RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MOBP (Homo sapiens)

Ensembl gene IDs: ENSG00000168314

Ensembl transcript IDs: ENST00000311042.10, ENST00000383754.7, ENST00000415443.5, ENST00000420739.5, ENST00000424090.5, ENST00000428261.5, ENST00000436143.6, ENST00000441980.6, ENST00000442631.5, ENST00000447324.5, ENST00000451925.5, ENST00000452959.6, ENST00000479860.1, ENST00000682069.1

Found 676 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATaGCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTG +
Preference number: 1 (lower is better)
Translates to: MTSSKYSRQAALRPP*HGDHEHQQLPHQQV
Trigger: CACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
3UTR TCA 90 bp AAGGCCAGGCCCCTGAAGGGGGTGTGTCAGCATACAGTCATCTCATaGTCAGCTTCAGTGGTCAGGCTCCTCAGGGACTTGGAGAAGTCC +
Preference number: 1 (lower is better)
Translates to: KARPLKGVCQHTVIS*SASVVRLLRDLEKS
Trigger: GGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAGCTGATCATGAGATGACTGTATGCTGACACACCCCCTTCAGGGGCCTGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR GCA 90 bp TTCAGATGGGCTGAGCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTaGTCTCACCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTC +
Preference number: 1 (lower is better)
Translates to: FRWAEQGSKAVPSRT*SHPSWARRRCSKSL
Trigger: GAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGCTCAGCCCATCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 90 bp GTTGTGCCCACTCAAGGACACAGAGCCATGGCCTTGTTGGATCTTTaGGCATCCGACTGTGCTTGGCCACACCAGCTCCTAGCACAAGAC +
Preference number: 1 (lower is better)
Translates to: VVPTQGHRAMALLDL*ASDCAWPHQLLAQD
Trigger: GTCTTGTGCTAGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCTTGAGTGGGCACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 90 bp CACACACACACACACACGCACACACCAGTCCACAGGAGCACAAGGTaGTCTAAGGATCCTCAACTTGACCCAGGGGAAAACTCCCTCCCC +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTPVHRSTR*SKDPQLDPGENSLP
Trigger: GGGGAGGGAGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGACTGGTGTGTGCGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR TCA 90 bp CCGTTGCTGAGGATACAGTGCAGCCCTAAGTCAAGGCCAGGCCCCTaGAGGGGGTGTGTCAGCATACAGTCATCTCATGATCAGCTTCAG +
Preference number: 1 (lower is better)
Translates to: PLLRIQCSPKSRPGP*RGCVSIQSSHDQLQ
Trigger: CTGAAGCTGATCATGAGATGACTGTATGCTGACACACCCCCTTCAGGGGCCTGGCCTTGACTTAGGGCTGCACTGTATCCTCAGCAACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR GCA 90 bp AGGACACAGAGCCATGGCCTTGTTGGATCTTTGGGCATCCGACTGTaGTTGGCCACACCAGCTCCTAGCACAAGACTGTTCCTGATGCTC +
Preference number: 1 (lower is better)
Translates to: RTQSHGLVGSLGIRL*LATPAPSTRLFLML
Trigger: GAGCATCAGGAACAGTCTTGTGCTAGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 90 bp AGGGATAGAAGGGAATATTTGGAGGACAACATGTGGGTTGGCACTTaGGCCACCCTGACCCTGAGCCATGAAAGACCCTGGAGGCCTGTG +
Preference number: 1 (lower is better)
Translates to: RDRREYLEDNMWVGT*ATLTLSHERPWRPV
Trigger: CACAGGCCTCCAGGGTCTTTCATGGCTCAGGGTCAGGGTGGCTCAAGTGCCAACCCACATGTTGTCCTCCAAATATTCCCTTCTATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 90 bp AACAAAAAGAACTGTGCATTGAGCTCTAGAGCCTGCGGGTGCTGCTaGAACCCCCTGACTGGAGTACAACACACAGAGATAGCCCTGCTC +
Preference number: 1 (lower is better)
Translates to: NKKNCALSSRACGCC*NPLTGVQHTEIALL
Trigger: GAGCAGGGCTATCTCTGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGAGCTCAATGCACAGTTCTTTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR GCA 90 bp ACAGAGGGCCATGGATATATACAGTGGTGCACTGGCACCAGCTTGTaGCAGCTGACGAGAGTCAATTGTGTGCTTCTCTTCCCAATTCTG +
Preference number: 1 (lower is better)
Translates to: TEGHGYIQWCTGTSL*QLTRVNCVLLFPIL
Trigger: CAGAATTGGGAAGAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCCCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 90 bp CTGACAGCAGATCTCTCAGTGGCAATTATAGAGGTCAGAAGACAATaGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCC +
Preference number: 1 (lower is better)
Translates to: LTADLSVAIIEVRRQ*DDIFKVLQAGCPEA
Trigger: GGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGCCACTGAGAGATCTGCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
3UTR TCA 90 bp AATTCGAAAGCAGTCAATTCTAGAGTTGGGATAGTTCAGATGGGCTaGGCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCC +
Preference number: 1 (lower is better)
Translates to: NSKAVNSRVGIVQMG*ARLKGSAFEDLLSP
Trigger: GGGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGCTCAGCCCATCTGAACTATCCCAACTCTAGAATTGACTGCTTTCGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR TCA 90 bp CTCTCACCTCCACAATCATTCCATAGCAAATGTGTGTCTTCTGGATaGTGTGGAAGAGAGAGCCCAGCAAGCACTATGGGCCTGGCTTTG +
Preference number: 1 (lower is better)
Translates to: LSPPQSFHSKCVSSG*CGRESPASTMGLAL
Trigger: CAAAGCCAGGCCCATAGTGCTTGCTGGGCTCTCTCTTCCACATCATCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR GCA 90 bp GTAGTAAACTCTAGCTTCACAGAGGGCCATGGATATATACAGTGGTaGACTGGCACCAGCTTGTGCCAGCTGACGAGAGTCAATTGTGTG +
Preference number: 1 (lower is better)
Translates to: VVNSSFTEGHGYIQW*TGTSLCQLTRVNCV
Trigger: CACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCCCTCTGTGAAGCTAGAGTTTACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 90 bp AGAGAAGAGATGGGAAGTCAATGCCCAACCCTGTCCCATCATAATTaGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAGA +
Preference number: 1 (lower is better)
Translates to: REEMGSQCPTLSHHN*VQTPHIRKWPPTQR
Trigger: TCTCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATTATGATGGGACAGGGTTGGGCATTGACTTCCCATCTCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR TCA 90 bp GCCATGGATATATACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTaGCGAGAGTCAATTGTGTGCTTCTCTTCCCAATTCTGCATCAAA +
Preference number: 1 (lower is better)
Translates to: AMDIYSGALAPACAS*RESIVCFSSQFCIK
Trigger: TTTGATGCAGAATTGGGAAGAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 90 bp CTGTATCTAGGATCATTTGGGAGAGGAGCTGGGGGTAGGGCATTGTaGTTGAAGCCAGATAACATTCCCAAGGTCACACAATTCGAAAGC +
Preference number: 1 (lower is better)
Translates to: LYLGSFGRGAGGRAL*LKPDNIPKVTQFES
Trigger: GCTTTCGAATTGTGTGACCTTGGGAATGTTATCTGGCTTCAACCACAATGCCCTACCCCCAGCTCCTCTCCCAAATGATCCTAGATACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 90 bp GTGTGTCTTCTGGATGATGTGGAAGAGAGAGCCCAGCAAGCACTATaGGCCTGGCTTTGCCAAAATCTAAAACAGGCCAAAGGGATATTA +
Preference number: 1 (lower is better)
Translates to: VCLLDDVEERAQQAL*AWLCQNLKQAKGIL
Trigger: TAATATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGGGCTCTCTCTTCCACATCATCCAGAAGACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 90 bp TTAGTAGTAAACTCTAGCTTCACAGAGGGCCATGGATATATACAGTaGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGAGTCAATTGT +
Preference number: 1 (lower is better)
Translates to: LVVNSSFTEGHGYIQ*CTGTSLCQLTRVNC
Trigger: ACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCCCTCTGTGAAGCTAGAGTTTACTACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 90 bp ATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTaGAGCCAGATAACTTCATCCAGGGGTAGATGGGTTGTGAAGCAA +
Preference number: 1 (lower is better)
Translates to: ISSCHISRCLPLHNI*SQITSSRGRWVVKQ
Trigger: TTGCTTCACAACCCATCTACCCCTGGATGAAGTTATCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
3UTR GCA 90 bp TTTCTTGACCGTCAGCTCAGCCATCCTGAAACCGGCTTTACAGTGTaGAGATCCCATCAATTCTTTGGTCAGCTTCATGTTAGCACCAAT +
Preference number: 1 (lower is better)
Translates to: FLDRQLSHPETGFTV*RSHQFFGQLHVSTN
