCAATTGACCTCTGGGTaGCCTCTGGGTGAACCAATCACACAGACACCAAATACACTCCAG +
Preference number: 1 (lower is better)
Translates to: INTIVQLGRFQLTSG*PLGEPITQTPNTLQ
Trigger: CTGGAGTGTATTTGGTGTCTGTGTGATTGGTTCACCCAGAGGTCACCCAGAGGTCAATTGAAACCTTCCTAATTGTACTATGGTATTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR TCA 90 bp GACATTCTGTTTCAAGCTCTCCTAGCTCTCCTTCAATCATACTTGTaGTTCCACGAACAAGGTCTAGCAAACAATGGAATGCCACAGACA +
Preference number: 1 (lower is better)
Translates to: DILFQALLALLQSYL*FHEQGLANNGMPQT
Trigger: TGTCTGTGGCATTCCATTGTTTGCTAGACCTTGTTCGTGGAATCACAAGTATGATTGAAGGAGAGCTAGGAGAGCTTGAAACAGAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 90 bp TGTTCTGTCGACTGTGTTGGTGAAGAACCTTCTTCAGTGGTGGTTTaGCATTCTGTTTCAAGCTCTCCTAGCTCTCCTTCAATCATACTT +
Preference number: 1 (lower is better)
Translates to: CSVDCVGEEPSSVVV*HSVSSSPSSPSIIL
Trigger: AAGTATGATTGAAGGAGAGCTAGGAGAGCTTGAAACAGAATGTCAAACCACCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 90 bp TTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCCTaGTATGGGCCCTATAAGAACAGGCACAGGTACATTAACTACAGG +
Preference number: 1 (lower is better)
Translates to: FFSNGICSYKWPAHA*YGPYKNRHRYINYR
Trigger: CCTGTAGTTAATGTACCTGTGCCTGTTCTTATAGGGCCCATATCAGGCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 90 bp AGGGCAATGTGTTCCATGCCAGCAATCAATTACTGTAGTGACTCTTaGAGGGTGACAGGAAATATTCTGGAGGAAAATCCTGTCCAATTA +
Preference number: 1 (lower is better)
Translates to: RAMCSMPAINYCSDS*RVTGNILEENPVQL
Trigger: TAATTGGACAGGATTTTCCTCCAGAATATTTCCTGTCACCCTCCAAGAGTCACTACAGTAATTGATTGCTGGCATGGAACACATTGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR TCA 90 bp TTATTAATCATACAATTGGTGGCATATGTCTGTTGTCCAGCAATATaGATAAAACAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGG +
Preference number: 1 (lower is better)
Translates to: LLIIQLVAYVCCPAI*IKQALAVTASDDVR
Trigger: CCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTGTTTTATTCATATTGCTGGACAACAGACATATGCCACCAATTGTATGATTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR GCA 90 bp TTCCAGCTGTCCATACTGTGGAGGTTTACAGGAAAATTCTACAAATaGCAACAACTGGTCAAATATAGCTGGATACATTATCTGCATGTT +
Preference number: 1 (lower is better)
Translates to: FQLSILWRFTGKFYK*QQLVKYSWIHYLHV
Trigger: AACATGCAGATAATGTATCCAGCTATATTTGACCAGTTGTTGGCATTTGTAGAATTTTCCTGTAAACCTCCACAGTATGGACAGCTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 90 bp CCATACTGTGGAGGTTTACAGGAAAATTCTACAAATGCCAACAACTaGTCAAATATAGCTGGATACATTATCTGCATGTTTTCTGGTCCT +
Preference number: 1 (lower is better)
Translates to: PYCGGLQENSTNANN*SNIAGYIICMFSGP
Trigger: AGGACCAGAAAACATGCAGATAATGTATCCAGCTATATTTGACCAGTTGTTGGCATTTGTAGAATTTTCCTGTAAACCTCCACAGTATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 90 bp TCCATCATATTTATAGCAATCCCATTTTGTGAGCATCTTGGCTGCTaGATCCCGTGTATTCATAAAGACAGTAGGAGTTATAGTCACAAT +
Preference number: 1 (lower is better)
Translates to: SIIFIAIPFCEHLGC*IPCIHKDSRSYSHN
Trigger: ATTGTGACTATAACTCCTACTGTCTTTATGAATACACGGGATTCAGCAGCCAAGATGCTCACAAAATGGGATTGCTATAAATATGATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR TCA 90 bp AGAATCTGCAACACGCATTCTAACTGCTTGAGTCGAATATCTGGATaGTTAATATTGGACATCTCCTTTAACGGGTTCAATAAAAGCAAC +
Preference number: 1 (lower is better)
Translates to: RICNTHSNCLSRISG*LILDISFNGFNKSN
Trigger: GTTGCTTTTATTGAACCCGTTAAAGGAGATGTCCAATATTAATCATCCAGATATTCGACTCAAGCAGTTAGAATGCGTGTTGCAGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 90 bp AATAAAAGCAACTGCAGCCTCTGGTTTTGTGAGAGTGGAGGATCATaGTTAAATGTTAATCCTGCTTTAATAAGAGAAGTTAAAGCTTCT +
Preference number: 1 (lower is better)
Translates to: NKSNCSLWFCESGGS*LNVNPALIREVKAS
Trigger: AGAAGCTTTAACTTCTCTTATTAAAGCAGGATTAACATTTAACCATGATCCTCCACTCTCACAAAACCAGAGGCTGCAGTTGCTTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 90 bp TTTACAGGAAAATTCTACAAATGCCAACAACTGGTCAAATATAGCTaGATACATTATCTGCATGTTTTCTGGTCCTACACAAATGGCCTT +
Preference number: 1 (lower is better)
Translates to: FTGKFYKCQQLVKYS*IHYLHVFWSYTNGL
Trigger: AAGGCCATTTGTGTAGGACCAGAAAACATGCAGATAATGTATCCAGCTATATTTGACCAGTTGTTGGCATTTGTAGAATTTTCCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGGCGGGCAGATCACCTaGGGTCAGGAGTTCAAGACT +
Preference number: 2 (lower is better)
Translates to: QALAVTASDDVRLKTHGIGGQIT*GQEFKT
Trigger: AGTCTTGAACTCCTGACCTCAGGTGATCTGCCCGCC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR TCA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCCCAAACATAGCTGAGTaGTCTTCGGTTCCTTGGTTC +
Preference number: 2 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPPNIAE*SSVPWF
Trigger: GAACCAAGGAACCGAAGATCACTCAGCTATGTTTGG...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAGGGGGCCACCCACTTaGTTCACACTAAGACTGGCA +
Preference number: 2 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLRGPPT*FTLRLA
Trigger: TGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTCCGGGAAGCAGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: NKHLRALQIASVIQQGHSPGSRG*SEPRSC
Trigger: GCACGATCTTGGCTCACTGCAACCTCTGCTTCCCGG...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCTCAGCATTAACCAACTaGCAAAGATCCTGGAAAAGC +
Preference number: 2 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPSALTN*QRSWKS
Trigger: GCTTTTCCAGGATCTTTGTCAGTTGGTTAATGCTGA...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp AGACTCAATCTTTTCTTTGTCTGCAGTGGTAGAGGACTCTCGAACTCTGTCCAGGGCATCAAGAAGGAGTaGGAGTGCAGCAAGAAGACC +
Preference number: 2 (lower is better)
Translates to: RLNLFFVCSGRGLSNSVQGIKKE*ECSKKT
Trigger: GGTCTTCTTGCTGCACTCTCACTCCTTCTTGATGCC...CTGGACAGAGTTCGAGAGTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATAGCATTACTGTCCCTTaGGGCTGGACTGCTAAAGGT +
Preference number: 2 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDSITVP*GWTAKG
Trigger: ACCTTTAGCAGTCCAGCCTCAAGGGACAGTAATGCT...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTCTGAAGCAGGAAACTaGTTGAACCCGGGAAGCAGA +
Preference number: 2 (lower is better)
Translates to: QALAVTASDDVRLKTHGISEAGN*LNPGSR
Trigger: TCTGCTTCCCGGGTTCAAGCAGTTTCCTGCTTCAGA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGTGACTCTTGGAGGGTaGCAGGAAATATTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLVTLGG*QEIFWR
Trigger: CCTCCAGAATATTTCCTGTCACCCTCCAAGAGTCAC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR TCA 90 bp AGACTCAATCTTTTCTTTGTCTGCAGTGGTAGAGGACTCTCGAACTCTGTCCAGAGGCTGTACAACCTCTaGGCTGTTCTCTTTCAGTGC +
Preference number: 2 (lower is better)
Translates to: RLNLFFVCSGRGLSNSVQRLYNL*AVLFQC
Trigger: GCACTGAAAGAGAACAGCTCAGAGGTTGTACAGCCT...CTGGACAGAGTTCGAGAGTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGTGACTCTTGGAGGGTaGCAGGAAATATTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSVTLGG*QEIFWR
Trigger: CCTCCAGAATATTTCCTGTCACCCTCCAAGAGTCAC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATTGTGACATGAGTCTCTaGATAGCAGCCAAACATAGC +
Preference number: 2 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDCDMSL*IAAKHS
Trigger: GCTATGTTTGGCTGCTATTCAGAGACTCATGTCACA...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp ACTGTAAATCCTGCTGTTCTGTCGACTGTGTTGGTGAAGAACCTTCTTCAGTGGACAGAATCTGTGTATTaGTTCCACCGCAACAGCTCG +
Preference number: 2 (lower is better)
Translates to: TVNPAVLSTVLVKNLLQWTESVY*FHRNSS
Trigger: CGAGCTGTTGCGGTGGAATCAATACACAGATTCTGT...CCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGCTGCTGTGTTCACATaGCCTTACTGGTCAGATGTT +
Preference number: 2 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIAAVFT*PYWSDV
Trigger: AACATCTGACCAGTAAGGTCATGTGAACACAGCAGC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR TCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATTCTTCAGTGGTGGTTTaGCATTCTGTTTCAAGCTCT +
Preference number: 2 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDSSVVV*HSVSSS
Trigger: AGAGCTTGAAACAGAATGTCAAACCACCACTGAAGA...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGGGCAATGTGTTCCATaGCAGCAATCAATTACTGTA +
Preference number: 2 (lower is better)
Translates to: QALAVTASDDVRLKTHGIGQCVP*QQSITV
Trigger: TACAGTAATTGATTGCTGGCATGGAACACATTGCCC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR GCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTAGGAACATACCTGGCTaGTGGCAATGCTTTCAGAGA +
Preference number: 2 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSRNIPG*WQCFQR
Trigger: TCTCTGAAAGCATTGCCAGCAGCCAGGTATGTTCCT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGTAATCCCAGCTACTTaGAAGTCTGAAGCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLVIPAT*KSEAGN
Trigger: GTTTCCTGCTTCAGACTTCCAAGTAGCTGGGATTAC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTAGGGGAACTTTACCTTaGCAAAAACGCAACAGTGGC +
Preference number: 2 (lower is better)
Translates to: NKHLRALQIASVIQQGHSRGTLP*QKRNSG
Trigger: GCCACTGTTGCGTTTTTGCCAAGGTAAAGTTCCCCT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATACCTTCAGGTATAGTTaGAGGCTCAACTTTGTCCAA +
Preference number: 2 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDTFRYS*RLNFVQ
Trigger: TTGGACAAAGTTGAGCCTCCAACTATACCTGAAGGT...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp GACAAAATGACCTTAATAGTTGAGGCTGCACACAGAATCTGTGTATaGATTCCACCGCAACAGCTCGTAGCCACTGTGGTTTATCTGCAT +
Preference number: 2 (lower is better)
Translates to: DKMTLIVEAAHRICV*IPPQQLVATVVYLH
Trigger: ATGCAGATAAACCACAGTGGCTACGAGCTGTTGCGGTGGAATCAATACACAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATTTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp AGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATTATATTTaGCATTTGCAATGTGCTTTGTTTCCAGCTGTCCATACTGTGGAG +
Preference number: 2 (lower is better)
Translates to: RLPIPPVQIVGSDYI*HLQCALFPAVHTVE
Trigger: CTCCACAGTATGGACAGCTGGAAACAAAGCACATTGCAAATGCAAAATATAATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTGCATGATCATATGGTaGGCTTATCCGCCACATATG +
Preference number: 2 (lower is better)
Translates to: IILPRGPPTCFTLRLAFICMIIW*AYPPHM
Trigger: CATATGTGGCGGATAAGCTCACCATATGATCATGCA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTATGAAGCTAACTGCATaGTCATATGGTGAGCTTATC +
Preference number: 2 (lower is better)
Translates to: QALAVTASDDVRLKTHGIMKLTA*SYGELI
Trigger: GATAAGCTCACCATATGATCATGCAGTTAGCTTCAT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR TCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTACAGACAGACTTCAGTaGAAGCTTGGAGAGCTGTTT +
Preference number: 2 (lower is better)
Translates to: NKHLRALQIASVIQQGHSTDRLQ*KLGELF
Trigger: AAACAGCTCTCCAAGCTTTCACTGAAGTCTGTCTGT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTGTTGTCCAGCAATATaGATAAAACAGGCACTGGCA +
Preference number: 2 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLCCPAI*IKQALA
Trigger: TGCCAGTGCCTGTTTTATTCATATTGCTGGACAACA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR TCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTAGCAATCCCATTTTGTaGGCATCTTGGCTGCTGAAT +
Preference number: 2 (lower is better)
Translates to: NKHLRALQIASVIQQGHSSNPIL*ASWLLN
Trigger: ATTCAGCAGCCAAGATGCTCACAAAATGGGATTGCT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp ACCTTCCAGATAACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCAGCCCTGAACGGAATATaGTTTGTTGGAAAGTGTAGC +
Preference number: 2 (lower is better)
Translates to: TFQITVCQVECCNKVPCAALNGI*FVGKCS
Trigger: GCTACACTTTCCAACAAATCATATTCCGTTCAGGGC...TGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAAGGGGGCCACCCACTTaGTTCACACTAAGACTGGCA +
Preference number: 2 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVRGPPT*FTLRLA
Trigger: TGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR GCA 90 bp AGACTCAATCTTTTCTTTGTCTGCAGTGGTAGAGGACTCTCGAACTCTGTCCAGCTGAAGACACTGGAATaGAGTTCGTATCAAGGATTC +
Preference number: 2 (lower is better)
Translates to: RLNLFFVCSGRGLSNSVQLKTLE*SSYQGF
Trigger: GAATCCTTGATACGAACTGCATTCCAGTGTCTTCAG...CTGGACAGAGTTCGAGAGTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTCGGTACACTACCCTTaGGTTATTCTGTTTCAATGC +
Preference number: 2 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLSVHYP*VILFQC
Trigger: GCATTGAAACAGAATAACCCAAGGGTAGTGTACCGA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTACTGTAGTGACTCTTaGAGGGTGACAGGAAATATT +
Preference number: 2 (lower is better)
Translates to: QALAVTASDDVRLKTHGIYCSDS*RVTGNI
Trigger: AATATTTCCTGTCACCCTCCAAGAGTCACTACAGTA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATTGCTTCGGTATAAGATaGAAGAATAAAAGGGGATGC +
Preference number: 2 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDCFGIR*KNKRGC
Trigger: GCATCCCCTTTTATTCTTCCATCTTATACCGAAGCA...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAGCTGCTGTGTTCACATaGCCTTACTGGTCAGATGTT +
Preference number: 2 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRAAVFT*PYWSDV
Trigger: AACATCTGACCAGTAAGGTCATGTGAACACAGCAGC...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAATGAAGCACTGATATaGACAAAACCTCACAGGCAA +
Preference number: 2 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLNEALI*TKPHRQ
Trigger: TTGCCTGTGAGGTTTTGTTCATATCAGTGCTTCATT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGAGATGGAAAGCAAATaGAATTTGCACAGTTGGGTC +
Preference number: 2 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSEMESK*NLHSWV
Trigger: GACCCAACTGTGCAAATTTCATTTGCTTTCCATCTC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp ACTGTAAATCCTGCTGTTCTGTCGACTGTGTTGGTGAAGAACCTTCTTCAGTGGAACTTTTATTATTCCTaGTTCAGCAGCAACGTGTGC +
Preference number: 2 (lower is better)
Translates to: TVNPAVLSTVLVKNLLQWNFYYS*FSSNVC
Trigger: GCACACGTTGCTGCTGAATCAGGAATAATAAAAGTT...CCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp CAACAGCAAAAAGAGATGGTTCCTTATTATTTCCATAGGCCATATCCATTGCTTTGGTGCTGGAGAAGATaGGGTGCTGGAACCTTGTCT +
Preference number: 2 (lower is better)
Translates to: QQQKEMVPYYFHRPYPLLWCWRR*GAGTLS
Trigger: AGACAAGGTTCCAGCACCTCATCTTCTCCAGCACCA...AAGCAATGGATATGGCCTATGGAAATAATAAGGAACCATCTCTTTTTGCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTTGGACTGCTAAAGGTTaGCCCACTGCCACAACTTGT +
Preference number: 2 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSWTAKG*PTATTC
Trigger: ACAAGTTGTGGCAGTGGGTCAACCTTTAGCAGTCCA...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGATTAAAGCCTTACACTaGTGTTCATTCAGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLIKALH*CSFRSL
Trigger: AAGGCTCCTGAATGAACAGCAGTGTAAGGCTTTAAT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTGGGCAATGTGTTCCATaGCAGCAATCAATTACTGTA +
Preference number: 2 (lower is better)
Translates to: NKHLRALQIASVIQQGHSGQCVP*QQSITV
Trigger: TACAGTAATTGATTGCTGGCATGGAACACATTGCCC...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTACTGTAGTGACTCTTaGAGGGTGACAGGAAATATT +
Preference number: 2 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLYCSDS*RVTGNI
Trigger: AATATTTCCTGTCACCCTCCAAGAGTCACTACAGTA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTTTCCAAATAACGGCATaGTTTAGCAGATCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSFQITA*FSRSSL
Trigger: CAGGGAAGATCTGCTAAACCATGCCGTTATTTGGAA...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATAAGAACCTTCTTCAGTaGTGGTTTGACATTCTGTTT +
Preference number: 2 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDKNLLQ*WFDILF
Trigger: AAACAGAATGTCAAACCACCACTGAAGAAGGTTCTT...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CCA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTAGCAACTGCAGCCTCTaGTTTTGTGAGAGTGGAGGA +
Preference number: 2 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSSNCSL*FCESGG
Trigger: TCCTCCACTCTCACAAAACCAGAGGCTGCAGTTGCT...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp TTTGGTCTGATGTTGACTGTAAATCCTGCTGTTCTGTCGACTGTGTaGGTGAAGAACCTTCTTCAGTGGTGGTTTGACATTCTGTTTCAA +
Preference number: 2 (lower is better)
Translates to: FGLMLTVNPAVLSTV*VKNLLQWWFDILFQ
Trigger: TTGAAACAGAATGTCAAACCACCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGTCAACATCAGACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp TACCTGCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTaGGTAGAAAATCTGTCACAACCAACTGAAGACACTGGAATGCAG +
Preference number: 2 (lower is better)
Translates to: YLQHLQLFAGKYKAL*VENLSQPTEDTGMQ
Trigger: CTGCATTCCAGTGTCTTCAGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp AGCTACCTGCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATaGTTGGTAGAAAATCTGTCACAACCAACTGAAGACACTGGAATG +
Preference number: 2 (lower is better)
Translates to: SYLQHLQLFAGKYKA*LVENLSQPTEDTGM
Trigger: CATTCCAGTGTCTTCAGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGCAGGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp ATTTCCTGGAAGCTTTTCAGAGCAGCCAGAGATACTTCATTGTTTTaGCTGAGTGCTGCTGACTGTATATGGTCAAGAAGAACATCCCAA +
Preference number: 2 (lower is better)
Translates to: ISWKLFRAARDTSLF*LSAADCIWSRRTSQ
Trigger: TTGGGATGTTCTTCTTGACCATATACAGTCAGCAGCACTCAGCAAAAACAATGAAGTATCTCTGGCTGCTCTGAAAAGCTTCCAGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGATGCATGATCATATGGTaGGCTTATCCGCCACATATG +
Preference number: 2 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRCMIIW*AYPPHM
Trigger: CATATGTGGCGGATAAGCTCACCATATGATCATGCA...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTTTTTAACATGTTACTaGATCGGTACACTACCCTTG +
Preference number: 2 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLFLTCY*IGTLPL
Trigger: CAAGGGTAGTGTACCGATTCAGTAACATGTTAAAAA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTACTATGTTTATGTTTTaGACTGTAGGGCATGGTCCT +
Preference number: 2 (lower is better)
Translates to: IILPRGPPTCFTLRLAFITMFMF*TVGHGP
Trigger: AGGACCATGCCCTACAGTTCAAAACATAAACATAGT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR TCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTATAAGGAAACCGCTTTaGAAAGTCAACATGCCTAGA +
Preference number: 2 (lower is better)
Translates to: NKHLRALQIASVIQQGHSIRKPL*KVNMPR
Trigger: TCTAGGCATGTTGACTTTTCAAAGCGGTTTCCTTAT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp ATTTCCTTGTACCAGTACTGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCGCAGCCAAACATAGCTaGGTGATCTTCGGTTCCTTG +
Preference number: 2 (lower is better)
Translates to: ISLYQYWLFYNISVSFIFAAKHS*VIFGSL
Trigger: CAAGGAACCGAAGATCACTCAGCTATGTTTGGCTGC...GAAGATGAACGACACAGAGATATTATAGAACAACCAGTACTGGTACAAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp ACCTTCCAGATAACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCAGAAAGTGCCTCATCATaGACTACTGTATTGGTTGTT +
Preference number: 2 (lower is better)
Translates to: TFQITVCQVECCNKVPCAESASS*TTVLVV
Trigger: AACAACCAATACAGTAGTTCATGATGAGGCACTTTC...TGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTATTAAAGCCTTACACTaGTGTTCATTCAGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: NKHLRALQIASVIQQGHSIKALH*CSFRSL
Trigger: AAGGCTCCTGAATGAACAGCAGTGTAAGGCTTTAAT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTAAAGCAAATGAAATTTaGACAGTTGGGTCTGAAGCC +
Preference number: 2 (lower is better)
Translates to: NKHLRALQIASVIQQGHSKANEI*TVGSEA
Trigger: GGCTTCAGACCCAACTGTGCAAATTTCATTTGCTTT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR GCA 90 bp ACCTTCCAGATAACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCAGATTGCCTTAGAAAGTaGCTCATCATGAACTACTGT +
Preference number: 2 (lower is better)
Translates to: TFQITVCQVECCNKVPCADCLRK*LIMNYC
Trigger: ACAGTAGTTCATGATGAGGCACTTTCTAAGGCAATC...TGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAGTTCTTCTAGTCACTaGAGAACCCAATTCATACTA +
Preference number: 2 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLSSSSH*RTQFIL
Trigger: TAGTATGAATTGGGTTCTCCAGTGACTAGAAGAACT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAAACATACCTGGCTGCTaGCAATGCTTTCAGAGATCA +
Preference number: 2 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRNIPGC*QCFQRS
Trigger: TGATCTCTGAAAGCATTGCCAGCAGCCAGGTATGTT...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTTCAGCTATTTCAAAATaGCAGGGGAACTTTACCTTG +
Preference number: 2 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSSAISK*QGNFTL
Trigger: CAAGGTAAAGTTCCCCTGCCATTTTGAAATAGCTGA...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CCA 90 bp TGCGCCAAGTTAAGTAAAGTCCTCATACACTGGATATTTTTGGAAGTCAGCATTAGGTCTAGCAAACAATaGAATGCCACAGACATGGCG +
Preference number: 2 (lower is better)
Translates to: CAKLSKVLIHWIFLEVSIRSSKQ*NATDMA
Trigger: CGCCATGTCTGTGGCATTCCATTGTTTGCTAGACCT...AATGCTGACTTCCAAAAATATCCAGTGTATGAGGACTTTACTTAACTTGGCGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp AGGAAACTAAATTCTTGGTGTTGTAAAAAGACCTGCGGAAAATCATaGAGGACTGACTCAAGTAATTCGAGGCCAAACGTCCGAGTCATT +
Preference number: 2 (lower is better)
Translates to: RKLNSWCCKKTCGKS*RTDSSNSRPNVRVI
Trigger: AATGACTCGGACGTTTGGCCTCGAATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGGTCTTTTTACAACACCAAGAATTTAGTTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTTTTAAACAGAGTAAGTaGTGTGGGGTGTCAATAATG +
Preference number: 2 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSFKQSK*CGVSIM
Trigger: CATTATTGACACCCCACATCACTTACTCTGTTTAAA...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp CTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTGTCACAACCAACTAATGACCTTAATAGTTaGGGCTGCACACAGAATCTG +
Preference number: 2 (lower is better)
Translates to: LFAGKYKALLVENLSQPTNDLNS*GCTQNL
Trigger: CAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATT...AGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp CAACAGCAAAAAGAGATGGTTCCTTATTATTTCCATAGGCCATATCCATTGCTTACAGCCCCATGGCAATaGGCCAAGTTAAGTAAAGTC +
Preference number: 2 (lower is better)
Translates to: QQQKEMVPYYFHRPYPLLTAPWQ*AKLSKV
Trigger: GACTTTACTTAACTTGGCGCATTGCCATGGGGCTGT...AAGCAATGGATATGGCCTATGGAAATAATAAGGAACCATCTCTTTTTGCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTATTCGAGAGTTTGGATaGTGGCAGACCTCAAGTAGA +
Preference number: 2 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSIREFG*WQTSSR
Trigger: TCTACTTGAGGTCTGCCAGCATCCAAACTCTCGAAT...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTATTCTTAACATTCAGTaGTTGTCTGGTGAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSILNIQ*LSGERQ
Trigger: TTGCCTTTCACCAGACAACCACTGAATGTTAAGAAT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CCA 90 bp AGACTCAATCTTTTCTTTGTCTGCAGTGGTAGAGGACTCTCGAACTCTGTCCAGTCCTTGTACCAGTACTaGTTGTTCTATAATATCTCT +
Preference number: 2 (lower is better)
Translates to: RLNLFFVCSGRGLSNSVQSLYQY*LFYNIS
Trigger: AGAGATATTATAGAACAACCAGTACTGGTACAAGGA...CTGGACAGAGTTCGAGAGTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp AGCACAAGGTTTGAGGGTACTGACAGATCTTCTGTTACTATTTCCTaGTACCAGTACTGGTTGTTCTATAATATCTCTGTGTCGTTCATC +
Preference number: 2 (lower is better)
Translates to: STRFEGTDRSSVTIS*YQYWLFYNISVSFI
Trigger: GATGAACGACACAGAGATATTATAGAACAACCAGTACTGGTACAAGGAAATAGTAACAGAAGATCTGTCAGTACCCTCAAACCTTGTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAAGCTACTTGGAAGTCTaGAGCAGGAAACTGCTTGAA +
Preference number: 2 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVSYLEV*SRKLLE
Trigger: TTCAAGCAGTTTCCTGCTTCAGACTTCCAAGTAGCT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAAAATACTATGTGGCATaGACTCCCATTCTTCTCATG +
Preference number: 2 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRKYYVA*TPILLM
Trigger: CATGAGAAGAATGGGAGTTCATGCCACATAGTATTT...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAGAGATAGTCTGGCATTaGTATGGACAGGCAGTTTCA +
Preference number: 2 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVEIVWH*YGQAVS
Trigger: TGAAACTGCCTGTCCATATCAATGCCAGACTATCTC...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCCTTCAATCATACTTGTaGTTCCACGAACAAGGTCTA +
Preference number: 2 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCLQSYL*FHEQGL
Trigger: TAGACCTTGTTCGTGGAATCACAAGTATGATTGAAG...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTCACTGCACTTCTAAATaGTTGACTATCTCCAAAAAT +
Preference number: 2 (lower is better)
Translates to: NKHLRALQIASVIQQGHSHCTSK*LTISKN
Trigger: ATTTTTGGAGATAGTCAAGCATTTAGAAGTGCAGTG...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR GCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTTTCTTGAATGATGTGTaGCAAATGTGTTTTACTTCC +
Preference number: 2 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSFLNDV*QMCFTS
Trigger: GGAAGTAAAACACATTTGGCACACATCATTCAAGAA...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR GCA 90 bp TATGACTCCCAACTTTTGCAAGTCATCCATATTGAAACCAGTTTTTATGTGTTGAACTCCTTTCTCTTCTaGCTGCTTTTGCTGTGCTGC +
Preference number: 2 (lower is better)
Translates to: YDSQLLQVIHIETSFYVLNSFLF*LLLLCC
Trigger: GCAGCACAGCAAAAGCAGGCAGAAGAGAAAGGAGTT...CAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CCA 90 bp TTGGAAGAGGGCATTTACCACTTAATCTTTCATCCTCTATATAGCGATGTAGTATTGTTAGAACTGTACTaGGTCCTTCTACAGCTCTCC +
Preference number: 2 (lower is better)
Translates to: LEEGIYHLIFHPLYSDVVLLELY*VLLQLS
Trigger: GGAGAGCTGTAGAAGGACCCAGTACAGTTCTAACAA...TACTACATCGCTATATAGAGGATGAAAGATTAAGTGGTAAATGCCCTCTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CCA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCATCTGTAAAATTTCCTaGAAGCTTTTCAGAGCAGCC +
Preference number: 2 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCICKIS*KLFRAA
Trigger: GGCTGCTCTGAAAAGCTTCCAGGAAATTTTACAGAT...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp CCAGAAAAAGACTTTATTAATCATACAATTGGTGGCATATGTCTGTaGTCCAGCAATATGAATAAAACAGGCACTGGCAGTGACAGCAAG +
Preference number: 2 (lower is better)
Translates to: PEKDFINHTIGGICL*SSNMNKTGTGSDSK
Trigger: CTTGCTGTCACTGCCAGTGCCTGTTTTATTCATATTGCTGGACAACAGACATATGCCACCAATTGTATGATTAATAAAGTCTTTTTCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CAA 90 bp TATTATTTTATATATGCGGTTTCCTTGACTAGCTGTAATAAGCACTaGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGT +
Preference number: 2 (lower is better)
Translates to: YYFIYAVSLTSCNKH*RALQIASVIQQGHS
Trigger: ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATTACAGCTAGTCAAGGAAACCGCATATATAAAATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGATTTTTAACATGTTACTaGATCGGTACACTACCCTTG +
Preference number: 2 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRFLTCY*IGTLPL
Trigger: CAAGGGTAGTGTACCGATTCAGTAACATGTTAAAAA...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAACTTGGTTGCCCATCTaGATTATTCTGTATTTGGGG +
Preference number: 2 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVTWLPI*IILYLG
Trigger: CCCCAAATACAGAATAATTCAGATGGGCAACCAAGT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR TCA 90 bp CAACAGCAAAAAGAGATGGTTCCTTATTATTTCCATAGGCCATATCCATTGCTTCCTGCGGAAAATCATTaGGGACTGACTCAAGTAATT +
Preference number: 2 (lower is better)
Translates to: QQQKEMVPYYFHRPYPLLPAENH*GLTQVI
Trigger: AATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGG...AAGCAATGGATATGGCCTATGGAAATAATAAGGAACCATCTCTTTTTGCTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp TATGACTCCCAACTTTTGCAAGTCATCCATATTGAAACCAGTTTTTATGTGTTGTTTGCTGAGTGCTGCTaGCTGTATATGGTCAAGAAG +
Preference number: 2 (lower is better)
Translates to: YDSQLLQVIHIETSFYVLFAECC*LYMVKK
Trigger: CTTCTTGACCATATACAGTCAGCAGCACTCAGCAAA...CAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp CATAGGACTGACAAAATGACCTTAATAGTTGAGGCTGCACACAGAATCTGTGTACTGCCAAGAATTATCTaGAGTAAGAAATGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: HRTDKMTLIVEAAHRICVLPRII*SKKCPS
Trigger: AGAAGGACATTTCTTACTGCAGATAATTCTTGGCAG...TACACAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATTTTGTCAGTCCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGAGGCCAACAACAGCTaGCAAGAATTATCTGCAGTA +
Preference number: 2 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLEANNS*QELSAV
Trigger: TACTGCAGATAATTCTTGGCAGCTGTTGTTGGCCTC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
3UTR-3UTR GCA 90 bp CATAGGACTGACAAAATGACCTTAATAGTTGAGGCTGCACACAGAATCTGTGTATGTTGTAAAAAGACCTaGGGAAAATCATTGAGGACT +
Preference number: 2 (lower is better)
Translates to: HRTDKMTLIVEAAHRICVCCKKT*GKSLRT
Trigger: AGTCCTCAATGATTTTCCGCAGGTCTTTTTACAACA...TACACAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATTTTGTCAGTCCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp ATATTTGGAGAAAAGAGCTTTATCACAAGAGGACATACCCTTTCTTaGAGGAGGAAACTAAATTCTTGGTGTTGTAAAAAGACCTGCGGA +
Preference number: 2 (lower is better)
Translates to: IFGEKSFITRGHTLS*RRKLNSWCCKKTCG
Trigger: TCCGCAGGTCTTTTTACAACACCAAGAATTTAGTTTCCTCCTCAAAGAAAGGGTATGTCCTCTTGTGATAAAGCTCTTTTCTCCAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR TCA 90 bp TTGGAAGAGGGCATTTACCACTTAATCTTTCATCCTCTATATAGCGATGTAGTAGTAAATGAAGATGACTaGGAATGTATTGAGCCCTTG +
Preference number: 2 (lower is better)
Translates to: LEEGIYHLIFHPLYSDVVVNEDD*ECIEPL
Trigger: CAAGGGCTCAATACATTCTCAGTCATCTTCATTTAC...TACTACATCGCTATATAGAGGATGAAAGATTAAGTGGTAAATGCCCTCTTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAAATCTGAAATCATCTTaGCTGGGTCATAATTCAAAG +
Preference number: 2 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRNLKSS*LGHNSK
Trigger: CTTTGAATTATGACCCAGGCAAGATGATTTCAGATT...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAGCAAAAACGCAACAGTaGCCAAAGTGCAAAGTATTT +
Preference number: 2 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVAKTQQ*PKCKVF
Trigger: AAATACTTTGCACTTTGGCCACTGTTGCGTTTTTGC...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR CAA 90 bp TCGTTCATCTTCAGCAACCATCCTCTCAAAAACAACAGTAACAACTaGTCGCACTGTAGCAGCAGCTGTATTATTTGTAATATTATCTTT +
Preference number: 2 (lower is better)
Translates to: SFIFSNHPLKNNSNN*SHCSSSCIICNIIF
