RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MOGAT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166391

Ensembl transcript IDs: ENST00000198801.10, ENST00000525093.5, ENST00000526712.1, ENST00000624180.1

Found 433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTaGCCAGCAATGGCCCCCACACATGAGTCTTCCTGGTTCAGGAAC +
Preference number: 1 (lower is better)
Translates to: SWLLPCRVTRPVRAP*PAMAPTHESSWFRN
Trigger: GTTCCTGAACCAGGAAGACTCATGTGTGGGGGCCATTGCTGGTCAAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR TCA 90 bp GGTGGAGGCCTGGGTTATCTCCCAGACCTTCACAGCCCCATTCTCTaGCCTTGGGCAGGTCCCTTGCAGGGCCACAACTTCCCAGTTGCA +
Preference number: 1 (lower is better)
Translates to: GGGLGYLPDLHSPIL*PWAGPLQGHNFPVA
Trigger: TGCAACTGGGAAGTTGTGGCCCTGCAAGGGACCTGCCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGATAACCCAGGCCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR GCA 90 bp CATGAGGGATCAACAGGGGAGAGCGAGAGGGAGATAGGGCAGCGATaGAAAGCTGAGCTGGGATCCTCGGGACACACAGTGGTGGTACCA +
Preference number: 1 (lower is better)
Translates to: HEGSTGESEREIGQR*KAELGSSGHTVVVP
Trigger: TGGTACCACCACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCTCTCGCTCTCCCCTGTTGATCCCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR GCA 90 bp CACTCTGCCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATaGCTGGACTGCAGCCACAGGCCCTCCTTCCCTCCAGCTTCTAGT +
Preference number: 1 (lower is better)
Translates to: HSACLCHSPFPRRPT*LDCSHRPSFPPASS
Trigger: ACTAGAAGCTGGAGGGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR GCA 90 bp GGGAGGCCCCAGAGAAGGCACGAGCTGAAAGGCCCTTTAGCTTCCTaGAGGGACTCAGTGACCAAGAAATGGAGCAGAGGTCAGCCACCT +
Preference number: 1 (lower is better)
Translates to: GRPQRRHELKGPLAS*RDSVTKKWSRGQPP
Trigger: AGGTGGCTGACCTCTGCTCCATTTCTTGGTCACTGAGTCCCTGCAGGAAGCTAAAGGGCCTTTCAGCTCGTGCCTTCTCTGGGGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR CCA 90 bp TCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTGACCAGCAATaGCCCCCACACATGAGTCTTCCTGGTTCAGGAACTGCTGCTTCC +
Preference number: 1 (lower is better)
Translates to: SLAGSPDLFVPLDQQ*PPHMSLPGSGTAAS
Trigger: GGAAGCAGCAGTTCCTGAACCAGGAAGACTCATGTGTGGGGGCCATTGCTGGTCAAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 90 bp AAGAAATGGAGCAGAGGTCAGCCACCTGGGCTGGAGGTGGAGGCCTaGGTTATCTCCCAGACCTTCACAGCCCCATTCTCTGACCTTGGG +
Preference number: 1 (lower is better)
Translates to: KKWSRGQPPGLEVEA*VISQTFTAPFSDLG
Trigger: CCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGATAACCCAGGCCTCCACCTCCAGCCCAGGTGGCTGACCTCTGCTCCATTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR CCA 90 bp CTGAAAGGCCCTTTAGCTTCCTGCAGGGACTCAGTGACCAAGAAATaGAGCAGAGGTCAGCCACCTGGGCTGGAGGTGGAGGCCTGGGTT +
Preference number: 1 (lower is better)
Translates to: LKGPLASCRDSVTKK*SRGQPPGLEVEAWV
Trigger: AACCCAGGCCTCCACCTCCAGCCCAGGTGGCTGACCTCTGCTCCATTTCTTGGTCACTGAGTCCCTGCAGGAAGCTAAAGGGCCTTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR TCA 90 bp ATCAACAGGGGAGAGCGAGAGGGAGATAGGGCAGCGATGCAAAGCTaGGCTGGGATCCTCGGGACACACAGTGGTGGTACCATGGTCACA +
Preference number: 1 (lower is better)
Translates to: INRGEREGDRAAMQS*AGILGTHSGGTMVT
Trigger: TGTGACCATGGTACCACCACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCTCTCGCTCTCCCCTGTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR TCA 90 bp CCAGCTTCTAGTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTaGATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: PASSWAQAVGNLAAD*MEEGEVGMLAPGSS
Trigger: GGAGGAGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAACTAGAAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 90 bp CTTCTAGTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATaGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTCCTCCCTTG +
Preference number: 1 (lower is better)
Translates to: LLVGLRQWGTWQQTE*RKVKWECLLLAPPL
Trigger: CAAGGGAGGAGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAACTAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR TCA 90 bp CACCAGACCTGTTCGTGCCCCTTGACCAGCAATGGCCCCCACACATaGGTCTTCCTGGTTCAGGAACTGCTGCTTCCATTCATCCTTCCA +
Preference number: 1 (lower is better)
Translates to: HQTCSCPLTSNGPHT*VFLVQELLLPFILP
Trigger: TGGAAGGATGAATGGAAGCAGCAGTTCCTGAACCAGGAAGACTCATGTGTGGGGGCCATTGCTGGTCAAGGGGCACGAACAGGTCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR GCA 90 bp GAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTCTaGCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCT +
Preference number: 1 (lower is better)
Translates to: EVDMFRLPLTPPDPL*LSLPFSLSQEAYMP
Trigger: AGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR TCA 90 bp ACTGGAAGACACCACGGCCATGAAAGAGTGGGAGGGAGATGCCCATaGTCTTCTGCAACCGATTCTGGATATAGCGTAACCAGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: TGRHHGHERVGGRCP*SSATDSGYSVTRSQ
Trigger: CTGGCTCCTGGTTACGCTATATCCAGAATCGGTTGCAGAAGATCATGGGCATCTCCCTCCCACTCTTTCATGGCCGTGGTGTCTTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR CCA 90 bp AGTTTTATTTGTGAGACAGGATGCAGGTCCTGTTTGTGGGTAGGCTaGAGGGAGTGCACTAGAGGCAGGGGCATTGGCGCAGCATTTACC +
Preference number: 1 (lower is better)
Translates to: SFICETGCRSCLWVG*RECTRGRGIGAAFT
Trigger: GGTAAATGCTGCGCCAATGCCCCTGCCTCTAGTGCACTCCCTCCAGCCTACCCACAAACAGGACCTGCATCCTGTCTCACAAATAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 90 bp CAAGAGTTCAGTTTTATTTGTGAGACAGGATGCAGGTCCTGTTTGTaGGTAGGCTGGAGGGAGTGCACTAGAGGCAGGGGCATTGGCGCA +
Preference number: 1 (lower is better)
Translates to: QEFSFICETGCRSCL*VGWRECTRGRGIGA
Trigger: TGCGCCAATGCCCCTGCCTCTAGTGCACTCCCTCCAGCCTACCCACAAACAGGACCTGCATCCTGTCTCACAAATAAAACTGAACTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 90 bp CTGGTCTCCTCTTCTGCATTGCCTGCTCTGACTTACAGCCTGATATaGGTTGGATTTGCAGGAGTCTGGGAAGGCTCTGCAGATATGTTC +
Preference number: 1 (lower is better)
Translates to: LVSSSALPALTYSLI*VGFAGVWEGSADMF
Trigger: GAACATATCTGCAGAGCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGGCAATGCAGAAGAGGAGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 90 bp ACCCTCCTCAAATTATCCTCTGGTTCCTGCTGGATCCTGATCCTCTaGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGT +
Preference number: 1 (lower is better)
Translates to: TLLKLSSGSCWILIL*IQTGPNPILGAMEG
Trigger: ACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTTGAGGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 90 bp CTCCTCTTCTGCATTGCCTGCTCTGACTTACAGCCTGATATGGGTTaGATTTGCAGGAGTCTGGGAAGGCTCTGCAGATATGTTCAACAA +
Preference number: 1 (lower is better)
Translates to: LLFCIACSDLQPDMG*ICRSLGRLCRYVQQ
Trigger: TTGTTGAACATATCTGCAGAGCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGGCAATGCAGAAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 90 bp TCTGCAACCGATTCTGGATATAGCGTAACCAGGAGCCAGAAGAGTTaGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGAAGATTG +
Preference number: 1 (lower is better)
Translates to: SATDSGYSVTRSQKS*ESGQIGHSPRRRRL
Trigger: CAATCTTCTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTGGCTCCTGGTTACGCTATATCCAGAATCGGTTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR-3UTR TCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTTGTCCTAGCCCCAGCTaGCCCCTTGGTCTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTCPSPS*PLGLVS
Trigger: GGAGACCAGACCAAGGGGTCAGCTGGGGCTAGGACA...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGGGCCCAGTGTCCATGTaGAAAGAGAGGCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: REIGQRCKAELGSSGHTVGPVSM*KERPSP
Trigger: GGGGCTGGGCCTCTCTTTGCACATGGACACTGGGCC...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTCCCAGGAGGCCTACATaGCTGGACTGCAGCCACAGG +
Preference number: 2 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTPRRPT*LDCSHR
Trigger: CCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGG...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCTTCCAGGCCTCAGGGTaGAAACAGTGCACACACCTC +
Preference number: 2 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSFQASG*KQCTHL
Trigger: GAGGTGTGTGCACTGTTTCCACCCTGAGGCCTGGAA...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCGCTGTGGCTGTGCATaGGGGATCAACAGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKRCGCA*GINRGE
Trigger: CTCTCCCCTGTTGATCCCTCATGCACAGCCACAGCG...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGCCCCAGCTGACCCCTTaGTCTGGTCTCCTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: REIGQRCKAELGSSGHTVPQLTP*SGLLFC
Trigger: GCAGAAGAGGAGACCAGACCAAGGGGTCAGCTGGGG...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTGGGAATGCTTGCTCCTaGCTCCTCCCTTGCAGGGTC +
Preference number: 2 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTGNACS*LLPCRV
Trigger: GACCCTGCAAGGGAGGAGCCAGGAGCAAGCATTCCC...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CAA 90 bp AGGCCTGGGTTATCTCCCAGACCTTCACAGCCCCATTCTCTGACCTaGGGCAGGTCCCTTGCAGGGCCACAACTTCCCAGTTGCACCATG +
Preference number: 2 (lower is better)
Translates to: RPGLSPRPSQPHSLT*GRSLAGPQLPSCTM
Trigger: CATGGTGCAACTGGGAAGTTGTGGCCCTGCAAGGGACCTGCCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGATAACCCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR-3UTR TCA 90 bp AAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACCCTGTTCGTGCCCCTTaGCCAGCAATGGCCCCCACA +
Preference number: 2 (lower is better)
Translates to: KVWRSQRKPLSTRGTGEDPVRAP*PAMAPT
Trigger: TGTGGGGGCCATTGCTGGTCAAGGGGCACGAACAGG...GTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTCACCAGACCTGTTCGTaGCCCTTGACCAGCAATGGC +
Preference number: 2 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTHQTCS*PLTSNG
Trigger: GCCATTGCTGGTCAAGGGGCACGAACAGGTCTGGTG...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGTCCTGGCTCCTCCCTTaGAGGGTCACCAGACCTGTT +
Preference number: 2 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKSWLLP*RVTRPV
Trigger: AACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGA...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CAA 90 bp GGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTaGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGC +
Preference number: 2 (lower is better)
Translates to: GTWQQTEWRKVKWEC*LLAPPLQGHQTCSC
Trigger: GCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp AAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACGCAGCGATGCAAAGCTaGGCTGGGATCCTCGGGACA +
Preference number: 2 (lower is better)
Translates to: KVWRSQRKPLSTRGTGEDAAMQS*AGILGT
Trigger: TGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGC...GTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp AGAGATGAGGATGGACAGGCTGGGCCAGATGCTGGAGAGTGGCAAACGGCAGGCCTGAATGGAGGAAGGTaGAGTGGGAATGCTTGCTCC +
Preference number: 2 (lower is better)
Translates to: RDEDGQAGPDAGEWQTAGLNGGR*SGNACS
Trigger: GGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAG...GCCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGTCCATCCTCATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCTGGTTCAGGAACTGCTaGTTCCATTCATCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSWFRNC*FHSSFQ
Trigger: CTGGAAGGATGAATGGAAGCAGCAGTTCCTGAACCA...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCCCTACATGCCTGGACTaGAGCCACAGGCCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCPTCLD*SHRPSF
Trigger: GAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGG...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp AAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACCCCCAGCTGACCCCTTaGTCTGGTCTCCTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: KVWRSQRKPLSTRGTGEDPQLTP*SGLLFC
Trigger: GCAGAAGAGGAGACCAGACCAAGGGGTCAGCTGGGG...GTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCGAGTCCGTGCAGCTTTaGCTCTCATCTTTTGGAATC +
Preference number: 2 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSESVQL*LSSFGI
Trigger: GATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTC...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGGATGCAAAGCTGAGCTaGGATCCTCGGGACACACAG +
Preference number: 2 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKDAKLS*DPRDTQ
Trigger: CTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATC...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCCCTTGACCAGCAATaGCCCCCACACATGAGTCTT +
Preference number: 2 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKPLDQQ*PPHMSL
Trigger: AAGACTCATGTGTGGGGGCCATTGCTGGTCAAGGGG...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CACTCTGCCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACGTTGGGCTCAGGCAGTaGGGAACTTGGCAGCAGACT +
Preference number: 2 (lower is better)
Translates to: HSACLCHSPFPRRPTCLDVGLRQ*GTWQQT
Trigger: AGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC...GTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp AAGGAGAAGATTGGCACCAGGGGTGCCCTGGAGACAAATAGAGGAAAGAGGGCACACCTGGGCTGGAGGTaGAGGCCTGGGTTATCTCCC +
Preference number: 2 (lower is better)
Translates to: KEKIGTRGALETNRGKRAHLGWR*RPGLSP
Trigger: GGGAGATAACCCAGGCCTCCACCTCCAGCCCAGGTG...TGCCCTCTTTCCTCTATTTGTCTCCAGGGCACCCCTGGTGCCAATCTTCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR CAA 90 bp AGGCTGAGAAGCTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTaGACCCCTCCAGATCCACTCTGCCTGTCTTTGCCATTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: RLRSSGLEVDMFRLP*TPPDPLCLSLPFSL
Trigger: AAGGGAGAATGGCAAAGACAGGCAGAGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAGCTTCTCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGGCTGACCCCTTGGTCTaGTCTCCTCTTCTGCATTGC +
Preference number: 2 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVADPLV*SPLLHC
Trigger: GCAATGCAGAAGAGGAGACCAGACCAAGGGGTCAGC...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGTGGAGGAAGGTGAAGTaGGAATGCTTGCTCCTGGCT +
Preference number: 2 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKWRKVK*ECLLLA
Trigger: AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCA...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACGCTCGGGCCTGGAAGTaGACATGTTCCGTCTTCCGT +
Preference number: 2 (lower is better)
Translates to: GCGGGTESLEKPEETPVNARAWK*TCSVFR
Trigger: ACGGAAGACGGAACATGTCCACTTCCAGGCCCGAGC...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCACGCTGTGGCTGTGCATaGGGGATCAACAGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSRCGCA*GINRGE
Trigger: CTCTCCCCTGTTGATCCCTCATGCACAGCCACAGCG...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp CAGGAGCCAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGCACAGCCCCATTCTCTaGCCTTGGGCAGGTCCCTTG +
Preference number: 2 (lower is better)
Translates to: QEPEELGIWSNRSFSPKEHSPIL*PWAGPL
Trigger: CAAGGGACCTGCCCAAGGTCAGAGAATGGGGCTGTG...CTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTGGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR-3UTR GCA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCAGTCTGGGAAGGCTCTaGAGATATGTTCAACAAACA +
Preference number: 2 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSSLGRL*RYVQQT
Trigger: TGTTTGTTGAACATATCTGCAGAGCCTTCCCAGACT...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp TCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGGCCTGGGGTGGAGAGTaGTTGTGCTTCAGGCTTTTA +
Preference number: 2 (lower is better)
Translates to: SSGHTVVVPWSHREFQGVAWGGE*LCFRLL
Trigger: TAAAAGCCTGAAGCACAAGCACTCTCCACCCCAGGC...CACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp AGAGATGAGGATGGACAGGCTGGGCCAGATGCTGGAGAGTGGCAAACGGCAGGCTCCTGGTTCAGGAACTaGTGCTTCCATTCATCCTTC +
Preference number: 2 (lower is better)