Trigger: ATTGGTGCTAACATGAAGCTGACCAAAGAATTGATGGGATCTGCACACTGTAAAGCCGGTTTCAGGATGGCTGAGCTGACGGTCAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 90 bp AACATAGAACGAGGCTGCAGAGCCCCGCACAGAGGAAAGCACTGTTaGATAAATGGCCATAAACAACACAACATAACTTGCAATAGTGCC +
Preference number: 1 (lower is better)
Translates to: NIERGCRAPHRGKHC*INGHKQHNITCNSA
Trigger: GGCACTATTGCAAGTTATGTTGTGTTGTTTATGGCCATTTATCCAACAGTGCTTTCCTCTGTGCGGGGCTCTGCAGCCTCGTTCTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 90 bp CACATGTCCCTGGAGAAAGACATGTATCTTCAGATTGAAGAAACTTaGGTCCGTGGAAGGATAAGCAGACTGACAGCAGATCTCTCAGTG +
Preference number: 1 (lower is better)
Translates to: HMSLEKDMYLQIEET*VRGRISRLTADLSV
Trigger: CACTGAGAGATCTGCTGTCAGTCTGCTTATCCTTCCACGGACTCAAGTTTCTTCAATCTGAAGATACATGTCTTTCTCCAGGGACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
3UTR TCA 90 bp GTGGCTTTCATGGGAAGAAGCAGGCCTACTCTGTGCAGCTGCTGCTaGAAGACTAGGAAAAAGTGTGATTTACAAACAATGCTTAAGGTC +
Preference number: 1 (lower is better)
Translates to: VAFMGRSRPTLCSCC*KTRKKCDLQTMLKV
Trigger: GACCTTAAGCATTGTTTGTAAATCACACTTTTTCCTAGTCTTTCAGCAGCAGCTGCACAGAGTAGGCCTGCTTCTTCCCATGAAAGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR GCA 90 bp TCACATCAGGAAATGGCCTCCTACACAGAGAGAGAAATCTTGGACTaGTTAACCTCCTATAACTCACCCCTTTCCACACTTAACTCTCTT +
Preference number: 1 (lower is better)
Translates to: SHQEMASYTEREILD*LTSYNSPLSTLNSL
Trigger: AAGAGAGTTAAGTGTGGAAAGGGGTGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR TCA 90 bp AGATCCCATCAATTCTTTGGTCAGCTTCATGTTAGCACCAATATCTaGAAGGAAGGAAGCCCCAGCTTCCATCTAGATGAACACCAAAGA +
Preference number: 1 (lower is better)
Translates to: RSHQFFGQLHVSTNI*KEGSPSFHLDEHQR
Trigger: TCTTTGGTGTTCATCTAGATGGAAGCTGGGGCTTCCTTCCTTTCAGATATTGGTGCTAACATGAAGCTGACCAAAGAATTGATGGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 90 bp AGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTaGGAGCCAATAAACAATGTAGCTAAGTTTGGGCCCAAAACAAGC +
Preference number: 1 (lower is better)
Translates to: RRIHCLHLFTLQSRL*EPINNVAKFGPKTS
Trigger: GCTTGTTTTGGGCCCAAACTTAGCTACATTGTTTATTGGCTCCCAAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 90 bp CAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTaGGCACAAGCACTGAGAATATATCACAACATACCATTTATACGC +
Preference number: 1 (lower is better)
Translates to: QSITCGMKSKNRVPR*AQALRIYHNIPFIR
Trigger: GCGTATAAATGGTATGTTGTGATATATTCTCAGTGCTTGTGCCCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 90 bp ACAGGCCAAAGGGATATTAAATTTCTTATTTGGTGTGGGTTGGGCTaGGCCAGTAATTTGTTCTCACTTACAGTGGTCTGTCGTATGTTT +
Preference number: 1 (lower is better)
Translates to: TGQRDIKFLIWCGLG*ASNLFSLTVVCRMF
Trigger: AAACATACGACAGACCACTGTAAGTGAGAACAAATTACTGGCCCAGCCCAACCCACACCAAATAAGAAATTTAATATCCCTTTGGCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR GCA 90 bp GGAAAGCACTGTTGGATAAATGGCCATAAACAACACAACATAACTTaGAATAGTGCCCACACACTACTAGTTGATAAAACTCAGTGTGGC +
Preference number: 1 (lower is better)
Translates to: GKHCWINGHKQHNIT*NSAHTLLVDKTQCG
Trigger: GCCACACTGAGTTTTATCAACTAGTAGTGTGTGGGCACTATTGCAAGTTATGTTGTGTTGTTTATGGCCATTTATCCAACAGTGCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 90 bp TCAGTTAACATCCAGAATTATCAGTCATATTCCAGATATTATGGTTaGGAATTCCCACTCAAGAAGTTTACACAGAGTAGCTTTTGGAGC +
Preference number: 1 (lower is better)
Translates to: SVNIQNYQSYSRYYG*EFPLKKFTQSSFWS
Trigger: GCTCCAAAAGCTACTCTGTGTAAACTTCTTGAGTGGGAATTCTCAACCATAATATCTGGAATATGACTGATAATTCTGGATGTTAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCTCAAGGCCAGGCCCCTaGAGGGGGTGTGTCAGCATA +
Preference number: 2 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLSRPGP*RGCVSI
Trigger: TATGCTGACACACCCCCTTCAGGGGCCTGGCCTTGA...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCATGCCATGGGGACCATaGGCATCAGCAGTTGCCACA +