Trigger: AAAGATAATATTACAAATAATACAGCTGCTGCTACAGTGCGACAAGTTGTTACTGTTGTTTTTGAGAGGATGGTTGCTGAAGATGAACGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAAATGCCAAACCTAAGTaGAAATCTAAGGAACATACC +
Preference number: 2 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVNAKPK*KSKEHT
Trigger: GGTATGTTCCTTAGATTTCCACTTAGGTTTGGCATT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CCA 90 bp TATGACTCCCAACTTTTGCAAGTCATCCATATTGAAACCAGTTTTTATGTGTTGGCAGATAGGAAAATATaGTTTTTCAACTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: YDSQLLQVIHIETSFYVLADRKI*FFNWCW
Trigger: CCAGCACCAGTTGAAAAACCATATTTTCCTATCTGC...CAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 90 bp AGAACCTATATTTCAAAGCTCCAAAATCAGCAAATCATAAACTATTaGCTGCTGTGTTCACATGACCTTACTGGTCAGATGTTTAATGGT +
Preference number: 2 (lower is better)
Translates to: RTYISKLQNQQIINY*LLCSHDLTGQMFNG
Trigger: ACCATTAAACATCTGACCAGTAAGGTCATGTGAACACAGCAGCAAATAGTTTATGATTTGCTGATTTTGGAGCTTTGAAATATAGGTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCTGCCAAGAATTATCTaGAGTAAGAAATGTCCTTCT +
Preference number: 2 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLLPRII*SKKCPS
Trigger: AGAAGGACATTTCTTACTGCAGATAATTCTTGGCAG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
3UTR-3UTR GCA 90 bp TTGGAAGAGGGCATTTACCACTTAATCTTTCATCCTCTATATAGCGATGTAGTACTGGAAAAGCATATATaGATCTTTAGCACAAGGTTT +
Preference number: 2 (lower is better)
Translates to: LEEGIYHLIFHPLYSDVVLEKHI*IFSTRF
Trigger: AAACCTTGTGCTAAAGATGCATATATGCTTTTCCAG...TACTACATCGCTATATAGAGGATGAAAGATTAAGTGGTAAATGCCCTCTTCCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 72 bp AGCACTAATGGCCATCCAGGCCCAAGACTGTCTCCCTaGCTCTGCAGAATCTGCAACACGCATTCTAACTGC +
Preference number: 3 (lower is better)
Translates to: STNGHPGPRLSP*LCRICNTHSNC
Trigger: GCAGTTAGAATGCGTGTTGCAGATTCTGCAGAGTCAGGGAGACAGTCTTGGGCCTGGATGGCCATTAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR GCA 72 bp TCCATGCGCACCAATTGTAGAAAACAGAGTTTGCCCTaGACTCTTCCTGACAGCAGGACGGGGATCCACACA +
Preference number: 3 (lower is better)
Translates to: SMRTNCRKQSLP*TLPDSRTGIHT
Trigger: TGTGTGGATCCCCGTCCTGCTGTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTACAATTGGTGCGCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTAAGGGGGCCACCCACTaGCTTCACACTAAGACTGGC +
Preference number: 3 (lower is better)
Translates to: QALAVTASDDVRLKTHGIKGATH*LHTKTG
Trigger: GCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGAAGCAGGAAACTGCTaGAACCCGGGAAGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: QALAVTASDDVRLKTHGIEAGNC*NPGSRG
Trigger: ACCTCTGCTTCCCGGGTTCAAGCAGTTTCCTGCTTC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR GCA 72 bp AAAGTTCCATGCGCACCAATTGTAGAAAACAGAGTTTaGCCTGCACTCTTCCTGACAGCAGGACGGGGATCC +
Preference number: 3 (lower is better)
Translates to: KVPCAPIVENRV*PALFLTAGRGS
Trigger: GGATCCCCGTCCTGCTGTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTACAATTGGTGCGCATGGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 72 bp CACAAGATGCTGAAGAGTTGCCAAGACAAGTTGCCATaGTGTTCCAAGAACAGCCCCATGGCAATGCGCCAA +
Preference number: 3 (lower is better)
Translates to: HKMLKSCQDKLP*CSKNSPMAMRQ
Trigger: TTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGCAACTTGTCTTGGCAACTCTTCAGCATCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 72 bp GTGGCACAGTTAGGGACTCCTGTAAGTGTTCTGCCTTaGCTAGACAGACTTCACCTACAGCAGTCTCTTGAA +
Preference number: 3 (lower is better)
Translates to: VAQLGTPVSVLP*LDRLHLQQSLE
Trigger: TTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACTTACAGGAGTCCCTAACTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CAA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCTCTTTAGCACAAGGTTaGAGGGTACTGACAGATCTT +
Preference number: 3 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPSLAQG*RVLTDL
Trigger: AAGATCTGTCAGTACCCTCAAACCTTGTGCTAAAGA...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR GCA 72 bp GGCCACATACTGTCAAATTTTCCAGAAGAAGCATGCTaGCGGGCAACAGGTAGCCCAATAGAAAGAACTCTG +
Preference number: 3 (lower is better)
Translates to: GHILSNFPEEAC*RATGSPIERTL
Trigger: CAGAGTTCTTTCTATTGGGCTACCTGTTGCCCGGCAGCATGCTTCTTCTGGAAAATTTGACAGTATGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCAGGGGAACTTTACCTaGGCAAAAACGCAACAGTGG +
Preference number: 3 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSQGNFT*AKTQQW
Trigger: CCACTGTTGCGTTTTTGCCAAGGTAAAGTTCCCCTG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR GCA 72 bp TCTGGCCACATACTGTCAAATTTTCCAGAAGAAGCATaGTGCCGGGCAACAGGTAGCCCAATAGAAAGAACT +
Preference number: 3 (lower is better)
Translates to: SGHILSNFPEEA*CRATGSPIERT
Trigger: AGTTCTTTCTATTGGGCTACCTGTTGCCCGGCAGCATGCTTCTTCTGGAAAATTTGACAGTATGTGGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAAAGGGGGCCACCCACTaGCTTCACACTAAGACTGGC +
Preference number: 3 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVKGATH*LHTKTG
Trigger: GCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTACCTACAGCAGTCTCTaGAAAACTTGGTTGCCCATC +
Preference number: 3 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSTYSSL*KTWLPI
Trigger: GATGGGCAACCAAGTTTTCAAGAGACTGCTGTAGGT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CAA 90 bp CCTGAGTTAGCTGGTGCTGAGACTGAGCCACCTAAATTATTGTTTCCAGCTTGGACCTGCGGAAAATCATaGAGGACTGACTCAAGTAAT +
Preference number: 3 (lower is better)
Translates to: PELAGAETEPPKLLFPAWTCGKS*RTDSSN
Trigger: ATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGGT...CCAAGCTGGAAACAATAATTTAGGTGGCTCAGTCTCAGCACCAGCTAACTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 72 bp GACTGTGTTGGTGAAGAACCTTCTTCAGTGGTGGTTTaGCATTCTGTTTCAAGCTCTCCTAGCTCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: DCVGEEPSSVVV*HSVSSSPSSPS
Trigger: TGAAGGAGAGCTAGGAGAGCTTGAAACAGAATGTCAAACCACCACTGAAGAAGGTTCTTCACCAACACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR GCA 72 bp AGTTGCCATGATGTTCCAAGAACAGCCCCATGGCAATaGGCCAAGTTAAGTAAAGTCCTCATACACTGGATA +
Preference number: 3 (lower is better)
Translates to: SCHDVPRTAPWQ*AKLSKVLIHWI
Trigger: TATCCAGTGTATGAGGACTTTACTTAACTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 72 bp AAGACAAGTTGCCATGATGTTCCAAGAACAGCCCCATaGCAATGCGCCAAGTTAAGTAAAGTCCTCATACAC +
Preference number: 3 (lower is better)
Translates to: KTSCHDVPRTAP*QCAKLSKVLIH
Trigger: GTGTATGAGGACTTTACTTAACTTGGCGCATTGCCATGGGGCTGTTCTTGGAACATCATGGCAACTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGATTCAGGAGCCTTTGTaGATGTGCAAGCCTGTAATA +
Preference number: 3 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLIQEPL*MCKPVI
Trigger: TATTACAGGCTTGCACATCAACAAAGGCTCCTGAAT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR TCA 72 bp TTGACCCACTGCCACAACTTGTTGGTGAGATTCACTTaGTGGACTTATCATCATAACACTTTGGCCCTGAAC +
Preference number: 3 (lower is better)
Translates to: LTHCHNLLVRFT*WTYHHNTLALN
Trigger: GTTCAGGGCCAAAGTGTTATGATGATAAGTCCATCAAGTGAATCTCACCAACAAGTTGTGGCAGTGGGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 72 bp AATGGAATCTGTTCTTACAAATGGCCTGCTCATGCCTaGTATGGGCCCTATAAGAACAGGCACAGGTACATT +
Preference number: 3 (lower is better)
Translates to: NGICSYKWPAHA*YGPYKNRHRYI
Trigger: AATGTACCTGTGCCTGTTCTTATAGGGCCCATATCAGGCATGAGCAGGCCATTTGTAAGAACAGATTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR GCA 72 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATaGGCACCAATTGTAGAAAACAGAGTTTGCCCTGCA +
Preference number: 3 (lower is better)
Translates to: TVCQVECCNKVP*APIVENRVCPA
Trigger: TGCAGGGCAAACTCTGTTTTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 72 bp TGGCAGGGGAACTTTACCTTGGCAAAAACGCAACAGTaGCCAAAGTGCAAAGTATTTCTACTTTCCACTTTG +
Preference number: 3 (lower is better)
Translates to: WQGNFTLAKTQQ*PKCKVFLLSTL
Trigger: CAAAGTGGAAAGTAGAAATACTTTGCACTTTGGCCACTGTTGCGTTTTTGCCAAGGTAAAGTTCCCCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CCA 72 bp AGACATAACCACAAGCAATCAAATGGCGGTGCAGGGTaGAATGGCCGATTTAAAACAACTCCTTTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: RHNHKQSNGGAG*NGRFKTTPFSS
Trigger: AGAAGAGAAAGGAGTTGTTTTAAATCGGCCATTCCACCCTGCACCGCCATTTGATTGCTTGTGGTTATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTATTCAGGAGCCTTTGTaGATGTGCAAGCCTGTAATA +
Preference number: 3 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIIQEPL*MCKPVI
Trigger: TATTACAGGCTTGCACATCAACAAAGGCTCCTGAAT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCAAATCATAAACTATTaGCTGCTGTGTTCACATGAC +
Preference number: 3 (lower is better)
Translates to: QALAVTASDDVRLKTHGIQIINY*LLCSHD
Trigger: GTCATGTGAACACAGCAGCAAATAGTTTATGATTTG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTATCGGTACACTACCCTaGGGTTATTCTGTTTCAATG +
Preference number: 3 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIIGTLP*GYSVSM
Trigger: CATTGAAACAGAATAACCCAAGGGTAGTGTACCGAT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCACTATGTTTATGTTTaGAACTGTAGGGCATGGTCC +
Preference number: 3 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSHYVYV*NCRAWS
Trigger: GGACCATGCCCTACAGTTCAAAACATAAACATAGTG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CAA 90 bp CTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTGTCACAACCAACTGTTCTGTCGACTGTGTaGGTGAAGAACCTTCTTCAG +
Preference number: 3 (lower is better)
Translates to: LFAGKYKALLVENLSQPTVLSTV*VKNLLQ
Trigger: CTGAAGAAGGTTCTTCACCAACACAGTCGACAGAAC...AGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp CTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTGTCACAACCAACTCATAGGCCATATCCATaGCTTCTAGAGACAAGGAGC +
Preference number: 3 (lower is better)
Translates to: LFAGKYKALLVENLSQPTHRPYP*LLETRS
Trigger: GCTCCTTGTCTCTAGAAGCAATGGATATGGCCTATG...AGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATAAATATCTTCTAGTGTaGAAGATCCTTGCTACTCCA +
Preference number: 3 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDKYLLV*KILATP
Trigger: TGGAGTAGCAAGGATCTTCAACACTAGAAGATATTT...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 72 bp ATACAATTGGTGGCATATGTCTGTTGTCCAGCAATATaGATAAAACAGGCACTGGCAGTGACAGCAAGTGAC +
Preference number: 3 (lower is better)
Translates to: IQLVAYVCCPAI*IKQALAVTASD
Trigger: GTCACTTGCTGTCACTGCCAGTGCCTGTTTTATTCATATTGCTGGACAACAGACATATGCCACCAATTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR TCA 72 bp GCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTaGAAACTTGGTTGCCCATCTGAATTATTCTGTATT +
Preference number: 3 (lower is better)
Translates to: ALARQTSPTAVS*KLGCPSELFCI
Trigger: AATACAGAATAATTCAGATGGGCAACCAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR GCA 72 bp CAATTCATACTAACAAGACAAGGGCAATGTGTTCCATaGCAGCAATCAATTACTGTAGTGACTCTTGGAGGG +
Preference number: 3 (lower is better)
Translates to: QFILTRQGQCVP*QQSITVVTLGG
Trigger: CCCTCCAAGAGTCACTACAGTAATTGATTGCTGGCATGGAACACATTGCCCTTGTCTTGTTAGTATGAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR GCA 72 bp TCCTTATCCATTTGGTCTGATGTTGACTGTAAATCCTaGTGTTCTGTCGACTGTGTTGGTGAAGAACCTTCT +
Preference number: 3 (lower is better)
Translates to: SLSIWSDVDCKS*CSVDCVGEEPS
Trigger: AGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGTCAACATCAGACCAAATGGATAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR GCA 72 bp TGGAGGCCAAAGCTACCTGCAACATCTACAACTATTTaGAGGCAAGTACAAGGCATTGTTGGTAGAAAATCT +
Preference number: 3 (lower is better)
Translates to: WRPKLPATSTTI*RQVQGIVGRKS
Trigger: AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGCAGGTAGCTTTGGCCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 72 bp TGTTCCATGCCAGCAATCAATTACTGTAGTGACTCTTaGAGGGTGACAGGAAATATTCTGGAGGAAAATCCT +
Preference number: 3 (lower is better)
Translates to: CSMPAINYCSDS*RVTGNILEENP
Trigger: AGGATTTTCCTCCAGAATATTTCCTGTCACCCTCCAAGAGTCACTACAGTAATTGATTGCTGGCATGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CCA 72 bp GCTAATTCATCCTTAACTGTTTCTCAACTGATCCTTTaGCCCAATGGTTACCTGGGACTAGTGGTACCAAAT +
Preference number: 3 (lower is better)
Translates to: ANSSLTVSQLIL*PNGYLGLVVPN
Trigger: ATTTGGTACCACTAGTCCCAGGTAACCATTGGGCCAAAGGATCAGTTGAGAAACAGTTAAGGATGAATTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTTGCCTTTTGTTTGTTTaGGAACCTAAAAGGCTCCTA +
Preference number: 3 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSCLLFV*EPKRLL
Trigger: TAGGAGCCTTTTAGGTTCCAAAACAAACAAAAGGCA...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CAA 90 bp TGCGCCAAGTTAAGTAAAGTCCTCATACACTGGATATTTTTGGAAGTCAGCATTAACAACAGTAACAACTaGTCGCACTGTAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: CAKLSKVLIHWIFLEVSINNSNN*SHCSSS
Trigger: GCTGCTGCTACAGTGCGACAAGTTGTTACTGTTGTT...AATGCTGACTTCCAAAAATATCCAGTGTATGAGGACTTTACTTAACTTGGCGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp ACCTTCCAGATAACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCAATTATTGTTTCCAGCTaGGTTGCTTGTTGCAGGATT +
Preference number: 3 (lower is better)
Translates to: TFQITVCQVECCNKVPCAIIVSS*VACCRI
Trigger: AATCCTGCAACAAGCAACCAAGCTGGAAACAATAAT...TGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp ACCTTCCAGATAACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCATATCAAGGATTCTCCTaGATCATTTCTGATTGCTCC +
Preference number: 3 (lower is better)
Translates to: TFQITVCQVECCNKVPCAYQGFS*IISDCS
Trigger: GGAGCAATCAGAAATGATCAAGGAGAATCCTTGATA...TGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 72 bp TTTCAAGCTCTCCTAGCTCTCCTTCAATCATACTTGTaGTTCCACGAACAAGGTCTAGCAAACAATGGAATG +
Preference number: 3 (lower is better)
Translates to: FQALLALLQSYL*FHEQGLANNGM
Trigger: CATTCCATTGTTTGCTAGACCTTGTTCGTGGAATCACAAGTATGATTGAAGGAGAGCTAGGAGAGCTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 72 bp CAAGGCATTGTTGGTAGAAAATCTGTCACAACCAACTaGAGACACTGGAATGCAGTTCGTATCAAGGATTCT +
Preference number: 3 (lower is better)
Translates to: QGIVGRKSVTTN*RHWNAVRIKDS
Trigger: AGAATCCTTGATACGAACTGCATTCCAGTGTCTTCAGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCAAATCATAAACTATTaGCTGCTGTGTTCACATGAC +
Preference number: 3 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSQIINY*LLCSHD
Trigger: GTCATGTGAACACAGCAGCAAATAGTTTATGATTTG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CAA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTGGCTTTAGCACTGCCTaGAACTGTGATTGTCAGAAT +
Preference number: 3 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSGFSTA*NCDCQN
Trigger: ATTCTGACAATCACAGTTCAAGGCAGTGCTAAAGCC...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAAAACATCTACAACTATTaGCAGGCAAGTACAAGGCAT +
Preference number: 3 (lower is better)
Translates to: TVCQVECCNKVPCAPIVENIYNY*QASTRH
Trigger: ATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTT...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTATTCATTCAGGAGCCTTaGTTGATGTGCAAGCCTGTA +
Preference number: 3 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVFIQEP*LMCKPV
Trigger: TACAGGCTTGCACATCAACAAAGGCTCCTGAATGAA...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CAA 90 bp TGCGCCAAGTTAAGTAAAGTCCTCATACACTGGATATTTTTGGAAGTCAGCATTCCATTTGGTCTGATGTaGACTGTAAATCCTGCTGTT +
Preference number: 3 (lower is better)
Translates to: CAKLSKVLIHWIFLEVSIPFGLM*TVNPAV
Trigger: AACAGCAGGATTTACAGTCAACATCAGACCAAATGG...AATGCTGACTTCCAAAAATATCCAGTGTATGAGGACTTTACTTAACTTGGCGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR GCA 72 bp GATGCATCTGAACTTATTGGGACTGAAATAGCACTGTaGAATATGACTCCCAACTTTTGCAAGTCATCCATA +
Preference number: 3 (lower is better)
Translates to: DASELIGTEIAL*NMTPNFCKSSI
Trigger: TATGGATGACTTGCAAAAGTTGGGAGTCATATTGCACAGTGCTATTTCAGTCCCAATAAGTTCAGATGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 72 bp AACCTAAGTGGAAATCTAAGGAACATACCTGGCTGCTaGCAATGCTTTCAGAGATCATTTTTGTCTACATCT +
Preference number: 3 (lower is better)
Translates to: NLSGNLRNIPGC*QCFQRSFLSTS
Trigger: AGATGTAGACAAAAATGATCTCTGAAAGCATTGCCAGCAGCCAGGTATGTTCCTTAGATTTCCACTTAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTTCATTCAGGAGCCTTaGTTGATGTGCAAGCCTGTA +
Preference number: 3 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLFIQEP*LMCKPV
Trigger: TACAGGCTTGCACATCAACAAAGGCTCCTGAATGAA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
3UTR TCA 72 bp TTTATAGCAATCCCATTTTGTGAGCATCTTGGCTGCTaGATCCCGTGTATTCATAAAGACAGTAGGAGTTAT +
Preference number: 3 (lower is better)
Translates to: FIAIPFCEHLGC*IPCIHKDSRSY
Trigger: ATAACTCCTACTGTCTTTATGAATACACGGGATTCAGCAGCCAAGATGCTCACAAAATGGGATTGCTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR TCA 72 bp TTATTTTCTTTGAGAGGTAGAGAGATAGTCTGGCATTaGTATGGACAGGCAGTTTCAAAACAGCTTCACCAA +
Preference number: 3 (lower is better)
Translates to: LFSLRGREIVWH*YGQAVSKQLHQ
Trigger: TTGGTGAAGCTGTTTTGAAACTGCCTGTCCATATCAATGCCAGACTATCTCTCTACCTCTCAAAGAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR CCA 72 bp ACTTCATTGTTTTTGCTGAGTGCTGCTGACTGTATATaGTCAAGAAGAACATCCCAAGCTCTTGAAAAATCT +
Preference number: 3 (lower is better)
Translates to: TSLFLLSAADCI*SRRTSQALEKS
Trigger: AGATTTTTCAAGAGCTTGGGATGTTCTTCTTGACCATATACAGTCAGCAGCACTCAGCAAAAACAATGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAGGTGGCATATGTCTGTaGTCCAGCAATATGAATAAA +
Preference number: 3 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVGGICL*SSNMNK
Trigger: TTTATTCATATTGCTGGACAACAGACATATGCCACC...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CAA 90 bp TGCGCCAAGTTAAGTAAAGTCCTCATACACTGGATATTTTTGGAAGTCAGCATTTTGTACCAGTACTGGTaGTTCTATAATATCTCTGTG +
Preference number: 3 (lower is better)
Translates to: CAKLSKVLIHWIFLEVSILYQYW*FYNISV
Trigger: CACAGAGATATTATAGAACAACCAGTACTGGTACAA...AATGCTGACTTCCAAAAATATCCAGTGTATGAGGACTTTACTTAACTTGGCGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp CAACAGCAAAAAGAGATGGTTCCTTATTATTTCCATAGGCCATATCCATTGCTTTCTGTTACTATTTCCTaGTACCAGTACTGGTTGTTC +
Preference number: 3 (lower is better)
Translates to: QQQKEMVPYYFHRPYPLLSVTIS*YQYWLF
Trigger: GAACAACCAGTACTGGTACAAGGAAATAGTAACAGA...AAGCAATGGATATGGCCTATGGAAATAATAAGGAACCATCTCTTTTTGCTGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp TATGACTCCCAACTTTTGCAAGTCATCCATATTGAAACCAGTTTTTATGTGTTGACGGAATATGATTTGTaGGAAAGTGTAGCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: YDSQLLQVIHIETSFYVLTEYDL*ESVAAV
Trigger: CACTGCAGCTACACTTTCCAACAAATCATATTCCGT...CAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR TCA 72 bp AACACGCATTCTAACTGCTTGAGTCGAATATCTGGATaGTTAATATTGGACATCTCCTTTAACGGGTTCAAT +
Preference number: 3 (lower is better)
Translates to: NTHSNCLSRISG*LILDISFNGFN
Trigger: ATTGAACCCGTTAAAGGAGATGTCCAATATTAATCATCCAGATATTCGACTCAAGCAGTTAGAATGCGTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAGTATATCAGTTCCCTTaGTTAACAAAGGCTGGTTAT +
Preference number: 3 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVVYQFP*LTKAGY
Trigger: ATAACCAGCCTTTGTTAACAAAGGGAACTGATATAC...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR-3UTR CAA 90 bp ATAAAAGATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTGGACATACCCTTTCTTaGAGGAGGAAACTAAATTCT +
Preference number: 3 (lower is better)
Translates to: IKDPSAFTISRKTLVECCGHTLS*RRKLNS
Trigger: AGAATTTAGTTTCCTCCTCAAAGAAAGGGTATGTCC...ACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CCA 72 bp AAATTCTACAAATGCCAACAACTGGTCAAATATAGCTaGATACATTATCTGCATGTTTTCTGGTCCTACACA +
Preference number: 3 (lower is better)
Translates to: KFYKCQQLVKYS*IHYLHVFWSYT
Trigger: TGTGTAGGACCAGAAAACATGCAGATAATGTATCCAGCTATATTTGACCAGTTGTTGGCATTTGTAGAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCCACCAGGTCCCCATATCCTAGGGGTTTCCTTGCTCTGAGCAGTTTCACTGCACAGCAGCCCGCTTCTTaGGCCCTGGGCTGCGAACCC +
Preference number: 4 (lower is better)
Translates to: STRSPYPRGFLALSSFTAQQPAS*ALGCEP
Trigger: GGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTG...TGCAGTGAAACTGCTCAGAGCAAGGAAACCCCTAGGATATGGGGACCTGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR CCA 90 bp GAGCTGTTCTCTTTCAGTGCTGAAAAAGGTCCACCAGGTCCCCATATCCTAGGGCCGCTTCTTGGGCCCTaGGCTGCGAACCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ELFSFSAEKGPPGPHILGPLLGP*AANPEP
Trigger: AGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGG...CCCTAGGATATGGGGACCTGGTGGACCTTTTTCAGCACTGAAAGAGAACAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR TCA 90 bp TCCACCAGGTCCCCATATCCTAGGGGTTTCCTTGCTCTGAGCAGTTTCACTGCATGCTGGTGCCGGACATaGTCCTCCAAGGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: STRSPYPRGFLALSSFTACWCRT*SSKVPA
Trigger: GGCTGGGACCTTGGAGGATCATGTCCGGCACCAGCA...TGCAGTGAAACTGCTCAGAGCAAGGAAACCCCTAGGATATGGGGACCTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR CCA 90 bp TCCACCAGGTCCCCATATCCTAGGGGTTTCCTTGCTCTGAGCAGTTTCACTGCACCCTCCCGGTGTCTCTaGTCCTTCAGCAGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: STRSPYPRGFLALSSFTAPSRCL*SFSSPL
Trigger: AAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGGG...TGCAGTGAAACTGCTCAGAGCAAGGAAACCCCTAGGATATGGGGACCTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR CCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATCAGCAGCCCGCTTCTTaGGCCCTGGGCTGCGAACCC +
Preference number: 4 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDQQPAS*ALGCEP
Trigger: GGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTG...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCCGCTTCTTGGGCCCTaGGCTGCGAACCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLPLLGP*AANPEP
Trigger: AGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCAGCAGCCCGCTTCTTaGGCCCTGGGCTGCGAACCC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLQQPAS*ALGCEP
Trigger: GGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTGCTGGTGCCGGACATaGTCCTCCAAGGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGICWCRT*SSKVPA
Trigger: GGCTGGGACCTTGGAGGATCATGTCCGGCACCAGCA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TCCACCAGGTCCCCATATCCTAGGGGTTTCCTTGCTCTGAGCAGTTTCACTGCAGCGCGCAAGTCGCTCTaGATATTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: STRSPYPRGFLALSSFTAARKSL*IFSSSF
Trigger: GAAGCTGCTGGAGAATATGCAGAGCGACTTGCGCGC...TGCAGTGAAACTGCTCAGAGCAAGGAAACCCCTAGGATATGGGGACCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCCCTCCCGGTGTCTCTaGTCCTTCAGCAGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIPSRCL*SFSSPL
Trigger: AAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGGG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAATGCGAACCCGGAGCCTaGTCGAGCGTCCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVCQVECCNKVPCAPIVECEPGA*SSVPQQ
Trigger: CTGCTGGGGGACGCTCGAGCAGGCTCCGGGTTCGCA...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCCCTCCCGGTGTCTCTaGTCCTTCAGCAGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLPSRCL*SFSSPL
Trigger: AAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGGG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCCAGACCTCAAGTAGATaGCCAGTCAGAGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPQTSSR*PVRGLH
Trigger: GTGGAGACCTCTGACTGGCCATCTACTTGAGGTCTG...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTGCTGGTGCCGGACATaGTCCTCCAAGGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFICWCRT*SSKVPA
Trigger: GGCTGGGACCTTGGAGGATCATGTCCGGCACCAGCA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCTGAGCTGTTCTCTTTCAGTGCTGAAAAAGGTCCACCAGGTCCCCATATCCTACTTCTTGCACTCCAGTaGCAAGGCGCGCAAGTCGCT +
Preference number: 4 (lower is better)
Translates to: SELFSFSAEKGPPGPHILLLALQ*QGAQVA
Trigger: AGCGACTTGCGCGCCTTGTCACTGGAGTGCAAGAAG...TAGGATATGGGGACCTGGTGGACCTTTTTCAGCACTGAAAGAGAACAGCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGATCTTGGGCCCTGGGCTaGGAACCCGGAGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRSWALG*EPGACS
Trigger: CGAGCAGGCTCCGGGTTCGCAGCCCAGGGCCCAAGA...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCCGGGAAGCAGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIPGSRG*SEPRSC
Trigger: GCACGATCTTGGCTCACTGCAACCTCTGCTTCCCGG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACCCTCCCGGTGTCTCTaGTCCTTCAGCAGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEPSRCL*SFSSPL
Trigger: AAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGGG...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCCGAGAGTTTGGATGCTaGCAGACCTCAAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPREFGC*QTSSRW
Trigger: CCATCTACTTGAGGTCTGCCAGCATCCAAACTCTCG...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTGCCCTGCACTCTTCCTaGCAGCAGGACGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTALHSS*QQDGDP
Trigger: TGGATCCCCGTCCTGCTGTCAGGAAGAGTGCAGGGC...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp GAGCTGTTCTCTTTCAGTGCTGAAAAAGGTCCACCAGGTCCCCATATCCTAGGGGTTCTCTTTCAGTGCTaGAAAAGGTCCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ELFSFSAEKGPPGPHILGVLFQC*KRSTRS
Trigger: GGACCTGGTGGACCTTTTTCAGCACTGAAAGAGAAC...CCCTAGGATATGGGGACCTGGTGGACCTTTTTCAGCACTGAAAGAGAACAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR GCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGATGCGAACCCGGAGCCTaGTCGAGCGTCCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGCEPGA*SSVPQQ
Trigger: CTGCTGGGGGACGCTCGAGCAGGCTCCGGGTTCGCA...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCACGTCTCAGCCCATTaGTTCTCGGCGGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLHVSAH*FSAVSL
Trigger: AAGGGACACCGCCGAGAAGCAATGGGCTGAGACGTG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGACCGCTTCTTGGGCCCTaGGCTGCGAACCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGPLLGP*AANPEP
Trigger: AGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGG...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAACCGCTTCTTGGGCCCTaGGCTGCGAACCCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEPLLGP*AANPEP
Trigger: AGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGG...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTCAGCAGCCCGCTTCTTaGGCCCTGGGCTGCGAACCC +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTQQPAS*ALGCEP
Trigger: GGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTG...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR CCA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCAGGTCTAGCAAACAATaGAATGCCACAGACATGGCG +
Preference number: 4 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPRSSKQ*NATDMA
Trigger: CGCCATGTCTGTGGCATTCCATTGTTTGCTAGACCT...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp CTGTCACAACCAACTGAAGACACTGGAATGCAGTTCGTATCAAGGATTCTCCTTCTTCTTGCACTCCAGTaGCAAGGCGCGCAAGTCGCT +
Preference number: 4 (lower is better)
Translates to: LSQPTEDTGMQFVSRILLLLALQ*QGAQVA
Trigger: AGCGACTTGCGCGCCTTGTCACTGGAGTGCAAGAAG...AAGGAGAATCCTTGATACGAACTGCATTCCAGTGTCTTCAGTTGGTTGTGACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCCACCAGGTCCCCATATCCTAGGGGTTTCCTTGCTCTGAGCAGTTTCACTGCAATTCAGCAGCCTCTTTaGCAGGTGGGAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: STRSPYPRGFLALSSFTAIQQPL*QVGISS
Trigger: AGAAGAAATTCCCACCTGTCAAAGAGGCTGCTGAAT...TGCAGTGAAACTGCTCAGAGCAAGGAAACCCCTAGGATATGGGGACCTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGGCATCAAGAAGGAGTaGGAGTGCAGCAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIGIKKE*ECSKKT
Trigger: GGTCTTCTTGCTGCACTCTCACTCCTTCTTGATGCC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCGCCCTGCACTCTTCCTaGCAGCAGGACGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCALHSS*QQDGDP
Trigger: TGGATCCCCGTCCTGCTGTCAGGAAGAGTGCAGGGC...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTGGCCTGCTCATGCCTaGTATGGGCCCTATAAGAAC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIWPAHA*YGPYKN
Trigger: GTTCTTATAGGGCCCATATCAGGCATGAGCAGGCCA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGGCGGGCAGATCACCTaGGGTCAGGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSGGQIT*GQEFKT
Trigger: AGTCTTGAACTCCTGACCTCAGGTGATCTGCCCGCC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGGCGGGCAGATCACCTaGGGTCAGGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIGGQIT*GQEFKT
Trigger: AGTCTTGAACTCCTGACCTCAGGTGATCTGCCCGCC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTATGCGAACCCGGAGCCTaGTCGAGCGTCCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVCEPGA*SSVPQQ
Trigger: CTGCTGGGGGACGCTCGAGCAGGCTCCGGGTTCGCA...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGCGCGCAAGTCGCTCTaGATATTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLARKSL*IFSSSF
Trigger: GAAGCTGCTGGAGAATATGCAGAGCGACTTGCGCGC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ACTCAAGTAATTCGAGGCCAAACGTCCGAGTCATTTCTGTCATGCCCACTAGCCAGCTTGGTTGCTTGTTaGAGGATTTCCAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: TQVIRGQTSESFLSCPLASLVAC*RISSRG
Trigger: CCCCCTACTGGAAATCCTGCAACAAGCAACCAAGCT...GGCTAGTGGGCATGACAGAAATGACTCGGACGTTTGGCCTCGAATTACTTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCACGTCTCAGCCCATTaGTTCTCGGCGGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSHVSAH*FSAVSL
Trigger: AAGGGACACCGCCGAGAAGCAATGGGCTGAGACGTG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCCAGAAGAAGCATGCTaGCGGGCAACAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQPEEAC*RATGSP
Trigger: TGGGCTACCTGTTGCCCGGCAGCATGCTTCTTCTGG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCCAGAAGAAGCATGCTaGCGGGCAACAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIPEEAC*RATGSP
Trigger: TGGGCTACCTGTTGCCCGGCAGCATGCTTCTTCTGG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATTTTCCAGAAGAAGCATaGTGCCGGGCAACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDFPEEA*CRATGS