Translates to: RDEDGQAGPDAGEWQTAGSWFRN*CFHSSF
Trigger: GAAGGATGAATGGAAGCAGCAGTTCCTGAACCAGGA...GCCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGTCCATCCTCATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTACAGTGGTGGTACCATaGTCACACAGGGAATTCCAG +
Preference number: 2 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTTVVVP*SHREFQ
Trigger: CTGGAATTCCCTGTGTGACCATGGTACCACCACTGT...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTCGGGACACACAGTGGTaGTACCATGGTCACACAGGG +
Preference number: 2 (lower is better)
Translates to: TWQQTEWRKVKWECLLLARDTQW*YHGHTG
Trigger: CCCTGTGTGACCATGGTACCACCACTGTGTGTCCCG...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCGTTCCTGCTGGATCCTaGTCCTCTGGATTCAGACTG +
Preference number: 2 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCVPAGS*SSGFRL
Trigger: CAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAAC...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGCTCTTCTGCATTGCCTaGTCTGACTTACAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: REIGQRCKAELGSSGHTVLFCIA*SDLQPD
Trigger: ATCAGGCTGTAAGTCAGAGCAGGCAATGCAGAAGAG...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGGGCAGTAAGAATCCCTaGATGTGTCCACACCCTTTT +
Preference number: 2 (lower is better)
Translates to: REIGQRCKAELGSSGHTVGSKNP*MCPHPF
Trigger: AAAAGGGTGTGGACACATGCAGGGATTCTTACTGCC...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGGGCAGTAAGAATCCCTaGATGTGTCCACACCCTTTT +
Preference number: 2 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKGSKNP*MCPHPF
Trigger: AAAAGGGTGTGGACACATGCAGGGATTCTTACTGCC...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTCCCCTTGACCAGCAATaGCCCCCACACATGAGTCTT +
Preference number: 2 (lower is better)
Translates to: TWQQTEWRKVKWECLLLAPLDQQ*PPHMSL
Trigger: AAGACTCATGTGTGGGGGCCATTGCTGGTCAAGGGG...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp AGGGTATTAAACCAAAGCTGTACTGGAAGACACCACGGCCATGAAAGAGTGGGAGTCAGCCACCTGGGCTaGAGGTGGAGGCCTGGGTTA +
Preference number: 2 (lower is better)
Translates to: RVLNQSCTGRHHGHERVGVSHLG*RWRPGL
Trigger: TAACCCAGGCCTCCACCTCCAGCCCAGGTGGCTGAC...TCCCACTCTTTCATGGCCGTGGTGTCTTCCAGTACAGCTTTGGTTTAATACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR-3UTR TCA 90 bp AAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACGAATCTGCTGGGTTGTaGCTTGCTTCGACCAACAGA +
Preference number: 2 (lower is better)
Translates to: KVWRSQRKPLSTRGTGEDESAGL*LASTNR
Trigger: TCTGTTGGTCGAAGCAAGTCACAACCCAGCAGATTC...GTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACGATATGGGTTGGATTTaGAGGAGTCTGGGAAGGCTC +
Preference number: 2 (lower is better)
Translates to: GCGGGTESLEKPEETPVNDMGWI*RSLGRL
Trigger: GAGCCTTCCCAGACTCCTGCAAATCCAACCCATATC...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACGGATTTGCAGGAGTCTaGGAAGGCTCTGCAGATATG +
Preference number: 2 (lower is better)
Translates to: GCGGGTESLEKPEETPVNGFAGV*EGSADM
Trigger: CATATCTGCAGAGCCTTCCCAGACTCCTGCAAATCC...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACACAGTGGTGGTACCATaGTCACACAGGGAATTCCAG +
Preference number: 2 (lower is better)
Translates to: GCGGGTESLEKPEETPVNTVVVP*SHREFQ
Trigger: CTGGAATTCCCTGTGTGACCATGGTACCACCACTGT...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTCCTCAAATTATCCTCTaGTTCCTGCTGGATCCTGAT +
Preference number: 2 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTPQIIL*FLLDPD
Trigger: ATCAGGATCCAGCAGGAACCAGAGGATAATTTGAGG...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCTCAAATTATCCTCTaGTTCCTGCTGGATCCTGAT +
Preference number: 2 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKPQIIL*FLLDPD
Trigger: ATCAGGATCCAGCAGGAACCAGAGGATAATTTGAGG...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CACTCTGCCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACACACATGAGTCTTCCTaGTTCAGGAACTGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: HSACLCHSPFPRRPTCLDTHESS*FRNCCF
Trigger: GAAGCAGCAGTTCCTGAACCAGGAAGACTCATGTGT...GTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACACACATGAGTCTTCCTaGTTCAGGAACTGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: CLCHSPFPRRPTCLDCSHTHESS*FRNCCF
Trigger: GAAGCAGCAGTTCCTGAACCAGGAAGACTCATGTGT...GTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAAGGCCCAGTGTCCATGTaGAAAGAGAGGCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQGPVSM*KERPSP
Trigger: GGGGCTGGGCCTCTCTTTGCACATGGACACTGGGCC...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTGGATTTGCAGGAGTCTaGGAAGGCTCTGCAGATATG +
Preference number: 2 (lower is better)
Translates to: TWQQTEWRKVKWECLLLAGFAGV*EGSADM
Trigger: CATATCTGCAGAGCCTTCCCAGACTCCTGCAAATCC...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGACTTACAGCCTGATATaGGTTGGATTTGCAGGAGTC +
Preference number: 2 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKTYSLI*VGFAGV
Trigger: GACTCCTGCAAATCCAACCCATATCAGGCTGTAAGT...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTTTGGCTCTCATCTTTTaGAATCAGCCACCAATGAAT +
Preference number: 2 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLLALIF*NQPPMN
Trigger: ATTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAA...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCGGATATGGCATTCCATaGCATCCAACATCATGGGCA +
Preference number: 2 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCGYGIP*HPTSWA
Trigger: TGCCCATGATGTTGGATGCCATGGAATGCCATATCC...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp GAGGTTGCACAGCTCTTTGATATAACGCTGGTGCAGCTGGTTCACCTCCTCCTCTCAGTGACCAAGAAATaGAGCAGAGGTCAGCCACCT +
Preference number: 2 (lower is better)
Translates to: EVAQLFDITLVQLVHLLLSVTKK*SRGQPP
Trigger: AGGTGGCTGACCTCTGCTCCATTTCTTGGTCACTGA...GAGGAGGAGGTGAACCAGCTGCACCAGCGTTATATCAAAGAGCTGTGCAACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR-3UTR CCA 90 bp GGATATAGCGTAACCAGGAGCCAGAAGAGTTGGGAATCTGGTCAAATAGGTCATCCCGAAGGAGAAGATTaGCACCAGGGGTGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: GYSVTRSQKSWESGQIGHPEGED*HQGCPG
Trigger: TCCAGGGCACCCCTGGTGCCAATCTTCTCCTTCGGG...ATGACCTATTTGACCAGATTCCCAACTCTTCTGGCTCCTGGTTACGCTATATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR CAA 90 bp TTTCAAGAGTTCAGTTTTATTTGTGAGACAGGATGCAGGTCCTGTTaGTGGGTAGGCTGGAGGGAGTGCACTAGAGGCAGGGGCATTGGC +
Preference number: 2 (lower is better)
Translates to: FQEFSFICETGCRSC*WVGWRECTRGRGIG
Trigger: GCCAATGCCCCTGCCTCTAGTGCACTCCCTCCAGCCTACCCACAAACAGGACCTGCATCCTGTCTCACAAATAAAACTGAACTCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp ATCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTCACCCTTTTGTAATATaGCATTGCTGCTCCTCCCAT +
Preference number: 2 (lower is better)
Translates to: ILGTHSGGTMVTQGIPGCHPFVI*HCCSSH
Trigger: ATGGGAGGAGCAGCAATGTCATATTACAAAAGGGTG...ACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp CAGGAGCCAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGTTCCCAGTTGCACCATaGGAGGTAGACCAGAATGCT +
Preference number: 2 (lower is better)
Translates to: QEPEELGIWSNRSFSPKEFPVAP*EVDQNA
Trigger: AGCATTCTGGTCTACCTCTCATGGTGCAACTGGGAA...CTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTGGCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR-3UTR GCA 90 bp CTAGGACTCGAGTCCGTGCAGCTTTGGCTCTCATCTTTTGGAATCAGCCACCAAGATATGGGTTGGATTTaGAGGAGTCTGGGAAGGCTC +
Preference number: 2 (lower is better)
Translates to: LGLESVQLWLSSFGISHQDMGWI*RSLGRL
Trigger: GAGCCTTCCCAGACTCCTGCAAATCCAACCCATATC...TTGGTGGCTGATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCGAGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp AAATTATCCTCTGGTTCCTGCTGGATCCTGATCCTCTGGATTCAGACTGGTCCAGAGATAGGGCAGCGATaGAAAGCTGAGCTGGGATCC +
Preference number: 2 (lower is better)
Translates to: KLSSGSCWILILWIQTGPEIGQR*KAELGS
Trigger: GGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTC...TGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACACTTACAGCCTGATATaGGTTGGATTTGCAGGAGTC +
Preference number: 2 (lower is better)
Translates to: GCGGGTESLEKPEETPVNTYSLI*VGFAGV
Trigger: GACTCCTGCAAATCCAACCCATATCAGGCTGTAAGT...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp TTATCCAGACAAGGGGGAGATAATGGGGAGGATATGGCATTCCATGGCATCCAACCTCGGGACACACAGTaGTGGTACCATGGTCACACA +
Preference number: 2 (lower is better)
Translates to: LSRQGGDNGEDMAFHGIQPRDTQ*WYHGHT
Trigger: TGTGTGACCATGGTACCACCACTGTGTGTCCCGAGG...TTGGATGCCATGGAATGCCATATCCTCCCCATTATCTCCCCCTTGTCTGGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp TTATCCAGACAAGGGGGAGATAATGGGGAGGATATGGCATTCCATGGCATCCAAAGGCAGTGGGGAACTTaGCAGCAGACTGAATGGAGG +
Preference number: 2 (lower is better)
Translates to: LSRQGGDNGEDMAFHGIQRQWGT*QQTEWR
Trigger: CCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCT...TTGGATGCCATGGAATGCCATATCCTCCCCATTATCTCCCCCTTGTCTGGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGTTTTGGTGGATTGTTTaGAAAGACGGCAGTAAGAAT +
Preference number: 2 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKFWWIV*KDGSKN
Trigger: ATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAA...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACGGTGGAGAGTGCTTGTaGTTCAGGCTTTTAGTTTTT +
Preference number: 2 (lower is better)
Translates to: GCGGGTESLEKPEETPVNGGECL*FRLLVF
Trigger: AAAAACTAAAAGCCTGAAGCACAAGCACTCTCCACC...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGGTTTTTAAGTTTTGGTaGATTGTTTGCAAAGACGGC +
Preference number: 2 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKVFKFW*IVCKDG
Trigger: GCCGTCTTTGCAAACAATCCACCAAAACTTAAAAAC...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp TTAGTTTTTAAGTTTTGGTGGATTGTTTGCAAAGACGGCAGTAAGAATCCCTGCTGTCCTAGCCCCAGCTaGCCCCTTGGTCTGGTCTCC +
Preference number: 2 (lower is better)
Translates to: LVFKFWWIVCKDGSKNPCCPSPS*PLGLVS
Trigger: GGAGACCAGACCAAGGGGTCAGCTGGGGCTAGGACA...GCAGGGATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAACTTAAAAACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCACTATTCCTTACTCCTTaGATCTGCTGGGTTGTGACT +
Preference number: 2 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSLFLTP*ICWVVT
Trigger: AGTCACAACCCAGCAGATTCAAGGAGTAAGGAATAG...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp GACTTGCTTCGACCAACAGAATGCAGTAGAAGAGATGCTTGTGAGGTGTGCAGCTCTGGTCTCCTCTTCTaGATTGCCTGCTCTGACTTA +
Preference number: 2 (lower is better)
Translates to: DLLRPTECSRRDACEVCSSGLLF*IACSDL
Trigger: TAAGTCAGAGCAGGCAATGCAGAAGAGGAGACCAGA...GCTGCACACCTCACAAGCATCTCTTCTACTGCATTCTGTTGGTCGAAGCAAGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp ACCGATTCTGGATATAGCGTAACCAGGAGCCAGAAGAGTTGGGAATCTGGTCAACATGTTTCTCAAGGATaGTTCACCCCAAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: TDSGYSVTRSQKSWESGQHVSQG*FTPRRE
Trigger: CTCCCTCCTTGGGGTGAAGCATCCTTGAGAAACATG...TTGACCAGATTCCCAACTCTTCTGGCTCCTGGTTACGCTATATCCAGAATCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR-3UTR CCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAAGATGCAAAGCTGAGCTaGGATCCTCGGGACACACAG +
Preference number: 2 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQDAKLS*DPRDTQ
Trigger: CTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATC...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp TTATCCAGACAAGGGGGAGATAATGGGGAGGATATGGCATTCCATGGCATCCAATCCTCTGGTTCCTGCTaGATCCTGATCCTCTGGATT +
Preference number: 2 (lower is better)
Translates to: LSRQGGDNGEDMAFHGIQSSGSC*ILILWI
Trigger: AATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGA...TTGGATGCCATGGAATGCCATATCCTCCCCATTATCTCCCCCTTGTCTGGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACGTGAGACAATATAGCTaGGACAAAGAAATGCAAATG +
Preference number: 2 (lower is better)
Translates to: GCGGGTESLEKPEETPVNVRQYS*DKEMQM
Trigger: CATTTGCATTTCTTTGTCTCAGCTATATTGTCTCAC...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp ATCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTTTTTGGTGGATTGTTTaGAAAGACGGCAGTAAGAAT +
Preference number: 2 (lower is better)
Translates to: ILGTHSGGTMVTQGIPGCFWWIV*KDGSKN
Trigger: ATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAA...ACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR TCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAAAACTTGGCAGCAGACTaGATGGAGGAAGGTGAAGTG +
Preference number: 2 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQNLAAD*MEEGEV
Trigger: CACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTT...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAATCCTCTGGTTCCTGCTaGATCCTGATCCTCTGGATT +
Preference number: 2 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQSSGSC*ILILWI
Trigger: AATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGA...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAACTCTTCTGCATTGCCTaGTCTGACTTACAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQLFCIA*SDLQPD
Trigger: ATCAGGCTGTAAGTCAGAGCAGGCAATGCAGAAGAG...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR GCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAATCTGGTCTCCTCTTCTaGATTGCCTGCTCTGACTTA +
Preference number: 2 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQSGLLF*IACSDL
Trigger: TAAGTCAGAGCAGGCAATGCAGAAGAGGAGACCAGA...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CCA 90 bp TTATCCAGACAAGGGGGAGATAATGGGGAGGATATGGCATTCCATGGCATCCAAGTTTTTAAGTTTTGGTaGATTGTTTGCAAAGACGGC +
Preference number: 2 (lower is better)
Translates to: LSRQGGDNGEDMAFHGIQVFKFW*IVCKDG
Trigger: GCCGTCTTTGCAAACAATCCACCAAAACTTAAAAAC...TTGGATGCCATGGAATGCCATATCCTCCCCATTATCTCCCCCTTGTCTGGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CAA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCACCTGTTCGTGCCCCTaGACCAGCAATGGCCCCCAC +
Preference number: 3 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSTCSCP*TSNGPH
Trigger: GTGGGGGCCATTGCTGGTCAAGGGGCACGAACAGGT...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR GCA 72 bp CGCTGGTGCAGCTGGTTCACCTCCTCCTCCGAGGGATaGAGCGTCTTCTGTACCTCGATGGGCTTCCCCACC +
Preference number: 3 (lower is better)
Translates to: RWCSWFTSSSEG*SVFCTSMGFPT
Trigger: GGTGGGGAAGCCCATCGAGGTACAGAAGACGCTGCATCCCTCGGAGGAGGAGGTGAACCAGCTGCACCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR TCA 72 bp GCTGGGCCAGATGCTGGAGAGTGGCAAACGGCAGGCTaGGAAGCTCGGGCCTGGAAGTGGACATGTTCCGTC +
Preference number: 3 (lower is better)
Translates to: AGPDAGEWQTAG*EARAWKWTCSV
Trigger: GACGGAACATGTCCACTTCCAGGCCCGAGCTTCTCAGCCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CAA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCATGGCGCGGTCAGCTTaGTGTTTTAGACAGCTCGCT +
Preference number: 3 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSMARSA*CFRQLA
Trigger: AGCGAGCTGTCTAAAACACAAAGCTGACCGCGCCAT...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR GCA 72 bp TCAACAGGGGAGAGCGAGAGGGAGATAGGGCAGCGATaGAAAGCTGAGCTGGGATCCTCGGGACACACAGTG +
Preference number: 3 (lower is better)
Translates to: STGESEREIGQR*KAELGSSGHTV
Trigger: CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCTCTCGCTCTCCCCTGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR GCA 72 bp CATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTaGAGCCACAGGCCCTCCTTCCCTCCAGCTTCTAGT +
Preference number: 3 (lower is better)
Translates to: HSPFPRRPTCLD*SHRPSFPPASS
Trigger: ACTAGAAGCTGGAGGGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR GCA 72 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATaGCTGGACTGCAGCCACAGGCCCTCCTTCCCTCCA +
Preference number: 3 (lower is better)
Translates to: CLCHSPFPRRPT*LDCSHRPSFPP