Preference number: 2 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLMPWGP*ASAVAT
Trigger: TGTGGCAACTGCTGATGCTCATGGTCCCCATGGCAT...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp AGAGTGAACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCAAGCCAGGGAAAGCACTaGGGGGACCAGGCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: RVNQAWKNNEPCPLWARASQGKH*GDQASD
Trigger: GTCTGAGGCCTGGTCCCCCCAGTGCTTTCCCTGGCT...TGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTTCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 90 bp GGTTGTGCCCACTCAAGGACACAGAGCCATGGCCTTGTTGGATCTTaGGGCATCCGACTGTGCTTGGCCACACCAGCTCCTAGCACAAGA +
Preference number: 2 (lower is better)
Translates to: GCAHSRTQSHGLVGS*GIRLCLATPAPSTR
Trigger: TCTTGTGCTAGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCTTGAGTGGGCACAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 90 bp TGGCTAGGAATGGTTGTGCCCACTCAAGGACACAGAGCCATGGCCTaGTTGGATCTTTGGGCATCCGACTGTGCTTGGCCACACCAGCTC +
Preference number: 2 (lower is better)
Translates to: WLGMVVPTQGHRAMA*LDLWASDCAWPHQL
Trigger: GAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCTTGAGTGGGCACAACCATTCCTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCTGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTG +
Preference number: 2 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAWVVKQ*VQEPRL
Trigger: CAACCTCGGCTCCTGGACTCATTGCTTCACAACCCA...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
3UTR-3UTR TCA 90 bp TGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTTGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTG +
Preference number: 2 (lower is better)
Translates to: CHGDHEHQQLPHQQVFAPWVVKQ*VQEPRL
Trigger: CAACCTCGGCTCCTGGACTCATTGCTTCACAACCCA...AGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
3UTR-3UTR TCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTG +
Preference number: 2 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAWVVKQ*VQEPRL
Trigger: CAACCTCGGCTCCTGGACTCATTGCTTCACAACCCA...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
3UTR-3UTR CCA 90 bp GCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCCCAGCTGGGCCAGTGGTCACTTCTTCTTTaGGGTTGGCCTGATCTTCCT +
Preference number: 2 (lower is better)
Translates to: ARLKGSAFEDLLSPQLGQWSLLL*GWPDLP
Trigger: AGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCA...CTGGCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311042.10
3UTR CAA 90 bp CTAGGAATGGTTGTGCCCACTCAAGGACACAGAGCCATGGCCTTGTaGGATCTTTGGGCATCCGACTGTGCTTGGCCACACCAGCTCCTA +
Preference number: 2 (lower is better)
Translates to: LGMVVPTQGHRAMAL*DLWASDCAWPHQLL
Trigger: TAGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCTTGAGTGGGCACAACCATTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp AACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTATGCCATGGGGACCATaGGCATCAGCAGTTGCCACA +
Preference number: 2 (lower is better)
Translates to: NQAWKNNEPCPLWARAWPMPWGP*ASAVAT
Trigger: TGTGGCAACTGCTGATGCTCATGGTCCCCATGGCAT...AGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp GGCCATGGATATATACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGAATGCCATGGGGACCATaGGCATCAGCAGTTGCCACA +
Preference number: 2 (lower is better)
Translates to: GHGYIQWCTGTSLCQLTRMPWGP*ASAVAT
Trigger: TGTGGCAACTGCTGATGCTCATGGTCCCCATGGCAT...TCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp AACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTCACTCCACCATCAGATaGAAATGTGGAGAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: NNEPCPLWARAWPLLPSTHSTIR*KCGEAS
Trigger: GCTGGCCTCTCCACATTTTCATCTGATGGTGGAGTG...AGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCATCCCAGCTGGAATTTaGATAGAGATGGATTCACTC +