Trigger: GCTACCTGTTGCCCGGCAGCATGCTTCTTCTGGAAA...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCTGAGCTGTTCTCTTTCAGTGCTGAAAAAGGTCCACCAGGTCCCCATATCCTAGGTACAAACAAGCTCTaGCACGGTCAGCTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: SELFSFSAEKGPPGPHILGTNKL*HGQLLR
Trigger: CCTAAGGAGCTGACCGTGCCAGAGCTTGTTTGTACC...TAGGATATGGGGACCTGGTGGACCTTTTTCAGCACTGAAAGAGAACAGCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR CCA 90 bp ACTCAAGTAATTCGAGGCCAAACGTCCGAGTCATTTCTGTCATGCCCACTAGCCCCAAGAACAGCCCCATaGCAATGCGCCAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: TQVIRGQTSESFLSCPLAPRTAP*QCAKLS
Trigger: ACTTAACTTGGCGCATTGCCATGGGGCTGTTCTTGG...GGCTAGTGGGCATGACAGAAATGACTCGGACGTTTGGCCTCGAATTACTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAATGCTGGTGCCGGACATaGTCCTCCAAGGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEECWCRT*SSKVPA
Trigger: GGCTGGGACCTTGGAGGATCATGTCCGGCACCAGCA...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp CCTGAGTTAGCTGGTGCTGAGACTGAGCCACCTAAATTATTGTTTCCAGCTTGGGCAGCCAAACATAGCTaGGTGATCTTCGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PELAGAETEPPKLLFPAWAAKHS*VIFGSL
Trigger: CAAGGAACCGAAGATCACTCAGCTATGTTTGGCTGC...CCAAGCTGGAAACAATAATTTAGGTGGCTCAGTCTCAGCACCAGCTAACTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp ACTGTAAATCCTGCTGTTCTGTCGACTGTGTTGGTGAAGAACCTTCTTCAGTGGTGGTGCTGGAGAAGATaGGGTGCTGGAACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TVNPAVLSTVLVKNLLQWWCWRR*GAGTLS
Trigger: AGACAAGGTTCCAGCACCTCATCTTCTCCAGCACCA...CCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTGGACTGCTAAAGGTTaGCCCACTGCCACAACTTGT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIWTAKG*PTATTC
Trigger: ACAAGTTGTGGCAGTGGGTCAACCTTTAGCAGTCCA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTGCGAACCCGGAGCCTaGTCGAGCGTCCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLCEPGA*SSVPQQ
Trigger: CTGCTGGGGGACGCTCGAGCAGGCTCCGGGTTCGCA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TCTGAGCTGTTCTCTTTCAGTGCTGAAAAAGGTCCACCAGGTCCCCATATCCTAGTGGGAATTTCTTCTTaGACTCCAGTGACAAGGCGC +
Preference number: 4 (lower is better)
Translates to: SELFSFSAEKGPPGPHILVGISS*TPVTRR
Trigger: GCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCAC...TAGGATATGGGGACCTGGTGGACCTTTTTCAGCACTGAAAGAGAACAGCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGCAATCAAATGGCGGTaGAGGGTGGAATGGCCGATT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLAIKWR*RVEWPI
Trigger: AATCGGCCATTCCACCCTGCACCGCCATTTGATTGC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAACACGTCTCAGCCCATTaGTTCTCGGCGGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TVCQVECCNKVPCAPIVEHVSAH*FSAVSL
Trigger: AAGGGACACCGCCGAGAAGCAATGGGCTGAGACGTG...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTTTCCAGAAGAAGCATaGTGCCGGGCAACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLFPEEA*CRATGS
Trigger: GCTACCTGTTGCCCGGCAGCATGCTTCTTCTGGAAA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTGTCACCAGCCAACCTaGCAAGAAGCTTCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSCHQPT*QEASAP
Trigger: TGGCGCTGAAGCTTCTTGCCAGGTTGGCTGGTGACA...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCAGCAGCCCGCTTCTTaGGCCCTGGGCTGCGAACCC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLQQPAS*ALGCEP
Trigger: GGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAACCCTCCCGGTGTCTCTaGTCCTTCAGCAGCCCGCTT +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEPSRCL*SFSSPL
Trigger: AAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGGG...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGGTACAAACAAGCTCTaGCACGGTCAGCTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLGTNKL*HGQLLR
Trigger: CCTAAGGAGCTGACCGTGCCAGAGCTTGTTTGTACC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCCAAGAACAGCCCCATaGCAATGCGCCAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIPRTAP*QCAKLS
Trigger: ACTTAACTTGGCGCATTGCCATGGGGCTGTTCTTGG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCCTCTGGGTGACCTCTaGGTGAACCAATCACACAGA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLPLGDL*VNQSHR
Trigger: TCTGTGTGATTGGTTCACCCAGAGGTCACCCAGAGG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTACCTTCTCAAGTAGATaGCCAGTCAGAGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGITFSSR*PVRGLH
Trigger: GTGGAGACCTCTGACTGGCCATCTACTTGAGAAGGT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641654.1
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAGGCTGTACAACCTCTaGGCTGTTCTCTTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLRLYNL*AVLFQC
Trigger: GCACTGAAAGAGAACAGCTCAGAGGTTGTACAGCCT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTACAGAATCTGTGTATTaGTTCCACCGCAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGITESVY*FHRNSS
Trigger: CGAGCTGTTGCGGTGGAATCAATACACAGATTCTGT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGGGCATCAAGAAGGAGTaGGAGTGCAGCAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQGIKKE*ECSKKT
Trigger: GGTCTTCTTGCTGCACTCTCACTCCTTCTTGATGCC...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGGCATCAAGAAGGAGTaGGAGTGCAGCAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIGIKKE*ECSKKT
Trigger: GGTCTTCTTGCTGCACTCTCACTCCTTCTTGATGCC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAGCCCTGCACTCTTCCTaGCAGCAGGACGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVALHSS*QQDGDP
Trigger: TGGATCCCCGTCCTGCTGTCAGGAAGAGTGCAGGGC...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp ACTCAAGTAATTCGAGGCCAAACGTCCGAGTCATTTCTGTCATGCCCACTAGCCCCCTTGAATGATGAATaGGAATATTGCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: TQVIRGQTSESFLSCPLAPLNDE*EYCHLQ
Trigger: CTGGAGGTGGCAATATTCTCATTCATCATTCAAGGG...GGCTAGTGGGCATGACAGAAATGACTCGGACGTTTGGCCTCGAATTACTTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp ACTCAAGTAATTCGAGGCCAAACGTCCGAGTCATTTCTGTCATGCCCACTAGCCTTTGCTGAGTGCTGCTaGCTGTATATGGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: TQVIRGQTSESFLSCPLAFAECC*LYMVKK
Trigger: CTTCTTGACCATATACAGTCAGCAGCACTCAGCAAA...GGCTAGTGGGCATGACAGAAATGACTCGGACGTTTGGCCTCGAATTACTTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGCTTATCTGAGTCTCTaGCAGGGGACACAATCTGTA +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIAYLSL*QGTQSV
Trigger: TACAGATTGTGTCCCCTGTCAGAGACTCAGATAAGC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAATGGCCTGCTCATGCCTaGTATGGGCCCTATAAGAAC +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEWPAHA*YGPYKN
Trigger: GTTCTTATAGGGCCCATATCAGGCATGAGCAGGCCA...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TCTGAGCTGTTCTCTTTCAGTGCTGAAAAAGGTCCACCAGGTCCCCATATCCTAGGGGTTTCCTTGCTCTaGGCAGTTTCACTGCATAAT +
Preference number: 4 (lower is better)
Translates to: SELFSFSAEKGPPGPHILGVSLL*AVSLHN
Trigger: ATTATGCAGTGAAACTGCTCAGAGCAAGGAAACCCC...TAGGATATGGGGACCTGGTGGACCTTTTTCAGCACTGAAAGAGAACAGCTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGTGGGAATTTCTTCTTaGACTCCAGTGACAAGGCGC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLVGISS*TPVTRR
Trigger: GCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCAC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAGCTTGGTTGCTTGTTaGAGGATTTCCAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLSLVAC*RISSRG
Trigger: CCCCCTACTGGAAATCCTGCAACAAGCAACCAAGCT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTACAGCCCCATGGCAATaGGCCAAGTTAAGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGITAPWQ*AKLSKV
Trigger: GACTTTACTTAACTTGGCGCATTGCCATGGGGCTGT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCAACACGCATTCTAACTaGTTGAGTCGAATATCTGGA +
Preference number: 4 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPNTHSN*LSRISG
Trigger: TCCAGATATTCGACTCAAGCAGTTAGAATGCGTGTT...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGACCAGAAGAAGCATGCTaGCGGGCAACAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRPEEAC*RATGSP
Trigger: TGGGCTACCTGTTGCCCGGCAGCATGCTTCTTCTGG...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTATCCCCGCAACACCTCTaGCTTTTCTCGGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVSPQHL*LFSEAP
Trigger: GGGCGCCTCCGAGAAAAGCCAGAGGTGTTGCGGGGA...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp ACTCAAGTAATTCGAGGCCAAACGTCCGAGTCATTTCTGTCATGCCCACTAGCCTTGTTAGAACTGTACTaGGTCCTTCTACAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TQVIRGQTSESFLSCPLALLELY*VLLQLS
Trigger: GGAGAGCTGTAGAAGGACCCAGTACAGTTCTAACAA...GGCTAGTGGGCATGACAGAAATGACTCGGACGTTTGGCCTCGAATTACTTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCAGACCTCAAGTAGATaGCCAGTCAGAGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSQTSSR*PVRGLH
Trigger: GTGGAGACCTCTGACTGGCCATCTACTTGAGGTCTG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp CCTGAGTTAGCTGGTGCTGAGACTGAGCCACCTAAATTATTGTTTCCAGCTTGGTCTCATTCGAGAGTTTaGATGCTGGCAGACCTCAAG +
Preference number: 4 (lower is better)
Translates to: PELAGAETEPPKLLFPAWSHSRV*MLADLK
Trigger: CTTGAGGTCTGCCAGCATCCAAACTCTCGAATGAGA...CCAAGCTGGAAACAATAATTTAGGTGGCTCAGTCTCAGCACCAGCTAACTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAGCAACTGCAGCCTCTaGTTTTGTGAGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLSNCSL*FCESGG
Trigger: TCCTCCACTCTCACAAAACCAGAGGCTGCAGTTGCT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTAATGGCGGTGCAGGGTaGAATGGCCGATTTAAAACA +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGINGGAG*NGRFKT
Trigger: TGTTTTAAATCGGCCATTCCACCCTGCACCGCCATT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTCTCATTCGAGAGTTTaGATGCTGGCAGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGISHSRV*MLADLL
Trigger: GAGAAGGTCTGCCAGCATCCAAACTCTCGAATGAGA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641654.1
CDS-3UTR TCA 90 bp TATGACTCCCAACTTTTGCAAGTCATCCATATTGAAACCAGTTTTTATGTGTTGTGCTGGTGCCGGACATaGTCCTCCAAGGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: YDSQLLQVIHIETSFYVLCWCRT*SSKVPA
Trigger: GGCTGGGACCTTGGAGGATCATGTCCGGCACCAGCA...CAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGCAGCCAAACATAGCTaGGTGATCTTCGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIAAKHS*VIFGSL
Trigger: CAAGGAACCGAAGATCACTCAGCTATGTTTGGCTGC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGACAGAATCTGTGTATTaGTTCCACCGCAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLTESVY*FHRNSS
Trigger: CGAGCTGTTGCGGTGGAATCAATACACAGATTCTGT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGCCCTGAACGGAATATaGTTTGTTGGAAAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIALNGI*FVGKCS
Trigger: GCTACACTTTCCAACAAATCATATTCCGTTCAGGGC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGCCACAACTTGTTGGTaGGATTCACTTGATGGACTT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIATTCW*DSLDGL
Trigger: AAGTCCATCAAGTGAATCTCACCAACAAGTTGTGGC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTGGACTGCTAAAGGTTaGCCCACTGCCACAACTTGT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIWTAKG*PTATTC
Trigger: ACAAGTTGTGGCAGTGGGTCAACCTTTAGCAGTCCA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAAGCATTACTGTCCCTTaGGGCTGGACTGCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAESITVP*GWTAKG
Trigger: ACCTTTAGCAGTCCAGCCTCAAGGGACAGTAATGCT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCCTCTGGTTTTGTaGGAGTGGAGGATCATGGTT +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEQPLVL*EWRIMV
Trigger: AACCATGATCCTCCACTCTCACAAAACCAGAGGCTG...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCAGCCTCTGGTTTTGTaGGAGTGGAGGATCATGGTT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIQPLVL*EWRIMV
Trigger: AACCATGATCCTCCACTCTCACAAAACCAGAGGCTG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGCCAAGACTGTCTCCCTaGCTCTGCAGAATCTGCAAC +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRPRLSP*LCRICN
Trigger: GTTGCAGATTCTGCAGAGTCAGGGAGACAGTCTTGG...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGCCCTGCACTCTTCCTaGCAGCAGGACGGGGATCCA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLALHSS*QQDGDP
Trigger: TGGATCCCCGTCCTGCTGTCAGGAAGAGTGCAGGGC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCCCTTGAATGATGAATaGGAATATTGCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIPLNDE*EYCHLQ
Trigger: CTGGAGGTGGCAATATTCTCATTCATCATTCAAGGG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTTTGCTGAGTGCTGCTaGCTGTATATGGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIFAECC*LYMVKK
Trigger: CTTCTTGACCATATACAGTCAGCAGCACTCAGCAAA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGCTTATCTGAGTCTCTaGCAGGGGACACAATCTGTA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLAYLSL*QGTQSV
Trigger: TACAGATTGTGTCCCCTGTCAGAGACTCAGATAAGC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTGCATGATCATATGGTaGGCTTATCCGCCACATATG +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGICMIIW*AYPPHM
Trigger: CATATGTGGCGGATAAGCTCACCATATGATCATGCA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGTGACTCTTGGAGGGTaGCAGGAAATATTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIVTLGG*QEIFWR
Trigger: CCTCCAGAATATTTCCTGTCACCCTCCAAGAGTCAC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCGCGCGCAAGTCGCTCTaGATATTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCARKSL*IFSSSF
Trigger: GAAGCTGCTGGAGAATATGCAGAGCGACTTGCGCGC...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAGCTTGGTTGCTTGTTaGAGGATTTCCAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFISLVAC*RISSRG
Trigger: CCCCCTACTGGAAATCCTGCAACAAGCAACCAAGCT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGACAGCCCCATGGCAATaGGCCAAGTTAAGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLTAPWQ*AKLSKV
Trigger: GACTTTACTTAACTTGGCGCATTGCCATGGGGCTGT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAAACAGAGTTTGCCCTaGACTCTTCCTGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIKQSLP*TLPDSR
Trigger: CCTGCTGTCAGGAAGAGTGCAGGGCAAACTCTGTTT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp CTGTCACAACCAACTGAAGACACTGGAATGCAGTTCGTATCAAGGATTCTCCTTAAACAGAGTTTGCCCTaGACTCTTCCTGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSQPTEDTGMQFVSRILLKQSLP*TLPDSR
Trigger: CCTGCTGTCAGGAAGAGTGCAGGGCAAACTCTGTTT...AAGGAGAATCCTTGATACGAACTGCATTCCAGTGTCTTCAGTTGGTTGTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAACACGTCTCAGCCCATTaGTTCTCGGCGGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEHVSAH*FSAVSL
Trigger: AAGGGACACCGCCGAGAAGCAATGGGCTGAGACGTG...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTTCTTACAAATGGCCTaGTCATGCCTGATATGGGCC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLFLQMA*SCLIWA
Trigger: GGCCCATATCAGGCATGAGCAGGCCATTTGTAAGAA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAGGTCTAGCAAACAATaGAATGCCACAGACATGGCG +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLRSSKQ*NATDMA
Trigger: CGCCATGTCTGTGGCATTCCATTGTTTGCTAGACCT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTCGAGAGTTTGGATGCTaGCAGACCTCAAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSREFGC*QTSSRW
Trigger: CCATCTACTTGAGGTCTGCCAGCATCCAAACTCTCG...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAGCAACTGCAGCCTCTaGTTTTGTGAGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFISNCSL*FCESGG
Trigger: TCCTCCACTCTCACAAAACCAGAGGCTGCAGTTGCT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCGAGAGTTTGGATGCTaGCAGACCTTCTCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLREFGC*QTFSSR
Trigger: TCTACTTGAGAAGGTCTGCCAGCATCCAAACTCTCG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641654.1
CDS-3UTR TCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACCTTCTTGCACTCCAGTaGCAAGGCGCGCAAGTCGCT +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNLLALQ*QGAQVA
Trigger: AGCGACTTGCGCGCCTTGTCACTGGAGTGCAAGAAG...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCCTGCGGAAAATCATTaGGGACTGACTCAAGTAATT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIPAENH*GLTQVI
Trigger: AATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGATGGTGCTGGAGAAGATaGGGTGCTGGAACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRWCWRR*GAGTLS
Trigger: AGACAAGGTTCCAGCACCTCATCTTCTCCAGCACCA...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACAGAATCTGTGTATTaGTTCCACCGCAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQTESVY*FHRNSS
Trigger: CGAGCTGTTGCGGTGGAATCAATACACAGATTCTGT...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATAATGACCTTAATAGTTaGGGCTGCACACAGAATCTG +
Preference number: 4 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDNDLNS*GCTQNL
Trigger: CAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATT...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTCTTCAGTGGTGGTTTaGCATTCTGTTTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGISSVVV*HSVSSS
Trigger: AGAGCTTGAAACAGAATGTCAAACCACCACTGAAGA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTGTCGACTGTGTTGGTaGAGAACCTTCTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFICRLCW*RTFFSG
Trigger: ACCACTGAAGAAGGTTCTTCACCAACACAGTCGACA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CATAGGACTGACAAAATGACCTTAATAGTTGAGGCTGCACACAGAATCTGTGTAGGCATCAAGAAGGAGTaGGAGTGCAGCAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: HRTDKMTLIVEAAHRICVGIKKE*ECSKKT
Trigger: GGTCTTCTTGCTGCACTCTCACTCCTTCTTGATGCC...TACACAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATTTTGTCAGTCCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTAGCATTACTGTCCCTTaGGGCTGGACTGCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTSITVP*GWTAKG
Trigger: ACCTTTAGCAGTCCAGCCTCAAGGGACAGTAATGCT...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTATCAAGGATTCTCCTTaGTCATTTCTGATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIIKDSP*SFLIAP
Trigger: GGGAGCAATCAGAAATGATCAAGGAGAATCCTTGAT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTCTGTCACAACCAACTaGAGACACTGGAATGCAGTT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLSVTTN*RHWNAV
Trigger: AACTGCATTCCAGTGTCTTCAGTTGGTTGTGACAGA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCTCGGCGGTGTCCCTTaGATGATGAATGAGAATATT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLLGGVP*MMNENI
Trigger: AATATTCTCATTCATCATTCAAGGGACACCGCCGAG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGATGGCCTGCTCATGCCTaGTATGGGCCCTATAAGAAC +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRWPAHA*YGPYKN
Trigger: GTTCTTATAGGGCCCATATCAGGCATGAGCAGGCCA...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCCTACAGCAGTCTCTTaGAAACTTGGTTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIPTAVS*KLGCPS
Trigger: AGATGGGCAACCAAGTTTTCAAGAGACTGCTGTAGG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGAGCATCTTGGCTGCTaGATCCCGTGTATTCATAAA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLEHLGC*IPCIHK
Trigger: TTTATGAATACACGGGATTCAGCAGCCAAGATGCTC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp CCTGAGTTAGCTGGTGCTGAGACTGAGCCACCTAAATTATTGTTTCCAGCTTGGTCATCTGTACCTCTTTaGCAGGTGGGAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PELAGAETEPPKLLFPAWSSVPL*QVGISS
Trigger: AGAAGAAATTCCCACCTGTCAAAGAGGTACAGATGA...CCAAGCTGGAAACAATAATTTAGGTGGCTCAGTCTCAGCACCAGCTAACTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTGCGCGCAAGTCGCTCTaGATATTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTARKSL*IFSSSF
Trigger: GAAGCTGCTGGAGAATATGCAGAGCGACTTGCGCGC...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR GCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTGTGGGAATTTCTTCTTaGACTCCAGTGACAAGGCGC +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTVGISS*TPVTRR
Trigger: GCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCAC...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp CCTGAGTTAGCTGGTGCTGAGACTGAGCCACCTAAATTATTGTTTCCAGCTTGGCCACTGTGGTTTATCTaGATCCAGAAATTTCACCAG +
Preference number: 4 (lower is better)
Translates to: PELAGAETEPPKLLFPAWPLWFI*IQKFHQ
Trigger: CTGGTGAAATTTCTGGATGCAGATAAACCACAGTGG...CCAAGCTGGAAACAATAATTTAGGTGGCTCAGTCTCAGCACCAGCTAACTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGTTGACTGTAAATCCTaGTGTTCTGTCGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIVDCKS*CSVDCV
Trigger: AACACAGTCGACAGAACAGCAGGATTTACAGTCAAC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAACAGCCCCATGGCAATaGGCCAAGTTAAGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAETAPWQ*AKLSKV
Trigger: GACTTTACTTAACTTGGCGCATTGCCATGGGGCTGT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGAGGCCAAAGCTACCTaGAACATCTACAACTATTTG +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIEAKAT*NIYNYL
Trigger: CAAATAGTTGTAGATGTTGCAGGTAGCTTTGGCCTC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCGCAATCAAATGGCGGTaGAGGGTGGAATGGCCGATT +
Preference number: 4 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCAIKWR*RVEWPI
Trigger: AATCGGCCATTCCACCCTGCACCGCCATTTGATTGC...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCTGCTAGTTTCCATGTaGTTTCAGAAGGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLLLVSM*FQKGRN
Trigger: ATTCCTGCCCTTCTGAAAGCACATGGAAACTAGCAG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GTTAATCCTGCTTTAATAAGAGAAGTTAAAGCTTCTGCTCCCCATTCTCTCATTCCAGAAGAAGCATGCTaGCGGGCAACAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: VNPALIREVKASAPHSLIPEEAC*RATGSP
Trigger: TGGGCTACCTGTTGCCCGGCAGCATGCTTCTTCTGG...AATGAGAGAATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGAGGCCAACAACAGCTaGCAAGAATTATCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLEANNS*QELSAV
Trigger: TACTGCAGATAATTCTTGGCAGCTGTTGTTGGCCTC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTAGGAACATACCTGGCTaGTGGCAATGCTTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSRNIPG*WQCFQR
Trigger: TCTCTGAAAGCATTGCCAGCAGCCAGGTATGTTCCT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAGGAACATACCTGGCTaGTGGCAATGCTTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIRNIPG*WQCFQR
Trigger: TCTCTGAAAGCATTGCCAGCAGCCAGGTATGTTCCT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTTGTCACCAGCCAACCTaGCAAGAAGCTTCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTCHQPT*QEASAP
Trigger: TGGCGCTGAAGCTTCTTGCCAGGTTGGCTGGTGACA...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAGGTCTAGCAAACAATaGAATGCCACAGACATGGCG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIRSSKQ*NATDMA
Trigger: CGCCATGTCTGTGGCATTCCATTGTTTGCTAGACCT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCAGCTTCATCTGTGCTaGCATCAAGAAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQQLHLC*HQEGVR
Trigger: TCTCACTCCTTCTTGATGCCAGCACAGATGAAGCTG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCAGCTTCATCTGTGCTaGCATCAAGAAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIQLHLC*HQEGVR
Trigger: TCTCACTCCTTCTTGATGCCAGCACAGATGAAGCTG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTTGTTAGAACTGTACTaGGTCCTTCTACAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLLLELY*VLLQLS
Trigger: GGAGAGCTGTAGAAGGACCCAGTACAGTTCTAACAA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTAACTCTGGATGCTGGTaGCTGCATGAAATCCTTAAA +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGINSGCW*LHEILK
Trigger: TTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CAA 72 bp CTTGCCCAAGGTCACACATTTAGTAAAATAACAGAGTaGGGATTTGCATCTAAGAAGCCTGGCCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: LAQGHTFSKITE*GFASKKPGPRL
Trigger: GAGTCTGGGGCCAGGCTTCTTAGATGCAAATCCCAACTCTGTTATTTTACTAAATGTGTGACCTTGGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR CAA 72 bp CAGCAGGACGGGGATCCACACATAGTTCACCCAATTTaGCATAAAGACATAACCACAAGCAATCAAATGGCG +
Preference number: 4 (lower is better)
Translates to: QQDGDPHIVHPI*HKDITTSNQMA
Trigger: CGCCATTTGATTGCTTGTGGTTATGTCTTTATGCAAAATTGGGTGAACTATGTGTGGATCCCCGTCCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 72 bp ATGAGAATATTGCCACCTCCAGACTCAATCTTTTCTTaGTCTGCAGTGGTAGAGGACTCTCGAACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: MRILPPPDSIFS*SAVVEDSRTLS
Trigger: GGACAGAGTTCGAGAGTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTCTGGAGGTGGCAATATTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCTTCTTGCACTCCAGTaGCAAGGCGCGCAAGTCGCT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLLLALQ*QGAQVA
Trigger: AGCGACTTGCGCGCCTTGTCACTGGAGTGCAAGAAG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAATTCAGCAGCCTCTTTaGCAGGTGGGAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEIQQPL*QVGISS
Trigger: AGAAGAAATTCCCACCTGTCAAAGAGGCTGCTGAAT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR TCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTGTGACATGAGTCTCTaGATAGCAGCCAAACATAGC +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSCDMSL*IAAKHS
Trigger: GCTATGTTTGGCTGCTATTCAGAGACTCATGTCACA...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGTGTGACATGAGTCTCTaGATAGCAGCCAAACATAGC +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQCDMSL*IAAKHS
Trigger: GCTATGTTTGGCTGCTATTCAGAGACTCATGTCACA...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTGTGACATGAGTCTCTaGATAGCAGCCAAACATAGC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFICDMSL*IAAKHS
Trigger: GCTATGTTTGGCTGCTATTCAGAGACTCATGTCACA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CCTGAGTTAGCTGGTGCTGAGACTGAGCCACCTAAATTATTGTTTCCAGCTTGGGAAAGTGCCTCATCATaGACTACTGTATTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: PELAGAETEPPKLLFPAWESASS*TTVLVV
Trigger: AACAACCAATACAGTAGTTCATGATGAGGCACTTTC...CCAAGCTGGAAACAATAATTTAGGTGGCTCAGTCTCAGCACCAGCTAACTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTTGGTGCTGGAGAAGATaGGGTGCTGGAACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTWCWRR*GAGTLS
Trigger: AGACAAGGTTCCAGCACCTCATCTTCTCCAGCACCA...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGCTTTAGCACTGCCTTaGACTGTGATTGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLALALP*TVIVRI
Trigger: TATTCTGACAATCACAGTTCAAGGCAGTGCTAAAGC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGACTCAATCTTTTCTTTGTCTGCAGTGGTAGAGGACTCTCGAACTCTGTCCAGTCTTCAGTGGTGGTTTaGCATTCTGTTTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RLNLFFVCSGRGLSNSVQSSVVV*HSVSSS
Trigger: AGAGCTTGAAACAGAATGTCAAACCACCACTGAAGA...CTGGACAGAGTTCGAGAGTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGCCCTGAACGGAATATaGTTTGTTGGAAAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSALNGI*FVGKCS
Trigger: GCTACACTTTCCAACAAATCATATTCCGTTCAGGGC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTCTGTCACAACCAACTaGAGACACTGGAATGCAGTT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFISVTTN*RHWNAV
Trigger: AACTGCATTCCAGTGTCTTCAGTTGGTTGTGACAGA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCCCTTGAATGATGAATaGGAATATTGCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQPLNDE*EYCHLQ
Trigger: CTGGAGGTGGCAATATTCTCATTCATCATTCAAGGG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTTTGCTGAGTGCTGCTaGCTGTATATGGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIFAECC*LYMVKK
Trigger: CTTCTTGACCATATACAGTCAGCAGCACTCAGCAAA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCTTCATTGTTTTTGCTaGGTGCTGCTGACTGTATAT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGILHCFC*VLLTVY
Trigger: ATATACAGTCAGCAGCACTCAGCAAAAACAATGAAG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp GCCTTGAACTGTGATTGTCAGAATAGGTATCCAGGTTCCCCTATATTCAAATGCGCTTATCTGAGTCTCTaGCAGGGGACACAATCTGTA +
Preference number: 4 (lower is better)
Translates to: ALNCDCQNRYPGSPIFKCAYLSL*QGTQSV
Trigger: TACAGATTGTGTCCCCTGTCAGAGACTCAGATAAGC...GCATTTGAATATAGGGGAACCTGGATACCTATTCTGACAATCACAGTTCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTACAGACAGACTTCAGTaGAAGCTTGGAGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSTDRLQ*KLGELF
Trigger: AAACAGCTCTCCAAGCTTTCACTGAAGTCTGTCTGT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGACTTGGTTGCCCATCTaGATTATTCTGTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLTWLPI*IILYLG
Trigger: CCCCAAATACAGAATAATTCAGATGGGCAACCAAGT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCAGCTCCACTTCTTATaGACAAGGAATAGGCACAAT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLQLHFL*TRNRHN
Trigger: ATTGTGCCTATTCCTTGTTCATAAGAAGTGGAGCTG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTAGCAATCCCATTTTGTaGGCATCTTGGCTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSSNPIL*ASWLLN
Trigger: ATTCAGCAGCCAAGATGCTCACAAAATGGGATTGCT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTATCATCCTAAACATGTaGCTCACTACTCGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIIILNM*LTTRKV
Trigger: GACTTTACGAGTAGTGAGTCACATGTTTAGGATGAT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGACTGCAGTACACACTaGGTAACGTACAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLDCSTH*VTYKFL
Trigger: CAAGAATTTGTACGTTACTCAGTGTGTACTGCAGTC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAGTGGGAATTTCTTCTTaGACTCCAGTGACAAGGCGC +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRVGISS*TPVTRR
Trigger: GCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCAC...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGTTCTCTTTCAGTGCTaGCAAAATTTCAGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIVLFQC*QNFSVS
Trigger: CGAAACACTGAAATTTTGGCAGCACTGAAAGAGAAC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTAATTATATTTCCAGCTaGAGTCTCAGACACGACTTC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGINYISS*SLRHDF