Trigger: TGGAGGGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CAA 90 bp ATCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGCCCCAGCTGACCCCTaGGTCTGGTCTCCTCTTCTG +
Preference number: 3 (lower is better)
Translates to: ILGTHSGGTMVTQGIPGCAPADP*VWSPLL
Trigger: CAGAAGAGGAGACCAGACCAAGGGGTCAGCTGGGGC...ACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CAA 90 bp AGAGATGAGGATGGACAGGCTGGGCCAGATGCTGGAGAGTGGCAAACGGCAGGCATGTTCCGTCTTCCGTaGACCCCTCCAGATCCACTC +
Preference number: 3 (lower is better)
Translates to: RDEDGQAGPDAGEWQTAGMFRLP*TPPDPL
Trigger: GAGTGGATCTGGAGGGGTCAACGGAAGACGGAACAT...GCCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGTCCATCCTCATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CAA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTGTCTCCTCTTCTGCATaGCCTGCTCTGACTTACAGC +
Preference number: 3 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLVSSSA*PALTYS
Trigger: GCTGTAAGTCAGAGCAGGCAATGCAGAAGAGGAGAC...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR TCA 72 bp CTGGGTTATCTCCCAGACCTTCACAGCCCCATTCTCTaGCCTTGGGCAGGTCCCTTGCAGGGCCACAACTTC +
Preference number: 3 (lower is better)
Translates to: LGYLPDLHSPIL*PWAGPLQGHNF
Trigger: GAAGTTGTGGCCCTGCAAGGGACCTGCCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGATAACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR GCA 72 bp TTCACAGCCCCATTCTCTGACCTTGGGCAGGTCCCTTaGAGGGCCACAACTTCCCAGTTGCACCATGAGAGG +
Preference number: 3 (lower is better)
Translates to: FTAPFSDLGQVP*RATTSQLHHER
Trigger: CCTCTCATGGTGCAACTGGGAAGTTGTGGCCCTGCAAGGGACCTGCCCAAGGTCAGAGAATGGGGCTGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR CCA 72 bp GGGTCACCAGACCTGTTCGTGCCCCTTGACCAGCAATaGCCCCCACACATGAGTCTTCCTGGTTCAGGAACT +
Preference number: 3 (lower is better)
Translates to: GSPDLFVPLDQQ*PPHMSLPGSGT
Trigger: AGTTCCTGAACCAGGAAGACTCATGTGTGGGGGCCATTGCTGGTCAAGGGGCACGAACAGGTCTGGTGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 72 bp GGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATaGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: GLRQWGTWQQTE*RKVKWECLLLA
Trigger: AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR TCA 72 bp GGTCCCTTGCAGGGCCACAACTTCCCAGTTGCACCATaGGAGGTAGACCAGAATGCTTCAGAGAGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: GPLQGHNFPVAP*EVDQNASESPP
Trigger: GGGAGGACTCTCTGAAGCATTCTGGTCTACCTCTCATGGTGCAACTGGGAAGTTGTGGCCCTGCAAGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR CCA 72 bp GCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGGTaGTACCATGGTCACACAGGGAATTCCAGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: AKLSWDPRDTQW*YHGHTGNSRVC
Trigger: ACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 72 bp GATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTaGTGGTACCATGGTCACACAGGGAATTCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: DAKLSWDPRDTQ*WYHGHTGNSRV
Trigger: CACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 72 bp TGGCGCGGTCAGCTTTGTGTTTTAGACAGCTCGCTGTaGCTGTGCATGAGGGATCAACAGGGGAGAGCGAGA +
Preference number: 3 (lower is better)
Translates to: WRGQLCVLDSSL*LCMRDQQGRAR
Trigger: TCTCGCTCTCCCCTGTTGATCCCTCATGCACAGCCACAGCGAGCTGTCTAAAACACAAAGCTGACCGCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR GCA 72 bp GGTCAGCTTTGTGTTTTAGACAGCTCGCTGTGGCTGTaGATGAGGGATCAACAGGGGAGAGCGAGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: GQLCVLDSSLWL*MRDQQGRARGR
Trigger: TCTCCCTCTCGCTCTCCCCTGTTGATCCCTCATGCACAGCCACAGCGAGCTGTCTAAAACACAAAGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CAA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCGTCTCCTCTTCTGCATaGCCTGCTCTGACTTACAGC +
Preference number: 3 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCVSSSA*PALTYS
Trigger: GCTGTAAGTCAGAGCAGGCAATGCAGAAGAGGAGAC...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CAA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACATGGCGCGGTCAGCTTaGTGTTTTAGACAGCTCGCT +
Preference number: 3 (lower is better)
Translates to: GCGGGTESLEKPEETPVNMARSA*CFRQLA
Trigger: AGCGAGCTGTCTAAAACACAAAGCTGACCGCGCCAT...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR TCA 72 bp CACCACGGCCATGAAAGAGTGGGAGGGAGATGCCCATaGTCTTCTGCAACCGATTCTGGATATAGCGTAACC +
Preference number: 3 (lower is better)
Translates to: HHGHERVGGRCP*SSATDSGYSVT
Trigger: GGTTACGCTATATCCAGAATCGGTTGCAGAAGATCATGGGCATCTCCCTCCCACTCTTTCATGGCCGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR CCA 72 bp TGGTTCCTGCTGGATCCTGATCCTCTGGATTCAGACTaGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCA +
Preference number: 3 (lower is better)
Translates to: WFLLDPDPLDSD*SKPYPRSNGGS
Trigger: TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CAA 90 bp AGGGACTCAGTGACCAAGAAATGGAGCAGAGGTCAGCCACCTGGGCTGGAGGTGGATCAAATGCCAGCTTaGTGGAATATGTTCATTGCC +
Preference number: 3 (lower is better)
Translates to: RDSVTKKWSRGQPPGLEVDQMPA*WNMFIA
Trigger: GGCAATGAACATATTCCACAAAGCTGGCATTTGATC...CACCTCCAGCCCAGGTGGCTGACCTCTGCTCCATTTCTTGGTCACTGAGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR-3UTR CAA 90 bp CACTCTGCCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTTTGGCTCTCATCTTTaGGAATCAGCCACCAATGAA +
Preference number: 3 (lower is better)
Translates to: HSACLCHSPFPRRPTCLDFGSHL*ESATNE
Trigger: TTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAAA...GTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR TCA 72 bp CCCTCCTCAAATTATCCTCTGGTTCCTGCTGGATCCTaGTCCTCTGGATTCAGACTGGTCCAAACCCTATCC +
Preference number: 3 (lower is better)
Translates to: PSSNYPLVPAGS*SSGFRLVQTLS
Trigger: GGATAGGGTTTGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTTGAGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 72 bp TCTTCTGCATTGCCTGCTCTGACTTACAGCCTGATATaGGTTGGATTTGCAGGAGTCTGGGAAGGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: SSALPALTYSLI*VGFAGVWEGSA
Trigger: TGCAGAGCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGGCAATGCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR TCA 72 bp AAGAATCCCTGCATGTGTCCACACCCTTTTGTAATATaGCATTGCTGCTCCTCCCATCCAGAGGGGGATCCT +
Preference number: 3 (lower is better)
Translates to: KNPCMCPHPFVI*HCCSSHPEGDP
Trigger: AGGATCCCCCTCTGGATGGGAGGAGCAGCAATGTCATATTACAAAAGGGTGTGGACACATGCAGGGATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 72 bp TGCATTGCCTGCTCTGACTTACAGCCTGATATGGGTTaGATTTGCAGGAGTCTGGGAAGGCTCTGCAGATAT +
Preference number: 3 (lower is better)
Translates to: CIACSDLQPDMG*ICRSLGRLCRY
Trigger: ATATCTGCAGAGCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGGCAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CAA 90 bp AAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTAAGTTTTGGTGGATaGTTTGCAAAGACGGCAGTA +
Preference number: 3 (lower is better)
Translates to: KVWRSQRKPLSTRGTGEDLSFGG*FAKTAV
Trigger: TACTGCCGTCTTTGCAAACAATCCACCAAAACTTAA...GTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 72 bp AGGACTCGAGTCCGTGCAGCTTTGGCTCTCATCTTTTaGAATCAGCCACCAATGAATGTTAACAGACCACTC +
Preference number: 3 (lower is better)
Translates to: RTRVRAALALIF*NQPPMNVNRPL
Trigger: GAGTGGTCTGTTAACATTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCGAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 72 bp AAATTATCCTCTGGTTCCTGCTGGATCCTGATCCTCTaGATTCAGACTGGTCCAAACCCTATCCTAGGAGCA +
Preference number: 3 (lower is better)
Translates to: KLSSGSCWILIL*IQTGPNPILGA
Trigger: TGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR-3UTR CAA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAACGAGTCCGTGCAGCTTaGGCTCTCATCTTTTGGAAT +
Preference number: 3 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQRVRAA*ALIFWN
Trigger: ATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCG...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 72 bp ACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTaGGAAGGCTCTGCAGATATGTTCAACAAACACCTC +
Preference number: 3 (lower is better)
Translates to: TYSLIWVGFAGV*EGSADMFNKHL
Trigger: GAGGTGTTTGTTGAACATATCTGCAGAGCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 72 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTaGGGAAGACTTCTTTGCACAGATAAAATCAGTATT +
Preference number: 3 (lower is better)
Translates to: EKPEETPVNQRH*GRLLCTDKISI
Trigger: AATACTGATTTTATCTGTGCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CCA 72 bp AATGGTTCCTTTTTAAACCCTCCTCAAATTATCCTCTaGTTCCTGCTGGATCCTGATCCTCTGGATTCAGAC +
Preference number: 3 (lower is better)
Translates to: NGSFLNPPQIIL*FLLDPDPLDSD
Trigger: GTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTTGAGGAGGGTTTAAAAAGGAACCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCGGCCCAGTGTCCATGTaGAAAGAGAGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSGPVSM*KERPSP
Trigger: GGGGCTGGGCCTCTCTTTGCACATGGACACTGGGCC...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTTCCCCACCACAGTGGTaGTGGGCCGGCGGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTSPPQW*WAGGRV
Trigger: TACCCTACCGCCGGCCCATCACCACTGTGGTGGGGA...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp GCCTGGGTTATCTCCCAGACCTTCACAGCCCCATTCTCTGACCTTGGGCAGGTCTCCCCACCACAGTGGTaGTGGGCCGGCGGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: AWVISQTFTAPFSDLGQVSPPQW*WAGGRV
Trigger: TACCCTACCGCCGGCCCATCACCACTGTGGTGGGGA...GACCTGCCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGATAACCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCTCCTCCTCCGAGGGATaGAGCGTCTTCTGTACCTCG +
Preference number: 4 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSSSSEG*SVFCTS
Trigger: CGAGGTACAGAAGACGCTGCATCCCTCGGAGGAGGA...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp AGAGATGAGGATGGACAGGCTGGGCCAGATGCTGGAGAGTGGCAAACGGCAGGCCCCAGGAGGCCTACATaGCTGGACTGCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RDEDGQAGPDAGEWQTAGPRRPT*LDCSHR
Trigger: CCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGG...GCCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGTCCATCCTCATCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TCTCCCAGACCTTCACAGCCCCATTCTCTGACCTTGGGCAGGTCCCTTGCAGGGCACCTGGGCTGGAGGTaGAGGCCTGGGTTATCTCCC +
Preference number: 4 (lower is better)
Translates to: SPRPSQPHSLTLGRSLAGHLGWR*RPGLSP
Trigger: GGGAGATAACCCAGGCCTCCACCTCCAGCCCAGGTG...CCCTGCAAGGGACCTGCCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp AGGGACTCAGTGACCAAGAAATGGAGCAGAGGTCAGCCACCTGGGCTGGAGGTGGTGTCAGGGCGAGCCTaGCGAAGCCCTTTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: RDSVTKKWSRGQPPGLEVVSGRA*RSPFGS
Trigger: GGAACCGAAAGGGCTTCGTCAGGCTCGCCCTGACAC...CACCTCCAGCCCAGGTGGCTGACCTCTGCTCCATTTCTTGGTCACTGAGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTCCCCACCACAGTGGTaGTGGGCCGGCGGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKSPPQW*WAGGRV
Trigger: TACCCTACCGCCGGCCCATCACCACTGTGGTGGGGA...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTCGCTGTGGCTGTGCATaGGGGATCAACAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLRCGCA*GINRGE
Trigger: CTCTCCCCTGTTGATCCCTCATGCACAGCCACAGCG...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGTTGGCCTGGCAAACGGCAGGCTaGGAAGCTCGGGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LQEVFSAQHLLLGSLMLAWQTAG*EARAWK
Trigger: CTTCCAGGCCCGAGCTTCTCAGCCTGCCGTTTGCCA...GGCCAACATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTACTGCCAGGACTCCATaGGGGTGGAAGCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLTARTP*GWKPAM
Trigger: CATTGCGGGCTTCCACCCCCATGGAGTCCTGGCAGT...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TCTCCCAGACCTTCACAGCCCCATTCTCTGACCTTGGGCAGGTCCCTTGCAGGGGCATCCAGGGCCTCCTaGGCACCCCCTACAATGATG +
Preference number: 4 (lower is better)
Translates to: SPRPSQPHSLTLGRSLAGASRAS*APPTMM
Trigger: CATCATTGTAGGGGGTGCCCAGGAGGCCCTGGATGC...CCCTGCAAGGGACCTGCCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGGCAGCGATGCAAAGCTaGGCTGGGATCCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKAAMQS*AGILGT
Trigger: TGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGC...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGGCAGCGATGCAAAGCTaGGCTGGGATCCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: REIGQRCKAELGSSGHTVAAMQS*AGILGT
Trigger: TGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGC...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTAGGGAGGAAGAGAGATaGGGATGGACAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTREEER*GWTGWA
Trigger: GGCCCAGCCTGTCCATCCTCATCTCTCTTCCTCCCT...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGTTGGCCAGGGAGGAAGAGAGATaGGGATGGACAGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LQEVFSAQHLLLGSLMLAREEER*GWTGWA
Trigger: GGCCCAGCCTGTCCATCCTCATCTCTCTTCCTCCCT...GGCCAACATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGACAGCAAGTGTCTaGAGCCTGCGCTCCCACGGC +
Preference number: 4 (lower is better)
Translates to: CLCHSPFPRRPTCLDCSHRTASV*SLRSHG
Trigger: GCCGTGGGAGCGCAGGCTGCAGACACTTGCTGTCCT...GTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000198801.10
CDS-3UTR GCA 90 bp TCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGGGCCCAGTGTCCATGTaGAAAGAGAGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SSGHTVVVPWSHREFQGVGPVSM*KERPSP
Trigger: GGGGCTGGGCCTCTCTTTGCACATGGACACTGGGCC...CACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp AGAGATGAGGATGGACAGGCTGGGCCAGATGCTGGAGAGTGGCAAACGGCAGGCTCCTGGCTCCTCCCTTaGAGGGTCACCAGACCTGTT +
Preference number: 4 (lower is better)
Translates to: RDEDGQAGPDAGEWQTAGSWLLP*RVTRPV
Trigger: AACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGA...GCCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGTCCATCCTCATCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCTACATGCCTGGACTaGAGCCACAGGCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKPTCLD*SHRPSF
Trigger: GAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGG...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTACTGCCAGGACTCCATaGGGGTGGAAGCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTTARTP*GWKPAM
Trigger: CATTGCGGGCTTCCACCCCCATGGAGTCCTGGCAGT...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGGGGAATGCTTGCTCCTaGCTCCTCCCTTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKGNACS*LLPCRV
Trigger: GACCCTGCAAGGGAGGAGCCAGGAGCAAGCATTCCC...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTGTTGGGCTCAGGCAGTaGGGAACTTGGCAGCAGACT +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLVGLRQ*GTWQQT
Trigger: AGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CACTCTGCCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACGGCTGGGCCAGATGCTaGAGAGTGGCAAACGGCAGG +
Preference number: 4 (lower is better)
Translates to: HSACLCHSPFPRRPTCLDGWARC*RVANGR
Trigger: CCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCC...GTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACGGGCACCCCCTACAATaGTGCCCAGCAAGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: CLCHSPFPRRPTCLDCSHGHPLQ*CPASFR
Trigger: GCGGAAACTTGCTGGGCATCATTGTAGGGGGTGCCC...GTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGTCCGCAGTAACAGCGTaGAGGATCCAGGCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKSAVTA*RIQAWH
Trigger: ATGCCAGGCCTGGATCCTTCACGCTGTTACTGCGGA...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCCTGTTCGTGCCCCTTaGCCAGCAATGGCCCCCACA +
Preference number: 4 (lower is better)
Translates to: GCGGGTESLEKPEETPVNPVRAP*PAMAPT
Trigger: TGTGGGGGCCATTGCTGGTCAAGGGGCACGAACAGG...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTTGTTCCGTCTTCCGTTaGCCCCTCCAGATCCACTCT +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLCSVFR*PLQIHS