Preference number: 2 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLIPAGI*IEMDSL
Trigger: GAGTGAATCCATCTCTATTCAAATTCCAGCTGGGAT...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp CTTCAGTGGTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGTCTAGAGCCTGCGGGTaGTGCTGGAACCCCCTGACT +
Preference number: 2 (lower is better)
Translates to: LQWSGSSGTWRSPEYFCVSRACG*CWNPLT
Trigger: AGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGA...CACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTGGTCACTTCTTCTTTaGGGTTGGCCTGATCTTCCT +
Preference number: 2 (lower is better)
Translates to: GPHAMGTMSISSCHISRCWSLLL*GWPDLP
Trigger: AGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCA...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
3UTR-3UTR CCA 90 bp TCCACAGGAGCACAAGGTGATCTAAGGATCCTCAACTTGACCCAGGGGAAAACTGCCTGCGGGTGCTGCTaGAACCCCCTGACTGGAGTA +
Preference number: 2 (lower is better)
Translates to: STGAQGDLRILNLTQGKTACGCC*NPLTGV
Trigger: TACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGC...AGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp GGGGGTAGGGCATTGTGGTTGAAGCCAGATAACATTCCCAAGGTCACACAATTCGCCTGCGGGTGCTGCTaGAACCCCCTGACTGGAGTA +
Preference number: 2 (lower is better)
Translates to: GGRALWLKPDNIPKVTQFACGCC*NPLTGV
Trigger: TACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGC...GAATTGTGTGACCTTGGGAATGTTATCTGGCTTCAACCACAATGCCCTACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp GCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCCCAGCTGGGCCAGAGAAAGGACTGCAGGTaGAACAAAAAGAACTGTGCA +
Preference number: 2 (lower is better)
Translates to: ARLKGSAFEDLLSPQLGQRKDCR*NKKNCA
Trigger: TGCACAGTTCTTTTTGTTTCACCTGCAGTCCTTTCT...CTGGCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCTTTTCTCTCTGCTTCTaGCATAATTCGTTGGCTACA +
Preference number: 2 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLFSLCF*HNSLAT
Trigger: TGTAGCCAACGAATTATGTCAGAAGCAGAGAGAAAA...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp TTGGACCAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGAGTGCCATGAGGCCATaGGCCTGTGTCCCGAGGTGG +
Preference number: 2 (lower is better)
Translates to: LDQSITCGMKSKNRVPRWSAMRP*ACVPRW
Trigger: CCACCTCGGGACACAGGCTCATGGCCTCATGGCACT...CCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp TCCACAGGAGCACAAGGTGATCTAAGGATCCTCAACTTGACCCAGGGGAAAACTGGTGGTGAAGTGCCATaGGGCCATGAGCCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: STGAQGDLRILNLTQGKTGGEVP*GHEPVS
Trigger: GGACACAGGCTCATGGCCTCATGGCACTTCACCACC...AGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp GTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGAGAGAGAAGGTGGTGAAGTGCCATaGGGCCATGAGCCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: VRLLRDLEKSRVFLCEREGGEVP*GHEPVS
Trigger: GGACACAGGCTCATGGCCTCATGGCACTTCACCACC...TTCTCTCTCACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp GTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAATCTAGAGCCTGCGGGTaGTGCTGGAACCCCCTGACT +
Preference number: 2 (lower is better)
Translates to: VFKGSTSETIFEQKAPGQSRACG*CWNPLT
Trigger: AGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGA...TTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp ACACACACACACACACACACACACACGCACACACCAGTCCACAGGAGCACAAGGAAGGCTCAAAGGCAGTaGCTTCGAGGACTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTPVHRSTRKAQRQ*LRGLAL
Trigger: GAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTT...CCTTGTGCTCCTGTGGACTGGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp CTCTCACCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGCAAGGGCCTGAGGAGTaGGAGAGAGCTGCTTTTCAG +
Preference number: 2 (lower is better)
Translates to: LSPQLGQEEMFKKPHVRLQGPEE*ERAAFQ