Trigger: GAAGTCGTGTCTGAGACTGCAGCTGGAAATATAATT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATGATTGCCTTAGAAAGTaGCTCATCATGAACTACTGT +
Preference number: 4 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDDCLRK*LIMNYC
Trigger: ACAGTAGTTCATGATGAGGCACTTTCTAAGGCAATC...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGTTGGAAAGTGTAGCTaGAGTGGTGGTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLVGKCS*SGGIQY
Trigger: GTATTGAATACCACCACTGCAGCTACACTTTCCAAC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAATTCGAGAGTTTGGATaGTGGCAGACCTCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEIREFG*WQTSSR
Trigger: TCTACTTGAGGTCTGCCAGCATCCAAACTCTCGAAT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTAACTCCTTTCTCTTCTaGCTGCTTTTGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTNSFLF*LLLLCC
Trigger: GCAGCACAGCAAAAGCAGGCAGAAGAGAAAGGAGTT...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGTGTGCCAGGTTGAATaGTGTAATAAAGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLVCQVE*CNKVPC
Trigger: GCATGGAACTTTATTACAGCATTCAACCTGGCACAC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAATTCTTACAAATGGCCTaGTCATGCCTGATATGGGCC +
Preference number: 4 (lower is better)
Translates to: TVCQVECCNKVPCAPIVEFLQMA*SCLIWA
Trigger: GGCCCATATCAGGCATGAGCAGGCCATTTGTAAGAA...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGCTGGATACATTATCTaGATGTTTTCTGGTCCTACA +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIAGYII*MFSGPT
Trigger: TGTAGGACCAGAAAACATGCAGATAATGTATCCAGC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAATTTCCAGAAGAAGCATaGTGCCGGGCAACAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEFPEEA*CRATGS
Trigger: GCTACCTGTTGCCCGGCAGCATGCTTCTTCTGGAAA...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCTGGATGCTGGTGGCTaGATGAAATCCTTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFILDAGG*MKSLKG
Trigger: TCCTTTTAAGGATTTCATGCAGCCACCAGCATCCAG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGGGCAATGTGTTCCATaGCAGCAATCAATTACTGTA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLGQCVP*QQSITV
Trigger: TACAGTAATTGATTGCTGGCATGGAACACATTGCCC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGATCTGAAGCAGGAAACTaGTTGAACCCGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRSEAGN*LNPGSR
Trigger: TCTGCTTCCCGGGTTCAAGCAGTTTCCTGCTTCAGA...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCCTGGCTGCTGGCAATaGTTTCAGAGATCATTTTTG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIPGCWQ*FQRSFL
Trigger: CAAAAATGATCTCTGAAAGCATTGCCAGCAGCCAGG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTAAAGCAAATGAAATTTaGACAGTTGGGTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIKANEI*TVGSEA
Trigger: GGCTTCAGACCCAACTGTGCAAATTTCATTTGCTTT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp GAGCTGTTCTCTTTCAGTGCTGAAAAAGGTCCACCAGGTCCCCATATCCTAGGGGTTTCACTGCATAATTaGAGTTTTTATCCTGCCAAA +
Preference number: 4 (lower is better)
Translates to: ELFSFSAEKGPPGPHILGVSLHN*SFYPAK
Trigger: TTTGGCAGGATAAAAACTGCAATTATGCAGTGAAAC...CCCTAGGATATGGGGACCTGGTGGACCTTTTTCAGCACTGAAAGAGAACAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR CCA 90 bp GATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTTTCATATGTCACCAGCCAACCTaGCAAGAAGCTTCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: DPSAFTISRKTLVECCFICHQPT*QEASAP
Trigger: TGGCGCTGAAGCTTCTTGCCAGGTTGGCTGGTGACA...TATGAAACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGACCTTCAGGTATAGTTaGAGGCTCAACTTTGTCCAA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLTFRYS*RLNFVQ
Trigger: TTGGACAAAGTTGAGCCTCCAACTATACCTGAAGGT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTTGTTAGAACTGTACTaGGTCCTTCTACAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFILLELY*VLLQLS
Trigger: GGAGAGCTGTAGAAGGACCCAGTACAGTTCTAACAA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGTTGTTAGAACTGTACTaGGTCCTTCTACAGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQLLELY*VLLQLS
Trigger: GGAGAGCTGTAGAAGGACCCAGTACAGTTCTAACAA...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCAGCAACTGCAGCCTCTaGTTTTGTGAGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCSNCSL*FCESGG
Trigger: TCCTCCACTCTCACAAAACCAGAGGCTGCAGTTGCT...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTATCTGCATGTTTTCTaGTCCTACACAAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIYLHVF*SYTNGL
Trigger: AAGGCCATTTGTGTAGGACCAGAAAACATGCAGATA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATCGATGTAGTACATCTTaGGACCTCTTTAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDRCSTS*DLFKST
Trigger: AGTGCTTTTAAAGAGGTCCCAAGATGTACTACATCG...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTTGAACTCTGGATGCTaGTGGCTGCATGAAATCCTT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFILNSGC*WLHEIL
Trigger: AAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGTAATCCCAGCTACTTaGAAGTCTGAAGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSVIPAT*KSEAGN
Trigger: GTTTCCTGCTTCAGACTTCCAAGTAGCTGGGATTAC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGTAAGTGTTCTGCCTTaGCTAGACAGACTTCACCTA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIVSVLP*LDRLHL
Trigger: TAGGTGAAGTCTGTCTAGCCAAGGCAGAACACTTAC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAACATACCTGGCTGCTaGCAATGCTTTCAGAGATCA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFINIPGC*QCFQRS
Trigger: TGATCTCTGAAAGCATTGCCAGCAGCCAGGTATGTT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGCAAAAACGCAACAGTaGCCAAAGTGCAAAGTATTT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIAKTQQ*PKCKVF
Trigger: AAATACTTTGCACTTTGGCCACTGTTGCGTTTTTGC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAAAGGCTGTACAACCTCTaGGCTGTTCTCTTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEERLYNL*AVLFQC
Trigger: GCACTGAAAGAGAACAGCTCAGAGGTTGTACAGCCT...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCCCAAACATAGCTGAGTaGTCTTCGGTTCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCPNIAE*SSVPWF
Trigger: GAACCAAGGAACCGAAGATCACTCAGCTATGTTTGG...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAAGCAGCCAAACATAGCTaGGTGATCTTCGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEAAKHS*VIFGSL
Trigger: CAAGGAACCGAAGATCACTCAGCTATGTTTGGCTGC...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGAAAGTGCCTCATCATaGACTACTGTATTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLESASS*TTVLVV
Trigger: AACAACCAATACAGTAGTTCATGATGAGGCACTTTC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTCAGCATTAACCAACTaGCAAAGATCCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFISALTN*QRSWKS
Trigger: GCTTTTCCAGGATCTTTGTCAGTTGGTTAATGCTGA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCCTGCGGAAAATCATTaGGGACTGACTCAAGTAATT +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQPAENH*GLTQVI
Trigger: AATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCCTGCGGAAAATCATTaGGGACTGACTCAAGTAATT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIPAENH*GLTQVI
Trigger: AATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTAATGACCTTAATAGTTaGGGCTGCACACAGAATCTG +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSNDLNS*GCTQNL
Trigger: CAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGAATGACCTTAATAGTTaGGGCTGCACACAGAATCTG +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQNDLNS*GCTQNL
Trigger: CAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATT...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ACTGTAAATCCTGCTGTTCTGTCGACTGTGTTGGTGAAGAACCTTCTTCAGTGGCTTCAATCATACTTGTaGTTCCACGAACAAGGTCTA +
Preference number: 4 (lower is better)
Translates to: TVNPAVLSTVLVKNLLQWLQSYL*FHEQGL
Trigger: TAGACCTTGTTCGTGGAATCACAAGTATGATTGAAG...CCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGATGTCGACTGTGTTGGTaGAGAACCTTCTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRCRLCW*RTFFSG
Trigger: ACCACTGAAGAAGGTTCTTCACCAACACAGTCGACA...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp AGACTCAATCTTTTCTTTGTCTGCAGTGGTAGAGGACTCTCGAACTCTGTCCAGATAACACTTTGGCCCTaGACGGAATATGATTTGTTG +
Preference number: 4 (lower is better)
Translates to: RLNLFFVCSGRGLSNSVQITLWP*TEYDLL
Trigger: CAACAAATCATATTCCGTTCAGGGCCAAAGTGTTAT...CTGGACAGAGTTCGAGAGTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGATAACACTTTGGCCCTaGACGGAATATGATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLITLWP*TEYDLL
Trigger: CAACAAATCATATTCCGTTCAGGGCCAAAGTGTTAT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATTTGGTGAGATTCACTTaGTGGACTTATCATCATAAC +
Preference number: 4 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDLVRFT*WTYHHN
Trigger: GTTATGATGATAAGTCCATCAAGTGAATCTCACCAA...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTTGGTGAGATTCACTTaGTGGACTTATCATCATAAC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGILVRFT*WTYHHN
Trigger: GTTATGATGATAAGTCCATCAAGTGAATCTCACCAA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGATGGACTGCTAAAGGTTaGCCCACTGCCACAACTTGT +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGWTAKG*PTATTC
Trigger: ACAAGTTGTGGCAGTGGGTCAACCTTTAGCAGTCCA...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTCGCATTCTAACTGCTTaGGTCGAATATCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSRILTA*VEYLDD
Trigger: ATCATCCAGATATTCGACTCAAGCAGTTAGAATGCG...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCGCATTCTAACTGCTTaGGTCGAATATCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQRILTA*VEYLDD
Trigger: ATCATCCAGATATTCGACTCAAGCAGTTAGAATGCG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCGCATTCTAACTGCTTaGGTCGAATATCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIRILTA*VEYLDD
Trigger: ATCATCCAGATATTCGACTCAAGCAGTTAGAATGCG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACCCAAGACTGTCTCCCTaGCTCTGCAGAATCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNPRLSP*LCRICN
Trigger: GTTGCAGATTCTGCAGAGTCAGGGAGACAGTCTTGG...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTATCAAGGATTCTCCTTaGTCATTTCTGATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIIKDSP*SFLIAP
Trigger: GGGAGCAATCAGAAATGATCAAGGAGAATCCTTGAT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGATCAAGGATTCTCCTTaGTCATTTCTGATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQIKDSP*SFLIAP
Trigger: GGGAGCAATCAGAAATGATCAAGGAGAATCCTTGAT...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGCTCGGCGGTGTCCCTTaGATGATGAATGAGAATATT +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRLGGVP*MMNENI
Trigger: AATATTCTCATTCATCATTCAAGGGACACCGCCGAG...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTCATTGCTGATAAGTTaGACTACCTCGACATCAATA +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGISLLIS*TTSTSI
Trigger: TATTGATGTCGAGGTAGTTCAACTTATCAGCAATGA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGACTCAATCTTTTCTTTGTCTGCAGTGGTAGAGGACTCTCGAACTCTGTCCAGCTGAAGAAGAACAGGTaGTGCATTCTACTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RLNLFFVCSGRGLSNSVQLKKNR*CILLKL
Trigger: CAACTTTAGTAGAATGCATCACCTGTTCTTCTTCAG...CTGGACAGAGTTCGAGAGTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTGTTGTCCAGCAATATaGATAAAACAGGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFICCPAI*IKQALA
Trigger: TGCCAGTGCCTGTTTTATTCATATTGCTGGACAACA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAAATACTATGTGGCATaGACTCCCATTCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLKYYVA*TPILLM
Trigger: CATGAGAAGAATGGGAGTTCATGCCACATAGTATTT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGAGATGGAAAGCAAATaGAATTTGCACAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIEMESK*NLHSWV
Trigger: GACCCAACTGTGCAAATTTCATTTGCTTTCCATCTC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCAACCCCCTAATCCTTaGCTCTTCTGTAAAATGAAA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLQPPNP*LFCKMK
Trigger: TTTCATTTTACAGAAGAGTCAAGGATTAGGGGGTTG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAGTATTCCAAATAGGCTaGTACAAGCATTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEVFQIG*YKHSQA
Trigger: AGCCTGAGAATGCTTGTATCAGCCTATTTGGAATAC...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGCGCGCAAGTCGCTCTaGATATTCTCCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLARKSL*IFSSSF
Trigger: GAAGCTGCTGGAGAATATGCAGAGCGACTTGCGCGC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCAGCAACCATCCTCTCAAAGTGGGAATTTCTTCTTaGACTCCAGTGACAAGGCGC +
Preference number: 4 (lower is better)
Translates to: WLFYNISVSFIFSNHPLKVGISS*TPVTRR
Trigger: GCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCAC...TTTGAGAGGATGGTTGCTGAAGATGAACGACACAGAGATATTATAGAACAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGCTGTTCTCTTTCAGTaGTGCCAAAATTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLAVLFQ*CQNFSV
Trigger: AACACTGAAATTTTGGCAGCACTGAAAGAGAACAGC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGATTGCCTTAGAAAGTaGCTCATCATGAACTACTGT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLDCLRK*LIMNYC
Trigger: ACAGTAGTTCATGATGAGGCACTTTCTAAGGCAATC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTGTTGTAAAAAGACCTaGGGAAAATCATTGAGGACT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGICCKKT*GKSLRT
Trigger: AGTCCTCAATGATTTTCCGCAGGTCTTTTTACAACA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAAAGCTTGGTTGCTTGTTaGAGGATTTCCAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEESLVAC*RISSRG
Trigger: CCCCCTACTGGAAATCCTGCAACAAGCAACCAAGCT...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTGTTGACTGTAAATCCTaGTGTTCTGTCGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSVDCKS*CSVDCV
Trigger: AACACAGTCGACAGAACAGCAGGATTTACAGTCAAC...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGGTTGACTGTAAATCCTaGTGTTCTGTCGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQVDCKS*CSVDCV
Trigger: AACACAGTCGACAGAACAGCAGGATTTACAGTCAAC...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGGAACCTTTGCATATTaGAGTTATAAAGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIGTFAY*SYKGIS
Trigger: AGAGATGCCTTTATAACTGCAATATGCAAAGGTTCC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTGTTGGAAAGTGTAGCTaGAGTGGTGGTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSVGKCS*SGGIQY
Trigger: GTATTGAATACCACCACTGCAGCTACACTTTCCAAC...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAGTTGGAAAGTGTAGCTaGAGTGGTGGTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEVGKCS*SGGIQY
Trigger: GTATTGAATACCACCACTGCAGCTACACTTTCCAAC...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTGTTGCCAAGACAAGTTaGCATGATGTTCCAAGAACA +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSVAKTS*HDVPRT
Trigger: TGTTCTTGGAACATCATGGCAACTTGTCTTGGCAAC...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGTTGCCAAGACAAGTTaGCATGATGTTCCAAGAACA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIVAKTS*HDVPRT
Trigger: TGTTCTTGGAACATCATGGCAACTTGTCTTGGCAAC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAAATTCGAGAGTTTGGATaGTGGCAGACCTCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: TVCQVECCNKVPCAPIVEIREFG*WQTSSR
Trigger: TCTACTTGAGGTCTGCCAGCATCCAAACTCTCGAAT...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTTCAATAAAAGCAACTaGAGCCTCTGGTTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLFNKSN*SLWFCE
Trigger: CTCACAAAACCAGAGGCTGCAGTTGCTTTTATTGAA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCTGAAGACACTGGAATaGAGTTCGTATCAAGGATTC +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQLKTLE*SSYQGF
Trigger: GAATCCTTGATACGAACTGCATTCCAGTGTCTTCAG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGAGGCCAAAGCTACCTaGAACATCTACAACTATTTG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIEAKAT*NIYNYL
Trigger: CAAATAGTTGTAGATGTTGCAGGTAGCTTTGGCCTC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTAAACAGAGTTTGCCCTaGACTCTTCCTGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTKQSLP*TLPDSR
Trigger: CCTGCTGTCAGGAAGAGTGCAGGGCAAACTCTGTTT...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR GCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTGTAGAAAACAGAGTTTaGCCTGCACTCTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTVENRV*PALFLT
Trigger: TGTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTAC...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTGTGTGCCAGGTTGAATaGTGTAATAAAGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSVCQVE*CNKVPC
Trigger: GCATGGAACTTTATTACAGCATTCAACCTGGCACAC...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTAAATCTCCTAAAGGCTaGAGCAAATATCTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIKSPKG*SKYLLV
Trigger: CACTAGAAGATATTTGCTGCAGCCTTTAGGAGATTT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAGGGGGCCACCCACTTaGTTCACACTAAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLRGPPT*FTLRLA
Trigger: TGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTGTCACCAGCCAACCTaGCAAGAAGCTTCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLCHQPT*QEASAP
Trigger: TGGCGCTGAAGCTTCTTGCCAGGTTGGCTGGTGACA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACGGTACAAACAAGCTCTaGCACGGTCAGCTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNGTNKL*HGQLLR
Trigger: CCTAAGGAGCTGACCGTGCCAGAGCTTGTTTGTACC...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACCTTCAGGTATAGTTaGAGGCTCAACTTTGTCCAA +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQTFRYS*RLNFVQ
Trigger: TTGGACAAAGTTGAGCCTCCAACTATACCTGAAGGT...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGACAGCTTCATCTGTGCTaGCATCAAGAAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRQLHLC*HQEGVR
Trigger: TCTCACTCCTTCTTGATGCCAGCACAGATGAAGCTG...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTACACTGGATATTTTTaGAAGTCAGCATTACTGTCC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIYTGYF*KSALLS
Trigger: GGACAGTAATGCTGACTTCCAAAAATATCCAGTGTA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTCCAAGAACAGCCCCATaGCAATGCGCCAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTPRTAP*QCAKLS
Trigger: ACTTAACTTGGCGCATTGCCATGGGGCTGTTCTTGG...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR CCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACCAGACCTCAAGTAGATaGCCAGTCAGAGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNQTSSR*PVRGLH
Trigger: GTGGAGACCTCTGACTGGCCATCTACTTGAGGTCTG...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAAGCAACTGCAGCCTCTaGTTTTGTGAGAGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGSNCSL*FCESGG
Trigger: TCCTCCACTCTCACAAAACCAGAGGCTGCAGTTGCT...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGCTGCTGACTGTATATaGTCAAGAAGAACATCCCAA +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSAADCI*SRRTSQ
Trigger: TTGGGATGTTCTTCTTGACCATATACAGTCAGCAGC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAGCTGCTGACTGTATATaGTCAAGAAGAACATCCCAA +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEAADCI*SRRTSQ
Trigger: TTGGGATGTTCTTCTTGACCATATACAGTCAGCAGC...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGCTGCTGACTGTATATaGTCAAGAAGAACATCCCAA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIAADCI*SRRTSQ
Trigger: TTGGGATGTTCTTCTTGACCATATACAGTCAGCAGC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTACACAAATGGCCTTTTaGAGAACATCTAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGITQMAF*RTSKAV
Trigger: TACAGCTTTAGATGTTCTCCAAAAGGCCATTTGTGT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCAGCTGTCCATACTGTaGAGGTTTACAGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQQLSIL*RFTGKF
Trigger: GAATTTTCCTGTAAACCTCCACAGTATGGACAGCTG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCAGCTGTCCATACTGTaGAGGTTTACAGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIQLSIL*RFTGKF
Trigger: GAATTTTCCTGTAAACCTCCACAGTATGGACAGCTG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTAATCTTCAAAAGTATTaGCTAGTTCTGGCCACATAC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGINLQKY*LVLATY
Trigger: GTATGTGGCCAGAACTAGCCAATACTTTTGAAGATT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTGTTACTTGTTGCCTTaGAAGAGGGCATTTACCACT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFICYLLP*KRAFTT
Trigger: AGTGGTAAATGCCCTCTTCCAAGGCAACAAGTAACA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAACTCTGGATGCTGGTaGCTGCATGAAATCCTTAAA +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFINSGCW*LHEILK
Trigger: TTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGTTGAACTCTGGATGCTaGTGGCTGCATGAAATCCTT +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRLNSGC*WLHEIL
Trigger: AAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAA...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTAATGCCAAACCTAAGTaGAAATCTAAGGAACATACC +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGINAKPK*KSKEHT
Trigger: GGTATGTTCCTTAGATTTCCACTTAGGTTTGGCATT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCCTGGCCCCAGACTCTaGGCTCTTAACCACAATGCT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLPGPRL*ALNHNA
Trigger: AGCATTGTGGTTAAGAGCCCAGAGTCTGGGGCCAGG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTATTCTTAACATTCAGTaGTTGTCTGGTGAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGIILNIQ*LSGERQ
Trigger: TTGCCTTTCACCAGACAACCACTGAATGTTAAGAAT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAAGGCTGTACAACCTCTaGGCTGTTCTCTTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVRLYNL*AVLFQC
Trigger: GCACTGAAAGAGAACAGCTCAGAGGTTGTACAGCCT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TTGGAAGAGGGCATTTACCACTTAATCTTTCATCCTCTATATAGCGATGTAGTAAGGCTGTACAACCTCTaGGCTGTTCTCTTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: LEEGIYHLIFHPLYSDVVRLYNL*AVLFQC
Trigger: GCACTGAAAGAGAACAGCTCAGAGGTTGTACAGCCT...TACTACATCGCTATATAGAGGATGAAAGATTAAGTGGTAAATGCCCTCTTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTCCAAACATAGCTGAGTaGTCTTCGGTTCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTPNIAE*SSVPWF
Trigger: GAACCAAGGAACCGAAGATCACTCAGCTATGTTTGG...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGAAAGTGCCTCATCATaGACTACTGTATTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSESASS*TTVLVV
Trigger: AACAACCAATACAGTAGTTCATGATGAGGCACTTTC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTGGTGCTGGAGAAGATaGGGTGCTGGAACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLWCWRR*GAGTLS
Trigger: AGACAAGGTTCCAGCACCTCATCTTCTCCAGCACCA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCTTCAATCATACTTGTaGTTCCACGAACAAGGTCTA +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSLQSYL*FHEQGL
Trigger: TAGACCTTGTTCGTGGAATCACAAGTATGATTGAAG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCTTCAATCATACTTGTaGTTCCACGAACAAGGTCTA +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQLQSYL*FHEQGL
Trigger: TAGACCTTGTTCGTGGAATCACAAGTATGATTGAAG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTTGTCGACTGTGTTGGTaGAGAACCTTCTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTCRLCW*RTFFSG
Trigger: ACCACTGAAGAAGGTTCTTCACCAACACAGTCGACA...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR TCA 90 bp GTTAATCCTGCTTTAATAAGAGAAGTTAAAGCTTCTGCTCCCCATTCTCTCATTTGGACTGCTAAAGGTTaGCCCACTGCCACAACTTGT +
Preference number: 4 (lower is better)
Translates to: VNPALIREVKASAPHSLIWTAKG*PTATTC
Trigger: ACAAGTTGTGGCAGTGGGTCAACCTTTAGCAGTCCA...AATGAGAGAATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAAGCATTACTGTCCCTTaGGGCTGGACTGCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVSITVP*GWTAKG
Trigger: ACCTTTAGCAGTCCAGCCTCAAGGGACAGTAATGCT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp ACTGTAAATCCTGCTGTTCTGTCGACTGTGTTGGTGAAGAACCTTCTTCAGTGGAGTCGAATATCTGGATaGTTAATATTGGACATCTCC +
Preference number: 4 (lower is better)
Translates to: TVNPAVLSTVLVKNLLQWSRISG*LILDIS
Trigger: GGAGATGTCCAATATTAATCATCCAGATATTCGACT...CCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTCGCATTCTAACTGCTTaGGTCGAATATCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTRILTA*VEYLDD
Trigger: ATCATCCAGATATTCGACTCAAGCAGTTAGAATGCG...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCCAAGACTGTCTCCCTaGCTCTGCAGAATCTGCAAC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLPRLSP*LCRICN
Trigger: GTTGCAGATTCTGCAGAGTCAGGGAGACAGTCTTGG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCTTCATTGTTTTTGCTaGGTGCTGCTGACTGTATAT +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQLHCFC*VLLTVY
Trigger: ATATACAGTCAGCAGCACTCAGCAAAAACAATGAAG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCTTCATTGTTTTTGCTaGGTGCTGCTGACTGTATAT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFILHCFC*VLLTVY
Trigger: ATATACAGTCAGCAGCACTCAGCAAAAACAATGAAG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAAGCTTATCTGAGTCTCTaGCAGGGGACACAATCTGTA +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEAYLSL*QGTQSV
Trigger: TACAGATTGTGTCCCCTGTCAGAGACTCAGATAAGC...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGTAAATGAAGATGACTaGGAATGTATTGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIVNEDD*ECIEPL
Trigger: CAAGGGCTCAATACATTCTCAGTCATCTTCATTTAC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGGTAAATGAAGATGACTaGGAATGTATTGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQVNEDD*ECIEPL
Trigger: CAAGGGCTCAATACATTCTCAGTCATCTTCATTTAC...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCTGAAGAAGAACAGGTaGTGCATTCTACTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSLKKNR*CILLKL
Trigger: CAACTTTAGTAGAATGCATCACCTGTTCTTCTTCAG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCTGAAGAAGAACAGGTaGTGCATTCTACTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFILKKNR*CILLKL
Trigger: CAACTTTAGTAGAATGCATCACCTGTTCTTCTTCAG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTATAAGGAAACCGCTTTaGAAAGTCAACATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSIRKPL*KVNMPR
Trigger: TCTAGGCATGTTGACTTTTCAAAGCGGTTTCCTTAT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCAATTGACCTCTGGGTaGCCTCTGGGTGAACCAATC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLQLTSG*PLGEPI
Trigger: GATTGGTTCACCCAGAGGTCACCCAGAGGTCAATTG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTTCTTTCTAAACTATTaGGAGACACTTCGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLFFLNY*ETLRVF
Trigger: GAAGACACGAAGTGTCTCTCAATAGTTTAGAAAGAA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAGAGATAGTCTGGCATTaGTATGGACAGGCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNREIVWH*YGQAVS
Trigger: TGAAACTGCCTGTCCATATCAATGCCAGACTATCTC...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTATATGCGGTTTCCTTaGCTAGCTGTAATAAGCACT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIYMRFP*LAVIST
Trigger: AGTGCTTATTACAGCTAGTCAAGGAAACCGCATATA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCAAGCATTCTCAGGCTaGGTTTTCTTAAGTGAATCA +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQQAFSG*VFLSES
Trigger: TGATTCACTTAAGAAAACTCAGCCTGAGAATGCTTG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR GCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAGTTCTCTTTCAGTGCTaGCAAAATTTCAGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEVLFQC*QNFSVS
Trigger: CGAAACACTGAAATTTTGGCAGCACTGAAAGAGAAC...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp ACCTTCCAGATAACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCAGTTCTCTTTCAGTGCTaGCAAAATTTCAGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: TFQITVCQVECCNKVPCAVLFQC*QNFSVS
Trigger: CGAAACACTGAAATTTTGGCAGCACTGAAAGAGAAC...TGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGCTGTTCTCTTTCAGTaGTGCCAAAATTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIAVLFQ*CQNFSV
Trigger: AACACTGAAATTTTGGCAGCACTGAAAGAGAACAGC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTAATTATATTTCCAGCTaGAGTCTCAGACACGACTTC +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSNYISS*SLRHDF
Trigger: GAAGTCGTGTCTGAGACTGCAGCTGGAAATATAATT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGCCACTGTGGTTTATCTaGATCCAGAAATTTCACCAG +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRPLWFI*IQKFHQ
Trigger: CTGGTGAAATTTCTGGATGCAGATAAACCACAGTGG...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp GCCTTGAACTGTGATTGTCAGAATAGGTATCCAGGTTCCCCTATATTCAAATGCGTTGGAAAGTGTAGCTaGAGTGGTGGTATTCAATAC +
Preference number: 4 (lower is better)
Translates to: ALNCDCQNRYPGSPIFKCVGKCS*SGGIQY
Trigger: GTATTGAATACCACCACTGCAGCTACACTTTCCAAC...GCATTTGAATATAGGGGAACCTGGATACCTATTCTGACAATCACAGTTCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTTCAATAAAAGCAACTaGAGCCTCTGGTTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIFNKSN*SLWFCE
Trigger: CTCACAAAACCAGAGGCTGCAGTTGCTTTTATTGAA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAAACACGCATTCTAACTaGTTGAGTCGAATATCTGGA +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAENTHSN*LSRISG
Trigger: TCCAGATATTCGACTCAAGCAGTTAGAATGCGTGTT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGCAATCAAATGGCGGTaGAGGGTGGAATGGCCGATT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLAIKWR*RVEWPI
Trigger: AATCGGCCATTCCACCCTGCACCGCCATTTGATTGC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTTCCAGATAACAGTGTaGCAGGTTGAATGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIFQITV*QVECCN
Trigger: ATTACAGCATTCAACCTGGCACACTGTTATCTGGAA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAATTCTTACAAATGGCCTaGTCATGCCTGATATGGGCC +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEFLQMA*SCLIWA