Trigger: AGAGTGGATCTGGAGGGGTCAACGGAAGACGGAACA...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp ATCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGCGCGAACTCTACCATaGTGGCGGGTCAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ILGTHSGGTMVTQGIPGCARTLP*WRVSLA
Trigger: AGCCAGGCTGACCCGCCAGCATGGTAGAGTTCGCGC...ACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000198801.10
CDS-3UTR GCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTGAGATAGGGCAGCGATaGAAAGCTGAGCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLEIGQR*KAELGS
Trigger: GGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTC...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTTCCTGGCTCCTCCCTTaGAGGGTCACCAGACCTGTT +
Preference number: 4 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTSWLLP*RVTRPV
Trigger: AACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGA...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCCCAGGAGGCCTACATaGCTGGACTGCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GCGGGTESLEKPEETPVNPRRPT*LDCSHR
Trigger: CCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGG...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGACAGGCTGGGCCAGATaGTGGAGAGTGGCAAACGGC +
Preference number: 4 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVTGWAR*WRVANG
Trigger: GCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGT...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGTGTCCCTCCCGCTCCTaGCTCTTGTCTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVCPSRS*LLSVAT
Trigger: AGTGGCCACAGACAAGAGGCAGGAGCGGGAGGGACA...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR CCA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATCCCGAAGGAGAAGATTaGCACCAGGGGTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNPEGED*HQGCPV
Trigger: CACGGGGCACCCCTGGTGCCAATCTTCTCCTTCGGG...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AGAGATGAGGATGGACAGGCTGGGCCAGATGCTGGAGAGTGGCAAACGGCAGGCTCTTCTGTACCTCGATaGGCTTCCCCACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RDEDGQAGPDAGEWQTAGSSVPR*ASPPQW
Trigger: CCACTGTGGTGGGGAAGCCCATCGAGGTACAGAAGA...GCCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGTCCATCCTCATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACCCCCAGCTGACCCCTTaGTCTGGTCTCCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CLCHSPFPRRPTCLDCSHPQLTP*SGLLFC
Trigger: GCAGAAGAGGAGACCAGACCAAGGGGTCAGCTGGGG...GTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCGGGACACACAGTGGTaGTACCATGGTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKRDTQW*YHGHTG
Trigger: CCCTGTGTGACCATGGTACCACCACTGTGTGTCCCG...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGCGGGACACACAGTGGTaGTACCATGGTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: REIGQRCKAELGSSGHTVRDTQW*YHGHTG
Trigger: CCCTGTGTGACCATGGTACCACCACTGTGTGTCCCG...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTTTCCAGGCCTCAGGGTaGAAACAGTGCACACACCTC +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLFQASG*KQCTHL
Trigger: GAGGTGTGTGCACTGTTTCCACCCTGAGGCCTGGAA...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGGGGAATGCTTGCTCCTaGCTCCTCCCTTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKGNACS*LLPCRV
Trigger: GACCCTGCAAGGGAGGAGCCAGGAGCAAGCATTCCC...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCTGGCAGCAGACTGAATaGAGGAAGGTGAAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSWQQTE*RKVKWE
Trigger: TTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCA...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AGAGATGAGGATGGACAGGCTGGGCCAGATGCTGGAGAGTGGCAAACGGCAGGCTGTTTGTGGGTAGGCTaGAGGGAGTGCACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: RDEDGQAGPDAGEWQTAGCLWVG*RECTRG
Trigger: GCCTCTAGTGCACTCCCTCCAGCCTACCCACAAACA...GCCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGTCCATCCTCATCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGTGCAGGTCCTGTTTGTaGGTAGGCTGGAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: REIGQRCKAELGSSGHTVCRSCL*VGWREC
Trigger: GCACTCCCTCCAGCCTACCCACAAACAGGACCTGCA...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCCAAGTAGCTCAGCCTaGCCTCCAGGAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GCGGGTESLEKPEETPVNPSSSA*PPGAPE
Trigger: CTCTGGGGCTCCTGGAGGCCAGGCTGAGCTACTTGG...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR CCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGAGTGCAGATCTCGGCTaGGGAGGGAAGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: REIGQRCKAELGSSGHTVSADLG*GGKKEL
Trigger: CAGCTCCTTCTTCCCTCCCCAGCCGAGATCTGCACT...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR TCA 90 bp CTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGTTGGCCCCAGCTCAGCAGTCTTaGCCAGCGAGATGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LQEVFSAQHLLLGSLMLAPAQQS*PARWGN
Trigger: ATTTCCCCATCTCGCTGGTCAAGACTGCTGAGCTGG...GGCCAACATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTGGAGGGAGATGCCCATaGTCTTCTGCAACCGATTCT +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLGGRCP*SSATDS
Trigger: AGAATCGGTTGCAGAAGATCATGGGCATCTCCCTCC...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp TCTCCCAGACCTTCACAGCCCCATTCTCTGACCTTGGGCAGGTCCCTTGCAGGGGGAGGGAGATGCCCATaGTCTTCTGCAACCGATTCT +
Preference number: 4 (lower is better)
Translates to: SPRPSQPHSLTLGRSLAGGGRCP*SSATDS
Trigger: AGAATCGGTTGCAGAAGATCATGGGCATCTCCCTCC...CCCTGCAAGGGACCTGCCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGAAGACACCACGGCCATaGAAGAGTGGGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKKTPRP*KSGREM
Trigger: CATCTCCCTCCCACTCTTTCATGGCCGTGGTGTCTT...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATACAGGCTGGGCCAGATaGTGGAGAGTGGCAAACGGC +
Preference number: 4 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNTGWAR*WRVANG
Trigger: GCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGT...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGGTCAGCATCATCAGATaGGGGCGGATACCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKVSIIR*GRIPGK
Trigger: CTTCCCCGGTATCCGCCCCCATCTGATGATGCTGAC...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCCCCAGCTGACCCCTTaGTCTGGTCTCCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GCGGGTESLEKPEETPVNPQLTP*SGLLFC
Trigger: GCAGAAGAGGAGACCAGACCAAGGGGTCAGCTGGGG...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGGTTGGGCTCAGGCAGTaGGGAACTTGGCAGCAGACT +
Preference number: 4 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVVGLRQ*GTWQQT
Trigger: AGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACTGCAGGTCCTGTTTGTaGGTAGGCTGGAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: CLCHSPFPRRPTCLDCSHCRSCL*VGWREC
Trigger: GCACTCCCTCCAGCCTACCCACAAACAGGACCTGCA...GTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CAA 72 bp CAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTaGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACC +
Preference number: 4 (lower is better)
Translates to: QQTEWRKVKWEC*LLAPPLQGHQT
Trigger: GGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CAA 72 bp AGCTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTaGACCCCTCCAGATCCACTCTGCCTGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSGLEVDMFRLP*TPPDPLCLSLP
Trigger: TGGCAAAGACAGGCAGAGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGCCAGCTCAGCAGTCTTaGCCAGCGAGATGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVPAQQS*PARWGN
Trigger: ATTTCCCCATCTCGCTGGTCAAGACTGCTGAGCTGG...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGAAGACACCACGGCCATaGAAGAGTGGGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVKTPRP*KSGREM
Trigger: CATCTCCCTCCCACTCTTTCATGGCCGTGGTGTCTT...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTGGTTGCACAGCTCTTTaGTATAACGCTGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLGCTAL*YNAGAA
Trigger: AGCTGCACCAGCGTTATATCAAAGAGCTGTGCAACC...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCATGTCCTAGCCCCAGCTaGCCCCTTGGTCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSCPSPS*PLGLVS
Trigger: GGAGACCAGACCAAGGGGTCAGCTGGGGCTAGGACA...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGCTGAATGGAGGAAGGTaGAGTGGGAATGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: REIGQRCKAELGSSGHTVLNGGR*SGNACS
Trigger: GGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAG...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp TCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGTTCCGTCTTCCGTTaGCCCCTCCAGATCCACTCT +
Preference number: 4 (lower is better)
Translates to: SSGHTVVVPWSHREFQGVCSVFR*PLQIHS
Trigger: AGAGTGGATCTGGAGGGGTCAACGGAAGACGGAACA...CACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp AAGGAGAAGATTGGCACCAGGGGTGCCCTGGAGACAAATAGAGGAAAGAGGGCACTCTTCCCAGAGGCTTaGTACCCGTGTGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: KEKIGTRGALETNRGKRALFPEA*YPCVRA
Trigger: CGCCCTGACACACGGGTATCAAGCCTCTGGGAAGAG...TGCCCTCTTTCCTCTATTTGTCTCCAGGGCACCCCTGGTGCCAATCTTCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCCCTACATGCCTGGACTaGAGCCACAGGCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGPTCLD*SHRPSF
Trigger: GAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGG...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp GAGGGCATGTGGGAGGCCCCAGAGAAGGCACGAGCTGAAAGGCCCTTTAGCTTCCAACTGAACCCAGAGTaGTCTTCCCAGAGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: EGMWEAPEKARAERPFSFQLNPE*SSQRLD
Trigger: ATCAAGCCTCTGGGAAGAGCACTCTGGGTTCAGTTG...GAAGCTAAAGGGCCTTTCAGCTCGTGCCTTCTCTGGGGCCTCCCACATGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGTCAGCATCATCAGATaGGGGCGGATACCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNVSIIR*GRIPGK
Trigger: CTTCCCCGGTATCCGCCCCCATCTGATGATGCTGAC...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTCTTCTGTACCTCGATaGGCTTCCCCACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SSGHTVVVPWSHREFQGVSSVPR*ASPPQW
Trigger: CCACTGTGGTGGGGAAGCCCATCGAGGTACAGAAGA...CACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTCAGAACTCCAAGTGCTaGTCAGCAGGGATGTTGAAC +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLQNSKC*SAGMLN
Trigger: GTTCAACATCCCTGCTGACCAGCACTTGGAGTTCTG...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGGATGCAAAGCTGAGCTaGGATCCTCGGGACACACAG +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKDAKLS*DPRDTQ
Trigger: CTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATC...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGCCCCTTGACCAGCAATaGCCCCCACACATGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKPLDQQ*PPHMSL
Trigger: AAGACTCATGTGTGGGGGCCATTGCTGGTCAAGGGG...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCAGGAGGCCTACATGCCTaGACTGCAGCCACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSGGLHA*TAATGP
Trigger: AGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCC...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCAGGCTGGGCCAGATGCTaGAGAGTGGCAAACGGCAGG +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSGWARC*RVANGR
Trigger: CCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCC...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGGCGCAGCATTTACCTaGACAGCAACACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNGAAFT*TATPPP
Trigger: GGGAGGAGGTGTTGCTGTCCAGGTAAATGCTGCGCC...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCTCCGCAGTAACAGCGTaGAGGATCCAGGCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGSAVTA*RIQAWH
Trigger: ATGCCAGGCCTGGATCCTTCACGCTGTTACTGCGGA...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CACTCTGCCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACGTTCCTGCTGGATCCTaGTCCTCTGGATTCAGACTG +
Preference number: 4 (lower is better)
Translates to: HSACLCHSPFPRRPTCLDVPAGS*SSGFRL
Trigger: CAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAAC...GTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGAACTTGGCAGCAGACTaGATGGAGGAAGGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKNLAAD*MEEGEV
Trigger: CACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTT...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp AGGAAAGAGGGCATGTGGGAGGCCCCAGAGAAGGCACGAGCTGAAAGGCCCTTTTTCCCAGTTGCACCATaGGAGGTAGACCAGAATGCT +
Preference number: 4 (lower is better)
Translates to: RKEGMWEAPEKARAERPFFPVAP*EVDQNA
Trigger: AGCATTCTGGTCTACCTCTCATGGTGCAACTGGGAA...AAAGGGCCTTTCAGCTCGTGCCTTCTCTGGGGCCTCCCACATGCCCTCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp CAAGTGCTGGTCAGCAGGGATGTTGAACTTAAGTTTGTGGGCCTCGAAGAGGTTAGGACAGCAAGTGTCTaGAGCCTGCGCTCCCACGGC +
Preference number: 4 (lower is better)
Translates to: QVLVSRDVELKFVGLEEVRTASV*SLRSHG
Trigger: GCCGTGGGAGCGCAGGCTGCAGACACTTGCTGTCCT...AACCTCTTCGAGGCCCACAAACTTAAGTTCAACATCCCTGCTGACCAGCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp AGGGACTCAGTGACCAAGAAATGGAGCAGAGGTCAGCCACCTGGGCTGGAGGTGGCAGATCTCGGCCAGTaGCAAGAAGGAGAAGACAAA +
Preference number: 4 (lower is better)
Translates to: RDSVTKKWSRGQPPGLEVADLGQ*QEGEDK
Trigger: TTTGTCTTCTCCTTCTTGGCACTGGCCGAGATCTGC...CACCTCCAGCCCAGGTGGCTGACCTCTGCTCCATTTCTTGGTCACTGAGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp AAGGAGAAGATTGGCACCAGGGGTGCCCTGGAGACAAATAGAGGAAAGAGGGCATCCTCCTCCGAGGGATaGAGCGTCTTCTGTACCTCG +
Preference number: 4 (lower is better)
Translates to: KEKIGTRGALETNRGKRASSSEG*SVFCTS
Trigger: CGAGGTACAGAAGACGCTGCATCCCTCGGAGGAGGA...TGCCCTCTTTCCTCTATTTGTCTCCAGGGCACCCCTGGTGCCAATCTTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACCAGCAGAACTCCAAGTaGTGGTCAGCAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: CLCHSPFPRRPTCLDCSHQQNSK*WSAGML
Trigger: CAACATCCCTGCTGACCAGCACTTGGAGTTCTGCTG...GTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACGCCTGGGGTGGAGAGTaGTTGTGCTTCAGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: CLCHSPFPRRPTCLDCSHAWGGE*LCFRLL
Trigger: TAAAAGCCTGAAGCACAAGCACTCTCCACCCCAGGC...GTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGAGATAGGGCAGCGATaGAAAGCTGAGCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNEIGQR*KAELGS
Trigger: GGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTC...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGTTGGCCTTATCCTCTGGTTCCTaGTGGATCCTGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LQEVFSAQHLLLGSLMLALSSGS*WILILW
Trigger: CCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAA...GGCCAACATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTCACCAGACCTGTTCGTaGCCCTTGACCAGCAATGGC +
Preference number: 4 (lower is better)
Translates to: TWQQTEWRKVKWECLLLAHQTCS*PLTSNG
Trigger: GCCATTGCTGGTCAAGGGGCACGAACAGGTCTGGTG...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGCCTCCAGATCCACTCTaGCTGTCTTTGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVPPDPL*LSLPFS
Trigger: GGAGAATGGCAAAGACAGGCAGAGTGGATCTGGAGG...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGGGATTTGCAGGAGTCTaGGAAGGCTCTGCAGATATG +
Preference number: 4 (lower is better)
Translates to: REIGQRCKAELGSSGHTVGFAGV*EGSADM
Trigger: CATATCTGCAGAGCCTTCCCAGACTCCTGCAAATCC...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCGCTGACCCCTTGGTCTaGTCTCCTCTTCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCADPLV*SPLLHC
Trigger: GCAATGCAGAAGAGGAGACCAGACCAAGGGGTCAGC...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCCCTCGGGACACACAGTaGTGGTACCATGGTCACACA +