Trigger: CTGAAAAGCAGCTCTCTCCCACTCCTCAGGCCCTTG...CAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGGTGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 90 bp ACACAGAGCCATGGCCTTGTTGGATCTTTGGGCATCCGACTGTGCTaGGCCACACCAGCTCCTAGCACAAGACTGTTCCTGATGCTCTTT +
Preference number: 2 (lower is better)
Translates to: TQSHGLVGSLGIRLC*ATPAPSTRLFLMLF
Trigger: AAAGAGCATCAGGAACAGTCTTGTGCTAGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp TCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGATGCCATGGGGACCATaGGCATCAGCAGTTGCCACA +
Preference number: 2 (lower is better)
Translates to: SEDNGMTSSKYSRQAALRMPWGP*ASAVAT
Trigger: TGTGGCAACTGCTGATGCTCATGGTCCCCATGGCAT...CCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
3UTR-3UTR TCA 90 bp GGCCATGGATATATACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGACCTAGCCCCATACCCTaGACAAGACTTCATCTGACA +
Preference number: 2 (lower is better)
Translates to: GHGYIQWCTGTSLCQLTRPSPIP*TRLHLT
Trigger: TGTCAGATGAAGTCTTGTTCAGGGTATGGGGCTAGG...TCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR GCA 90 bp TTTCCACACTTAACTCTCTTCTCCCCCAAGGCAAAGCTCCTGTCCTATTTTTCCGCCCTGAGGCCCCCATaGCATGGGGACCATGAGCAT +
Preference number: 2 (lower is better)
Translates to: FPHLTLFSPKAKLLSYFSALRPP*HGDHEH
Trigger: ATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGC...GGAAAAATAGGACAGGAGCTTTGCCTTGGGGGAGAAGAGAGTTAAGTGTGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp AACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTGAGATGGGAAGTCAATaGCCAACCCTGTCCCATCAT +
Preference number: 2 (lower is better)
Translates to: NQAWKNNEPCPLWARAWPEMGSQ*PTLSHH
Trigger: ATGATGGGACAGGGTTGGGCATTGACTTCCCATCTC...AGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp CCTTCCACTGGCCTCCTAAGTAGAAAAGCGCTGGAAAGGTTGGGGAGGAGTGTGCTGGAACCCCCTGACTaGAGTACAACACACAGAGAT +
Preference number: 2 (lower is better)
Translates to: PSTGLLSRKALERLGRSVLEPPD*STTHRD
Trigger: ATCTCTGTGTGTTGTACTCCAGTCAGGGGGTTCCAG...CACACTCCTCCCCAACCTTTCCAGCGCTTTTCTACTTAGGAGGCCAGTGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCCATCTCTGGATCATATaGAAGCCTAATATCTTACTC +
Preference number: 2 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLHLWII*KPNILL
Trigger: GAGTAAGATATTAGGCTTCCATATGATCCAGAGATG...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp GTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGAGAGAGAATGCTCTCACCCCAGCTaGGCCAGGAGGAGATGTTCA +
Preference number: 2 (lower is better)
Translates to: VRLLRDLEKSRVFLCERECSHPS*ARRRCS
Trigger: TGAACATCTCCTCCTGGCCCAGCTGGGGTGAGAGCA...TTCTCTCTCACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCGGATGTGGTAGATCCTaGTGGAGTGAGGATCGGGGT +
Preference number: 2 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGGCGRS*WSEDRG
Trigger: ACCCCGATCCTCACTCCACCAGGATCTACCACATCC...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 90 bp TGCCACCACCCCAAAATGCAGGCGGCTCATATCTTCTCTTCTTTCTaGACCGTCAGCTCAGCCATCCTGAAACCGGCTTTACAGTGTGCA +
Preference number: 2 (lower is better)
Translates to: CHHPKMQAAHIFSSF*TVSSAILKPALQCA
Trigger: TGCACACTGTAAAGCCGGTTTCAGGATGGCTGAGCTGACGGTCAAGAAAGAAGAGAAGATATGAGCCGCCTGCATTTTGGGGTGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp TCCACAGGAGCACAAGGTGATCTAAGGATCCTCAACTTGACCCAGGGGAAAACTTGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTG +
Preference number: 2 (lower is better)
Translates to: STGAQGDLRILNLTQGKTWVVKQ*VQEPRL
Trigger: CAACCTCGGCTCCTGGACTCATTGCTTCACAACCCA...AGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp ACACACACACACACACACACACACACGCACACACCAGTCCACAGGAGCACAAGGGTAGGGCATTGTGGTTaGAGCCAGATAACATTCCCA +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTPVHRSTRVGHCG*SQITFP
Trigger: TGGGAATGTTATCTGGCTTCAACCACAATGCCCTAC...CCTTGTGCTCCTGTGGACTGGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp AACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGCAGGTGTTTGCCCCTaGATAATATTTGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: NNEPCPLWARAWPLLPSTAGVCP*IIFEAR
Trigger: TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGC...AGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp CACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGGCACAAGCACTGAGGACCCTGGAGGCCTGTaGATATCCTGGAGAAGAAAG +
Preference number: 2 (lower is better)
Translates to: HMRNEEQEQSSKVGTSTEDPGGL*ISWRRK
Trigger: CTTTCTTCTCCAGGATATGCACAGGCCTCCAGGGTC...CTCAGTGCTTGTGCCCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp GTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAACTTCTGGTGGTGAAGTaGCATGAGGCCATGAGCCTG +
Preference number: 2 (lower is better)
Translates to: VFKGSTSETIFEQKAPGQLLVVK*HEAMSL
Trigger: CAGGCTCATGGCCTCATGGCACTTCACCACCAGAAG...TTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCGGCCTGTGCATATCCTaGAGAAGAAAGGACTGCAGG +
Preference number: 2 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGGLCIS*RRKDCR
Trigger: CCTGCAGTCCTTTCTTCTCCAGGATATGCACAGGCC...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp TCCACAGGAGCACAAGGTGATCTAAGGATCCTCAACTTGACCCAGGGGAAAACTGGACAACATGTGGGTTaGCACTTGAGCCACCCTGAC +
Preference number: 2 (lower is better)
Translates to: STGAQGDLRILNLTQGKTGQHVG*HLSHPD
Trigger: GTCAGGGTGGCTCAAGTGCCAACCCACATGTTGTCC...AGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp AACTATGGAAACAGCACCGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCCAGGGAAAGCACTaGGGGGACCAGGCCTCAGAC +
Preference number: 2 (lower is better)
Translates to: NYGNSTEFSREAPLRRYLSQGKH*GDQASD
Trigger: GTCTGAGGCCTGGTCCCCCCAGTGCTTTCCCTGGCT...CAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCGGTGCTGTTTCCATAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp AGAGTGAACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCAGGCTCCTCAGGGACTTaGAGAAGTCCCGAGTATTTT +
Preference number: 2 (lower is better)
Translates to: RVNQAWKNNEPCPLWARAGSSGT*RSPEYF
Trigger: AAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCC...TGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp CTTCAGTGGTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGATAGTTCAGATGGGCTaGGCAAGGCTCAAAGGCAGT +
Preference number: 2 (lower is better)
Translates to: LQWSGSSGTWRSPEYFCVIVQMG*ARLKGS
Trigger: ACTGCCTTTGAGCCTTGCTCAGCCCATCTGAACTAT...CACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp TTGGACCAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGAGCCTGGAAGAACAATaGACCTTGTCCCCTGTGGGC +
Preference number: 2 (lower is better)
Translates to: LDQSITCGMKSKNRVPRWSLEEQ*TLSPVG
Trigger: GCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCT...CCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp AGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAGATCTTGGACCAGGAGTGGGAGAGAGCTaGTTTTCAGGCCTTTTCTCT +
Preference number: 2 (lower is better)
Translates to: STSETIFEQKAPGQDLGPGVGES*FSGLFS
Trigger: AGAGAAAAGGCCTGAAAAGCAGCTCTCTCCCACTCC...TGGTCCAAGATCTTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCCTCACATCAGGAAATaGCCTCCTACACAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGPHIRK*PPTQRE
Trigger: CTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGG...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 90 bp GCCCTGTATCTAGGATCATTTGGGAGAGGAGCTGGGGGTAGGGCATaGTGGTTGAAGCCAGATAACATTCCCAAGGTCACACAATTCGAA +
Preference number: 2 (lower is better)
Translates to: ALYLGSFGRGAGGRA*WLKPDNIPKVTQFE