Trigger: GGCCCATATCAGGCATGAGCAGGCCATTTGTAAGAA...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGACTGAAATAGCACTGTaGAATATGACTCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLTEIAL*NMTPNF
Trigger: AAAGTTGGGAGTCATATTGCACAGTGCTATTTCAGT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAGCTGGATACATTATCTaGATGTTTTCTGGTCCTACA +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEAGYII*MFSGPT
Trigger: TGTAGGACCAGAAAACATGCAGATAATGTATCCAGC...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTTTCTCATTCACCACTaGTTTGTGACACGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIFLIHH*FVTRCF
Trigger: AAAACAGCGTGTCACAAAGCAGTGGTGAATGAGAAA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTATTTTGAACTCTGGATaGTGGTGGCTGCATGAAATC +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTILNSG*WWLHEI
Trigger: GATTTCATGCAGCCACCAGCATCCAGAGTTCAAAAT...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAGAGGCCAACAACAGCTaGCAAGAATTATCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNREANNS*QELSAV
Trigger: TACTGCAGATAATTCTTGGCAGCTGTTGTTGGCCTC...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTAATCTGAAATCATCTTaGCTGGGTCATAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGINLKSS*LGHNSK
Trigger: CTTTGAATTATGACCCAGGCAAGATGATTTCAGATT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGACCTGGCTGCTGGCAATaGTTTCAGAGATCATTTTTG +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRPGCWQ*FQRSFL
Trigger: CAAAAATGATCTCTGAAAGCATTGCCAGCAGCCAGG...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTATCTCTGTCCATCATTaGCTCAGAATTAGTCGAGAT +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSISVHH*LRISRD
Trigger: ATCTCGACTAATTCTGAGGCAATGATGGACAGAGAT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTATCTCTGTCCATCATTaGCTCAGAATTAGTCGAGAT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIISVHH*LRISRD
Trigger: ATCTCGACTAATTCTGAGGCAATGATGGACAGAGAT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCAACAGTGGCCAAAGTaGAAAGTATTTCTACTTTCC +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSQQWPK*KVFLLS
Trigger: GGAAAGTAGAAATACTTTGCACTTTGGCCACTGTTG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCAACAGTGGCCAAAGTaGAAAGTATTTCTACTTTCC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIQQWPK*KVFLLS
Trigger: GGAAAGTAGAAATACTTTGCACTTTGGCCACTGTTG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGGTACAAACAAGCTCTaGCACGGTCAGCTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLGTNKL*HGQLLR
Trigger: CCTAAGGAGCTGACCGTGCCAGAGCTTGTTTGTACC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TATGACTCCCAACTTTTGCAAGTCATCCATATTGAAACCAGTTTTTATGTGTTGGGTACAAACAAGCTCTaGCACGGTCAGCTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: YDSQLLQVIHIETSFYVLGTNKL*HGQLLR
Trigger: CCTAAGGAGCTGACCGTGCCAGAGCTTGTTTGTACC...CAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGGCAGATAGGAAAATATaGTTTTTCAACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQADRKI*FFNWCW
Trigger: CCAGCACCAGTTGAAAAACCATATTTTCCTATCTGC...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAAGAACCTTCTTCAGTaGTGGTTTGACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLKNLLQ*WFDILF
Trigger: AAACAGAATGTCAAACCACCACTGAAGAAGGTTCTT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAAAGTCCTCATACACTaGATATTTTTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLKVLIH*IFLEVS
Trigger: GCTGACTTCCAAAAATATCCAGTGTATGAGGACTTT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGATCTCATTCGAGAGTTTaGATGCTGGCAGACCTCAAG +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGSHSRV*MLADLK
Trigger: CTTGAGGTCTGCCAGCATCCAAACTCTCGAATGAGA...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTGAGAGTGGAGGATCATaGTTAAATGTTAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSESGGS*LNVNPA
Trigger: AGCAGGATTAACATTTAACCATGATCCTCCACTCTC...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAGAGAGTGGAGGATCATaGTTAAATGTTAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEESGGS*LNVNPA
Trigger: AGCAGGATTAACATTTAACCATGATCCTCCACTCTC...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTATCTGTAAAATTTCCTaGAAGCTTTTCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSICKIS*KLFRAA
Trigger: GGCTGCTCTGAAAAGCTTCCAGGAAATTTTACAGAT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAATCTGTAAAATTTCCTaGAAGCTTTTCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEICKIS*KLFRAA
Trigger: GGCTGCTCTGAAAAGCTTCCAGGAAATTTTACAGAT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTATCTGTAAAATTTCCTaGAAGCTTTTCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIICKIS*KLFRAA
Trigger: GGCTGCTCTGAAAAGCTTCCAGGAAATTTTACAGAT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAATCAGTAACAATGGGTaGCTCAGAGCTACTATATCT +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEISNNG*LRATIS
Trigger: AGATATAGTAGCTCTGAGCCACCCATTGTTACTGAT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTTGCTTCGGTATAAGATaGAAGAATAAAAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSCFGIR*KNKRGC
Trigger: GCATCCCCTTTTATTCTTCCATCTTATACCGAAGCA...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTGCTTCGGTATAAGATaGAAGAATAAAAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFICFGIR*KNKRGC
Trigger: GCATCCCCTTTTATTCTTCCATCTTATACCGAAGCA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp ACTGTAAATCCTGCTGTTCTGTCGACTGTGTTGGTGAAGAACCTTCTTCAGTGGACACAAATGGCCTTTTaGAGAACATCTAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: TVNPAVLSTVLVKNLLQWTQMAF*RTSKAV
Trigger: TACAGCTTTAGATGTTCTCCAAAAGGCCATTTGTGT...CCACTGAAGAAGGTTCTTCACCAACACAGTCGACAGAACAGCAGGATTTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGACACAAATGGCCTTTTaGAGAACATCTAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLTQMAF*RTSKAV
Trigger: TACAGCTTTAGATGTTCTCCAAAAGGCCATTTGTGT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTATCTGCATGTTTTCTaGTCCTACACAAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIYLHVF*SYTNGL
Trigger: AAGGCCATTTGTGTAGGACCAGAAAACATGCAGATA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCTGGTCAAATATAGCTaGATACATTATCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: QALAVTASDDVRLKTHGILVKYS*IHYLHV
Trigger: AACATGCAGATAATGTATCCAGCTATATTTGACCAG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCGATGTAGTACATCTTaGGACCTCTTTAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSRCSTS*DLFKST
Trigger: AGTGCTTTTAAAGAGGTCCCAAGATGTACTACATCG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGAACTCTGGATGCTGGTaGCTGCATGAAATCCTTAAA +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRNSGCW*LHEILK
Trigger: TTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTT...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTTACTGTAGTGACTCTTaGAGGGTGACAGGAAATATT +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSYCSDS*RVTGNI
Trigger: AATATTTCCTGTCACCCTCCAAGAGTCACTACAGTA...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAATGCCAAACCTAAGTaGAAATCTAAGGAACATACC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLNAKPK*KSKEHT
Trigger: GGTATGTTCCTTAGATTTCCACTTAGGTTTGGCATT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTCAGCTATTTCAAAATaGCAGGGGAACTTTACCTTG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFISAISK*QGNFTL
Trigger: CAAGGTAAAGTTCCCCTGCCATTTTGAAATAGCTGA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CAA 72 bp ATATATGCGGTTTCCTTGACTAGCTGTAATAAGCACTaGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAA +
Preference number: 4 (lower is better)
Translates to: IYAVSLTSCNKH*RALQIASVIQQ
Trigger: TTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATTACAGCTAGTCAAGGAAACCGCATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTACCAAACATAGCTGAGTaGTCTTCGGTTCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVPNIAE*SSVPWF
Trigger: GAACCAAGGAACCGAAGATCACTCAGCTATGTTTGG...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TGCGCCAAGTTAAGTAAAGTCCTCATACACTGGATATTTTTGGAAGTCAGCATTTGTGACATGAGTCTCTaGATAGCAGCCAAACATAGC +
Preference number: 4 (lower is better)
Translates to: CAKLSKVLIHWIFLEVSICDMSL*IAAKHS
Trigger: GCTATGTTTGGCTGCTATTCAGAGACTCATGTCACA...AATGCTGACTTCCAAAAATATCCAGTGTATGAGGACTTTACTTAACTTGGCGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp GTTAATCCTGCTTTAATAAGAGAAGTTAAAGCTTCTGCTCCCCATTCTCTCATTACAGAATCTGTGTATTaGTTCCACCGCAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: VNPALIREVKASAPHSLITESVY*FHRNSS
Trigger: CGAGCTGTTGCGGTGGAATCAATACACAGATTCTGT...AATGAGAGAATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAGCCCTGAACGGAATATaGTTTGTTGGAAAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGALNGI*FVGKCS
Trigger: GCTACACTTTCCAACAAATCATATTCCGTTCAGGGC...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTTTGGTGAGATTCACTTaGTGGACTTATCATCATAAC +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSLVRFT*WTYHHN
Trigger: GTTATGATGATAAGTCCATCAAGTGAATCTCACCAA...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAGCCACAACTTGTTGGTaGGATTCACTTGATGGACTT +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGATTCW*DSLDGL
Trigger: AAGTCCATCAAGTGAATCTCACCAACAAGTTGTGGC...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAGCATTACTGTCCCTTaGGGCTGGACTGCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLSITVP*GWTAKG
Trigger: ACCTTTAGCAGTCCAGCCTCAAGGGACAGTAATGCT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCAGCCTCTGGTTTTGTaGGAGTGGAGGATCATGGTT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLQPLVL*EWRIMV
Trigger: AACCATGATCCTCCACTCTCACAAAACCAGAGGCTG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp ATAAAAGATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTCAGCCTCTGGTTTTGTaGGAGTGGAGGATCATGGTT +
Preference number: 4 (lower is better)
Translates to: IKDPSAFTISRKTLVECCQPLVL*EWRIMV
Trigger: AACCATGATCCTCCACTCTCACAAAACCAGAGGCTG...ACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTAGTCGAATATCTGGATaGTTAATATTGGACATCTCC +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSSRISG*LILDIS
Trigger: GGAGATGTCCAATATTAATCATCCAGATATTCGACT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAGTCGAATATCTGGATaGTTAATATTGGACATCTCC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFISRISG*LILDIS
Trigger: GGAGATGTCCAATATTAATCATCCAGATATTCGACT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTCTCGGCGGTGTCCCTTaGATGATGAATGAGAATATT +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTLGGVP*MMNENI
Trigger: AATATTCTCATTCATCATTCAAGGGACACCGCCGAG...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR TCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGATTTGCTGAGTGCTGCTaGCTGTATATGGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGFAECC*LYMVKK
Trigger: CTTCTTGACCATATACAGTCAGCAGCACTCAGCAAA...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTCTTCATTGTTTTTGCTaGGTGCTGCTGACTGTATAT +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTLHCFC*VLLTVY
Trigger: ATATACAGTCAGCAGCACTCAGCAAAAACAATGAAG...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAGCTGCTGTGTTCACATaGCCTTACTGGTCAGATGTT +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVAAVFT*PYWSDV
Trigger: AACATCTGACCAGTAAGGTCATGTGAACACAGCAGC...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTTTTTTAACATGTTACTaGATCGGTACACTACCCTTG +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSFLTCY*IGTLPL
Trigger: CAAGGGTAGTGTACCGATTCAGTAACATGTTAAAAA...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGTGACTCTTGGAGGGTaGCAGGAAATATTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLVTLGG*QEIFWR
Trigger: CCTCCAGAATATTTCCTGTCACCCTCCAAGAGTCAC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTTGCACAGTTGGGTCTaGAGCCTAATATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFILHSWV*SLIFSF
Trigger: AAAAGAAAATATTAGGCTTCAGACCCAACTGTGCAA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTTTAAACAGAGTAAGTaGTGTGGGGTGTCAATAATG +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIFKQSK*CGVSIM
Trigger: CATTATTGACACCCCACATCACTTACTCTGTTTAAA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGACTGGCCATTCTTGAATaGTGTGTGCCAAATGTGTTT +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRLAILE*CVPNVF
Trigger: AAACACATTTGGCACACATCATTCAAGAATGGCCAG...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGAATTATATTTCCAGCTaGAGTCTCAGACACGACTTC +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRNYISS*SLRHDF
Trigger: GAAGTCGTGTCTGAGACTGCAGCTGGAAATATAATT...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGGAACCTTTGCATATTaGAGTTATAAAGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSGTFAY*SYKGIS
Trigger: AGAGATGCCTTTATAACTGCAATATGCAAAGGTTCC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATTTCCTTGTACCAGTACTGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCACAGCCCCATGGCAATaGGCCAAGTTAAGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: ISLYQYWLFYNISVSFIFTAPWQ*AKLSKV
Trigger: GACTTTACTTAACTTGGCGCATTGCCATGGGGCTGT...GAAGATGAACGACACAGAGATATTATAGAACAACCAGTACTGGTACAAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGTTCAATAAAAGCAACTaGAGCCTCTGGTTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRFNKSN*SLWFCE
Trigger: CTCACAAAACCAGAGGCTGCAGTTGCTTTTATTGAA...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGACTGAAGACACTGGAATaGAGTTCGTATCAAGGATTC +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRLKTLE*SSYQGF
Trigger: GAATCCTTGATACGAACTGCATTCCAGTGTCTTCAG...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTACATCTACAACTATTTaGAGGCAAGTACAAGGCATT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFITSTTI*RQVQGI
Trigger: AATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACAACTCCTTTCTCTTCTaGCTGCTTTTGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNNSFLF*LLLLCC
Trigger: GCAGCACAGCAAAAGCAGGCAGAAGAGAAAGGAGTT...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAAACAGAGTTTGCCCTaGACTCTTCCTGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLKQSLP*TLPDSR
Trigger: CCTGCTGTCAGGAAGAGTGCAGGGCAAACTCTGTTT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCAGCAACCATCCTCTCAAAGTAGAAAACAGAGTTTaGCCTGCACTCTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: WLFYNISVSFIFSNHPLKVENRV*PALFLT
Trigger: TGTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTAC...TTTGAGAGGATGGTTGCTGAAGATGAACGACACAGAGATATTATAGAACAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTGTAATAAAGTTCCATaGGCACCAATTGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLCNKVP*APIVEN
Trigger: GTTTTCTACAATTGGTGCGCATGGAACTTTATTACA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTTCCAGATAACAGTGTaGCAGGTTGAATGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTFQITV*QVECCN
Trigger: ATTACAGCATTCAACCTGGCACACTGTTATCTGGAA...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTAAATCTCCTAAAGGCTaGAGCAAATATCTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSKSPKG*SKYLLV
Trigger: CACTAGAAGATATTTGCTGCAGCCTTTAGGAGATTT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp CTGTCACAACCAACTGAAGACACTGGAATGCAGTTCGTATCAAGGATTCTCCTTAAATCTCCTAAAGGCTaGAGCAAATATCTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: LSQPTEDTGMQFVSRILLKSPKG*SKYLLV
Trigger: CACTAGAAGATATTTGCTGCAGCCTTTAGGAGATTT...AAGGAGAATCCTTGATACGAACTGCATTCCAGTGTCTTCAGTTGGTTGTGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTATTCTTACAAATGGCCTaGTCATGCCTGATATGGGCC +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVFLQMA*SCLIWA
Trigger: GGCCCATATCAGGCATGAGCAGGCCATTTGTAAGAA...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGATGACTCCCAACTTTTaGAAGTCATCCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLMTPNF*KSSILK
Trigger: TTTCAATATGGATGACTTGCAAAAGTTGGGAGTCAT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAACTGAAATAGCACTGTaGAATATGACTCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAETEIAL*NMTPNF
Trigger: AAAGTTGGGAGTCATATTGCACAGTGCTATTTCAGT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTACTGAAATAGCACTGTaGAATATGACTCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFITEIAL*NMTPNF
Trigger: AAAGTTGGGAGTCATATTGCACAGTGCTATTTCAGT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCAGCAACCATCCTCTCAAACTGCTAGTTTCCATGTaGTTTCAGAAGGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: WLFYNISVSFIFSNHPLKLLVSM*FQKGRN
Trigger: ATTCCTGCCCTTCTGAAAGCACATGGAAACTAGCAG...TTTGAGAGGATGGTTGCTGAAGATGAACGACACAGAGATATTATAGAACAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTCTGGATGCTGGTGGCTaGATGAAATCCTTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTLDAGG*MKSLKG
Trigger: TCCTTTTAAGGATTTCATGCAGCCACCAGCATCCAG...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR GCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCTGCCAAGAATTATCTaGAGTAAGAAATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSLPRII*SKKCPS
Trigger: AGAAGGACATTTCTTACTGCAGATAATTCTTGGCAG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCTGCCAAGAATTATCTaGAGTAAGAAATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFILPRII*SKKCPS
Trigger: AGAAGGACATTTCTTACTGCAGATAATTCTTGGCAG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAGAGGCCAACAACAGCTaGCAAGAATTATCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGEANNS*QELSAV
Trigger: TACTGCAGATAATTCTTGGCAGCTGTTGTTGGCCTC...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTCTGAAGCAGGAAACTaGTTGAACCCGGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLSEAGN*LNPGSR
Trigger: TCTGCTTCCCGGGTTCAAGCAGTTTCCTGCTTCAGA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAAGCAGATAGGAAAATATaGTTTTTCAACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TVCQVECCNKVPCAPIVEADRKI*FFNWCW
Trigger: CCAGCACCAGTTGAAAAACCATATTTTCCTATCTGC...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACAGGTCTAGCAAACAATaGAATGCCACAGACATGGCG +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNRSSKQ*NATDMA
Trigger: CGCCATGTCTGTGGCATTCCATTGTTTGCTAGACCT...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTACACTGGATATTTTTaGAAGTCAGCATTACTGTCC +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSYTGYF*KSALLS
Trigger: GGACAGTAATGCTGACTTCCAAAAATATCCAGTGTA...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAAAAGTCCTCATACACTaGATATTTTTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEKVLIH*IFLEVS
Trigger: GCTGACTTCCAAAAATATCCAGTGTATGAGGACTTT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCCAAGAACAGCCCCATaGCAATGCGCCAAGTTAAGT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLPRTAP*QCAKLS
Trigger: ACTTAACTTGGCGCATTGCCATGGGGCTGTTCTTGG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCGAGAGTTTGGATGCTaGCAGACCTCAAGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLREFGC*QTSSRW
Trigger: CCATCTACTTGAGGTCTGCCAGCATCCAAACTCTCG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000546600.5
CDS-3UTR CCA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAAGAGAGTGGAGGATCATaGTTAAATGTTAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: TVCQVECCNKVPCAPIVEESGGS*LNVNPA
Trigger: AGCAGGATTAACATTTAACCATGATCCTCCACTCTC...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAAATGGCGGTGCAGGGTaGAATGGCCGATTTAAAACA +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVNGGAG*NGRFKT
Trigger: TGTTTTAAATCGGCCATTCCACCCTGCACCGCCATT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp GATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTTTCATAAATGGCGGTGCAGGGTaGAATGGCCGATTTAAAACA +
Preference number: 4 (lower is better)
Translates to: DPSAFTISRKTLVECCFINGGAG*NGRFKT
Trigger: TGTTTTAAATCGGCCATTCCACCCTGCACCGCCATT...TATGAAACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGCTGTAAGAAAAGGCTaGCTAGGAATAAAAGTTAGT +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSAVRKG*LGIKVS
Trigger: ACTAACTTTTATTCCTAGCCAGCCTTTTCTTACAGC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGCTGTAAGAAAAGGCTaGCTAGGAATAAAAGTTAGT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIAVRKG*LGIKVS
Trigger: ACTAACTTTTATTCCTAGCCAGCCTTTTCTTACAGC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGTGCTTCGGTATAAGATaGAAGAATAAAAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRCFGIR*KNKRGC
Trigger: GCATCCCCTTTTATTCTTCCATCTTATACCGAAGCA...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp AGACTCAATCTTTTCTTTGTCTGCAGTGGTAGAGGACTCTCGAACTCTGTCCAGCTGGTCAAATATAGCTaGATACATTATCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: RLNLFFVCSGRGLSNSVQLVKYS*IHYLHV
Trigger: AACATGCAGATAATGTATCCAGCTATATTTGACCAG...CTGGACAGAGTTCGAGAGTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTACAAATGCCAACAACTaGTCAAATATAGCTGGATAC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFITNANN*SNIAGY
Trigger: GTATCCAGCTATATTTGACCAGTTGTTGGCATTTGT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGACAGCTGTCCATACTGTaGAGGTTTACAGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRQLSIL*RFTGKF
Trigger: GAATTTTCCTGTAAACCTCCACAGTATGGACAGCTG...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAATCTTCAAAAGTATTaGCTAGTTCTGGCCACATAC +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFINLQKY*LVLATY
Trigger: GTATGTGGCCAGAACTAGCCAATACTTTTGAAGATT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTCGATGTAGTACATCTTaGGACCTCTTTAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTRCSTS*DLFKST
Trigger: AGTGCTTTTAAAGAGGTCCCAAGATGTACTACATCG...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTAGTTCTTCTAGTCACTaGAGAACCCAATTCATACTA +
Preference number: 4 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSSSSSH*RTQFIL
Trigger: TAGTATGAATTGGGTTCTCCAGTGACTAGAAGAACT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCCAAACATAGCTGAGTaGTCTTCGGTTCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLPNIAE*SSVPWF
Trigger: GAACCAAGGAACCGAAGATCACTCAGCTATGTTTGG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAATCAGCATTAACCAACTaGCAAAGATCCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEESALTN*QRSWKS
Trigger: GCTTTTCCAGGATCTTTGTCAGTTGGTTAATGCTGA...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TGCGCCAAGTTAAGTAAAGTCCTCATACACTGGATATTTTTGGAAGTCAGCATTTCAGCATTAACCAACTaGCAAAGATCCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: CAKLSKVLIHWIFLEVSISALTN*QRSWKS
Trigger: GCTTTTCCAGGATCTTTGTCAGTTGGTTAATGCTGA...AATGCTGACTTCCAAAAATATCCAGTGTATGAGGACTTTACTTAACTTGGCGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAGCTTTAGCACTGCCTTaGACTGTGATTGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGALALP*TVIVRI
Trigger: TATTCTGACAATCACAGTTCAAGGCAGTGCTAAAGC...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAATCTTCAGTGGTGGTTTaGCATTCTGTTTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEESSVVV*HSVSSS
Trigger: AGAGCTTGAAACAGAATGTCAAACCACCACTGAAGA...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp ATAAAAGATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTTGTCGACTGTGTTGGTaGAGAACCTTCTTCAGTGGT +
Preference number: 4 (lower is better)
Translates to: IKDPSAFTISRKTLVECCCRLCW*RTFFSG
Trigger: ACCACTGAAGAAGGTTCTTCACCAACACAGTCGACA...ACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACGCCCTGAACGGAATATaGTTTGTTGGAAAGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNALNGI*FVGKCS
Trigger: GCTACACTTTCCAACAAATCATATTCCGTTCAGGGC...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAATAACACTTTGGCCCTaGACGGAATATGATTTGTTG +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRITLWP*TEYDLL
Trigger: CAACAAATCATATTCCGTTCAGGGCCAAAGTGTTAT...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAAATCAAGGATTCTCCTTaGTCATTTCTGATTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEIKDSP*SFLIAP
Trigger: GGGAGCAATCAGAAATGATCAAGGAGAATCCTTGAT...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TTGGAAGAGGGCATTTACCACTTAATCTTTCATCCTCTATATAGCGATGTAGTATCTGTCACAACCAACTaGAGACACTGGAATGCAGTT +
Preference number: 4 (lower is better)
Translates to: LEEGIYHLIFHPLYSDVVSVTTN*RHWNAV
Trigger: AACTGCATTCCAGTGTCTTCAGTTGGTTGTGACAGA...TACTACATCGCTATATAGAGGATGAAAGATTAAGTGGTAAATGCCCTCTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTACTCGGCGGTGTCCCTTaGATGATGAATGAGAATATT +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVLGGVP*MMNENI
Trigger: AATATTCTCATTCATCATTCAAGGGACACCGCCGAG...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGTCATTGCTGATAAGTTaGACTACCTCGACATCAATA +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRSLLIS*TTSTSI
Trigger: TATTGATGTCGAGGTAGTTCAACTTATCAGCAATGA...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCCTACAGCAGTCTCTTaGAAACTTGGTTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLPTAVS*KLGCPS
Trigger: AGATGGGCAACCAAGTTTTCAAGAGACTGCTGTAGG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp CATAGGACTGACAAAATGACCTTAATAGTTGAGGCTGCACACAGAATCTGTGTAAACTTTTATTATTCCTaGTTCAGCAGCAACGTGTGC +
Preference number: 4 (lower is better)
Translates to: HRTDKMTLIVEAAHRICVNFYYS*FSSNVC
Trigger: GCACACGTTGCTGCTGAATCAGGAATAATAAAAGTT...TACACAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATTTTGTCAGTCCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCTGGAAAAGCATATATaGATCTTTAGCACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFILEKHI*IFSTRF
Trigger: AAACCTTGTGCTAAAGATGCATATATGCTTTTCCAG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGTGTTGTAAAAAGACCTaGGGAAAATCATTGAGGACT +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRCCKKT*GKSLRT
Trigger: AGTCCTCAATGATTTTCCGCAGGTCTTTTTACAACA...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAAGTTGACTGTAAATCCTaGTGTTCTGTCGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEVDCKS*CSVDCV
Trigger: AACACAGTCGACAGAACAGCAGGATTTACAGTCAAC...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTGTTGCCAAGACAAGTTaGCATGATGTTCCAAGAACA +
Preference number: 4 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSVAKTS*HDVPRT
Trigger: TGTTCTTGGAACATCATGGCAACTTGTCTTGGCAAC...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAATTCGAGAGTTTGGATaGTGGCAGACCTCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVIREFG*WQTSSR
Trigger: TCTACTTGAGGTCTGCCAGCATCCAAACTCTCGAAT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCTTCAATAAAAGCAACTaGAGCCTCTGGTTTTGTGAG +
Preference number: 4 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCFNKSN*SLWFCE
Trigger: CTCACAAAACCAGAGGCTGCAGTTGCTTTTATTGAA...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAAACACGCATTCTAACTaGTTGAGTCGAATATCTGGA +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRNTHSN*LSRISG
Trigger: TCCAGATATTCGACTCAAGCAGTTAGAATGCGTGTT...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAACTCCTTTCTCTTCTaGCTGCTTTTGCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLNSFLF*LLLLCC
Trigger: GCAGCACAGCAAAAGCAGGCAGAAGAGAAAGGAGTT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAGTAGAAAACAGAGTTTaGCCTGCACTCTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVVENRV*PALFLT
Trigger: TGTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTAC...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAGTGTGCCAGGTTGAATaGTGTAATAAAGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGVCQVE*CNKVPC
Trigger: GCATGGAACTTTATTACAGCATTCAACCTGGCACAC...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAATGACTCCCAACTTTTaGAAGTCATCCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEMTPNF*KSSILK
Trigger: TTTCAATATGGATGACTTGCAAAAGTTGGGAGTCAT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAGCTGGATACATTATCTaGATGTTTTCTGGTCCTACA +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRAGYII*MFSGPT
Trigger: TGTAGGACCAGAAAACATGCAGATAATGTATCCAGC...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGATTTCTCATTCACCACTaGTTTGTGACACGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRFLIHH*FVTRCF
Trigger: AAAACAGCGTGTCACAAAGCAGTGGTGAATGAGAAA...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACCTGCTAGTTTCCATGTaGTTTCAGAAGGGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNLLVSM*FQKGRN
Trigger: ATTCCTGCCCTTCTGAAAGCACATGGAAACTAGCAG...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTATTTTGAACTCTGGATaGTGGTGGCTGCATGAAATC +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTILNSG*WWLHEI
Trigger: GATTTCATGCAGCCACCAGCATCCAGAGTTCAAAAT...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR GCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTAATCTGAAATCATCTTaGCTGGGTCATAATTCAAAG +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSNLKSS*LGHNSK
Trigger: CTTTGAATTATGACCCAGGCAAGATGATTTCAGATT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCACTGCACTTCTAAATaGTTGACTATCTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIHCTSK*LTISKN
Trigger: ATTTTTGGAGATAGTCAAGCATTTAGAAGTGCAGTG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTCCTTGTACCAGTACTaGTTGTTCTATAATATCTCT +
Preference number: 4 (lower is better)
Translates to: NKHLRALQIASVIQQGHSSLYQY*LFYNIS
Trigger: AGAGATATTATAGAACAACCAGTACTGGTACAAGGA...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAGCAGATAGGAAAATATaGTTTTTCAACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRADRKI*FFNWCW
Trigger: CCAGCACCAGTTGAAAAACCATATTTTCCTATCTGC...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCAGCTTCATCTGTGCTaGCATCAAGAAGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLQLHLC*HQEGVR