Preference number: 4 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCPRDTQ*WYHGHT
Trigger: TGTGTGACCATGGTACCACCACTGTGTGTCCCGAGG...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGTGGCAGCAGACTGAATaGAGGAAGGTGAAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: REIGQRCKAELGSSGHTVWQQTE*RKVKWE
Trigger: TTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCA...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACAGGCAGTGGGGAACTTaGCAGCAGACTGAATGGAGG +
Preference number: 4 (lower is better)
Translates to: GCGGGTESLEKPEETPVNRQWGT*QQTEWR
Trigger: CCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCT...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCGCTCGGGCCTGGAAGTaGACATGTTCCGTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGARAWK*TCSVFR
Trigger: ACGGAAGACGGAACATGTCCACTTCCAGGCCCGAGC...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCACAAAGAAATGCAAATaGTTCCGAGTGATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSTKKCK*FRVMGA
Trigger: TGCTCCCATCACTCGGAACCATTTGCATTTCTTTGT...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTGGCGCAGCATTTACCTaGACAGCAACACCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TWQQTEWRKVKWECLLLAGAAFT*TATPPP
Trigger: GGGAGGAGGTGTTGCTGTCCAGGTAAATGCTGCGCC...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp TTATCCAGACAAGGGGGAGATAATGGGGAGGATATGGCATTCCATGGCATCCAAGTGTCAGGGCGAGCCTaGCGAAGCCCTTTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSRQGGDNGEDMAFHGIQVSGRA*RSPFGS
Trigger: GGAACCGAAAGGGCTTCGTCAGGCTCGCCCTGACAC...TTGGATGCCATGGAATGCCATATCCTCCCCATTATCTCCCCCTTGTCTGGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp AAATTATCCTCTGGTTCCTGCTGGATCCTGATCCTCTGGATTCAGACTGGTCCAGTGTCAGGGCGAGCCTaGCGAAGCCCTTTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: KLSSGSCWILILWIQTGPVSGRA*RSPFGS
Trigger: GGAACCGAAAGGGCTTCGTCAGGCTCGCCCTGACAC...TGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp ATCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGGAGGGAGATGCCCATaGTCTTCTGCAACCGATTCT +
Preference number: 4 (lower is better)
Translates to: ILGTHSGGTMVTQGIPGCGGRCP*SSATDS
Trigger: AGAATCGGTTGCAGAAGATCATGGGCATCTCCCTCC...ACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCCTGAATGGAGGAAGGTaGAGTGGGAATGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCLNGGR*SGNACS
Trigger: GGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAG...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp TCGAGTCCGTGCAGCTTTGGCTCTCATCTTTTGGAATCAGCCACCAATGAATGTTGGCAAACGGCAGGCTaGGAAGCTCGGGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SSPCSFGSHLLESATNECWQTAG*EARAWK
Trigger: CTTCCAGGCCCGAGCTTCTCAGCCTGCCGTTTGCCA...ACATTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTGTTCAGTTTTATTTGTaGGACAGGATGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLVQFYL*DRMQVL
Trigger: CAGGACCTGCATCCTGTCTCACAAATAAAACTGAAC...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGTCTGGTCTCCTCTTCTaGATTGCCTGCTCTGACTTA +
Preference number: 4 (lower is better)
Translates to: REIGQRCKAELGSSGHTVSGLLF*IACSDL
Trigger: TAAGTCAGAGCAGGCAATGCAGAAGAGGAGACCAGA...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGTGGTTCAGGAACTGCTaGTTCCATTCATCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKWFRNC*FHSSFQ
Trigger: CTGGAAGGATGAATGGAAGCAGCAGTTCCTGAACCA...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GAGGTTGCACAGCTCTTTGATATAACGCTGGTGCAGCTGGTTCACCTCCTCCTCTCTCAGTGCACAGGTTaGCAAAGGCTCCGACTGCCA +
Preference number: 4 (lower is better)
Translates to: EVAQLFDITLVQLVHLLLSQCTG*QRLRLP
Trigger: TGGCAGTCGGAGCCTTTGCCAACCTGTGCACTGAGA...GAGGAGGAGGTGAACCAGCTGCACCAGCGTTATATCAAAGAGCTGTGCAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp CAGGAGCCAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGGTCAGCATCATCAGATaGGGGCGGATACCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QEPEELGIWSNRSFSPKEVSIIR*GRIPGK
Trigger: CTTCCCCGGTATCCGCCCCCATCTGATGATGCTGAC...CTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTGGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp TCTCCCAGACCTTCACAGCCCCATTCTCTGACCTTGGGCAGGTCCCTTGCAGGGTTGAACTTAAGTTTGTaGGCCTCGAAGAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: SPRPSQPHSLTLGRSLAGLNLSL*ASKRLH
Trigger: GTGCAACCTCTTCGAGGCCCACAAACTTAAGTTCAA...CCCTGCAAGGGACCTGCCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp CTAGGACTCGAGTCCGTGCAGCTTTGGCTCTCATCTTTTGGAATCAGCCACCAAGTTGGCCCTGCCCTTTaGGCTCAGCAGAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: LGLESVQLWLSSFGISHQVGPAL*AQQNSK
Trigger: CTTGGAGTTCTGCTGAGCCCAAAGGGCAGGGCCAAC...TTGGTGGCTGATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCGAGTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGACAGTGGTGGTACCATaGTCACACAGGGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKTVVVP*SHREFQ
Trigger: CTGGAATTCCCTGTGTGACCATGGTACCACCACTGT...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGACAGTGGTGGTACCATaGTCACACAGGGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVTVVVP*SHREFQ
Trigger: CTGGAATTCCCTGTGTGACCATGGTACCACCACTGT...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTCCTCGGGACACACAGTaGTGGTACCATGGTCACACA +
Preference number: 4 (lower is better)
Translates to: TWQQTEWRKVKWECLLLAPRDTQ*WYHGHT
Trigger: TGTGTGACCATGGTACCACCACTGTGTGTCCCGAGG...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AGAGATGAGGATGGACAGGCTGGGCCAGATGCTGGAGAGTGGCAAACGGCAGGCCCTCAAATTATCCTCTaGTTCCTGCTGGATCCTGAT +
Preference number: 4 (lower is better)
Translates to: RDEDGQAGPDAGEWQTAGPQIIL*FLLDPD
Trigger: ATCAGGATCCAGCAGGAACCAGAGGATAATTTGAGG...GCCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGTCCATCCTCATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGACACATGAGTCTTCCTaGTTCAGGAACTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKTHESS*FRNCCF
Trigger: GAAGCAGCAGTTCCTGAACCAGGAAGACTCATGTGT...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCCCCCTTGACCAGCAATaGCCCCCACACATGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGPLDQQ*PPHMSL
Trigger: AAGACTCATGTGTGGGGGCCATTGCTGGTCAAGGGG...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GAGCCAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGAAGCCCGAAGGAGAAGATTaGCACCAGGGGTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: EPEELGIWSNRSFSPKEKPEGED*HQGCPG
Trigger: TCCAGGGCACCCCTGGTGCCAATCTTCTCCTTCGGG...CTTCTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGGTTGCACAGCTCTTTaGTATAACGCTGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNGCTAL*YNAGAA
Trigger: AGCTGCACCAGCGTTATATCAAAGAGCTGTGCAACC...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTCTATTCCTTACTCCTTaGATCTGCTGGGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTLFLTP*ICWVVT
Trigger: AGTCACAACCCAGCAGATTCAAGGAGTAAGGAATAG...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTCACCCTTTTGTAATATaGCATTGCTGCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTHPFVI*HCCSSH
Trigger: ATGGGAGGAGCAGCAATGTCATATTACAAAAGGGTG...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp AAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACGATATGGGTTGGATTTaGAGGAGTCTGGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: KVWRSQRKPLSTRGTGEDDMGWI*RSLGRL
Trigger: GAGCCTTCCCAGACTCCTGCAAATCCAACCCATATC...GTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGGGCAGTAAGAATCCCTaGATGTGTCCACACCCTTTT +
Preference number: 4 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVGSKNP*MCPHPF
Trigger: AAAAGGGTGTGGACACATGCAGGGATTCTTACTGCC...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp AGAGATGAGGATGGACAGGCTGGGCCAGATGCTGGAGAGTGGCAAACGGCAGGCGGTGGAGAGTGCTTGTaGTTCAGGCTTTTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: RDEDGQAGPDAGEWQTAGGGECL*FRLLVF
Trigger: AAAAACTAAAAGCCTGAAGCACAAGCACTCTCCACC...GCCTGCCGTTTGCCACTCTCCAGCATCTGGCCCAGCCTGTCCATCCTCATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTGCCTGGGGTGGAGAGTaGTTGTGCTTCAGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: TWQQTEWRKVKWECLLLAAWGGE*LCFRLL
Trigger: TAAAAGCCTGAAGCACAAGCACTCTCCACCCCAGGC...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGTTCAGGAACTGCTaGTTCCATTCATCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKWFRNC*FHSSFQ
Trigger: CTGGAAGGATGAATGGAAGCAGCAGTTCCTGAACCA...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGTCCTGGTTCAGGAACTaGTGCTTCCATTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVSWFRN*CFHSSF
Trigger: GAAGGATGAATGGAAGCAGCAGTTCCTGAACCAGGA...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTCCTCCAGATCCACTCTaGCTGTCTTTGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: TWQQTEWRKVKWECLLLAPPDPL*LSLPFS
Trigger: GGAGAATGGCAAAGACAGGCAGAGTGGATCTGGAGG...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGTTGGCCATTTGTGAGACAGGATaGAGGTCCTGTTTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: LQEVFSAQHLLLGSLMLAICETG*RSCLWV
Trigger: TACCCACAAACAGGACCTGCATCCTGTCTCACAAAT...GGCCAACATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AAATTATCCTCTGGTTCCTGCTGGATCCTGATCCTCTGGATTCAGACTGGTCCAGCATCCAGGGCCTCCTaGGCACCCCCTACAATGATG +
Preference number: 4 (lower is better)
Translates to: KLSSGSCWILILWIQTGPASRAS*APPTMM
Trigger: CATCATTGTAGGGGGTGCCCAGGAGGCCCTGGATGC...TGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GACTTGCTTCGACCAACAGAATGCAGTAGAAGAGATGCTTGTGAGGTGTGCAGCGTTGGCCCTGCCCTTTaGGCTCAGCAGAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: DLLRPTECSRRDACEVCSVGPAL*AQQNSK
Trigger: CTTGGAGTTCTGCTGAGCCCAAAGGGCAGGGCCAAC...GCTGCACACCTCACAAGCATCTCTTCTACTGCATTCTGTTGGTCGAAGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCAGCTGACCCCTTGGTCTaGTCTCCTCTTCTGCATTGC +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSADPLV*SPLLHC
Trigger: GCAATGCAGAAGAGGAGACCAGACCAAGGGGTCAGC...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGGAGTCCGTGCAGCTTTaGCTCTCATCTTTTGGAATC +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKESVQL*LSSFGI
Trigger: GATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTC...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTCCTCTGGTTCCTGCTaGATCCTGATCCTCTGGATT +
Preference number: 4 (lower is better)
Translates to: KVWRSQRKPLSTRGTGEDSSGSC*ILILWI
Trigger: AATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGA...GTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGCCTCAAATTATCCTCTaGTTCCTGCTGGATCCTGAT +
Preference number: 4 (lower is better)
Translates to: REIGQRCKAELGSSGHTVPQIIL*FLLDPD
Trigger: ATCAGGATCCAGCAGGAACCAGAGGATAATTTGAGG...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTTGGAGGAAGGTGAAGTaGGAATGCTTGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: TWQQTEWRKVKWECLLLAWRKVK*ECLLLA
Trigger: AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCA...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCATGTTTGTGGGTAGGCTaGAGGGAGTGCACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSCLWVG*RECTRG
Trigger: GCCTCTAGTGCACTCCCTCCAGCCTACCCACAAACA...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CCAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGAAGATTGGGCACCCCCTACAATaGTGCCCAGCAAGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: PEELGIWSNRSFSPKEKIGHPLQ*CPASFR
Trigger: GCGGAAACTTGCTGGGCATCATTGTAGGGGGTGCCC...AATCTTCTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAATGTCCTAGCCCCAGCTaGCCCCTTGGTCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQCPSPS*PLGLVS
Trigger: GGAGACCAGACCAAGGGGTCAGCTGGGGCTAGGACA...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTGAATCTGCTGGGTTGTaGCTTGCTTCGACCAACAGA +
Preference number: 4 (lower is better)
Translates to: TWQQTEWRKVKWECLLLAESAGL*LASTNR
Trigger: TCTGTTGGTCGAAGCAAGTCACAACCCAGCAGATTC...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCGAATCTGCTGGGTTGTaGCTTGCTTCGACCAACAGA +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGESAGL*LASTNR
Trigger: TCTGTTGGTCGAAGCAAGTCACAACCCAGCAGATTC...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CACTCTGCCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACCACCCTTTTGTAATATaGCATTGCTGCTCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: HSACLCHSPFPRRPTCLDHPFVI*HCCSSH
Trigger: ATGGGAGGAGCAGCAATGTCATATTACAAAAGGGTG...GTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp ACCCCAAGGAGGGAGAACAGCTCTGAAATGTACCCCAAATATCACTCTTCTAGACACAGCCCCATTCTCTaGCCTTGGGCAGGTCCCTTG +
Preference number: 4 (lower is better)
Translates to: TPRRENSSEMYPKYHSSRHSPIL*PWAGPL
Trigger: CAAGGGACCTGCCCAAGGTCAGAGAATGGGGCTGTG...TCTAGAAGAGTGATATTTGGGGTACATTTCAGAGCTGTTCTCCCTCCTTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCCTCTTCTGCATTGCCTaGTCTGACTTACAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCLFCIA*SDLQPD
Trigger: ATCAGGCTGTAAGTCAGAGCAGGCAATGCAGAAGAG...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCTCTGGTCTCCTCTTCTaGATTGCCTGCTCTGACTTA +
Preference number: 4 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCSGLLF*IACSDL
Trigger: TAAGTCAGAGCAGGCAATGCAGAAGAGGAGACCAGA...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp GCCTGGGTTATCTCCCAGACCTTCACAGCCCCATTCTCTGACCTTGGGCAGGTCATCTGCATTCGTCTCTaGCATCTTCCCACCAAAATA +
Preference number: 4 (lower is better)
Translates to: AWVISQTFTAPFSDLGQVICIRL*HLPTKI
Trigger: TATTTTGGTGGGAAGATGGCAGAGACGAATGCAGAT...GACCTGCCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGATAACCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCATAAATCCAGCCAGGTaGCTCCCCTTATTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGINPAR*LPLFKP
Trigger: GGGCTTGAATAAGGGGAGGCACCTGGCTGGATTTAT...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR CCA 90 bp GACTTGCTTCGACCAACAGAATGCAGTAGAAGAGATGCTTGTGAGGTGTGCAGCTCTCAGTGCACAGGTTaGCAAAGGCTCCGACTGCCA +
Preference number: 4 (lower is better)
Translates to: DLLRPTECSRRDACEVCSSQCTG*QRLRLP
Trigger: TGGCAGTCGGAGCCTTTGCCAACCTGTGCACTGAGA...GCTGCACACCTCACAAGCATCTCTTCTACTGCATTCTGTTGGTCGAAGCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGAGGAGCCAGAAGAGTTaGGAATCTGGTCAAATAGGT +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKRSQKS*ESGQIG
Trigger: ACCTATTTGACCAGATTCCCAACTCTTCTGGCTCCT...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CAAGTGCTGGTCAGCAGGGATGTTGAACTTAAGTTTGTGGGCCTCGAAGAGGTTTCTTCTGTACCTCGATaGGCTTCCCCACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: QVLVSRDVELKFVGLEEVSSVPR*ASPPQW
Trigger: CCACTGTGGTGGGGAAGCCCATCGAGGTACAGAAGA...AACCTCTTCGAGGCCCACAAACTTAAGTTCAACATCCCTGCTGACCAGCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTTGAACTTAAGTTTGTaGGCCTCGAAGAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKLNLSL*ASKRLH
Trigger: GTGCAACCTCTTCGAGGCCCACAAACTTAAGTTCAA...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ATCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGAGTCCGTGCAGCTTTaGCTCTCATCTTTTGGAATC +
Preference number: 4 (lower is better)
Translates to: ILGTHSGGTMVTQGIPGCESVQL*LSSFGI
Trigger: GATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTC...ACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACACACATGAGTCTTCCTaGTTCAGGAACTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GCGGGTESLEKPEETPVNTHESS*FRNCCF
Trigger: GAAGCAGCAGTTCCTGAACCAGGAAGACTCATGTGT...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCATGGAGGAAGGTGAAGTaGGAATGCTTGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSWRKVK*ECLLLA
Trigger: AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCA...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TTATCCAGACAAGGGGGAGATAATGGGGAGGATATGGCATTCCATGGCATCCAAGCTCGGGCCTGGAAGTaGACATGTTCCGTCTTCCGT +