Trigger: TCTCACTCCTTCTTGATGCCAGCACAGATGAAGCTG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGTACACTGGATATTTTTaGAAGTCAGCATTACTGTCC +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRYTGYF*KSALLS
Trigger: GGACAGTAATGCTGACTTCCAAAAATATCCAGTGTA...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAATACACTGGATATTTTTaGAAGTCAGCATTACTGTCC +
Preference number: 4 (lower is better)
Translates to: TVCQVECCNKVPCAPIVEYTGYF*KSALLS
Trigger: GGACAGTAATGCTGACTTCCAAAAATATCCAGTGTA...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTCTCATTCGAGAGTTTaGATGCTGGCAGACCTCAAG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLSHSRV*MLADLK
Trigger: CTTGAGGTCTGCCAGCATCCAAACTCTCGAATGAGA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000546600.5
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAATGGCGGTGCAGGGTaGAATGGCCGATTTAAAACA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLNGGAG*NGRFKT
Trigger: TGTTTTAAATCGGCCATTCCACCCTGCACCGCCATT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp CTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTGTCACAACCAACTATCAGTAACAATGGGTaGCTCAGAGCTACTATATCT +
Preference number: 4 (lower is better)
Translates to: LFAGKYKALLVENLSQPTISNNG*LRATIS
Trigger: AGATATAGTAGCTCTGAGCCACCCATTGTTACTGAT...AGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTGCTGTAAGAAAAGGCTaGCTAGGAATAAAAGTTAGT +
Preference number: 4 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTAVRKG*LGIKVS
Trigger: ACTAACTTTTATTCCTAGCCAGCCTTTTCTTACAGC...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp TGCGCCAAGTTAAGTAAAGTCCTCATACACTGGATATTTTTGGAAGTCAGCATTCAGCTGTCCATACTGTaGAGGTTTACAGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: CAKLSKVLIHWIFLEVSIQLSIL*RFTGKF
Trigger: GAATTTTCCTGTAAACCTCCACAGTATGGACAGCTG...AATGCTGACTTCCAAAAATATCCAGTGTATGAGGACTTTACTTAACTTGGCGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAAAACTCTGGATGCTGGTaGCTGCATGAAATCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEENSGCW*LHEILK
Trigger: TTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTT...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAGTAAGTGTTCTGCCTTaGCTAGACAGACTTCACCTA +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVVSVLP*LDRLHL
Trigger: TAGGTGAAGTCTGTCTAGCCAAGGCAGAACACTTAC...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAGCAAAAACGCAACAGTaGCCAAAGTGCAAAGTATTT +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRAKTQQ*PKCKVF
Trigger: AAATACTTTGCACTTTGGCCACTGTTGCGTTTTTGC...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAGGGGAACTTTACCTTaGCAAAAACGCAACAGTGGC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLRGTLP*QKRNSG
Trigger: GCCACTGTTGCGTTTTTGCCAAGGTAAAGTTCCCCT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGATCAGCTATTTCAAAATaGCAGGGGAACTTTACCTTG +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRSAISK*QGNFTL
Trigger: CAAGGTAAAGTTCCCCTGCCATTTTGAAATAGCTGA...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR CAA 72 bp TGCCATAAAATGATCTTATCTTTGAGAGCTTCCTTTTaGAATCTCCTGGCATCGAATACTTTCACACACCCC +
Preference number: 4 (lower is better)
Translates to: CHKMILSLRASF*NLLASNTFTHP
Trigger: GGGGTGTGTGAAAGTATTCGATGCCAGGAGATTCAAAAAGGAAGCTCTCAAAGATAAGATCATTTTATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CAA 72 bp CATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTaGGTAGAAAATCTGTCACAACCAACTGAAGACACT +
Preference number: 4 (lower is better)
Translates to: HLQLFAGKYKAL*VENLSQPTEDT
Trigger: AGTGTCTTCAGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 72 bp AAATCTCCTAAAGGCTGCAGCAAATATCTTCTAGTGTaGAAGATCCTTGCTACTCCAGCCAATGTTAATACC +
Preference number: 4 (lower is better)
Translates to: KSPKGCSKYLLV*KILATPANVNT
Trigger: GGTATTAACATTGGCTGGAGTAGCAAGGATCTTCAACACTAGAAGATATTTGCTGCAGCCTTTAGGAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGATTCAGCAGCCTCTTTaGCAGGTGGGAATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLIQQPL*QVGISS
Trigger: AGAAGAAATTCCCACCTGTCAAAGAGGCTGCTGAAT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTGAAAGTGCCTCATCATaGACTACTGTATTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTESASS*TTVLVV
Trigger: AACAACCAATACAGTAGTTCATGATGAGGCACTTTC...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAGCTTTAGCACTGCCTTaGACTGTGATTGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVALALP*TVIVRI
Trigger: TATTCTGACAATCACAGTTCAAGGCAGTGCTAAAGC...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACGCTTTAGCACTGCCTTaGACTGTGATTGTCAGAATA +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNALALP*TVIVRI
Trigger: TATTCTGACAATCACAGTTCAAGGCAGTGCTAAAGC...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTATCTTCAGTGGTGGTTTaGCATTCTGTTTCAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVSSVVV*HSVSSS
Trigger: AGAGCTTGAAACAGAATGTCAAACCACCACTGAAGA...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGCCACAACTTGTTGGTaGGATTCACTTGATGGACTT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLATTCW*DSLDGL
Trigger: AAGTCCATCAAGTGAATCTCACCAACAAGTTGTGGC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp ATAAAAGATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTGCCACAACTTGTTGGTaGGATTCACTTGATGGACTT +
Preference number: 4 (lower is better)
Translates to: IKDPSAFTISRKTLVECCATTCW*DSLDGL
Trigger: AAGTCCATCAAGTGAATCTCACCAACAAGTTGTGGC...ACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTCTGTCACAACCAACTaGAGACACTGGAATGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLSVTTN*RHWNAV
Trigger: AACTGCATTCCAGTGTCTTCAGTTGGTTGTGACAGA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTGTAAATGAAGATGACTaGGAATGTATTGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSVNEDD*ECIEPL
Trigger: CAAGGGCTCAATACATTCTCAGTCATCTTCATTTAC...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTCTGAAGAAGAACAGGTaGTGCATTCTACTAAAGTTG +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTLKKNR*CILLKL
Trigger: CAACTTTAGTAGAATGCATCACCTGTTCTTCTTCAG...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGACAGACAGACTTCAGTaGAAGCTTGGAGAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLTDRLQ*KLGELF
Trigger: AAACAGCTCTCCAAGCTTTCACTGAAGTCTGTCTGT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAGCTACTTGGAAGTCTaGAGCAGGAAACTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLSYLEV*SRKLLE
Trigger: TTCAAGCAGTTTCCTGCTTCAGACTTCCAAGTAGCT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTACAGCTCCACTTCTTATaGACAAGGAATAGGCACAAT +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVQLHFL*TRNRHN
Trigger: ATTGTGCCTATTCCTTGTTCATAAGAAGTGGAGCTG...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTAATTATATTTCCAGCTaGAGTCTCAGACACGACTTC +
Preference number: 4 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSNYISS*SLRHDF
Trigger: GAAGTCGTGTCTGAGACTGCAGCTGGAAATATAATT...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTGATTGCCTTAGAAAGTaGCTCATCATGAACTACTGT +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTDCLRK*LIMNYC
Trigger: ACAGTAGTTCATGATGAGGCACTTTCTAAGGCAATC...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR GCA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGCTGGAAAAGCATATATaGATCTTTAGCACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: RFSILNSGCWWLHEILKRLEKHI*IFSTRF
Trigger: AAACCTTGTGCTAAAGATGCATATATGCTTTTCCAG...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAACTGGAAAAGCATATATaGATCTTTAGCACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: TVCQVECCNKVPCAPIVELEKHI*IFSTRF
Trigger: AAACCTTGTGCTAAAGATGCATATATGCTTTTCCAG...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGATGTTGTAAAAAGACCTaGGGAAAATCATTGAGGACT +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRCCKKT*GKSLRT
Trigger: AGTCCTCAATGATTTTCCGCAGGTCTTTTTACAACA...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCACATCTACAACTATTTaGAGGCAAGTACAAGGCATT +
Preference number: 4 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCTSTTI*RQVQGI
Trigger: AATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGT...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACGAGGCCAAAGCTACCTaGAACATCTACAACTATTTG +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNEAKAT*NIYNYL
Trigger: CAAATAGTTGTAGATGTTGCAGGTAGCTTTGGCCTC...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp CAACAGCAAAAAGAGATGGTTCCTTATTATTTCCATAGGCCATATCCATTGCTTGAGGCCAAAGCTACCTaGAACATCTACAACTATTTG +
Preference number: 4 (lower is better)
Translates to: QQQKEMVPYYFHRPYPLLEAKAT*NIYNYL
Trigger: CAAATAGTTGTAGATGTTGCAGGTAGCTTTGGCCTC...AAGCAATGGATATGGCCTATGGAAATAATAAGGAACCATCTCTTTTTGCTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGTAGAAAACAGAGTTTaGCCTGCACTCTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLVENRV*PALFLT
Trigger: TGTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTAC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TTGGAAGAGGGCATTTACCACTTAATCTTTCATCCTCTATATAGCGATGTAGTAGTGTGCCAGGTTGAATaGTGTAATAAAGTTCCATGC +
Preference number: 4 (lower is better)
Translates to: LEEGIYHLIFHPLYSDVVVCQVE*CNKVPC
Trigger: GCATGGAACTTTATTACAGCATTCAACCTGGCACAC...TACTACATCGCTATATAGAGGATGAAAGATTAAGTGGTAAATGCCCTCTTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TGCGCCAAGTTAAGTAAAGTCCTCATACACTGGATATTTTTGGAAGTCAGCATTTTCCAGATAACAGTGTaGCAGGTTGAATGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: CAKLSKVLIHWIFLEVSIFQITV*QVECCN
Trigger: ATTACAGCATTCAACCTGGCACACTGTTATCTGGAA...AATGCTGACTTCCAAAAATATCCAGTGTATGAGGACTTTACTTAACTTGGCGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCTGGATGCTGGTGGCTaGATGAAATCCTTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLLDAGG*MKSLKG
Trigger: TCCTTTTAAGGATTTCATGCAGCCACCAGCATCCAG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TATGACTCCCAACTTTTGCAAGTCATCCATATTGAAACCAGTTTTTATGTGTTGCTGGATGCTGGTGGCTaGATGAAATCCTTAAAAGGA +
Preference number: 4 (lower is better)
Translates to: YDSQLLQVIHIETSFYVLLDAGG*MKSLKG
Trigger: TCCTTTTAAGGATTTCATGCAGCCACCAGCATCCAG...CAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGACACCATATGGTAGCTaGCTTAAGAGACAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLTPYGS*LKRQEL
Trigger: CAACTCCTGTCTCTTAAGGCAGCTACCATATGGTGT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACACCTTCAGGTATAGTTaGAGGCTCAACTTTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNTFRYS*RLNFVQ
Trigger: TTGGACAAAGTTGAGCCTCCAACTATACCTGAAGGT...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp TTGGAAGAGGGCATTTACCACTTAATCTTTCATCCTCTATATAGCGATGTAGTAGCTGCTGACTGTATATaGTCAAGAAGAACATCCCAA +
Preference number: 4 (lower is better)
Translates to: LEEGIYHLIFHPLYSDVVAADCI*SRRTSQ
Trigger: TTGGGATGTTCTTCTTGACCATATACAGTCAGCAGC...TACTACATCGCTATATAGAGGATGAAAGATTAAGTGGTAAATGCCCTCTTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTATCTGTAAAATTTCCTaGAAGCTTTTCAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSICKIS*KLFRAA
Trigger: GGCTGCTCTGAAAAGCTTCCAGGAAATTTTACAGAT...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAATGCTTCGGTATAAGATaGAAGAATAAAAGGGGATGC +
Preference number: 4 (lower is better)
Translates to: SLKGTSASLSAEQTSEEECFGIR*KNKRGC
Trigger: GCATCCCCTTTTATTCTTCCATCTTATACCGAAGCA...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTTATCTGCATGTTTTCTaGTCCTACACAAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSYLHVF*SYTNGL
Trigger: AAGGCCATTTGTGTAGGACCAGAAAACATGCAGATA...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp CATAGGACTGACAAAATGACCTTAATAGTTGAGGCTGCACACAGAATCTGTGTAAATCTTCAAAAGTATTaGCTAGTTCTGGCCACATAC +
Preference number: 4 (lower is better)
Translates to: HRTDKMTLIVEAAHRICVNLQKY*LVLATY
Trigger: GTATGTGGCCAGAACTAGCCAATACTTTTGAAGATT...TACACAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATTTTGTCAGTCCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTATGTTACTTGTTGCCTTaGAAGAGGGCATTTACCACT +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVCYLLP*KRAFTT
Trigger: AGTGGTAAATGCCCTCTTCCAAGGCAACAAGTAACA...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTGTTACTTGTTGCCTTaGAAGAGGGCATTTACCACT +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNCYLLP*KRAFTT
Trigger: AGTGGTAAATGCCCTCTTCCAAGGCAACAAGTAACA...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTTGAACTCTGGATGCTaGTGGCTGCATGAAATCCTT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLLNSGC*WLHEIL
Trigger: AAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TATGACTCCCAACTTTTGCAAGTCATCCATATTGAAACCAGTTTTTATGTGTTGTTGAACTCTGGATGCTaGTGGCTGCATGAAATCCTT +
Preference number: 4 (lower is better)
Translates to: YDSQLLQVIHIETSFYVLLNSGC*WLHEIL
Trigger: AAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAA...CAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGTAATCCCAGCTACTTaGAAGTCTGAAGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLVIPAT*KSEAGN
Trigger: GTTTCCTGCTTCAGACTTCCAAGTAGCTGGGATTAC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CAA 72 bp TTCAGCAACCATCCTCTCAAAAACAACAGTAACAACTaGTCGCACTGTAGCAGCAGCTGTATTATTTGTAAT +
Preference number: 4 (lower is better)
Translates to: FSNHPLKNNSNN*SHCSSSCIICN
Trigger: ATTACAAATAATACAGCTGCTGCTACAGTGCGACAAGTTGTTACTGTTGTTTTTGAGAGGATGGTTGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTCAGCATTAACCAACTaGCAAAGATCCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLSALTN*QRSWKS
Trigger: GCTTTTCCAGGATCTTTGTCAGTTGGTTAATGCTGA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp ATAAAAGATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTCCTGCGGAAAATCATTaGGGACTGACTCAAGTAATT +
Preference number: 4 (lower is better)
Translates to: IKDPSAFTISRKTLVECCPAENH*GLTQVI
Trigger: AATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGG...ACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAATGACCTTAATAGTTaGGGCTGCACACAGAATCTG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLNDLNS*GCTQNL
Trigger: CAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTTTGGTGAGATTCACTTaGTGGACTTATCATCATAAC +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTLVRFT*WTYHHN
Trigger: GTTATGATGATAAGTCCATCAAGTGAATCTCACCAA...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR TCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAATGAAGCTAACTGCATaGTCATATGGTGAGCTTATC +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVMKLTA*SYGELI
Trigger: GATAAGCTCACCATATGATCATGCAGTTAGCTTCAT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGACTTGGTTGCCCATCTaGATTATTCTGTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLTWLPI*IILYLG
Trigger: CCCCAAATACAGAATAATTCAGATGGGCAACCAAGT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp ATTTCCTTGTACCAGTACTGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCGCTGTTCTCTTTCAGTaGTGCCAAAATTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: ISLYQYWLFYNISVSFIFAVLFQ*CQNFSV
Trigger: AACACTGAAATTTTGGCAGCACTGAAAGAGAACAGC...GAAGATGAACGACACAGAGATATTATAGAACAACCAGTACTGGTACAAGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGATGTTGTAAAAAGACCTaGGGAAAATCATTGAGGACT +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGCCKKT*GKSLRT
Trigger: AGTCCTCAATGATTTTCCGCAGGTCTTTTTACAACA...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCCACTGTGGTTTATCTaGATCCAGAAATTTCACCAG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLPLWFI*IQKFHQ
Trigger: CTGGTGAAATTTCTGGATGCAGATAAACCACAGTGG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTGGAACCTTTGCATATTaGAGTTATAAAGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTGTFAY*SYKGIS
Trigger: AGAGATGCCTTTATAACTGCAATATGCAAAGGTTCC...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGTTGCCAAGACAAGTTaGCATGATGTTCCAAGAACA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLVAKTS*HDVPRT
Trigger: TGTTCTTGGAACATCATGGCAACTTGTCTTGGCAAC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp ATAAAAGATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTCTGAAGACACTGGAATaGAGTTCGTATCAAGGATTC +
Preference number: 4 (lower is better)
Translates to: IKDPSAFTISRKTLVECCLKTLE*SSYQGF
Trigger: GAATCCTTGATACGAACTGCATTCCAGTGTCTTCAG...ACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCTGAAGACACTGGAATaGAGTTCGTATCAAGGATTC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLLKTLE*SSYQGF
Trigger: GAATCCTTGATACGAACTGCATTCCAGTGTCTTCAG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTTTCTCATTCACCACTaGTTTGTGACACGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNFLIHH*FVTRCF
Trigger: AAAACAGCGTGTCACAAAGCAGTGGTGAATGAGAAA...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp ATTTCCTTGTACCAGTACTGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCTTTCTCATTCACCACTaGTTTGTGACACGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: ISLYQYWLFYNISVSFIFFLIHH*FVTRCF
Trigger: AAAACAGCGTGTCACAAAGCAGTGGTGAATGAGAAA...GAAGATGAACGACACAGAGATATTATAGAACAACCAGTACTGGTACAAGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGATTTTGAACTCTGGATaGTGGTGGCTGCATGAAATC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLILNSG*WWLHEI
Trigger: GATTTCATGCAGCCACCAGCATCCAGAGTTCAAAAT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGACTGCCAAGAATTATCTaGAGTAAGAAATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGLPRII*SKKCPS
Trigger: AGAAGGACATTTCTTACTGCAGATAATTCTTGGCAG...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACATTAAAGCCTTACACTaGTGTTCATTCAGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNIKALH*CSFRSL
Trigger: AAGGCTCCTGAATGAACAGCAGTGTAAGGCTTTAAT...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR GCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGACACTGCACTTCTAAATaGTTGACTATCTCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRHCTSK*LTISKN
Trigger: ATTTTTGGAGATAGTCAAGCATTTAGAAGTGCAGTG...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGGGCAATGTGTTCCATaGCAGCAATCAATTACTGTA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLGQCVP*QQSITV
Trigger: TACAGTAATTGATTGCTGGCATGGAACACATTGCCC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGACCTTCAGGTATAGTTaGAGGCTCAACTTTGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLTFRYS*RLNFVQ
Trigger: TTGGACAAAGTTGAGCCTCCAACTATACCTGAAGGT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAAAAGTCCTCATACACTaGATATTTTTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGKVLIH*IFLEVS
Trigger: GCTGACTTCCAAAAATATCCAGTGTATGAGGACTTT...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGACAGTTTCTAACAATTTaGCAACAGCAAAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRQFLTI*QQQKEM
Trigger: CATCTCTTTTTGCTGTTGCCAAATTGTTAGAAACTG...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAATCAGTAACAATGGGTaGCTCAGAGCTACTATATCT +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVISNNG*LRATIS
Trigger: AGATATAGTAGCTCTGAGCCACCCATTGTTACTGAT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTATCTGCATGTTTTCTaGTCCTACACAAATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNYLHVF*SYTNGL
Trigger: AAGGCCATTTGTGTAGGACCAGAAAACATGCAGATA...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTACAAATGCCAACAACTaGTCAAATATAGCTGGATAC +
Preference number: 4 (lower is better)
Translates to: STKVGYKAITCAQVFPSTTNANN*SNIAGY
Trigger: GTATCCAGCTATATTTGACCAGTTGTTGGCATTTGT...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR CCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAAATCTTCAAAAGTATTaGCTAGTTCTGGCCACATAC +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGNLQKY*LVLATY
Trigger: GTATGTGGCCAGAACTAGCCAATACTTTTGAAGATT...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp ATAAAAGATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTTGTTACTTGTTGCCTTaGAAGAGGGCATTTACCACT +
Preference number: 4 (lower is better)
Translates to: IKDPSAFTISRKTLVECCCYLLP*KRAFTT
Trigger: AGTGGTAAATGCCCTCTTCCAAGGCAACAAGTAACA...ACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTCGGTACACTACCCTTaGGTTATTCTGTTTCAATGC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLSVHYP*VILFQC
Trigger: GCATTGAAACAGAATAACCCAAGGGTAGTGTACCGA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CAA 72 bp ATTTCAAAGCTCCAAAATCAGCAAATCATAAACTATTaGCTGCTGTGTTCACATGACCTTACTGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: ISKLQNQQIINY*LLCSHDLTGQM
Trigger: CATCTGACCAGTAAGGTCATGTGAACACAGCAGCAAATAGTTTATGATTTGCTGATTTTGGAGCTTTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CAA 72 bp GACTTTATTAATCATACAATTGGTGGCATATGTCTGTaGTCCAGCAATATGAATAAAACAGGCACTGGCAGT +
Preference number: 4 (lower is better)
Translates to: DFINHTIGGICL*SSNMNKTGTGS
Trigger: ACTGCCAGTGCCTGTTTTATTCATATTGCTGGACAACAGACATATGCCACCAATTGTATGATTAATAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
3UTR CAA 72 bp TCTTGTATCCAGTATTATTTTATATATGCGGTTTCCTaGACTAGCTGTAATAAGCACTTGAGAGCGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SCIQYYFIYAVS*TSCNKHLRALQ
Trigger: TTGGAGCGCTCTCAAGTGCTTATTACAGCTAGTCAAGGAAACCGCATATATAAAATAATACTGGATACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
3UTR CAA 72 bp AGATCTTCTGTTACTATTTCCTTGTACCAGTACTGGTaGTTCTATAATATCTCTGTGTCGTTCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RSSVTISLYQYW*FYNISVSFIFS
Trigger: GCTGAAGATGAACGACACAGAGATATTATAGAACAACCAGTACTGGTACAAGGAAATAGTAACAGAAGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
3UTR CAA 72 bp TTTGAGGGTACTGACAGATCTTCTGTTACTATTTCCTaGTACCAGTACTGGTTGTTCTATAATATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FEGTDRSSVTIS*YQYWLFYNISV
Trigger: CACAGAGATATTATAGAACAACCAGTACTGGTACAAGGAAATAGTAACAGAAGATCTGTCAGTACCCTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCTTCAATCATACTTGTaGTTCCACGAACAAGGTCTA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLLQSYL*FHEQGL
Trigger: TAGACCTTGTTCGTGGAATCACAAGTATGATTGAAG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGATAACACTTTGGCCCTaGACGGAATATGATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLITLWP*TEYDLL
Trigger: CAACAAATCATATTCCGTTCAGGGCCAAAGTGTTAT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCATTGCTGATAAGTTaGACTACCTCGACATCAATA +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNSLLIS*TTSTSI
Trigger: TATTGATGTCGAGGTAGTTCAACTTATCAGCAATGA...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGATGAAGCTAACTGCATaGTCATATGGTGAGCTTATC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLMKLTA*SYGELI
Trigger: GATAAGCTCACCATATGATCATGCAGTTAGCTTCAT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAATGAAGCACTGATATaGACAAAACCTCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLNEALI*TKPHRQ
Trigger: TTGCCTGTGAGGTTTTGTTCATATCAGTGCTTCATT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGACTATGTTTATGTTTTaGACTGTAGGGCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLTMFMF*TVGHGP
Trigger: AGGACCATGCCCTACAGTTCAAAACATAAACATAGT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGATAAGGAAACCGCTTTaGAAAGTCAACATGCCTAGA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLIRKPL*KVNMPR
Trigger: TCTAGGCATGTTGACTTTTCAAAGCGGTTTCCTTAT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGCTGTTCTCTTTCAGTaGTGCCAAAATTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLAVLFQ*CQNFSV
Trigger: AACACTGAAATTTTGGCAGCACTGAAAGAGAACAGC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAACACGCATTCTAACTaGTTGAGTCGAATATCTGGA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLNTHSN*LSRISG
Trigger: TCCAGATATTCGACTCAAGCAGTTAGAATGCGTGTT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGATGTAATAAAGTTCCATaGGCACCAATTGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGCNKVP*APIVEN
Trigger: GTTTTCTACAATTGGTGCGCATGGAACTTTATTACA...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTTGTAATAAAGTTCCATaGGCACCAATTGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSCNKVP*APIVEN
Trigger: GTTTTCTACAATTGGTGCGCATGGAACTTTATTACA...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTTCCAGATAACAGTGTaGCAGGTTGAATGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLFQITV*QVECCN
Trigger: ATTACAGCATTCAACCTGGCACACTGTTATCTGGAA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACAAATCTCCTAAAGGCTaGAGCAAATATCTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNKSPKG*SKYLLV
Trigger: CACTAGAAGATATTTGCTGCAGCCTTTAGGAGATTT...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp TTGGAAGAGGGCATTTACCACTTAATCTTTCATCCTCTATATAGCGATGTAGTAACTGAAATAGCACTGTaGAATATGACTCCCAACTTT +
Preference number: 4 (lower is better)
Translates to: LEEGIYHLIFHPLYSDVVTEIAL*NMTPNF
Trigger: AAAGTTGGGAGTCATATTGCACAGTGCTATTTCAGT...TACTACATCGCTATATAGAGGATGAAAGATTAAGTGGTAAATGCCCTCTTCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp ATAAAAGATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTGCTGGATACATTATCTaGATGTTTTCTGGTCCTACA +
Preference number: 4 (lower is better)
Translates to: IKDPSAFTISRKTLVECCAGYII*MFSGPT
Trigger: TGTAGGACCAGAAAACATGCAGATAATGTATCCAGC...ACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACCTGCCAAGAATTATCTaGAGTAAGAAATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNLPRII*SKKCPS
Trigger: AGAAGGACATTTCTTACTGCAGATAATTCTTGGCAG...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGATTAAAGCCTTACACTaGTGTTCATTCAGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLIKALH*CSFRSL
Trigger: AAGGCTCCTGAATGAACAGCAGTGTAAGGCTTTAAT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGCAGATAGGAAAATATaGTTTTTCAACTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLADRKI*FFNWCW
Trigger: CCAGCACCAGTTGAAAAACCATATTTTCCTATCTGC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAAAGAACCTTCTTCAGTaGTGGTTTGACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVKNLLQ*WFDILF
Trigger: AAACAGAATGTCAAACCACCACTGAAGAAGGTTCTT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp GTTAATCCTGCTTTAATAAGAGAAGTTAAAGCTTCTGCTCCCCATTCTCTCATTAAGAACCTTCTTCAGTaGTGGTTTGACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VNPALIREVKASAPHSLIKNLLQ*WFDILF
Trigger: AAACAGAATGTCAAACCACCACTGAAGAAGGTTCTT...AATGAGAGAATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGATTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGAGAGTGGAGGATCATaGTTAAATGTTAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLESGGS*LNVNPA
Trigger: AGCAGGATTAACATTTAACCATGATCCTCCACTCTC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGATCAGTAACAATGGGTaGCTCAGAGCTACTATATCT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLISNNG*LRATIS
Trigger: AGATATAGTAGCTCTGAGCCACCCATTGTTACTGAT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACGCTGTAAGAAAAGGCTaGCTAGGAATAAAAGTTAGT +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNAVRKG*LGIKVS
Trigger: ACTAACTTTTATTCCTAGCCAGCCTTTTCTTACAGC...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAACAAATGCCAACAACTaGTCAAATATAGCTGGATAC +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVTNANN*SNIAGY
Trigger: GTATCCAGCTATATTTGACCAGTTGTTGGCATTTGT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp ATTTCCTTGTACCAGTACTGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCACAAATGCCAACAACTaGTCAAATATAGCTGGATAC +
Preference number: 4 (lower is better)
Translates to: ISLYQYWLFYNISVSFIFTNANN*SNIAGY
Trigger: GTATCCAGCTATATTTGACCAGTTGTTGGCATTTGT...GAAGATGAACGACACAGAGATATTATAGAACAACCAGTACTGGTACAAGGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCGATGTAGTACATCTTaGGACCTCTTTAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLRCSTS*DLFKST
Trigger: AGTGCTTTTAAAGAGGTCCCAAGATGTACTACATCG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR TCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAGTCGAATATCTGGATaGTTAATATTGGACATCTCC +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLSRISG*LILDIS
Trigger: GGAGATGTCCAATATTAATCATCCAGATATTCGACT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTACTGGAAAAGCATATATaGATCTTTAGCACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVLEKHI*IFSTRF
Trigger: AAACCTTGTGCTAAAGATGCATATATGCTTTTCCAG...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp TATGACTCCCAACTTTTGCAAGTCATCCATATTGAAACCAGTTTTTATGTGTTGGGAACCTTTGCATATTaGAGTTATAAAGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: YDSQLLQVIHIETSFYVLGTFAY*SYKGIS
Trigger: AGAGATGCCTTTATAACTGCAATATGCAAAGGTTCC...CAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR GCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGACATCTACAACTATTTaGAGGCAAGTACAAGGCATT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLTSTTI*RQVQGI
Trigger: AATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR GCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTATGTAATAAAGTTCCATaGGCACCAATTGTAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVCNKVP*APIVEN
Trigger: GTTTTCTACAATTGGTGCGCATGGAACTTTATTACA...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAATGACTCCCAACTTTTaGAAGTCATCCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVMTPNF*KSSILK
Trigger: TTTCAATATGGATGACTTGCAAAAGTTGGGAGTCAT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR GCA 90 bp CAACAGCAAAAAGAGATGGTTCCTTATTATTTCCATAGGCCATATCCATTGCTTATGACTCCCAACTTTTaGAAGTCATCCATATTGAAA +
Preference number: 4 (lower is better)
Translates to: QQQKEMVPYYFHRPYPLLMTPNF*KSSILK
Trigger: TTTCAATATGGATGACTTGCAAAAGTTGGGAGTCAT...AAGCAATGGATATGGCCTATGGAAATAATAAGGAACCATCTCTTTTTGCTGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp GATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTTTCATATCCTTGTACCAGTACTaGTTGTTCTATAATATCTCT +
Preference number: 4 (lower is better)
Translates to: DPSAFTISRKTLVECCFISLYQY*LFYNIS