Preference number: 4 (lower is better)
Translates to: LSRQGGDNGEDMAFHGIQARAWK*TCSVFR
Trigger: ACGGAAGACGGAACATGTCCACTTCCAGGCCCGAGC...TTGGATGCCATGGAATGCCATATCCTCCCCATTATCTCCCCCTTGTCTGGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGGATATGGCATTCCATaGCATCCAACATCATGGGCA +
Preference number: 4 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNGYGIP*HPTSWA
Trigger: TGCCCATGATGTTGGATGCCATGGAATGCCATATCC...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCGTCAACCAGAGGCACTaGGGAAGACTTCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGVNQRH*GRLLCT
Trigger: TGTGCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGAC...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAACGCTGTGGCTGTGCATaGGGGATCAACAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQRCGCA*GINRGE
Trigger: CTCTCCCCTGTTGATCCCTCATGCACAGCCACAGCG...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCAAACTTGGCAGCAGACTaGATGGAGGAAGGTGAAGTG +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSNLAAD*MEEGEV
Trigger: CACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTT...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CTAGGACTCGAGTCCGTGCAGCTTTGGCTCTCATCTTTTGGAATCAGCCACCAAGCAGATCTCGGCCAGTaGCAAGAAGGAGAAGACAAA +
Preference number: 4 (lower is better)
Translates to: LGLESVQLWLSSFGISHQADLGQ*QEGEDK
Trigger: TTTGTCTTCTCCTTCTTGGCACTGGCCGAGATCTGC...TTGGTGGCTGATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCGAGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000198801.10
CDS-3UTR GCA 90 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGTCTGGGAAGGCTCTaGAGATATGTTCAACAAACA +
Preference number: 4 (lower is better)
Translates to: CLCHSPFPRRPTCLDCSHSLGRL*RYVQQT
Trigger: TGTTTGTTGAACATATCTGCAGAGCCTTCCCAGACT...GTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCCTCTTCTGCATTGCCTaGTCTGACTTACAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGLFCIA*SDLQPD
Trigger: ATCAGGCTGTAAGTCAGAGCAGGCAATGCAGAAGAG...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCATTATCCTCTGGTTCCTaGTGGATCCTGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSLSSGS*WILILW
Trigger: CCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAA...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATATTTGTGAGACAGGATaGAGGTCCTGTTTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNICETG*RSCLWV
Trigger: TACCCACAAACAGGACCTGCATCCTGTCTCACAAAT...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp GGTAGGGTATTAAACCAAAGCTGTACTGGAAGACACCACGGCCATGAAAGAGTGGGCCCTTTAGCTTCCTaGAGGGACTCAGTGACCAAG +
Preference number: 4 (lower is better)
Translates to: GRVLNQSCTGRHHGHERVGPLAS*RDSVTK
Trigger: CTTGGTCACTGAGTCCCTGCAGGAAGCTAAAGGGCC...CACTCTTTCATGGCCGTGGTGTCTTCCAGTACAGCTTTGGTTTAATACCCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGGAAGAGTTGGGAATCTaGTCAAATAGGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKEELGI*SNRSFS
Trigger: GGAGAATGACCTATTTGACCAGATTCCCAACTCTTC...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATACTTACAGCCTGATATaGGTTGGATTTGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNTYSLI*VGFAGV
Trigger: GACTCCTGCAAATCCAACCCATATCAGGCTGTAAGT...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ATGCTTGCTCCTGGCTCCTCCCTTGCAGGGTCACCAGACCTGTTCGTGCCCCTTGTTTTTAAGTTTTGGTaGATTGTTTGCAAAGACGGC +
Preference number: 4 (lower is better)
Translates to: MLAPGSSLAGSPDLFVPLVFKFW*IVCKDG
Trigger: GCCGTCTTTGCAAACAATCCACCAAAACTTAAAAAC...AAGGGGCACGAACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAGCAAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCGGATATGGCATTCCATaGCATCCAACATCATGGGCA +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGGYGIP*HPTSWA
Trigger: TGCCCATGATGTTGGATGCCATGGAATGCCATATCC...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ACCCCAAGGAGGGAGAACAGCTCTGAAATGTACCCCAAATATCACTCTTCTAGACTGGAGGTGGAGGCCTaGGTTATCTCCCAGACCTTC +
Preference number: 4 (lower is better)
Translates to: TPRRENSSEMYPKYHSSRLEVEA*VISQTF
Trigger: GAAGGTCTGGGAGATAACCCAGGCCTCCACCTCCAG...TCTAGAAGAGTGATATTTGGGGTACATTTCAGAGCTGTTCTCCCTCCTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
3UTR CAA 72 bp TCCCTGCATGTGTCCACACCCTTTTGTAATATGACATaGCTGCTCCTCCCATCCAGAGGGGGATCCTATTCC +
Preference number: 4 (lower is better)
Translates to: SLHVSTPFCNMT*LLLPSRGGSYS
Trigger: GGAATAGGATCCCCCTCTGGATGGGAGGAGCAGCAATGTCATATTACAAAAGGGTGTGGACACATGCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp CAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGAAGATTGAAGACACCACGGCCATaGAAGAGTGGGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QKSWESGQIGHSPRRRRLKTPRP*KSGREM
Trigger: CATCTCCCTCCCACTCTTTCATGGCCGTGGTGTCTT...CAATCTTCTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTGTGAGACAATATAGCTaGGACAAAGAAATGCAAATG +
Preference number: 4 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTVRQYS*DKEMQM
Trigger: CATTTGCATTTCTTTGTCTCAGCTATATTGTCTCAC...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp ACCGATTCTGGATATAGCGTAACCAGGAGCCAGAAGAGTTGGGAATCTGGTCAACAGCAGAACTCCAAGTaGTGGTCAGCAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: TDSGYSVTRSQKSWESGQQQNSK*WSAGML
Trigger: CAACATCCCTGCTGACCAGCACTTGGAGTTCTGCTG...TTGACCAGATTCCCAACTCTTCTGGCTCCTGGTTACGCTATATCCAGAATCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCAGGCAGTAAGAATCCCTaGATGTGTCCACACCCTTTT +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSGSKNP*MCPHPF
Trigger: AAAAGGGTGTGGACACATGCAGGGATTCTTACTGCC...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GACTTGCTTCGACCAACAGAATGCAGTAGAAGAGATGCTTGTGAGGTGTGCAGCCAGAACTCCAAGTGCTaGTCAGCAGGGATGTTGAAC +
Preference number: 4 (lower is better)
Translates to: DLLRPTECSRRDACEVCSQNSKC*SAGMLN
Trigger: GTTCAACATCCCTGCTGACCAGCACTTGGAGTTCTG...GCTGCACACCTCACAAGCATCTCTTCTACTGCATTCTGTTGGTCGAAGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CACTCTGCCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTTGGCTCTCATCTTTTaGAATCAGCCACCAATGAAT +
Preference number: 4 (lower is better)
Translates to: HSACLCHSPFPRRPTCLDLALIF*NQPPMN
Trigger: ATTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAA...GTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ACCCCAAATATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTGTCAGCCACCTGGGCTaGAGGTGGAGGCCTGGGTTA +
Preference number: 4 (lower is better)
Translates to: TPNITLLDTTDLRSNASFVSHLG*RWRPGL
Trigger: TAACCCAGGCCTCCACCTCCAGCCCAGGTGGCTGAC...AAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATATTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTAGTCTGGGAAGGCTCTaGAGATATGTTCAACAAACA +
Preference number: 4 (lower is better)
Translates to: TWQQTEWRKVKWECLLLASLGRL*RYVQQT
Trigger: TGTTTGTTGAACATATCTGCAGAGCCTTCCCAGACT...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp AGGGTATTAAACCAAAGCTGTACTGGAAGACACCACGGCCATGAAAGAGTGGGACATGTTTCTCAAGGATaGTTCACCCCAAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RVLNQSCTGRHHGHERVGHVSQG*FTPRRE
Trigger: CTCCCTCCTTGGGGTGAAGCATCCTTGAGAAACATG...TCCCACTCTTTCATGGCCGTGGTGTCTTCCAGTACAGCTTTGGTTTAATACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp AGCTCTGAAATGTACCCCAAATATCACTCTTCTAGATACCACAGATCTCAGATCACTGCCAGGACTCCATaGGGGTGGAAGCCCGCAATG +
Preference number: 4 (lower is better)
Translates to: SSEMYPKYHSSRYHRSQITARTP*GWKPAM
Trigger: CATTGCGGGCTTCCACCCCCATGGAGTCCTGGCAGT...GATCTGAGATCTGTGGTATCTAGAAGAGTGATATTTGGGGTACATTTCAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCGAAGAGTTGGGAATCTaGTCAAATAGGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGEELGI*SNRSFS
Trigger: GGAGAATGACCTATTTGACCAGATTCCCAACTCTTC...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCAAGGAGCCAGAAGAGTTaGGAATCTGGTCAAATAGGT +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSRSQKS*ESGQIG
Trigger: ACCTATTTGACCAGATTCCCAACTCTTCTGGCTCCT...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCATTGAACTTAAGTTTGTaGGCCTCGAAGAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSLNLSL*ASKRLH
Trigger: GTGCAACCTCTTCGAGGCCCACAAACTTAAGTTCAA...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ATCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTTTGGCTCTCATCTTTTaGAATCAGCCACCAATGAAT +
Preference number: 4 (lower is better)
Translates to: ILGTHSGGTMVTQGIPGCLALIF*NQPPMN
Trigger: ATTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAA...ACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp AAATTATCCTCTGGTTCCTGCTGGATCCTGATCCTCTGGATTCAGACTGGTCCACCTCTGGATTCAGACTaGTCCAAACCCTATCCTAGG +
Preference number: 4 (lower is better)
Translates to: KLSSGSCWILILWIQTGPPLDSD*SKPYPR
Trigger: CCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGG...TGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TCGAGTCCGTGCAGCTTTGGCTCTCATCTTTTGGAATCAGCCACCAATGAATGTTCCTCTGGTTCCTGCTaGATCCTGATCCTCTGGATT +
Preference number: 4 (lower is better)
Translates to: SSPCSFGSHLLESATNECSSGSC*ILILWI
Trigger: AATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGA...ACATTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TTAGTTTTTAAGTTTTGGTGGATTGTTTGCAAAGACGGCAGTAAGAATCCCTGCGGAGGCCTACATGCCTaGACTGCAGCCACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LVFKFWWIVCKDGSKNPCGGLHA*TAATGP
Trigger: AGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCC...GCAGGGATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAACTTAAAAACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TCGAGTCCGTGCAGCTTTGGCTCTCATCTTTTGGAATCAGCCACCAATGAATGTGTCAACCAGAGGCACTaGGGAAGACTTCTTTGCACA +
Preference number: 4 (lower is better)
Translates to: SSPCSFGSHLLESATNECVNQRH*GRLLCT
Trigger: TGTGCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGAC...ACATTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATATGGGGACAACTGGTTaGATAAACTGTTCTAGTTTC +
Preference number: 4 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNMGTTG*INCSSF
Trigger: GAAACTAGAACAGTTTATCCAACCAGTTGTCCCCAT...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR TCA 90 bp AGCTCTGAAATGTACCCCAAATATCACTCTTCTAGATACCACAGATCTCAGATCTCCGCAGTAACAGCGTaGAGGATCCAGGCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SSEMYPKYHSSRYHRSQISAVTA*RIQAWH
Trigger: ATGCCAGGCCTGGATCCTTCACGCTGTTACTGCGGA...GATCTGAGATCTGTGGTATCTAGAAGAGTGATATTTGGGGTACATTTCAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp GACTTGCTTCGACCAACAGAATGCAGTAGAAGAGATGCTTGTGAGGTGTGCAGCCTATTCCTTACTCCTTaGATCTGCTGGGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: DLLRPTECSRRDACEVCSLFLTP*ICWVVT
Trigger: AGTCACAACCCAGCAGATTCAAGGAGTAAGGAATAG...GCTGCACACCTCACAAGCATCTCTTCTACTGCATTCTGTTGGTCGAAGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAAGTTCCTGCTGGATCCTaGTCCTCTGGATTCAGACTG +
Preference number: 4 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQVPAGS*SSGFRL
Trigger: CAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAAC...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACTTTTGGTGGATTGTTTaGAAAGACGGCAGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: GCGGGTESLEKPEETPVNFWWIV*KDGSKN
Trigger: ATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAA...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCAACAAAGAAATGCAAATaGTTCCGAGTGATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSTKKCK*FRVMGA
Trigger: TGCTCCCATCACTCGGAACCATTTGCATTTCTTTGT...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp GAGCCAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGAAGAGTTTCTTAGATCACTaGGTCTCCGTTGTGGAAACT +
Preference number: 4 (lower is better)
Translates to: EPEELGIWSNRSFSPKEKSFLDH*VSVVET
Trigger: AGTTTCCACAACGGAGACTCAGTGATCTAAGAAACT...CTTCTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp ATCCTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTTGGGGAAGACTTCTTTaGACAGATAAAATCAGTATT +
Preference number: 4 (lower is better)
Translates to: ILGTHSGGTMVTQGIPGCWGRLL*TDKISI
Trigger: AATACTGATTTTATCTGTGCAAAGAAGTCTTCCCCA...ACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp TGCTTCACCCCAAGGAGGGAGAACAGCTCTGAAATGTACCCCAAATATCACTCTAAAATCCTTGCCAATTaGCAACTGAACCCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: CFTPRRENSSEMYPKYHSKILAN*QLNPEC
Trigger: GCACTCTGGGTTCAGTTGGCAATTGGCAAGGATTTT...AGAGTGATATTTGGGGTACATTTCAGAGCTGTTCTCCCTCCTTGGGGTGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp TCGAGTCCGTGCAGCTTTGGCTCTCATCTTTTGGAATCAGCCACCAATGAATGTACTTACAGCCTGATATaGGTTGGATTTGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SSPCSFGSHLLESATNECTYSLI*VGFAGV
Trigger: GACTCCTGCAAATCCAACCCATATCAGGCTGTAAGT...ACATTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAACCTCTGGATTCAGACTaGTCCAAACCCTATCCTAGG +
Preference number: 4 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQPLDSD*SKPYPR
Trigger: CCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGG...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR TCA 90 bp TATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTGTGGAATACCAGCTCAGCAGTCTTaGCCAGCGAGATGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: YHSSRYHRSQIKCQLCGIPAQQS*PARWGN
Trigger: ATTTCCCCATCTCGCTGGTCAAGACTGCTGAGCTGG...TATTCCACAAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp ACCCCAAATATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTTTGCCAATTGCCAACTaGACCCAGAGTGCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TPNITLLDTTDLRSNASFLPIAN*TQSALP
Trigger: GGGAAGAGCACTCTGGGTTCAGTTGGCAATTGGCAA...AAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATATTTGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp TTATCCAGACAAGGGGGAGATAATGGGGAGGATATGGCATTCCATGGCATCCAAGGTGGAGAGTGCTTGTaGTTCAGGCTTTTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSRQGGDNGEDMAFHGIQGGECL*FRLLVF
Trigger: AAAAACTAAAAGCCTGAAGCACAAGCACTCTCCACC...TTGGATGCCATGGAATGCCATATCCTCCCCATTATCTCCCCCTTGTCTGGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp TTATCCAGACAAGGGGGAGATAATGGGGAGGATATGGCATTCCATGGCATCCAAGCTGAGACAAAGAAATaGAAATGGTTCCGAGTGATG +
Preference number: 4 (lower is better)
Translates to: LSRQGGDNGEDMAFHGIQAETKK*KWFRVM
Trigger: CATCACTCGGAACCATTTGCATTTCTTTGTCTCAGC...TTGGATGCCATGGAATGCCATATCCTCCCCATTATCTCCCCCTTGTCTGGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCTGGGGAAGACTTCTTTaGACAGATAAAATCAGTATT +
Preference number: 4 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGWGRLL*TDKISI
Trigger: AATACTGATTTTATCTGTGCAAAGAAGTCTTCCCCA...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TTAGTTTTTAAGTTTTGGTGGATTGTTTGCAAAGACGGCAGTAAGAATCCCTGCAGGCAGTGGGGAACTTaGCAGCAGACTGAATGGAGG +
Preference number: 4 (lower is better)
Translates to: LVFKFWWIVCKDGSKNPCRQWGT*QQTEWR
Trigger: CCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCT...GCAGGGATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAACTTAAAAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
3UTR CAA 72 bp CCTATTCCTTACTCCTTGAATCTGCTGGGTTGTGACTaGCTTCGACCAACAGAATGCAGTAGAAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: PIPYSLNLLGCD*LRPTECSRRDA
Trigger: AGCATCTCTTCTACTGCATTCTGTTGGTCGAAGCAAGTCACAACCCAGCAGATTCAAGGAGTAAGGAATAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp TTAGTTTTTAAGTTTTGGTGGATTGTTTGCAAAGACGGCAGTAAGAATCCCTGCCAGCAGAACTCCAAGTaGTGGTCAGCAGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LVFKFWWIVCKDGSKNPCQQNSK*WSAGML
Trigger: CAACATCCCTGCTGACCAGCACTTGGAGTTCTGCTG...GCAGGGATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAACTTAAAAACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CAAGTGCTGGTCAGCAGGGATGTTGAACTTAAGTTTGTGGGCCTCGAAGAGGTTTACCAAAATAGAATCTaGATTCGTCTCTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: QVLVSRDVELKFVGLEEVYQNRI*IRLCHL
Trigger: AAGATGGCAGAGACGAATGCAGATTCTATTTTGGTA...AACCTCTTCGAGGCCCACAAACTTAAGTTCAACATCCCTGCTGACCAGCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp TATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTGTGGAATAGGTTGCACAGCTCTTTaGTATAACGCTGGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: YHSSRYHRSQIKCQLCGIGCTAL*YNAGAA
Trigger: AGCTGCACCAGCGTTATATCAAAGAGCTGTGCAACC...TATTCCACAAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp TCGAGTCCGTGCAGCTTTGGCTCTCATCTTTTGGAATCAGCCACCAATGAATGTGTGAGACAATATAGCTaGGACAAAGAAATGCAAATG +
Preference number: 4 (lower is better)
Translates to: SSPCSFGSHLLESATNECVRQYS*DKEMQM
Trigger: CATTTGCATTTCTTTGTCTCAGCTATATTGTCTCAC...ACATTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp TTAGTTTTTAAGTTTTGGTGGATTGTTTGCAAAGACGGCAGTAAGAATCCCTGCGATATGGGTTGGATTTaGAGGAGTCTGGGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LVFKFWWIVCKDGSKNPCDMGWI*RSLGRL
Trigger: GAGCCTTCCCAGACTCCTGCAAATCCAACCCATATC...GCAGGGATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAACTTAAAAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAAGCTGAGACAAAGAAATaGAAATGGTTCCGAGTGATG +
Preference number: 4 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQAETKK*KWFRVM
Trigger: CATCACTCGGAACCATTTGCATTTCTTTGTCTCAGC...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTGTGGAATACAGAACTCCAAGTGCTaGTCAGCAGGGATGTTGAAC +
Preference number: 4 (lower is better)
Translates to: YHSSRYHRSQIKCQLCGIQNSKC*SAGMLN
Trigger: GTTCAACATCCCTGCTGACCAGCACTTGGAGTTCTG...TATTCCACAAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp TATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTGTGGAATATCAGTGACCAAGAAATaGAGCAGAGGTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: YHSSRYHRSQIKCQLCGISVTKK*SRGQPP
Trigger: AGGTGGCTGACCTCTGCTCCATTTCTTGGTCACTGA...TATTCCACAAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR GCA 90 bp TTAGTTTTTAAGTTTTGGTGGATTGTTTGCAAAGACGGCAGTAAGAATCCCTGCTCCTGGTTCAGGAACTaGTGCTTCCATTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LVFKFWWIVCKDGSKNPCSWFRN*CFHSSF
Trigger: GAAGGATGAATGGAAGCAGCAGTTCCTGAACCAGGA...GCAGGGATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAACTTAAAAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp CCAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGAAGATTAGATCTCAGATCAAATaGCAGCTTTGTGGAATATGT +
Preference number: 4 (lower is better)
Translates to: PEELGIWSNRSFSPKEKIRSQIK*QLCGIC
Trigger: ACATATTCCACAAAGCTGGCATTTGATCTGAGATCT...AATCTTCTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CCA 90 bp ACCCCAAATATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTAGGAGCCAGAAGAGTTaGGAATCTGGTCAAATAGGT +
Preference number: 4 (lower is better)
Translates to: TPNITLLDTTDLRSNASFRSQKS*ESGQIG
Trigger: ACCTATTTGACCAGATTCCCAACTCTTCTGGCTCCT...AAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATATTTGGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR TCA 90 bp TTAGTTTTTAAGTTTTGGTGGATTGTTTGCAAAGACGGCAGTAAGAATCCCTGCGTTCAGTTTTATTTGTaGGACAGGATGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LVFKFWWIVCKDGSKNPCVQFYL*DRMQVL
Trigger: CAGGACCTGCATCCTGTCTCACAAATAAAACTGAAC...GCAGGGATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAACTTAAAAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR GCA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAATTTTGGTGGATTGTTTaGAAAGACGGCAGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQFWWIV*KDGSKN
Trigger: ATTCTTACTGCCGTCTTTGCAAACAATCCACCAAAA...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CCA 90 bp TATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTGTGGAATAGAAGAGTTGGGAATCTaGTCAAATAGGTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: YHSSRYHRSQIKCQLCGIEELGI*SNRSFS
Trigger: GGAGAATGACCTATTTGACCAGATTCCCAACTCTTC...TATTCCACAAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS CCA 90 bp TGTACCTCGATGGGCTTCCCCACTGCAAGGCATAGAGGTGTGCAGTaGCCTAGGGTAGGCAAGGGACCCTCGGTGCAGGTGCCCACCCCC +
Preference number: 5 (lower is better)
Translates to: CTSMGFPTARHRGVQ*PRVGKGPSVQVPTP
Trigger: GGGGGTGGGCACCTGCACCGAGGGTCCCTTGCCTACCCTAGGCCACTGCACACCTCTATGCCTTGCAGTGGGGAAGCCCATCGAGGTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624180.1
CDS CCA 90 bp CGCAGTAACAGCGTGAAGGATCCAGGCCTGGCATCCAGGGCCTCCTaGGCACCCCCTACAATGATGCCCAGCAAGTTTCCGCCACCCTTC +
Preference number: 5 (lower is better)
Translates to: RSNSVKDPGLASRAS*APPTMMPSKFPPPF
Trigger: GAAGGGTGGCGGAAACTTGCTGGGCATCATTGTAGGGGGTGCCCAGGAGGCCCTGGATGCCAGGCCTGGATCCTTCACGCTGTTACTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000198801.10
ENST00000525093.5
ENST00000526712.1
CDS CCA 90 bp GGTTCACCTCCTCCTCCGAGGGATGCAGCGTCTTCTGTACCTCGATaGGCTTCCCCACTGCAAGGCATAGAGGTGTGCAGTGGCCTAGGG +
Preference number: 5 (lower is better)
Translates to: GSPPPPRDAASSVPR*ASPLQGIEVCSGLG
Trigger: CCCTAGGCCACTGCACACCTCTATGCCTTGCAGTGGGGAAGCCCATCGAGGTACAGAAGACGCTGCATCCCTCGGAGGAGGAGGTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624180.1
CDS-3UTR CAA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTCTCCTGGCTCCTCCCTaGCAGGGTCACCAGACCTGT +
Preference number: 5 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTLLAPP*QGHQTC
Trigger: ACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAG...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCCCACTCTGCCTGTCTTaGCCATTCTCCCTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSPLCLS*PFSLSQ
Trigger: CTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTGG...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp AGGGACTCAGTGACCAAGAAATGGAGCAGAGGTCAGCCACCTGGGCTGGAGGTGCCTTGGGCAGGTCCCTaGCAGGGCCACAACTTCCCA +
Preference number: 5 (lower is better)
Translates to: RDSVTKKWSRGQPPGLEVPWAGP*QGHNFP
Trigger: TGGGAAGTTGTGGCCCTGCAAGGGACCTGCCCAAGG...CACCTCCAGCCCAGGTGGCTGACCTCTGCTCCATTTCTTGGTCACTGAGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCGGAAGGCAGGTGAGATaGCTCAGACTGAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSGRQVR*LRLNSA
Trigger: GGCAGAGTTCAGTCTGAGCAATCTCACCTGCCTTCC...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS TCA 90 bp GGAAGACAGCAGCTTCCGGGGCATTCAAAGAGGAGACAAAGTCCCTaGGAGGGACTACGGCCAGCCCAGTGTCACTGGGAGCACGCGTTG +
Preference number: 5 (lower is better)
Translates to: GRQQLPGHSKRRQSP*EGLRPAQCHWEHAL
Trigger: CAACGCGTGCTCCCAGTGACACTGGGCTGGCCGTAGTCCCTCTCAGGGACTTTGTCTCCTCTTTGAATGCCCCGGAAGCTGCTGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR CAA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGGCCCCAGCTGACCCCTaGGTCTGGTCTCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVAPADP*VWSPLL
Trigger: CAGAAGAGGAGACCAGACCAAGGGGTCAGCTGGGGC...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGGCCCCAGCTGACCCCTaGGTCTGGTCTCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKAPADP*VWSPLL
Trigger: CAGAAGAGGAGACCAGACCAAGGGGTCAGCTGGGGC...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp CTCGGGACACACAGTGGTGGTACCATGGTCACACAGGGAATTCCAGGGTGTGTGCTCCTGGCTCCTCCCTaGCAGGGTCACCAGACCTGT +
Preference number: 5 (lower is better)
Translates to: LGTHSGGTMVTQGIPGCVLLAPP*QGHQTC
Trigger: ACAGGTCTGGTGACCCTGCAAGGGAGGAGCCAGGAG...CACACACCCTGGAATTCCCTGTGTGACCATGGTACCACCACTGTGTGTCCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp GCCTGGGTTATCTCCCAGACCTTCACAGCCCCATTCTCTGACCTTGGGCAGGTCGCTCTTCCCAGAGGCTaGATACCCGTGTGTCAGGGC +
Preference number: 5 (lower is better)
Translates to: AWVISQTFTAPFSDLGQVALPRG*IPVCQG
Trigger: GCCCTGACACACGGGTATCAAGCCTCTGGGAAGAGC...GACCTGCCCAAGGTCAGAGAATGGGGCTGTGAAGGTCTGGGAGATAACCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp CTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGTTGGCCTCCCGCTCCTGCCTCTaGTCTGTGGCCACTCTGAAC +
Preference number: 5 (lower is better)
Translates to: LQEVFSAQHLLLGSLMLASRSCL*SVATLN
Trigger: GTTCAGAGTGGCCACAGACAAGAGGCAGGAGCGGGA...GGCCAACATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS CCA 90 bp AGCACAGCACCTCCTGCTGGGCTCCCTAATGTTGGCCCTGCCCTTTaGGCTCAGCAGAACTCCAAGTGCTGGTCAGCAGGGATGTTGAAC +
Preference number: 5 (lower is better)
Translates to: STAPPAGLPNVGPAL*AQQNSKCWSAGMLN
Trigger: GTTCAACATCCCTGCTGACCAGCACTTGGAGTTCTGCTGAGCCCAAAGGGCAGGGCCAACATTAGGGAGCCCAGCAGGAGGTGCTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198801.10
ENST00000526712.1
ENST00000624180.1
CDS-3UTR CAA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCACCTGTTCGTGCCCCTaGACCAGCAATGGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCTCSCP*TSNGPH
Trigger: GTGGGGGCCATTGCTGGTCAAGGGGCACGAACAGGT...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATACCTGTTCGTGCCCCTaGACCAGCAATGGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNTCSCP*TSNGPH
Trigger: GTGGGGGCCATTGCTGGTCAAGGGGCACGAACAGGT...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS TCA 90 bp CCTTGCCAATTGCCAACTGAACCCAGAGTGCTCTTCCCAGAGGCTTaGTACCCGTGTGTCAGGGCGAGCCTGACGAAGCCCTTTCGGTTC +
Preference number: 5 (lower is better)
Translates to: PCQLPTEPRVLFPEA*YPCVRASLTKPFRF
Trigger: GAACCGAAAGGGCTTCGTCAGGCTCGCCCTGACACACGGGTATCAAGCCTCTGGGAAGAGCACTCTGGGTTCAGTTGGCAATTGGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp CACTCTGCCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACCTAGAGGCAGGGGCATaGGCGCAGCATTTACCTGGA +
Preference number: 5 (lower is better)
Translates to: HSACLCHSPFPRRPTCLDLEAGA*AQHLPG
Trigger: TCCAGGTAAATGCTGCGCCAATGCCCCTGCCTCTAG...GTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS GCA 90 bp GCCAGTGCCAAGAAGGAGAAGACAAACTGTAGGACAGCAAGTGTCTaGAGCCTGCGCTCCCACGGCATAAACAAGGGCGCGAACTCTACC +
Preference number: 5 (lower is better)
Translates to: ASAKKEKTNCRTASV*SLRSHGINKGANST
Trigger: GGTAGAGTTCGCGCCCTTGTTTATGCCGTGGGAGCGCAGGCTGCAGACACTTGCTGTCCTACAGTTTGTCTTCTCCTTCTTGGCACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000525093.5
CDS-3UTR CAA 90 bp GTTGGGCTCAGGCAGTGGGGAACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTCCAGCTCAGCAGTCTaGACCAGCGAGATGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VGLRQWGTWQQTEWRKVKSSSAV*TSEMGK
Trigger: TTTCCCCATCTCGCTGGTCAAGACTGCTGAGCTGGA...CTTCACCTTCCTCCATTCAGTCTGCTGCCAAGTTCCCCACTGCCTGAGCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp ACTTGGCAGCAGACTGAATGGAGGAAGGTGAAGTGGGAATGCTTGCTCCTGGCTCTCTCAGTGCACAGGTaGGCAAAGGCTCCGACTGCC +
Preference number: 5 (lower is better)
Translates to: TWQQTEWRKVKWECLLLALSVHR*AKAPTA
Trigger: GGCAGTCGGAGCCTTTGCCAACCTGTGCACTGAGAG...AGCCAGGAGCAAGCATTCCCACTTCACCTTCCTCCATTCAGTCTGCTGCCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp CTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACAGGCCCTCCTTCCATGTTGAACTTAAGTTaGTGGGCCTCGAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LPFPGGLHAWTAATGPPSMLNLS*WASKRL
Trigger: CAACCTCTTCGAGGCCCACAAACTTAAGTTCAACAT...GGAAGGAGGGCCTGTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCTGTTGGCCCTGCCCTTaGGGCTCAGCAGAACTCCAA +
Preference number: 5 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCCWPCP*GSAELQ
Trigger: TTGGAGTTCTGCTGAGCCCAAAGGGCAGGGCCAACA...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp CTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATGTTGGCCGTCTCCTCTTCTGCATaGCCTGCTCTGACTTACAGC +
Preference number: 5 (lower is better)
Translates to: LQEVFSAQHLLLGSLMLAVSSSA*PALTYS
Trigger: GCTGTAAGTCAGAGCAGGCAATGCAGAAGAGGAGAC...GGCCAACATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp CCTCCTCCCCAGGGTGCTAAGGGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGATGGCGCGGTCAGCTTaGTGTTTTAGACAGCTCGCT +
Preference number: 5 (lower is better)
Translates to: PPPQGAKGCGGGTESLEKMARSA*CFRQLA
Trigger: AGCGAGCTGTCTAAAACACAAAGCTGACCGCGCCAT...CTTCTCCAGACTTTCTGTTCCTCCACCACAGCCCTTAGCACCCTGGGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCGTGAAGTGGGAATGCTaGCTCCTGGCTCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCVKWEC*LLAPPL
Trigger: CAAGGGAGGAGCCAGGAGCAAGCATTCCCACTTCAC...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACATGTTCCGTCTTCCGTaGACCCCTCCAGATCCACTC +
Preference number: 5 (lower is better)
Translates to: CLCHSPFPRRPTCLDCSHMFRLP*TPPDPL
Trigger: GAGTGGATCTGGAGGGGTCAACGGAAGACGGAACAT...GTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp GAGCCAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGAAGCCCCGAAGGAGAAGATaGGCACCAGGGGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EPEELGIWSNRSFSPKEKPRRRR*APGVPW
Trigger: CCAGGGCACCCCTGGTGCCAATCTTCTCCTTCGGGG...CTTCTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp GGCTGTGGTGGAGGAACAGAAAGTCTGGAGAAGCCAGAGGAAACCCCTGTCAACTCCAGCTCAGCAGTCTaGACCAGCGAGATGGGGAAA +
Preference number: 5 (lower is better)
Translates to: GCGGGTESLEKPEETPVNSSSAV*TSEMGK
Trigger: TTTCCCCATCTCGCTGGTCAAGACTGCTGAGCTGGA...GTTGACAGGGGTTTCCTCTGGCTTCTCCAGACTTTCTGTTCCTCCACCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp AGGGAGATAGGGCAGCGATGCAAAGCTGAGCTGGGATCCTCGGGACACACAGTGTGGTCAGCAGGGATGTaGAACTTAAGTTTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: REIGQRCKAELGSSGHTVWSAGM*NLSLWA
Trigger: GGCCCACAAACTTAAGTTCAACATCCCTGCTGACCA...CACTGTGTGTCCCGAGGATCCCAGCTCAGCTTTGCATCGCTGCCCTATCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp CCTGCTCTGACTTACAGCCTGATATGGGTTGGATTTGCAGGAGTCTGGGAAGGCCTAGAGGCAGGGGCATaGGCGCAGCATTTACCTGGA +
Preference number: 5 (lower is better)
Translates to: PALTYSLIWVGFAGVWEGLEAGA*AQHLPG
Trigger: TCCAGGTAAATGCTGCGCCAATGCCCCTGCCTCTAG...GCCTTCCCAGACTCCTGCAAATCCAACCCATATCAGGCTGTAAGTCAGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS GCA 90 bp CTCCCTAATGTTGGCCCTGCCCTTTGGGCTCAGCAGAACTCCAAGTaGTGGTCAGCAGGGATGTTGAACTTAAGTTTGTGGGCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: LPNVGPALWAQQNSK*WSAGMLNLSLWASK
Trigger: CTTCGAGGCCCACAAACTTAAGTTCAACATCCCTGCTGACCAGCACTTGGAGTTCTGCTGAGCCCAAAGGGCAGGGCCAACATTAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198801.10
ENST00000526712.1
ENST00000624180.1
CDS CCA 90 bp CCTAATGTTGGCCCTGCCCTTTGGGCTCAGCAGAACTCCAAGTGCTaGTCAGCAGGGATGTTGAACTTAAGTTTGTGGGCCTCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PNVGPALWAQQNSKC*SAGMLNLSLWASKR
Trigger: CCTCTTCGAGGCCCACAAACTTAAGTTCAACATCCCTGCTGACCAGCACTTGGAGTTCTGCTGAGCCCAAAGGGCAGGGCCAACATTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198801.10
ENST00000526712.1
ENST00000624180.1
CDS-3UTR CAA 90 bp TGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTGCAGCCACGACTTCCCCATAACTTaGGGCACAGTCCAAGTAGCT +
Preference number: 5 (lower is better)
Translates to: CLCHSPFPRRPTCLDCSHDFPIT*GTVQVA
Trigger: AGCTACTTGGACTGTGCCCAAAGTTATGGGGAAGTC...GTGGCTGCAGTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR CAA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATCAGGAGCCAGAAGAGTaGGGAATCTGGTCAAATAGG +
Preference number: 5 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNQEPEE*GIWSNR
Trigger: CCTATTTGACCAGATTCCCAACTCTTCTGGCTCCTG...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp GACTTGCTTCGACCAACAGAATGCAGTAGAAGAGATGCTTGTGAGGTGTGCAGCTGTTGGCCCTGCCCTTaGGGCTCAGCAGAACTCCAA +
Preference number: 5 (lower is better)
Translates to: DLLRPTECSRRDACEVCSCWPCP*GSAELQ