Trigger: AGAGATATTATAGAACAACCAGTACTGGTACAAGGA...TATGAAACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAAGAACCTTCTTCAGTaGTGGTTTGACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLKNLLQ*WFDILF
Trigger: AAACAGAATGTCAAACCACCACTGAAGAAGGTTCTT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACCAGTTTCTAACAATTTaGCAACAGCAAAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNQFLTI*QQQKEM
Trigger: CATCTCTTTTTGCTGTTGCCAAATTGTTAGAAACTG...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CCA 90 bp GATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTTTCATACAGTTTCTAACAATTTaGCAACAGCAAAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: DPSAFTISRKTLVECCFIQFLTI*QQQKEM
Trigger: CATCTCTTTTTGCTGTTGCCAAATTGTTAGAAACTG...TATGAAACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGACACAAATGGCCTTTTaGAGAACATCTAAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLTQMAF*RTSKAV
Trigger: TACAGCTTTAGATGTTCTCCAAAAGGCCATTTGTGT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAGGTAGTAGTAAGAGATaGAAAGCAAATGAAATTTGC +
Preference number: 4 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVGSSKR*KANEIC
Trigger: GCAAATTTCATTTGCTTTCCATCTCTTACTACTACC...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTCCTTGTACCAGTACTaGTTGTTCTATAATATCTCT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLSLYQY*LFYNIS
Trigger: AGAGATATTATAGAACAACCAGTACTGGTACAAGGA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCAGTTTCTAACAATTTaGCAACAGCAAAAAGAGATG +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLQFLTI*QQQKEM
Trigger: CATCTCTTTTTGCTGTTGCCAAATTGTTAGAAACTG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CCA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCTGGTCAAATATAGCTaGATACATTATCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLLVKYS*IHYLHV
Trigger: AACATGCAGATAATGTATCCAGCTATATTTGACCAG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS GCA 90 bp GCCGACTCTGGCCGAGAAACCCACAAGGCGGGCAGGTCCCTCCGCTaGCGCGGGGCCCAGCCACACCGGGTGTCACCAGCCAACCTGGCA +
Preference number: 5 (lower is better)
Translates to: ADSGRETHKAGRSLR*RGAQPHRVSPANLA
Trigger: TGCCAGGTTGGCTGGTGACACCCGGTGTGGCTGGGCCCCGCGGCAGCGGAGGGACCTGCCCGCCTTGTGGGTTTCTCGGCCAGAGTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS GCA 90 bp CCGGTGTCTCTGGTCCTTCAGCAGCCCGCTTCTTGGGCCCTGGGCTaGGAACCCGGAGCCTGCTCGAGCGTCCCCCAGCAGCTTCCCCGC +
Preference number: 5 (lower is better)
Translates to: PVSLVLQQPASWALG*EPGACSSVPQQLPR
Trigger: GCGGGGAAGCTGCTGGGGGACGCTCGAGCAGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGAAGGACCAGAGACACCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CCA 90 bp GGCAGCTCCCTCCCGGTGTCTCTGGTCCTTCAGCAGCCCGCTTCTTaGGCCCTGGGCTGCGAACCCGGAGCCTGCTCGAGCGTCCCCCAG +
Preference number: 5 (lower is better)
Translates to: GSSLPVSLVLQQPAS*ALGCEPGACSSVPQ
Trigger: CTGGGGGACGCTCGAGCAGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGGGAGCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CCA 90 bp CCCTCCCGGTGTCTCTGGTCCTTCAGCAGCCCGCTTCTTGGGCCCTaGGCTGCGAACCCGGAGCCTGCTCGAGCGTCCCCCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PSRCLWSFSSPLLGP*AANPEPARASPSSF
Trigger: GAAGCTGCTGGGGGACGCTCGAGCAGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS GCA 90 bp CTTCAGCAGCCCGCTTCTTGGGCCCTGGGCTGCGAACCCGGAGCCTaGTCGAGCGTCCCCCAGCAGCTTCCCCGCAACACCTCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LQQPASWALGCEPGA*SSVPQQLPRNTSGF
Trigger: AAAGCCAGAGGTGTTGCGGGGAAGCTGCTGGGGGACGCTCGAGCAGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CCA 90 bp ACGGTCAGCTCCTTAGGGCCACAGGCAGCTCCCTCCCGGTGTCTCTaGTCCTTCAGCAGCCCGCTTCTTGGGCCCTGGGCTGCGAACCCG +
Preference number: 5 (lower is better)
Translates to: TVSSLGPQAAPSRCL*SFSSPLLGPWAANP
Trigger: CGGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGGGAGCTGCCTGTGGCCCTAAGGAGCTGACCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549286.1
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CCA 90 bp ATCCTCCAAGGTCCCAGCCAATTTCCGAGAGGTACAAACAAGCTCTaGCACGGTCAGCTCCTTAGGGCCACAGGCAGCTCCCTCCCGGTG +
Preference number: 5 (lower is better)
Translates to: ILQGPSQFPRGTNKL*HGQLLRATGSSLPV
Trigger: CACCGGGAGGGAGCTGCCTGTGGCCCTAAGGAGCTGACCGTGCCAGAGCTTGTTTGTACCTCTCGGAAATTGGCTGGGACCTTGGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549286.1
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS-3UTR CAA 90 bp AGGTCCACCAGGTCCCCATATCCTAGGGGTTTCCTTGCTCTGAGCAGTTTCACTTCAGCAGCCCGCTTCTaGGGCCCTGGGCTGCGAACC +
Preference number: 5 (lower is better)
Translates to: RSTRSPYPRGFLALSSFTSAARF*GPGLRT
Trigger: GGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGA...AGTGAAACTGCTCAGAGCAAGGAAACCCCTAGGATATGGGGACCTGGTGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR CAA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATTCAGCAGCCCGCTTCTaGGGCCCTGGGCTGCGAACC +
Preference number: 5 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDSAARF*GPGLRT
Trigger: GGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGA...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGTCAGCAGCCCGCTTCTaGGGCCCTGGGCTGCGAACC +
Preference number: 5 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQSAARF*GPGLRT
Trigger: GGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGA...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTCAGCAGCCCGCTTCTaGGGCCCTGGGCTGCGAACC +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFISAARF*GPGLRT
Trigger: GGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGGTCCACCAGGTCCCCATATCCTAGGGGTTTCCTTGCTCTGAGCAGTTTCACTGGTGGGAATTTCTTCTaGCACTCCAGTGACAAGGCG +
Preference number: 5 (lower is better)
Translates to: RSTRSPYPRGFLALSSFTGGNFF*HSSDKA
Trigger: CGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACC...AGTGAAACTGCTCAGAGCAAGGAAACCCCTAGGATATGGGGACCTGGTGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCCACGTCTCAGCCCATaGCTTCTCGGCGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLPRLSP*LLGGVP
Trigger: AGGGACACCGCCGAGAAGCAATGGGCTGAGACGTGG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS TCA 90 bp TTCAGCAGCCTCTTTGACAGGTGGGAATTTCTTCTTGCACTCCAGTaGCAAGGCGCGCAAGTCGCTCTGCATATTCTCCAGCAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: FSSLFDRWEFLLALQ*QGAQVALHILQQLL
Trigger: AAGAAGCTGCTGGAGAATATGCAGAGCGACTTGCGCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACCTGTCAAAGAGGCTGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000549286.1
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS-3UTR CAA 90 bp AGGTCCACCAGGTCCCCATATCCTAGGGGTTTCCTTGCTCTGAGCAGTTTCACTGATTCAGCAGCCTCTTaGACAGGTGGGAATTTCTTC +
Preference number: 5 (lower is better)
Translates to: RSTRSPYPRGFLALSSFTDSAAS*TGGNFF
Trigger: GAAGAAATTCCCACCTGTCAAAGAGGCTGCTGAATC...AGTGAAACTGCTCAGAGCAAGGAAACCCCTAGGATATGGGGACCTGGTGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549286.1
CDS-3UTR CAA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCTGTAGAAAACAGAGTTaGCCCTGCACTCTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPCRKQS*PCTLPD
Trigger: GTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTACA...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS TCA 90 bp AACGATTGCCTCTTTGACAGGTGGGAATTTCTTCTTGCACTCCAGTaGCAAGGCGCGCAAGTCGCTCTGCATATTCTCCAGCAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: NDCLFDRWEFLLALQ*QGAQVALHILQQLL
Trigger: AAGAAGCTGCTGGAGAATATGCAGAGCGACTTGCGCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACCTGTCAAAGAGGCAATCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549378.5
CDS TCA 90 bp CATCTGTACCTCTTTGACAGGTGGGAATTTCTTCTTGCACTCCAGTaGCAAGGCGCGCAAGTCGCTCTGCATATTCTCCAGCAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: HLYLFDRWEFLLALQ*QGAQVALHILQQLL
Trigger: AAGAAGCTGCTGGAGAATATGCAGAGCGACTTGCGCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACCTGTCAAAGAGGTACAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTATCAGCAGCCCGCTTCTaGGGCCCTGGGCTGCGAACC +
Preference number: 5 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVSAARF*GPGLRT
Trigger: GGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGA...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCTCTTCTGCCTGCTTTaGCTGTGCTGCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGILFCLL*LCCLFL
Trigger: AAGGAAGAGGCAGCACAGCAAAAGCAGGCAGAAGAG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTAAGGGGGCCACCCACTaGCTTCACACTAAGACTGGC +
Preference number: 5 (lower is better)
Translates to: NKHLRALQIASVIQQGHSKGATH*LHTKTG
Trigger: GCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAAGGGGGCCACCCACTaGCTTCACACTAAGACTGGC +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIKGATH*LHTKTG
Trigger: GCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCGGCAAGTACAAGGCATaGTTGGTAGAAAATCTGTCA +
Preference number: 5 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPGKYKA*LVENLS
Trigger: TGACAGATTTTCTACCAACAATGCCTTGTACTTGCC...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCAGCAACCATCCTCTCAAACCACGTCTCAGCCCATaGCTTCTCGGCGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: WLFYNISVSFIFSNHPLKPRLSP*LLGGVP
Trigger: AGGGACACCGCCGAGAAGCAATGGGCTGAGACGTGG...TTTGAGAGGATGGTTGCTGAAGATGAACGACACAGAGATATTATAGAACAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGAAGCAGGAAACTGCTaGAACCCGGGAAGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIEAGNC*NPGSRG
Trigger: ACCTCTGCTTCCCGGGTTCAAGCAGTTTCCTGCTTC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCAGGGGAACTTTACCTaGGCAAAAACGCAACAGTGG +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGIQGNFT*AKTQQW
Trigger: CCACTGTTGCGTTTTTGCCAAGGTAAAGTTCCCCTG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTGGTGGGAATTTCTTCTaGCACTCCAGTGACAAGGCG +
Preference number: 5 (lower is better)
Translates to: NKHLRALQIASVIQQGHSGGNFF*HSSDKA
Trigger: CGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACC...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCGGACATACCCTTTCTTaGAGGAGGAAACTAAATTCT +
Preference number: 5 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPGHTLS*RRKLNS
Trigger: AGAATTTAGTTTCCTCCTCAAAGAAAGGGTATGTCC...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp ACTCAAGTAATTCGAGGCCAAACGTCCGAGTCATTTCTGTCATGCCCACTAGCCGGCTTTAGCACTGCCTaGAACTGTGATTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: TQVIRGQTSESFLSCPLAGFSTA*NCDCQN
Trigger: ATTCTGACAATCACAGTTCAAGGCAGTGCTAAAGCC...GGCTAGTGGGCATGACAGAAATGACTCGGACGTTTGGCCTCGAATTACTTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATGTTCTGTCGACTGTGTaGGTGAAGAACCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDVLSTV*VKNLLQ
Trigger: CTGAAGAAGGTTCTTCACCAACACAGTCGACAGAAC...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGTTCTGTCGACTGTGTaGGTGAAGAACCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGIVLSTV*VKNLLQ
Trigger: CTGAAGAAGGTTCTTCACCAACACAGTCGACAGAAC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGCTCTTCTGCCTGCTTTaGCTGTGCTGCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQLFCLL*LCCLFL
Trigger: AAGGAAGAGGCAGCACAGCAAAAGCAGGCAGAAGAG...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTGTAGAAAACAGAGTTaGCCCTGCACTCTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGICRKQS*PCTLPD
Trigger: GTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTACA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTACCACGTCTCAGCCCATaGCTTCTCGGCGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVPRLSP*LLGGVP
Trigger: AGGGACACCGCCGAGAAGCAATGGGCTGAGACGTGG...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACCCACGTCTCAGCCCATaGCTTCTCGGCGGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNPRLSP*LLGGVP
Trigger: AGGGACACCGCCGAGAAGCAATGGGCTGAGACGTGG...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTACCTACAGCAGTCTCTaGAAAACTTGGTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGITYSSL*KTWLPI
Trigger: GATGGGCAACCAAGTTTTCAAGAGACTGCTGTAGGT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCTCTCATTCGAGAGTTaGGATGCTGGCAGACCTTCT +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLLSFES*DAGRPS
Trigger: AGAAGGTCTGCCAGCATCCAAACTCTCGAATGAGAG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641654.1
CDS-3UTR CAA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGGGTGGGAATTTCTTCTaGCACTCCAGTGACAAGGCG +
Preference number: 5 (lower is better)
Translates to: RFSILNSGCWWLHEILKRGGNFF*HSSDKA
Trigger: CGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACC...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAACAACAGTAACAACTaGTCGCACTGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLNNSNN*SHCSSS
Trigger: GCTGCTGCTACAGTGCGACAAGTTGTTACTGTTGTT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTTGTTTCCAGCTTGGTaGCTTGTTGCAGGATTTCCA +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGILFPAW*LVAGFP
Trigger: TGGAAATCCTGCAACAAGCAACCAAGCTGGAAACAA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp ACTCAAGTAATTCGAGGCCAAACGTCCGAGTCATTTCTGTCATGCCCACTAGCCGAGCCACCTAAATTATaGTTTCCAGCTTGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: TQVIRGQTSESFLSCPLAEPPKL*FPAWLL
Trigger: AAGCAACCAAGCTGGAAACAATAATTTAGGTGGCTC...GGCTAGTGGGCATGACAGAAATGACTCGGACGTTTGGCCTCGAATTACTTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGGCTTTAGCACTGCCTaGAACTGTGATTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGIGFSTA*NCDCQN
Trigger: ATTCTGACAATCACAGTTCAAGGCAGTGCTAAAGCC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GTGCAGCAAGAAGACCACACCAGCAGGCATTCACCATTTCTTCCCAAACAGCCCATACACTGGATATTTTaGGAAGTCAGCATTACTGTC +
Preference number: 5 (lower is better)
Translates to: VQQEDHTSRHSPFLPKQPIHWIF*EVSITV
Trigger: GACAGTAATGCTGACTTCCAAAAATATCCAGTGTAT...GGGCTGTTTGGGAAGAAATGGTGAATGCCTGCTGGTGTGGTCTTCTTGCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCTGTCATCACTGCTGTaGTTAGAACTGTACTGGGTC +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLLSSLL*LELYWV
Trigger: GACCCAGTACAGTTCTAACAACAGCAGTGATGACAG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GCCTTGAACTGTGATTGTCAGAATAGGTATCCAGGTTCCCCTATATTCAAATGCCTCTTCTGCCTGCTTTaGCTGTGCTGCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: ALNCDCQNRYPGSPIFKCLFCLL*LCCLFL
Trigger: AAGGAAGAGGCAGCACAGCAAAAGCAGGCAGAAGAG...GCATTTGAATATAGGGGAACCTGGATACCTATTCTGACAATCACAGTTCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGCTGTTACTTGTTGCCTaGGAAGAGGGCATTTACCAC +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLLLLVA*EEGIYH
Trigger: GTGGTAAATGCCCTCTTCCAAGGCAACAAGTAACAG...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTCAAGATTCTCCATTTaGAACTCTGGATGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGISRFSI*NSGCWW
Trigger: CCACCAGCATCCAGAGTTCAAAATGGAGAATCTTGA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTTCATTCAGGAGCCTTaGTTGATGTGCAAGCCTGTA +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGIFIQEP*LMCKPV
Trigger: TACAGGCTTGCACATCAACAAAGGCTCCTGAATGAA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTCAGGGGAACTTTACCTaGGCAAAAACGCAACAGTGG +
Preference number: 5 (lower is better)
Translates to: NKHLRALQIASVIQQGHSQGNFT*AKTQQW
Trigger: CCACTGTTGCGTTTTTGCCAAGGTAAAGTTCCCCTG...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTGATTCAGCAGCCTCTTaGACAGGTGGGAATTTCTTC +
Preference number: 5 (lower is better)
Translates to: NKHLRALQIASVIQQGHSDSAAS*TGGNFF
Trigger: GAAGAAATTCCCACCTGTCAAAGAGGCTGCTGAATC...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGTGATCTTCGGTTCCTaGGTTCCACAACCCATTAAA +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLVIFGS*VPQPIK
Trigger: TTTAATGGGTTGTGGAACCAAGGAACCGAAGATCAC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp ACCTTCCAGATAACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCAAACAACAGTAACAACTaGTCGCACTGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TFQITVCQVECCNKVPCANNSNN*SHCSSS
Trigger: GCTGCTGCTACAGTGCGACAAGTTGTTACTGTTGTT...TGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTCTTTAGCACAAGGTTaGAGGGTACTGACAGATCTT +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGISLAQG*RVLTDL
Trigger: AAGATCTGTCAGTACCCTCAAACCTTGTGCTAAAGA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp CCTGAGTTAGCTGGTGCTGAGACTGAGCCACCTAAATTATTGTTTCCAGCTTGGTCTTTAGCACAAGGTTaGAGGGTACTGACAGATCTT +
Preference number: 5 (lower is better)
Translates to: PELAGAETEPPKLLFPAWSLAQG*RVLTDL
Trigger: AAGATCTGTCAGTACCCTCAAACCTTGTGCTAAAGA...CCAAGCTGGAAACAATAATTTAGGTGGCTCAGTCTCAGCACCAGCTAACTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATACCTGCGGAAAATCATaGAGGACTGACTCAAGTAAT +
Preference number: 5 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDTCGKS*RTDSSN
Trigger: ATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGGT...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCACAGAATCTGTGTATaGATTCCACCGCAACAGCTC +
Preference number: 5 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSHRICV*IPPQQL
Trigger: GAGCTGTTGCGGTGGAATCAATACACAGATTCTGTG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCACAGAATCTGTGTATaGATTCCACCGCAACAGCTC +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIHRICV*IPPQQL
Trigger: GAGCTGTTGCGGTGGAATCAATACACAGATTCTGTG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGGCTTTAGCACTGCCTaGAACTGTGATTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLGFSTA*NCDCQN
Trigger: ATTCTGACAATCACAGTTCAAGGCAGTGCTAAAGCC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGTTCTGTCGACTGTGTaGGTGAAGAACCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSVLSTV*VKNLLQ
Trigger: CTGAAGAAGGTTCTTCACCAACACAGTCGACAGAAC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTACGGAATATGATTTGTaGGAAAGTGTAGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGITEYDL*ESVAAV
Trigger: CACTGCAGCTACACTTTCCAACAAATCATATTCCGT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTCTGTCATCACTGCTGTaGTTAGAACTGTACTGGGTC +
Preference number: 5 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSLSSLL*LELYWV
Trigger: GACCCAGTACAGTTCTAACAACAGCAGTGATGACAG...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp CTGTCACAACCAACTGAAGACACTGGAATGCAGTTCGTATCAAGGATTCTCCTTCTGTCATCACTGCTGTaGTTAGAACTGTACTGGGTC +
Preference number: 5 (lower is better)
Translates to: LSQPTEDTGMQFVSRILLLSSLL*LELYWV
Trigger: GACCCAGTACAGTTCTAACAACAGCAGTGATGACAG...AAGGAGAATCCTTGATACGAACTGCATTCCAGTGTCTTCAGTTGGTTGTGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTCATAGGCCATATCCATaGCTTCTAGAGACAAGGAGC +
Preference number: 5 (lower is better)
Translates to: NKHLRALQIASVIQQGHSHRPYP*LLETRS
Trigger: GCTCCTTGTCTCTAGAAGCAATGGATATGGCCTATG...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCATAGGCCATATCCATaGCTTCTAGAGACAAGGAGC +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIHRPYP*LLETRS
Trigger: GCTCCTTGTCTCTAGAAGCAATGGATATGGCCTATG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp ACGGCACATAATTCAAGGCTACCCATTCCGCCGGTGCAAATAGTTGGATCTGATCAGCTTCCTGTAAACTaGTCAAAACTGCTTCGGTAT +
Preference number: 5 (lower is better)
Translates to: TAHNSRLPIPPVQIVGSDQLPVN*SKLLRY
Trigger: ATACCGAAGCAGTTTTGACAAGTTTACAGGAAGCTG...ATCAGATCCAACTATTTGCACCGGCGGAATGGGTAGCCTTGAATTATGTGCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCATTTGCAATGTGCTTaGTTTCCAGCTGTCCATACT +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGIHLQCA*FPAVHT
Trigger: AGTATGGACAGCTGGAAACAAAGCACATTGCAAATG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCTGTTACTTGTTGCCTaGGAAGAGGGCATTTACCAC +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFILLLVA*EEGIYH
Trigger: GTGGTAAATGCCCTCTTCCAAGGCAACAAGTAACAG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGTCAAGATTCTCCATTTaGAACTCTGGATGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLSRFSI*NSGCWW
Trigger: CCACCAGCATCCAGAGTTCAAAATGGAGAATCTTGA...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTTGAGAGCTTCCTTTTaGAATCTCCTGGCATCGAAT +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGILRASF*NLLASN
Trigger: ATTCGATGCCAGGAGATTCAAAAAGGAAGCTCTCAA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAGCTGTAATAAGCACTaGAGAGCGCTCCAAATAGCT +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLSCNKH*RALQIA
Trigger: AGCTATTTGGAGCGCTCTCAAGTGCTTATTACAGCT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAAGGTGGGAATTTCTTCTaGCACTCCAGTGACAAGGCG +
Preference number: 5 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEGGNFF*HSSDKA
Trigger: CGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACC...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGAGCCACCTAAATTATaGTTTCCAGCTTGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLEPPKL*FPAWLL
Trigger: AAGCAACCAAGCTGGAAACAATAATTTAGGTGGCTC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAGGCTTTAGCACTGCCTaGAACTGTGATTGTCAGAAT +
Preference number: 5 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEGFSTA*NCDCQN
Trigger: ATTCTGACAATCACAGTTCAAGGCAGTGCTAAAGCC...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGACGGAATATGATTTGTaGGAAAGTGTAGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLTEYDL*ESVAAV
Trigger: CACTGCAGCTACACTTTCCAACAAATCATATTCCGT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGCTGTCATCACTGCTGTaGTTAGAACTGTACTGGGTC +
Preference number: 5 (lower is better)
Translates to: RFSILNSGCWWLHEILKRLSSLL*LELYWV
Trigger: GACCCAGTACAGTTCTAACAACAGCAGTGATGACAG...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAACATAGGCCATATCCATaGCTTCTAGAGACAAGGAGC +
Preference number: 5 (lower is better)
Translates to: TVCQVECCNKVPCAPIVEHRPYP*LLETRS
Trigger: GCTCCTTGTCTCTAGAAGCAATGGATATGGCCTATG...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGACTCTCATTCGAGAGTTaGGATGCTGGCAGACCTCAA +
Preference number: 5 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRLSFES*DAGRPQ
Trigger: TTGAGGTCTGCCAGCATCCAAACTCTCGAATGAGAG...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp CTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTGTCACAACCAACTCTCTCATTCGAGAGTTaGGATGCTGGCAGACCTCAA +
Preference number: 5 (lower is better)
Translates to: LFAGKYKALLVENLSQPTLSFES*DAGRPQ
Trigger: TTGAGGTCTGCCAGCATCCAAACTCTCGAATGAGAG...AGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTTATCAAGGATTCTCCTaGATCATTTCTGATTGCTCC +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGIYQGFS*IISDCS
Trigger: GGAGCAATCAGAAATGATCAAGGAGAATCCTTGATA...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTGACTCAATCTTTTCTTaGTCTGCAGTGGTAGAGGAC +
Preference number: 5 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSDSIFS*SAVVED
Trigger: GTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTC...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTCTCATTGCTGATAAGTaGAACTACCTCGACATCAAT +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGILIADK*NYLDIN
Trigger: ATTGATGTCGAGGTAGTTCAACTTATCAGCAATGAG...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAATCAAGATTCTCCATTTaGAACTCTGGATGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AGGCMKSLKGTSASLSAESRFSI*NSGCWW
Trigger: CCACCAGCATCCAGAGTTCAAAATGGAGAATCTTGA...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp ACCTTCCAGATAACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCATCAAGATTCTCCATTTaGAACTCTGGATGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: TFQITVCQVECCNKVPCASRFSI*NSGCWW
Trigger: CCACCAGCATCCAGAGTTCAAAATGGAGAATCTTGA...TGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTAGAGATAGTCTGGCATaGATATGGACAGGCAGTTTC +
Preference number: 5 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSRDSLA*IWTGSF
Trigger: GAAACTGCCTGTCCATATCAATGCCAGACTATCTCT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTATATATGCGGTTTCCTaGACTAGCTGTAATAAGCAC +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGIIYAVS*TSCNKH
Trigger: GTGCTTATTACAGCTAGTCAAGGAAACCGCATATAT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACTCATCTGTACCTCTTaGACAGGTGGGAATTTCTTC +
Preference number: 5 (lower is better)
Translates to: AGGCMKSLKGTSASLSAELICTS*TGGNFF
Trigger: GAAGAAATTCCCACCTGTCAAAGAGGTACAGATGAG...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGGACATACCCTTTCTTaGAGGAGGAAACTAAATTCT +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLGHTLS*RRKLNS
Trigger: AGAATTTAGTTTCCTCCTCAAAGAAAGGGTATGTCC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp CTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTGTCACAACCAACTCACAGAATCTGTGTATaGATTCCACCGCAACAGCTC +
Preference number: 5 (lower is better)
Translates to: LFAGKYKALLVENLSQPTHRICV*IPPQQL
Trigger: GAGCTGTTGCGGTGGAATCAATACACAGATTCTGTG...AGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGATTATTGTTTCCAGCTaGGTTGCTTGTTGCAGGATT +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLIIVSS*VACCRI
Trigger: AATCCTGCAACAAGCAACCAAGCTGGAAACAATAAT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTGAGCCACCTAAATTATaGTTTCCAGCTTGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: NKHLRALQIASVIQQGHSEPPKL*FPAWLL
Trigger: AAGCAACCAAGCTGGAAACAATAATTTAGGTGGCTC...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTCCATTTGGTCTGATGTaGACTGTAAATCCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: NKHLRALQIASVIQQGHSPFGLM*TVNPAV
Trigger: AACAGCAGGATTTACAGTCAACATCAGACCAAATGG...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGGCAAGTACAAGGCATaGTTGGTAGAAAATCTGTCA +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIGKYKA*LVENLS
Trigger: TGACAGATTTTCTACCAACAATGCCTTGTACTTGCC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAACATCTACAACTATTaGCAGGCAAGTACAAGGCAT +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLNIYNY*QASTRH
Trigger: ATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTACTCTTCTGCCTGCTTTaGCTGTGCTGCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVLFCLL*LCCLFL
Trigger: AAGGAAGAGGCAGCACAGCAAAAGCAGGCAGAAGAG...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTCAGCTTCCTGTAAACTaGTCAAAACTGCTTCGGTAT +
Preference number: 5 (lower is better)
Translates to: NKHLRALQIASVIQQGHSQLPVN*SKLLRY
Trigger: ATACCGAAGCAGTTTTGACAAGTTTACAGGAAGCTG...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCATTTGCAATGTGCTTaGTTTCCAGCTGTCCATACT +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIHLQCA*FPAVHT
Trigger: AGTATGGACAGCTGGAAACAAAGCACATTGCAAATG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTAAATCTTCAAAAGTATaGGCTAGTTCTGGCCACATA +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGIKSSKV*ASSGHI
Trigger: TATGTGGCCAGAACTAGCCAATACTTTTGAAGATTT...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTATTCAGGAGCCTTTGTaGATGTGCAAGCCTGTAATA +
Preference number: 5 (lower is better)
Translates to: NKHLRALQIASVIQQGHSIQEPL*MCKPVI
Trigger: TATTACAGGCTTGCACATCAACAAAGGCTCCTGAAT...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp CAGGCACTGGCAGTGACAGCAAGTGACGATGTGAGGCTTAAAACTCATGGTATTGTATATCAGTTCCCTTaGTTAACAAAGGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: QALAVTASDDVRLKTHGIVYQFP*LTKAGY
Trigger: ATAACCAGCCTTTGTTAACAAAGGGAACTGATATAC...AATACCATGAGTTTTAAGCCTCACATCGTCACTTGCTGTCACTGCCAGTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCACTATGTTTATGTTTaGAACTGTAGGGCATGGTCC +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIHYVYV*NCRAWS
Trigger: GGACCATGCCCTACAGTTCAAAACATAAACATAGTG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTTTGAGAGCTTCCTTTTaGAATCTCCTGGCATCGAAT +
Preference number: 5 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSLRASF*NLLASN
Trigger: ATTCGATGCCAGGAGATTCAAAAAGGAAGCTCTCAA...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGGGTGGCATATGTCTGTaGTCCAGCAATATGAATAAA +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLGGICL*SSNMNK
Trigger: TTTATTCATATTGCTGGACAACAGACATATGCCACC...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGGTGGGAATTTCTTCTaGCACTCCAGTGACAAGGCG +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLGGNFF*HSSDKA
Trigger: CGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTAACAACAGTAACAACTaGTCGCACTGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: STKVGYKAITCAQVFPSTNNSNN*SHCSSS
Trigger: GCTGCTGCTACAGTGCGACAAGTTGTTACTGTTGTT...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTCTGTTACTATTTCCTaGTACCAGTACTGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFISVTIS*YQYWLF
Trigger: GAACAACCAGTACTGGTACAAGGAAATAGTAACAGA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTACCTGCGGAAAATCATaGAGGACTGACTCAAGTAAT +
Preference number: 5 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTTCGKS*RTDSSN
Trigger: ATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGGT...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGGACATACCCTTTCTTaGAGGAGGAAACTAAATTCT +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIGHTLS*RRKLNS
Trigger: AGAATTTAGTTTCCTCCTCAAAGAAAGGGTATGTCC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTTATTAGCACACAGTATTATTGTTTCCAGCTaGGTTGCTTGTTGCAGGATT +
Preference number: 5 (lower is better)
Translates to: SAPNSFCHTARTQLLAHSIIVSS*VACCRI
Trigger: AATCCTGCAACAAGCAACCAAGCTGGAAACAATAAT...ACTGTGTGCTAATAACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTGAGCCACCTAAATTATaGTTTCCAGCTTGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTEPPKL*FPAWLL
Trigger: AAGCAACCAAGCTGGAAACAATAATTTAGGTGGCTC...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGACGGAATATGATTTGTaGGAAAGTGTAGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: RFSILNSGCWWLHEILKRTEYDL*ESVAAV