Trigger: TTGGAGTTCTGCTGAGCCCAAAGGGCAGGGCCAACA...GCTGCACACCTCACAAGCATCTCTTCTACTGCATTCTGTTGGTCGAAGCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp CAAACACCTCCAGGAAGTCTTCTCAGCACAGCACCTCCTGCTGGGCTCCCTAATCGAGTCCGTGCAGCTTaGGCTCTCATCTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: QTPPGSLLSTAPPAGLPNRVRAA*ALIFWN
Trigger: ATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCG...ATTAGGGAGCCCAGCAGGAGGTGCTGTGCTGAGAAGACTTCCTGGAGGTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTTCTAGTTTCCATCTTTaGGGATCTCAGAGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTSSFHL*GSQSKG
Trigger: CCCTTTGCTCTGAGATCCCAAAAGATGGAAACTAGA...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS GCA 90 bp CAGAGCAAAGGGAGACCCTTTCCTGCTCTCTTTCTGTTCATCCTCTaGCCCATTTTCCCAGAGATAAATCCAGCCAGGTGCCTCCCCTTA +
Preference number: 5 (lower is better)
Translates to: QSKGRPFPALFLFIL*PIFPEINPARCLPL
Trigger: TAAGGGGAGGCACCTGGCTGGATTTATCTCTGGGAAAATGGGGCAGAGGATGAACAGAAAGAGAGCAGGAAAGGGTCTCCCTTTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR CAA 90 bp CTCGGGCCTGGAAGTGGACATGTTCCGTCTTCCGTTGACCCCTCCAGATCCACTTTTGGCTCTCATCTTTaGGAATCAGCCACCAATGAA +
Preference number: 5 (lower is better)
Translates to: LGPGSGHVPSSVDPSRSTFGSHL*ESATNE
Trigger: TTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAAA...AGTGGATCTGGAGGGGTCAACGGAAGACGGAACATGTCCACTTCCAGGCCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp AAATTATCCTCTGGTTCCTGCTGGATCCTGATCCTCTGGATTCAGACTGGTCCAGTGAAGTGGGAATGCTaGCTCCTGGCTCCTCCCTTG +
Preference number: 5 (lower is better)
Translates to: KLSSGSCWILILWIQTGPVKWEC*LLAPPL
Trigger: CAAGGGAGGAGCCAGGAGCAAGCATTCCCACTTCAC...TGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS TCA 90 bp ACAATGATGCCCAGCAAGTTTCCGCCACCCTTCCTGTTCAGAATGTaGGCAGCACTCTCCTTTTCTGATGTGACCAACCCTGCAGACATG +
Preference number: 5 (lower is better)
Translates to: TMMPSKFPPPFLFRM*AALSFSDVTNPADM
Trigger: CATGTCTGCAGGGTTGGTCACATCAGAAAAGGAGAGTGCTGCTCACATTCTGAACAGGAAGGGTGGCGGAAACTTGCTGGGCATCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000198801.10
ENST00000525093.5
ENST00000526712.1
CDS-3UTR CAA 90 bp TGCTTCACCCCAAGGAGGGAGAACAGCTCTGAAATGTACCCCAAATATCACTCTTCCAGCTCAGCAGTCTaGACCAGCGAGATGGGGAAA +
Preference number: 5 (lower is better)
Translates to: CFTPRRENSSEMYPKYHSSSSAV*TSEMGK
Trigger: TTTCCCCATCTCGCTGGTCAAGACTGCTGAGCTGGA...AGAGTGATATTTGGGGTACATTTCAGAGCTGTTCTCCCTCCTTGGGGTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp GATCCTCTGGATTCAGACTGGTCCAAACCCTATCCTAGGAGCAATGGAGGGTCACAGGAGCCAGAAGAGTaGGGAATCTGGTCAAATAGG +
Preference number: 5 (lower is better)
Translates to: DPLDSDWSKPYPRSNGGSQEPEE*GIWSNR
Trigger: CCTATTTGACCAGATTCCCAACTCTTCTGGCTCCTG...TGACCCTCCATTGCTCCTAGGATAGGGTTTGGACCAGTCTGAATCCAGAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp GAGAAGCCAGAGGAAACCCCTGTCAACCAGAGGCACTGGGGAAGACTTCTTTGCATGTTGAACTTAAGTTaGTGGGCCTCGAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: EKPEETPVNQRHWGRLLCMLNLS*WASKRL
Trigger: CAACCTCTTCGAGGCCCACAAACTTAAGTTCAACAT...GCAAAGAAGTCTTCCCCAGTGCCTCTGGTTGACAGGGGTTTCCTCTGGCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp GACTTGCTTCGACCAACAGAATGCAGTAGAAGAGATGCTTGTGAGGTGTGCAGCGTCTCCTCTTCTGCATaGCCTGCTCTGACTTACAGC +
Preference number: 5 (lower is better)
Translates to: DLLRPTECSRRDACEVCSVSSSA*PALTYS
Trigger: GCTGTAAGTCAGAGCAGGCAATGCAGAAGAGGAGAC...GCTGCACACCTCACAAGCATCTCTTCTACTGCATTCTGTTGGTCGAAGCAAGTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp TTATCCAGACAAGGGGGAGATAATGGGGAGGATATGGCATTCCATGGCATCCAACCACTCTGCCTGTCTTaGCCATTCTCCCTTTCCCAG +
Preference number: 5 (lower is better)
Translates to: LSRQGGDNGEDMAFHGIQPLCLS*PFSLSQ
Trigger: CTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTGG...TTGGATGCCATGGAATGCCATATCCTCCCCATTATCTCCCCCTTGTCTGGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp AAATTATCCTCTGGTTCCTGCTGGATCCTGATCCTCTGGATTCAGACTGGTCCAATGTTCCGTCTTCCGTaGACCCCTCCAGATCCACTC +
Preference number: 5 (lower is better)
Translates to: KLSSGSCWILILWIQTGPMFRLP*TPPDPL
Trigger: GAGTGGATCTGGAGGGGTCAACGGAAGACGGAACAT...TGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS TCA 90 bp CTCTGCCATCTTCCCACCAAAATAAAATCCTTGCCAATTGCCAACTaGACCCAGAGTGCTCTTCCCAGAGGCTTGATACCCGTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: LCHLPTKIKSLPIAN*TQSALPRGLIPVCQ
Trigger: CTGACACACGGGTATCAAGCCTCTGGGAAGAGCACTCTGGGTTCAGTTGGCAATTGGCAAGGATTTTATTTTGGTGGGAAGATGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp GAGCCAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGAAGTGGTCAGCAGGGATGTaGAACTTAAGTTTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: EPEELGIWSNRSFSPKEKWSAGM*NLSLWA
Trigger: GGCCCACAAACTTAAGTTCAACATCCCTGCTGACCA...CTTCTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp CACTCTGCCTGTCTTTGCCATTCTCCCTTTCCCAGGAGGCCTACATGCCTGGACTTAAGTTTTGGTGGATaGTTTGCAAAGACGGCAGTA +
Preference number: 5 (lower is better)
Translates to: HSACLCHSPFPRRPTCLDLSFGG*FAKTAV
Trigger: TACTGCCGTCTTTGCAAACAATCCACCAAAACTTAA...GTCCAGGCATGTAGGCCTCCTGGGAAAGGGAGAATGGCAAAGACAGGCAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS GCA 90 bp CATTCGTCTCTGCCATCTTCCCACCAAAATAAAATCCTTGCCAATTaGCAACTGAACCCAGAGTGCTCTTCCCAGAGGCTTGATACCCGT +
Preference number: 5 (lower is better)
Translates to: HSSLPSSHQNKILAN*QLNPECSSQRLDTR
Trigger: ACGGGTATCAAGCCTCTGGGAAGAGCACTCTGGGTTCAGTTGGCAATTGGCAAGGATTTTATTTTGGTGGGAAGATGGCAGAGACGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp ACCCCAAATATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTCTCTCAGTGCACAGGTaGGCAAAGGCTCCGACTGCC +
Preference number: 5 (lower is better)
Translates to: TPNITLLDTTDLRSNASFLSVHR*AKAPTA
Trigger: GGCAGTCGGAGCCTTTGCCAACCTGTGCACTGAGAG...AAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATATTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp TGCTTCACCCCAAGGAGGGAGAACAGCTCTGAAATGTACCCCAAATATCACTCTCAGGAGCCAGAAGAGTaGGGAATCTGGTCAAATAGG +
Preference number: 5 (lower is better)
Translates to: CFTPRRENSSEMYPKYHSQEPEE*GIWSNR
Trigger: CCTATTTGACCAGATTCCCAACTCTTCTGGCTCCTG...AGAGTGATATTTGGGGTACATTTCAGAGCTGTTCTCCCTCCTTGGGGTGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp AAATTATCCTCTGGTTCCTGCTGGATCCTGATCCTCTGGATTCAGACTGGTCCATGGTCAGCAGGGATGTaGAACTTAAGTTTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: KLSSGSCWILILWIQTGPWSAGM*NLSLWA
Trigger: GGCCCACAAACTTAAGTTCAACATCCCTGCTGACCA...TGGACCAGTCTGAATCCAGAGGATCAGGATCCAGCAGGAACCAGAGGATAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp TCGAGTCCGTGCAGCTTTGGCTCTCATCTTTTGGAATCAGCCACCAATGAATGTCGAGTCCGTGCAGCTTaGGCTCTCATCTTTTGGAAT +
Preference number: 5 (lower is better)
Translates to: SSPCSFGSHLLESATNECRVRAA*ALIFWN
Trigger: ATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCG...ACATTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAAAGCTGCACGGACTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp TTATCCAGACAAGGGGGAGATAATGGGGAGGATATGGCATTCCATGGCATCCAATTTGGCTCTCATCTTTaGGAATCAGCCACCAATGAA +
Preference number: 5 (lower is better)
Translates to: LSRQGGDNGEDMAFHGIQFGSHL*ESATNE
Trigger: TTCATTGGTGGCTGATTCCAAAAGATGAGAGCCAAA...TTGGATGCCATGGAATGCCATATCCTCCCCATTATCTCCCCCTTGTCTGGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp GACTTGCTTCGACCAACAGAATGCAGTAGAAGAGATGCTTGTGAGGTGTGCAGCTTAAGTTTTGGTGGATaGTTTGCAAAGACGGCAGTA +
Preference number: 5 (lower is better)
Translates to: DLLRPTECSRRDACEVCSLSFGG*FAKTAV
Trigger: TACTGCCGTCTTTGCAAACAATCCACCAAAACTTAA...GCTGCACACCTCACAAGCATCTCTTCTACTGCATTCTGTTGGTCGAAGCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000526712.1
CDS-3UTR CAA 90 bp CAGAAGAGTTGGGAATCTGGTCAAATAGGTCATTCTCCCCGAAGGAGAAGATTGGATCAAATGCCAGCTTaGTGGAATATGTTCATTGCC +
Preference number: 5 (lower is better)
Translates to: QKSWESGQIGHSPRRRRLDQMPA*WNMFIA
Trigger: GGCAATGAACATATTCCACAAAGCTGGCATTTGATC...CAATCTTCTCCTTCGGGGAGAATGACCTATTTGACCAGATTCCCAACTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS-3UTR CAA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAACCCCAGGAGAGTTGTTaGTACTCATTAAGTGCTCAA +
Preference number: 5 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQPQESC*YSLSAQ
Trigger: TTGAGCACTTAATGAGTACAAACAACTCTCCTGGGG...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR CAA 90 bp ATATGGCATTCCATGGCATCCAACATCATGGGCAAAAACTCAGAGGTGAGACAATTCTCCCCAGGAGAGTaGTTTGTACTCATTAAGTGC +
Preference number: 5 (lower is better)
Translates to: IWHSMASNIMGKNSEVRQFSPGE*FVLIKC
Trigger: GCACTTAATGAGTACAAACAACTCTCCTGGGGAGAA...TTGTCTCACCTCTGAGTTTTTGCCCATGATGTTGGATGCCATGGAATGCCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR CAA 90 bp TATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTGTGGAATAATGTTGAACTTAAGTTaGTGGGCCTCGAAGAGGTTG +
Preference number: 5 (lower is better)
Translates to: YHSSRYHRSQIKCQLCGIMLNLS*WASKRL
Trigger: CAACCTCTTCGAGGCCCACAAACTTAAGTTCAACAT...TATTCCACAAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS GCA 90 bp TACCCCAAATATCACTCTTCTAGATACCACAGATCTCAGATCAAATaGCAGCTTTGTGGAATATGTTCATTGCCACCTAGTTTCTTAGAT +
Preference number: 5 (lower is better)
Translates to: YPKYHSSRYHRSQIK*QLCGICSLPPSFLD
Trigger: ATCTAAGAAACTAGGTGGCAATGAACATATTCCACAAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATATTTGGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS CCA 90 bp AGTTGTTTGTACTCATTAAGTGCTCAATCAATGGGGACAACTGGTTaGATAAACTGTTCTAGTTTCCATCTTTTGGGATCTCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: SCLYSLSAQSMGTTG*INCSSFHLLGSQSK
Trigger: TTTGCTCTGAGATCCCAAAAGATGGAAACTAGAACAGTTTATCCAACCAGTTGTCCCCATTGATTGAGCACTTAATGAGTACAAACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS-3UTR CAA 90 bp TATCACTCTTCTAGATACCACAGATCTCAGATCAAATGCCAGCTTTGTGGAATATGTGGAATATGTTCATaGCCACCTAGTTTCTTAGAT +
Preference number: 5 (lower is better)
Translates to: YHSSRYHRSQIKCQLCGICGICS*PPSFLD
Trigger: ATCTAAGAAACTAGGTGGCAATGAACATATTCCACA...TATTCCACAAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS GCA 72 bp CGCTGGTGCAGCTGGTTCACCTCCTCCTCCGAGGGATaGAGCGTCTTCTGTACCTCGATGGGCTTCCCCACT +
Preference number: 6 (lower is better)
Translates to: RWCSWFTSSSEG*SVFCTSMGFPT
Trigger: AGTGGGGAAGCCCATCGAGGTACAGAAGACGCTGCATCCCTCGGAGGAGGAGGTGAACCAGCTGCACCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624180.1
CDS CCA 72 bp AGCGTGAAGGATCCAGGCCTGGCATCCAGGGCCTCCTaGGCACCCCCTACAATGATGCCCAGCAAGTTTCCG +
Preference number: 6 (lower is better)
Translates to: SVKDPGLASRAS*APPTMMPSKFP
Trigger: CGGAAACTTGCTGGGCATCATTGTAGGGGGTGCCCAGGAGGCCCTGGATGCCAGGCCTGGATCCTTCACGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000198801.10
ENST00000525093.5
ENST00000526712.1
CDS TCA 72 bp TTGCCAACTGAACCCAGAGTGCTCTTCCCAGAGGCTTaGTACCCGTGTGTCAGGGCGAGCCTGACGAAGCCC +
Preference number: 6 (lower is better)
Translates to: LPTEPRVLFPEA*YPCVRASLTKP
Trigger: GGGCTTCGTCAGGCTCGCCCTGACACACGGGTATCAAGCCTCTGGGAAGAGCACTCTGGGTTCAGTTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS TCA 72 bp CAGCTTCCGGGGCATTCAAAGAGGAGACAAAGTCCCTaGGAGGGACTACGGCCAGCCCAGTGTCACTGGGAG +
Preference number: 6 (lower is better)
Translates to: QLPGHSKRRQSP*EGLRPAQCHWE
Trigger: CTCCCAGTGACACTGGGCTGGCCGTAGTCCCTCTCAGGGACTTTGTCTCCTCTTTGAATGCCCCGGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS CCA 72 bp CCTCCTCCGAGGGATGCAGCGTCTTCTGTACCTCGATaGGCTTCCCCACTGCAAGGCATAGAGGTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: PPPRDAASSVPR*ASPLQGIEVCS
Trigger: ACTGCACACCTCTATGCCTTGCAGTGGGGAAGCCCATCGAGGTACAGAAGACGCTGCATCCCTCGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624180.1
CDS GCA 72 bp CCCTCGGTGCAGGTGCCCACCCCCATGGTTCATCCCTaGAGAAAAGTGCTCTTACTCCATTCCTTCCAACCC +
Preference number: 6 (lower is better)
Translates to: PSVQVPTPMVHP*RKVLLLHSFQP
Trigger: GGGTTGGAAGGAATGGAGTAAGAGCACTTTTCTGCAGGGATGAACCATGGGGGTGGGCACCTGCACCGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624180.1
CDS CAA 72 bp GGACTACGGCCAGCCCAGTGTCACTGGGAGCACGCGTaGAGCCTAGGTAGGCCTAACTCCAAAGCTCACTTT +
Preference number: 6 (lower is better)
Translates to: GLRPAQCHWEHA*SLGRPNSKAHF
Trigger: AAAGTGAGCTTTGGAGTTAGGCCTACCTAGGCTCAACGCGTGCTCCCAGTGACACTGGGCTGGCCGTAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS CCA 72 bp GGCCCTGCCCTTTGGGCTCAGCAGAACTCCAAGTGCTaGTCAGCAGGGATGTTGAACTTAAGTTTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: GPALWAQQNSKC*SAGMLNLSLWA
Trigger: GGCCCACAAACTTAAGTTCAACATCCCTGCTGACCAGCACTTGGAGTTCTGCTGAGCCCAAAGGGCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198801.10
ENST00000526712.1
ENST00000624180.1
CDS GCA 72 bp AAGAAGGAGAAGACAAACTGTAGGACAGCAAGTGTCTaGAGCCTGCGCTCCCACGGCATAAACAAGGGCGCG +
Preference number: 6 (lower is better)
Translates to: KKEKTNCRTASV*SLRSHGINKGA
Trigger: CGCGCCCTTGTTTATGCCGTGGGAGCGCAGGCTGCAGACACTTGCTGTCCTACAGTTTGTCTTCTCCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000198801.10
ENST00000525093.5
CDS CAA 90 bp GCCCTTTGGGCTCAGCAGAACTCCAAGTGCTGGTCAGCAGGGATGTaGAACTTAAGTTTGTGGGCCTCGAAGAGGTTGCACAGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: ALWAQQNSKCWSAGM*NLSLWASKRLHSSL
Trigger: CAAAGAGCTGTGCAACCTCTTCGAGGCCCACAAACTTAAGTTCAACATCCCTGCTGACCAGCACTTGGAGTTCTGCTGAGCCCAAAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000198801.10
ENST00000526712.1
ENST00000624180.1
CDS TCA 72 bp CTTCCCACCAAAATAAAATCCTTGCCAATTGCCAACTaGACCCAGAGTGCTCTTCCCAGAGGCTTGATACCC +
Preference number: 6 (lower is better)
Translates to: LPTKIKSLPIAN*TQSALPRGLIP
Trigger: GGGTATCAAGCCTCTGGGAAGAGCACTCTGGGTTCAGTTGGCAATTGGCAAGGATTTTATTTTGGTGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS GCA 72 bp CTGCCATCTTCCCACCAAAATAAAATCCTTGCCAATTaGCAACTGAACCCAGAGTGCTCTTCCCAGAGGCTT +
Preference number: 6 (lower is better)
Translates to: LPSSHQNKILAN*QLNPECSSQRL
Trigger: AAGCCTCTGGGAAGAGCACTCTGGGTTCAGTTGGCAATTGGCAAGGATTTTATTTTGGTGGGAAGATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS CAA 90 bp TCAATGGGGACAACTGGTTGGATAAACTGTTCTAGTTTCCATCTTTaGGGATCTCAGAGCAAAGGGAGACCCTTTCCTGCTCTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: SMGTTGWINCSSFHL*GSQSKGRPFPALFL
Trigger: CAGAAAGAGAGCAGGAAAGGGTCTCCCTTTGCTCTGAGATCCCAAAAGATGGAAACTAGAACAGTTTATCCAACCAGTTGTCCCCATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS CAA 72 bp ACAACTGGTTGGATAAACTGTTCTAGTTTCCATCTTTaGGGATCTCAGAGCAAAGGGAGACCCTTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: TTGWINCSSFHL*GSQSKGRPFPA
Trigger: AGCAGGAAAGGGTCTCCCTTTGCTCTGAGATCCCAAAAGATGGAAACTAGAACAGTTTATCCAACCAGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526712.1
CDS TCA 72 bp GGAATATGTTCATTGCCACCTAGTTTCTTAGATCACTaGGTCTCCGTTGTGGAAACTTTTCTAGGTATTTGG +
Preference number: 6 (lower is better)
Translates to: GICSLPPSFLDH*VSVVETFLGIW
Trigger: CCAAATACCTAGAAAAGTTTCCACAACGGAGACTCAGTGATCTAAGAAACTAGGTGGCAATGAACATATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS GCA 72 bp TATCACTCTTCTAGATACCACAGATCTCAGATCAAATaGCAGCTTTGTGGAATATGTTCATTGCCACCTAGT +
Preference number: 6 (lower is better)
Translates to: YHSSRYHRSQIK*QLCGICSLPPS
Trigger: ACTAGGTGGCAATGAACATATTCCACAAAGCTGGCATTTGATCTGAGATCTGTGGTATCTAGAAGAGTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525093.5
CDS CCA 72 bp TACTCATTAAGTGCTCAATCAATGGGGACAACTGGTTaGATAAACTGTTCTAGTTTCCATCTTTTGGGATCT +
Preference number: 6 (lower is better)
Translates to: YSLSAQSMGTTG*INCSSFHLLGS
Trigger: AGATCCCAAAAGATGGAAACTAGAACAGTTTATCCAACCAGTTGTCCCCATTGATTGAGCACTTAATGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526712.1