Trigger: CACTGCAGCTACACTTTCCAACAAATCATATTCCGT...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp ACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCACCAATTGTAGAAACGGAATATGATTTGTaGGAAAGTGTAGCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: TVCQVECCNKVPCAPIVETEYDL*ESVAAV
Trigger: CACTGCAGCTACACTTTCCAACAAATCATATTCCGT...TTCTACAATTGGTGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAACATAGGCCATATCCATaGCTTCTAGAGACAAGGAGC +
Preference number: 5 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEHRPYP*LLETRS
Trigger: GCTCCTTGTCTCTAGAAGCAATGGATATGGCCTATG...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACCTCTCATTCGAGAGTTaGGATGCTGGCAGACCTCAA +
Preference number: 5 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNLSFES*DAGRPQ
Trigger: TTGAGGTCTGCCAGCATCCAAACTCTCGAATGAGAG...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAAGTACAAGGCATTGTaGGTAGAAAATCTGTCACAA +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLKYKAL*VENLSQ
Trigger: TTGTGACAGATTTTCTACCAACAATGCCTTGTACTT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAACATCTACAACTATTaGCAGGCAAGTACAAGGCAT +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFINIYNY*QASTRH
Trigger: ATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp ACCTTCCAGATAACAGTGTGCCAGGTTGAATGCTGTAATAAAGTTCCATGCGCAACTAATATTGAGTTCTaGGTTATGGAGGCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: TFQITVCQVECCNKVPCATNIEF*VMEAKA
Trigger: AGCTTTGGCCTCCATAACCAAGAACTCAATATTAGT...TGCGCATGGAACTTTATTACAGCATTCAACCTGGCACACTGTTATCTGGAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTACTAATATTGAGTTCTaGGTTATGGAGGCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFITNIEF*VMEAKA
Trigger: AGCTTTGGCCTCCATAACCAAGAACTCAATATTAGT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGATGTAGAAAACAGAGTTaGCCCTGCACTCTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGCRKQS*PCTLPD
Trigger: GTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTACA...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAAATATCTTCTAGTGTaGAAGATCCTTGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLKYLLV*KILATP
Trigger: TGGAGTAGCAAGGATCTTCAACACTAGAAGATATTT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGCATTTGCAATGTGCTTaGTTTCCAGCTGTCCATACT +
Preference number: 5 (lower is better)
Translates to: RFSILNSGCWWLHEILKRHLQCA*FPAVHT
Trigger: AGTATGGACAGCTGGAAACAAAGCACATTGCAAATG...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp AGTGTTCTGCCTTGGCTAGACAGACTTCACCTACAGCAGTCTCTTGAAAACTTGAAATCTTCAAAAGTATaGGCTAGTTCTGGCCACATA +
Preference number: 5 (lower is better)
Translates to: SVLPWLDRLHLQQSLENLKSSKV*ASSGHI
Trigger: TATGTGGCCAGAACTAGCCAATACTTTTGAAGATTT...CAAGTTTTCAAGAGACTGCTGTAGGTGAAGTCTGTCTAGCCAAGGCAGAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTCTGTTACTTGTTGCCTaGGAAGAGGGCATTTACCAC +
Preference number: 5 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSLLLVA*EEGIYH
Trigger: GTGGTAAATGCCCTCTTCCAAGGCAACAAGTAACAG...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGGTGGCATATGTCTGTaGTCCAGCAATATGAATAAA +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIGGICL*SSNMNK
Trigger: TTTATTCATATTGCTGGACAACAGACATATGCCACC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp AATAAGCACTTGAGAGCGCTCCAAATAGCTTCTGTCATACAGCAAGGACACAGTCTTAACATTCAGTGGTaGTCTGGTGAAAGGCAAAAA +
Preference number: 5 (lower is better)
Translates to: NKHLRALQIASVIQQGHSLNIQW*SGERQK
Trigger: TTTTTGCCTTTCACCAGACAACCACTGAATGTTAAG...ACTGTGTCCTTGCTGTATGACAGAAGCTATTTGGAGCGCTCTCAAGTGCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAGTGATCTTCGGTTCCTaGGTTCCACAACCCATTAAA +
Preference number: 5 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGVIFGS*VPQPIK
Trigger: TTTAATGGGTTGTGGAACCAAGGAACCGAAGATCAC...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAACCTGCGGAAAATCATaGAGGACTGACTCAAGTAAT +
Preference number: 5 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRTCGKS*RTDSSN
Trigger: ATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGGT...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTTTGTTTCCAGCTTGGTaGCTTGTTGCAGGATTTCCA +
Preference number: 5 (lower is better)
Translates to: STKVGYKAITCAQVFPSTLFPAW*LVAGFP
Trigger: TGGAAATCCTGCAACAAGCAACCAAGCTGGAAACAA...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR CAA 90 bp TGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCAGCAACCATCCTCTCAAATTGTTTCCAGCTTGGTaGCTTGTTGCAGGATTTCCA +
Preference number: 5 (lower is better)
Translates to: WLFYNISVSFIFSNHPLKLFPAW*LVAGFP
Trigger: TGGAAATCCTGCAACAAGCAACCAAGCTGGAAACAA...TTTGAGAGGATGGTTGCTGAAGATGAACGACACAGAGATATTATAGAACAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTATTATTGTTTCCAGCTaGGTTGCTTGTTGCAGGATT +
Preference number: 5 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTIIVSS*VACCRI
Trigger: AATCCTGCAACAAGCAACCAAGCTGGAAACAATAAT...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp CTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTGTCACAACCAACTCCATTTGGTCTGATGTaGACTGTAAATCCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LFAGKYKALLVENLSQPTPFGLM*TVNPAV
Trigger: AACAGCAGGATTTACAGTCAACATCAGACCAAATGG...AGTTGGTTGTGACAGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGATACACTGGATATTTTaGGAAGTCAGCATTACTGTC +
Preference number: 5 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQIHWIF*EVSITV
Trigger: GACAGTAATGCTGACTTCCAAAAATATCCAGTGTAT...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTAAGTACAAGGCATTGTaGGTAGAAAATCTGTCACAA +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIKYKAL*VENLSQ
Trigger: TTGTGACAGATTTTCTACCAACAATGCCTTGTACTT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GCTGGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAAAAGTACAAGGCATTGTaGGTAGAAAATCTGTCACAA +
Preference number: 5 (lower is better)
Translates to: AGGCMKSLKGTSASLSAEKYKAL*VENLSQ
Trigger: TTGTGACAGATTTTCTACCAACAATGCCTTGTACTT...TTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAGGCAAGTACAAGGCATaGTTGGTAGAAAATCTGTCA +
Preference number: 5 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRGKYKA*LVENLS
Trigger: TGACAGATTTTCTACCAACAATGCCTTGTACTTGCC...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAGACTCAATCTTTTCTTaGTCTGCAGTGGTAGAGGAC +
Preference number: 5 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGDSIFS*SAVVED
Trigger: GTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTC...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTTATGACTCCCAACTTTaGCAAGTCATCCATATTGAA +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIYDSQL*QVIHIE
Trigger: TTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACCTGTTACTTGTTGCCTaGGAAGAGGGCATTTACCAC +
Preference number: 5 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNLLLVA*EEGIYH
Trigger: GTGGTAAATGCCCTCTTCCAAGGCAACAAGTAACAG...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp GGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTAATTTCTGTTACTTGTaGCCTTGGAAGAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: GCMKSLKGTSASLSAEQTNFCYL*PWKRAF
Trigger: AAATGCCCTCTTCCAAGGCAACAAGTAACAGAAATT...AGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTGTATATCAGTTCCCTTaGTTAACAAAGGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIVYQFP*LTKAGY
Trigger: ATAACCAGCCTTTGTTAACAAAGGGAACTGATATAC...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GGTGGCTGCATGAAATCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGGTATATCAGTTCCCTTaGTTAACAAAGGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: GGCMKSLKGTSASLSAEQVYQFP*LTKAGY
Trigger: ATAACCAGCCTTTGTTAACAAAGGGAACTGATATAC...CTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGATTTCATGCAGCCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTCAAATCATAAACTATTaGCTGCTGTGTTCACATGAC +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIQIINY*LLCSHD
Trigger: GTCATGTGAACACAGCAGCAAATAGTTTATGATTTG...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp ATTATACTACCAAGGGGGCCACCCACTTGCTTCACACTAAGACTGGCATTTATTATGAAATTTGCACAGTaGGGTCTGAAGCCTAATATT +
Preference number: 5 (lower is better)
Translates to: IILPRGPPTCFTLRLAFIMKFAQ*GLKPNI
Trigger: AATATTAGGCTTCAGACCCAACTGTGCAAATTTCAT...AATAAATGCCAGTCTTAGTGTGAAGCAAGTGGGTGGCCCCCTTGGTAGTATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS GCA 90 bp CATACAGCATTCTACCAAGAACCGGGAAAGATGTACTTTATTTGTTaGCAAGAGGTTAGGACAATTTTAGGAAATTTAACTCACCGGTGC +
Preference number: 5 (lower is better)
Translates to: HTAFYQEPGKMYFIC*QEVRTILGNLTHRC
Trigger: GCACCGGTGAGTTAAATTTCCTAAAATTGTCCTAACCTCTTGGCAACAAATAAAGTACATCTTTCCCGGTTCTTGGTAGAATGCTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549539.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGATTCAGCAGCCTCTTaGACAGGTGGGAATTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLDSAAS*TGGNFF
Trigger: GAAGAAATTCCCACCTGTCAAAGAGGCTGCTGAATC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TTGGAAGAGGGCATTTACCACTTAATCTTTCATCCTCTATATAGCGATGTAGTAGTGATCTTCGGTTCCTaGGTTCCACAACCCATTAAA +
Preference number: 5 (lower is better)
Translates to: LEEGIYHLIFHPLYSDVVVIFGS*VPQPIK
Trigger: TTTAATGGGTTGTGGAACCAAGGAACCGAAGATCAC...TACTACATCGCTATATAGAGGATGAAAGATTAAGTGGTAAATGCCCTCTTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAACAACAGTAACAACTaGTCGCACTGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLNNSNN*SHCSSS
Trigger: GCTGCTGCTACAGTGCGACAAGTTGTTACTGTTGTT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAATCTTTAGCACAAGGTTaGAGGGTACTGACAGATCTT +
Preference number: 5 (lower is better)
Translates to: SLKGTSASLSAEQTSEEESLAQG*RVLTDL
Trigger: AAGATCTGTCAGTACCCTCAAACCTTGTGCTAAAGA...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCACAGAATCTGTGTATaGATTCCACCGCAACAGCTC +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLHRICV*IPPQQL
Trigger: GAGCTGTTGCGGTGGAATCAATACACAGATTCTGTG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGTTCTGTCGACTGTGTaGGTGAAGAACCTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLVLSTV*VKNLLQ
Trigger: CTGAAGAAGGTTCTTCACCAACACAGTCGACAGAAC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGACCATTTGGTCTGATGTaGACTGTAAATCCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGPFGLM*TVNPAV
Trigger: AACAGCAGGATTTACAGTCAACATCAGACCAAATGG...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCTATCAAGGATTCTCCTaGATCATTTCTGATTGCTCC +
Preference number: 5 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCYQGFS*IISDCS
Trigger: GGAGCAATCAGAAATGATCAAGGAGAATCCTTGATA...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAAGGCAAGTACAAGGCATaGTTGGTAGAAAATCTGTCA +
Preference number: 5 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEGKYKA*LVENLS
Trigger: TGACAGATTTTCTACCAACAATGCCTTGTACTTGCC...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTGTAGAAAACAGAGTTaGCCCTGCACTCTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLCRKQS*PCTLPD
Trigger: GTCAGGAAGAGTGCAGGGCAAACTCTGTTTTCTACA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp GTTAATCCTGCTTTAATAAGAGAAGTTAAAGCTTCTGCTCCCCATTCTCTCATTGACTCAATCTTTTCTTaGTCTGCAGTGGTAGAGGAC +
Preference number: 5 (lower is better)
Translates to: VNPALIREVKASAPHSLIDSIFS*SAVVED
Trigger: GTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTC...AATGAGAGAATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGAAATATCTTCTAGTGTaGAAGATCCTTGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: RFSILNSGCWWLHEILKRKYLLV*KILATP
Trigger: TGGAGTAGCAAGGATCTTCAACACTAGAAGATATTT...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGACAGCTTCCTGTAAACTaGTCAAAACTGCTTCGGTAT +
Preference number: 5 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGQLPVN*SKLLRY
Trigger: ATACCGAAGCAGTTTTGACAAGTTTACAGGAAGCTG...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp AGATTCTCCATTTTGAACTCTGGATGCTGGTGGCTGCATGAAATCCTTAAAAGGAAATCTTCAAAAGTATaGGCTAGTTCTGGCCACATA +
Preference number: 5 (lower is better)
Translates to: RFSILNSGCWWLHEILKRKSSKV*ASSGHI
Trigger: TATGTGGCCAGAACTAGCCAATACTTTTGAAGATTT...CCTTTTAAGGATTTCATGCAGCCACCAGCATCCAGAGTTCAAAATGGAGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp CTATCTTCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTTCATTCAGGAGCCTTaGTTGATGTGCAAGCCTGTA +
Preference number: 5 (lower is better)
Translates to: LSSCFQIYCSRSRFSILNFIQEP*LMCKPV
Trigger: TACAGGCTTGCACATCAACAAAGGCTCCTGAATGAA...GTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGAAGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGACCTACAGCAGTCTCTaGAAAACTTGGTTGCCCATC +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLTYSSL*KTWLPI
Trigger: GATGGGCAACCAAGTTTTCAAGAGACTGCTGTAGGT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAATTTTCTGGCCATTCTaGAATGATGTGTGCCAAATG +
Preference number: 5 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRIFWPF*NDVCQM
Trigger: CATTTGGCACACATCATTCAAGAATGGCCAGAAAAT...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGATCTGTTACTATTTCCTaGTACCAGTACTGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGSVTIS*YQYWLF
Trigger: GAACAACCAGTACTGGTACAAGGAAATAGTAACAGA...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAATACACTGGATATTTTaGGAAGTCAGCATTACTGTC +
Preference number: 5 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRIHWIF*EVSITV
Trigger: GACAGTAATGCTGACTTCCAAAAATATCCAGTGTAT...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAATATCAAGGATTCTCCTaGATCATTTCTGATTGCTCC +
Preference number: 5 (lower is better)
Translates to: SLKGTSASLSAEQTSEEEYQGFS*IISDCS
Trigger: GGAGCAATCAGAAATGATCAAGGAGAATCCTTGATA...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAAAACATCTACAACTATTaGCAGGCAAGTACAAGGCAT +
Preference number: 5 (lower is better)
Translates to: SLKGTSASLSAEQTSEEENIYNY*QASTRH
Trigger: ATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTT...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGAAACATCTACAACTATTaGCAGGCAAGTACAAGGCAT +
Preference number: 5 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGNIYNY*QASTRH
Trigger: ATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTT...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGACTCAATCTTTTCTTaGTCTGCAGTGGTAGAGGAC +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLDSIFS*SAVVED
Trigger: GTCCTCTACCACTGCAGACAAAGAAAAGATTGAGTC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGAAAATATCTTCTAGTGTaGAAGATCCTTGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRKYLLV*KILATP
Trigger: TGGAGTAGCAAGGATCTTCAACACTAGAAGATATTT...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp CATAGGACTGACAAAATGACCTTAATAGTTGAGGCTGCACACAGAATCTGTGTAAAATATCTTCTAGTGTaGAAGATCCTTGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: HRTDKMTLIVEAAHRICVKYLLV*KILATP
Trigger: TGGAGTAGCAAGGATCTTCAACACTAGAAGATATTT...TACACAGATTCTGTGTGCAGCCTCAACTATTAAGGTCATTTTGTCAGTCCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp ATCTTCCTAGTTTTTCTCCAATGGAATCTGTTCTTACAAATGGCCTGCTCATGCTATGACTCCCAACTTTaGCAAGTCATCCATATTGAA +
Preference number: 5 (lower is better)
Translates to: IFLVFLQWNLFLQMACSCYDSQL*QVIHIE
Trigger: TTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA...GCATGAGCAGGCCATTTGTAAGAACAGATTCCATTGGAGAAAAACTAGGAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCCTGCTTTCAAATATATTGTAGCCGGTCAAGATTCTCCATTTTGAACTCTGGACTCATTGCTGATAAGTaGAACTACCTCGACATCAAT +
Preference number: 5 (lower is better)
Translates to: SCFQIYCSRSRFSILNSGLIADK*NYLDIN
Trigger: ATTGATGTCGAGGTAGTTCAACTTATCAGCAATGAG...TCCAGAGTTCAAAATGGAGAATCTTGACCGGCTACAATATATTTGAAAGCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTAATTTCTGTTACTTGTaGCCTTGGAAGAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: STKVGYKAITCAQVFPSTNFCYL*PWKRAF
Trigger: AAATGCCCTCTTCCAAGGCAACAAGTAACAGAAATT...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR CAA 90 bp GATATGAGAACTATAAGATTCCGGGTCTTCCATCAAAGACTGCTTTGCAACAGACTTTGCAAGGCTACTTaGAGGATTAAAGGGAATAAT +
Preference number: 5 (lower is better)
Translates to: DMRTIRFRVFHQRLLCNRLCKAT*RIKGNN
Trigger: ATTATTCCCTTTAATCCTCAAAGTAGCCTTGCAAAG...TCTGTTGCAAAGCAGTCTTTGATGGAAGACCCGGAATCTTATAGTTCTCATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp TCCTTAAAAGGAACTAGTGCCTCTTTAAGTGCAGAACAGACTTCTGAAGAAGAATTGTACCAGTACTGGTaGTTCTATAATATCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SLKGTSASLSAEQTSEEELYQYW*FYNISV
Trigger: CACAGAGATATTATAGAACAACCAGTACTGGTACAA...TTCTTCTTCAGAAGTCTGTTCTGCACTTAAAGAGGCACTAGTTCCTTTTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546600.5
ENST00000547095.5
CDS-3UTR CAA 90 bp GATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTTTCATATCTGTTACTATTTCCTaGTACCAGTACTGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: DPSAFTISRKTLVECCFISVTIS*YQYWLF
Trigger: GAACAACCAGTACTGGTACAAGGAAATAGTAACAGA...TATGAAACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGACCTGCGGAAAATCATaGAGGACTGACTCAAGTAAT +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLTCGKS*RTDSSN
Trigger: ATTACTTGAGTCAGTCCTCAATGATTTTCCGCAGGT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp ATTTCCTTGTACCAGTACTGGTTGTTCTATAATATCTCTGTGTCGTTCATCTTCATTATTGTTTCCAGCTaGGTTGCTTGTTGCAGGATT +
Preference number: 5 (lower is better)
Translates to: ISLYQYWLFYNISVSFIFIIVSS*VACCRI
Trigger: AATCCTGCAACAAGCAACCAAGCTGGAAACAATAAT...GAAGATGAACGACACAGAGATATTATAGAACAACCAGTACTGGTACAAGGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCCATTTGGTCTGATGTaGACTGTAAATCCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLPFGLM*TVNPAV
Trigger: AACAGCAGGATTTACAGTCAACATCAGACCAAATGG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTATATCAAGGATTCTCCTaGATCATTTCTGATTGCTCC +
Preference number: 5 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVYQGFS*IISDCS
Trigger: GGAGCAATCAGAAATGATCAAGGAGAATCCTTGATA...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp GCAACATCTACAACTATTTGCAGGCAAGTACAAGGCATTGTTGGTAGAAAATCTAAGTACAAGGCATTGTaGGTAGAAAATCTGTCACAA +
Preference number: 5 (lower is better)
Translates to: ATSTTICRQVQGIVGRKSKYKAL*VENLSQ
Trigger: TTGTGACAGATTTTCTACCAACAATGCCTTGTACTT...AGATTTTCTACCAACAATGCCTTGTACTTGCCTGCAAATAGTTGTAGATGTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCTACTAAAGTTGGGTATAAGGCAATTACTTGTGCCCAGGTATTTCCATCAACTTATGACTCCCAACTTTaGCAAGTCATCCATATTGAA +
Preference number: 5 (lower is better)
Translates to: STKVGYKAITCAQVFPSTYDSQL*QVIHIE
Trigger: TTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA...AGTTGATGGAAATACCTGGGCACAAGTAATTGCCTTATACCCAACTTTAGTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546600.5
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCAGCTTCCTGTAAACTaGTCAAAACTGCTTCGGTAT +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLQLPVN*SKLLRY
Trigger: ATACCGAAGCAGTTTTGACAAGTTTACAGGAAGCTG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp ATAAAAGATCCCAGTGCATTTACAATATCACGAAAAACCTTGGTAGAATGCTGTCATTTGCAATGTGCTTaGTTTCCAGCTGTCCATACT +
Preference number: 5 (lower is better)
Translates to: IKDPSAFTISRKTLVECCHLQCA*FPAVHT
Trigger: AGTATGGACAGCTGGAAACAAAGCACATTGCAAATG...ACAGCATTCTACCAAGGTTTTTCGTGATATTGTAAATGCACTGGGATCTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTACTCATTGCTGATAAGTaGAACTACCTCGACATCAAT +
Preference number: 5 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVLIADK*NYLDIN
Trigger: ATTGATGTCGAGGTAGTTCAACTTATCAGCAATGAG...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp GTTAATCCTGCTTTAATAAGAGAAGTTAAAGCTTCTGCTCCCCATTCTCTCATTCTCATTGCTGATAAGTaGAACTACCTCGACATCAAT +
Preference number: 5 (lower is better)
Translates to: VNPALIREVKASAPHSLILIADK*NYLDIN
Trigger: ATTGATGTCGAGGTAGTTCAACTTATCAGCAATGAG...AATGAGAGAATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTAAATTTCTGTTACTTGTaGCCTTGGAAGAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVNFCYL*PWKRAF
Trigger: AAATGCCCTCTTCCAAGGCAACAAGTAACAGAAATT...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGATTCAGGAGCCTTTGTaGATGTGCAAGCCTGTAATA +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLIQEPL*MCKPVI
Trigger: TATTACAGGCTTGCACATCAACAAAGGCTCCTGAAT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGATCGGTACACTACCCTaGGGTTATTCTGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLIGTLP*GYSVSM
Trigger: CATTGAAACAGAATAACCCAAGGGTAGTGTACCGAT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCACTATGTTTATGTTTaGAACTGTAGGGCATGGTCC +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLHYVYV*NCRAWS
Trigger: GGACCATGCCCTACAGTTCAAAACATAAACATAGTG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp TCAAGTATATTTGTCCCAGTGCCCATCATAGAAATAGTAATTGCCTCAAGAGTATGCCTTTTGTTTGTTTaGGAACCTAAAAGGCTCCTA +
Preference number: 5 (lower is better)
Translates to: SSIFVPVPIIEIVIASRVCLLFV*EPKRLL
Trigger: TAGGAGCCTTTTAGGTTCCAAAACAAACAAAAGGCA...TACTCTTGAGGCAATTACTATTTCTATGATGGGCACTGGGACAAATATACTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS TCA 90 bp CCAGAACTTCTGCCAAAGGATAACAGAAAATTAAATCAACGAGGTTaGAACAAAAGCATTTCAGTAACATCTTCAGTCTACCCACCTTTA +
Preference number: 5 (lower is better)
Translates to: PELLPKDNRKLNQRG*NKSISVTSSVYPPL
Trigger: TAAAGGTGGGTAGACTGAAGATGTTACTGAAATGCTTTTGTTTCAACCTCGTTGATTTAATTTTCTGTTATCCTTTGGCAGAAGTTCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551307.5
CDS CCA 90 bp TTTACAGGAAAATTCTACAAATGCCAACAACTGGTCAAATATAGCTaGATACATTATCTGCATGTTTTCTGGTCCTACACAAATGGCCTA +
Preference number: 5 (lower is better)
Translates to: FTGKFYKCQQLVKYS*IHYLHVFWSYTNGL
Trigger: TAGGCCATTTGTGTAGGACCAGAAAACATGCAGATAATGTATCCAGCTATATTTGACCAGTTGTTGGCATTTGTAGAATTTTCCTGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547287.1
CDS-3UTR CAA 90 bp GTTAATCCTGCTTTAATAAGAGAAGTTAAAGCTTCTGCTCCCCATTCTCTCATTTTGTACCAGTACTGGTaGTTCTATAATATCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VNPALIREVKASAPHSLILYQYW*FYNISV
Trigger: CACAGAGATATTATAGAACAACCAGTACTGGTACAA...AATGAGAGAATGGGGAGCAGAAGCTTTAACTTCTCTTATTAAAGCAGGATTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTCTGTTACTATTTCCTaGTACCAGTACTGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLSVTIS*YQYWLF
Trigger: GAACAACCAGTACTGGTACAAGGAAATAGTAACAGA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGGGACATACCCTTTCTTaGAGGAGGAAACTAAATTCT +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLGHTLS*RRKLNS
Trigger: AGAATTTAGTTTCCTCCTCAAAGAAAGGGTATGTCC...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGACTAATATTGAGTTCTaGGTTATGGAGGCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLTNIEF*VMEAKA
Trigger: AGCTTTGGCCTCCATAACCAAGAACTCAATATTAGT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAATTTCTGTTACTTGTaGCCTTGGAAGAGGGCATTT +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLNFCYL*PWKRAF
Trigger: AAATGCCCTCTTCCAAGGCAACAAGTAACAGAAATT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTGCCTTTTGTTTGTTTaGGAACCTAAAAGGCTCCTA +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLCLLFV*EPKRLL
Trigger: TAGGAGCCTTTTAGGTTCCAAAACAAACAAAAGGCA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTTGTACCAGTACTGGTaGTTCTATAATATCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLLYQYW*FYNISV
Trigger: CACAGAGATATTATAGAACAACCAGTACTGGTACAA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGATACACTGGATATTTTaGGAAGTCAGCATTACTGTC +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLIHWIF*EVSITV
Trigger: GACAGTAATGCTGACTTCCAAAAATATCCAGTGTAT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGTATGACTCCCAACTTTaGCAAGTCATCCATATTGAA +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLYDSQL*QVIHIE
Trigger: TTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393630.8
ENST00000546600.5
ENST00000641654.1
CDS-3UTR CAA 90 bp TATGACTCCCAACTTTTGCAAGTCATCCATATTGAAACCAGTTTTTATGTGTTGAAATCTTCAAAAGTATaGGCTAGTTCTGGCCACATA +
Preference number: 5 (lower is better)
Translates to: YDSQLLQVIHIETSFYVLKSSKV*ASSGHI
Trigger: TATGTGGCCAGAACTAGCCAATACTTTTGAAGATTT...CAACACATAAAAACTGGTTTCAATATGGATGACTTGCAAAAGTTGGGAGTCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547095.5
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGCAAATCATAAACTATTaGCTGCTGTGTTCACATGAC +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLQIINY*LLCSHD
Trigger: GTCATGTGAACACAGCAGCAAATAGTTTATGATTTG...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393630.8
ENST00000641654.1
CDS-3UTR CAA 90 bp TCATTAACACATACACCACAAACTGTACATAAGCTCACTTTAAATCACCAACTGAAAAATTGGTCCCTATaGTGGGAAGACATGGATTTT +
Preference number: 5 (lower is better)
Translates to: SLTHTPQTVHKLTLNHQLKNWSL*WEDMDF
Trigger: AAAATCCATGTCTTCCCACAATAGGGACCAATTTTT...CAGTTGGTGATTTAAAGTGAGCTTATGTACAGTTTGTGGTGTATGTGTTAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393630.8
CDS GCA 72 bp CCCGCTTCTTGGGCCCTGGGCTGCGAACCCGGAGCCTaGTCGAGCGTCCCCCAGCAGCTTCCCCGCAACACC +
Preference number: 6 (lower is better)
Translates to: PASWALGCEPGA*SSVPQQLPRNT
Trigger: GGTGTTGCGGGGAAGCTGCTGGGGGACGCTCGAGCAGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CCA 72 bp CCGCAGTCGCACCGTCCCGCTAGGCTCCGCCGACTCTaGCCGAGAAACCCACAAGGCGGGCAGGTCCCTCCG +
Preference number: 6 (lower is better)
Translates to: PQSHRPARLRRL*PRNPQGGQVPP
Trigger: CGGAGGGACCTGCCCGCCTTGTGGGTTTCTCGGCCAGAGTCGGCGGAGCCTAGCGGGACGGTGCGACTGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CAA 90 bp AGGCAGCTCCCTCCCGGTGTCTCTGGTCCTTCAGCAGCCCGCTTCTaGGGCCCTGGGCTGCGAACCCGGAGCCTGCTCGAGCGTCCCCCA +
Preference number: 6 (lower is better)
Translates to: RQLPPGVSGPSAARF*GPGLRTRSLLERPP
Trigger: TGGGGGACGCTCGAGCAGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGGGAGCTGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CAA 72 bp CCTCCCGGTGTCTCTGGTCCTTCAGCAGCCCGCTTCTaGGGCCCTGGGCTGCGAACCCGGAGCCTGCTCGAG +
Preference number: 6 (lower is better)
Translates to: PPGVSGPSAARF*GPGLRTRSLLE
Trigger: CTCGAGCAGGCTCCGGGTTCGCAGCCCAGGGCCCAAGAAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CCA 72 bp TCCTTAGGGCCACAGGCAGCTCCCTCCCGGTGTCTCTaGTCCTTCAGCAGCCCGCTTCTTGGGCCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SLGPQAAPSRCL*SFSSPLLGPWA
Trigger: AGCCCAGGGCCCAAGAAGCGGGCTGCTGAAGGACCAGAGACACCGGGAGGGAGCTGCCTGTGGCCCTAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549286.1
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS TCA 72 bp GCTTCTTCACCGCCTCGGGGCTGCTGGTGCCGGACATaGTCCTCCAAGGTCCCAGCCAATTTCCGAGAGGTA +
Preference number: 6 (lower is better)
Translates to: ASSPPRGCWCRT*SSKVPANFREV
Trigger: TACCTCTCGGAAATTGGCTGGGACCTTGGAGGATCATGTCCGGCACCAGCAGCCCCGAGGCGGTGAAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549286.1
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CCA 72 bp GGTCCCAGCCAATTTCCGAGAGGTACAAACAAGCTCTaGCACGGTCAGCTCCTTAGGGCCACAGGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GPSQFPRGTNKL*HGQLLRATGSS
Trigger: GGAGCTGCCTGTGGCCCTAAGGAGCTGACCGTGCCAGAGCTTGTTTGTACCTCTCGGAAATTGGCTGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549286.1
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS TCA 72 bp CTCTTTGACAGGTGGGAATTTCTTCTTGCACTCCAGTaGCAAGGCGCGCAAGTCGCTCTGCATATTCTCCAG +
Preference number: 6 (lower is better)
Translates to: LFDRWEFLLALQ*QGAQVALHILQ
Trigger: CTGGAGAATATGCAGAGCGACTTGCGCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACCTGTCAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000547095.5
ENST00000549286.1
ENST00000549378.5
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CAA 90 bp ATTATTCCTGATTCAGCAGCCTCTTTGACAGGTGGGAATTTCTTCTaGCACTCCAGTGACAAGGCGCGCAAGTCGCTCTGCATATTCTCC +
Preference number: 6 (lower is better)
Translates to: IIPDSAASLTGGNFF*HSSDKARKSLCIFS
Trigger: GGAGAATATGCAGAGCGACTTGCGCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACCTGTCAAAGAGGCTGCTGAATCAGGAATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393629.6
ENST00000393630.8
ENST00000546600.5
ENST00000549286.1
ENST00000552115.5
ENST00000552738.5
ENST00000641654.1
CDS CAA 90 bp CGAAAACAAAGAACGATTGCCTCTTTGACAGGTGGGAATTTCTTCTaGCACTCCAGTGACAAGGCGCGCAAGTCGCTCTGCATATTCTCC +
Preference number: 6 (lower is better)
Translates to: RKQRTIASLTGGNFF*HSSDKARKSLCIFS
Trigger: GGAGAATATGCAGAGCGACTTGCGCGCCTTGTCACTGGAGTGCAAGAAGAAATTCCCACCTGTCAAAGAGGCAATCGTTCTTTGTTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549378.5
CDS CAA 72 bp TTAAAGCTTCTGCTCCCCATTCTCTCATTCGAGAGTTaGGATGCTGGCAGACCTTCTCAAGTAGATGGCCAG +
Preference number: 6 (lower is better)
Translates to: LKLLLPILSFES*DAGRPSQVDGQ
Trigger: CTGGCCATCTACTTGAGAAGGTCTGCCAGCATCCAAACTCTCGAATGAGAGAATGGGGAGCAGAAGCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641654.1
CDS TCA 72 bp ACGACAATTCCTATGCTGGCTTCAGACAACAGGCAATaGCTCTGCTTCACACATTATGAATACTCTATAAAC +
Preference number: 6 (lower is better)
Translates to: TTIPMLASDNRQ*LCFTHYEYSIN
Trigger: GTTTATAGAGTATTCATAATGTGTGAAGCAGAGTCATTGCCTGTTGTCTGAAGCCAGCATAGGAATTGTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549378.5
CDS TCA 72 bp CTGCCAAAGGATAACAGAAAATTAAATCAACGAGGTTaGAACAAAAGCATTTCAGTAACATCTTCAGTCTAC +
Preference number: 6 (lower is better)
Translates to: LPKDNRKLNQRG*NKSISVTSSVY
Trigger: GTAGACTGAAGATGTTACTGAAATGCTTTTGTTTCAACCTCGTTGATTTAATTTTCTGTTATCCTTTGGCAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551307.5