Trigger: TTCGAATTGTGTGACCTTGGGAATGTTATCTGGCTTCAACCACAATGCCCTACCCCCAGCTCCTCTCCCAAATGATCCTAGATACAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 90 bp TTCACAGAGGGCCATGGATATATACAGTGGTGCACTGGCACCAGCTaGTGCCAGCTGACGAGAGTCAATTGTGTGCTTCTCTTCCCAATT +
Preference number: 2 (lower is better)
Translates to: FTEGHGYIQWCTGTS*CQLTRVNCVLLFPI
Trigger: AATTGGGAAGAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCCCTCTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp AACTATGGAAACAGCACCGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGGCTGCTGGAACCCCCTaGCTGGAGTACAACACACAG +
Preference number: 2 (lower is better)
Translates to: NYGNSTEFSREAPLRRYLAAGTP*LEYNTQ
Trigger: CTGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGC...CAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCGGTGCTGTTTCCATAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp CAGCATGCCAGGGATAGAAGGGAATATTTGGAGGACAACATGTGGGTTGGCACTAAAAGAACTGTGCATTaGGCTCTAGAGCCTGCGGGT +
Preference number: 2 (lower is better)
Translates to: QHARDRREYLEDNMWVGTKRTVH*ALEPAG
Trigger: ACCCGCAGGCTCTAGAGCTCAATGCACAGTTCTTTT...AGTGCCAACCCACATGTTGTCCTCCAAATATTCCCTTCTATCCCTGGCATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp GTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAATAGTTCAGATGGGCTaGGCAAGGCTCAAAGGCAGT +
Preference number: 2 (lower is better)
Translates to: VFKGSTSETIFEQKAPGQIVQMG*ARLKGS
Trigger: ACTGCCTTTGAGCCTTGCTCAGCCCATCTGAACTAT...TTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp AACAGAGAGAAGAGATGGGAAGTCAATGCCCAACCCTGTCCCATCATAATTGGGCACTCCACCATCAGATaGAAATGTGGAGAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: NREKRWEVNAQPCPIIIGHSTIR*KCGEAS
Trigger: GCTGGCCTCTCCACATTTTCATCTGATGGTGGAGTG...CCCAATTATGATGGGACAGGGTTGGGCATTGACTTCCCATCTCTTCTCTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCATACAGTCATCTCATaGTCAGCTTCAGTGGTCAGG +
Preference number: 2 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGHTVIS*SASVVR
Trigger: CCTGACCACTGAAGCTGATCATGAGATGACTGTATG...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp ACCCCCAGGCTTTTCAACTATCTTTCACCTATCTCTTCAAACAAATATGTCCACGCCCTGAGGCCCCCATaGCATGGGGACCATGAGCAT +
Preference number: 2 (lower is better)
Translates to: TPRLFNYLSPISSNKYVHALRPP*HGDHEH
Trigger: ATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGC...GTGGACATATTTGTTTGAAGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR GCA 90 bp GTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAGGAGTGGGAGAGAGCTaGTTTTCAGGCCTTTTCTCT +
Preference number: 2 (lower is better)
Translates to: VFKGSTSETIFEQKAPGQGVGES*FSGLFS
Trigger: AGAGAAAAGGCCTGAAAAGCAGCTCTCTCCCACTCC...TTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp ACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCCTTCAATCCCGACTTTaGGAGCCAATAAACAATGTA +
Preference number: 2 (lower is better)
Translates to: TKPGRTMNLVPCGLGHGLLQSRL*EPINNV
Trigger: TACATTGTTTATTGGCTCCCAAAGTCGGGATTGAAG...GAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp GGCCATGGATATATACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGACAAGCACTATGGGCCTaGCTTTGCCAAAATCTAAAA +
Preference number: 2 (lower is better)
Translates to: GHGYIQWCTGTSLCQLTRQALWA*LCQNLK
Trigger: TTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTG...TCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 90 bp GCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAGATCTaGGACCAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTT +
Preference number: 2 (lower is better)
Translates to: APLRRYLSRRHLAKI*DQSITCGMKSKNRV
Trigger: AACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAAGATCTTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp AGAGTGAACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCAAGAAAGGACTGCAGGTaGAACAAAAAGAACTGTGCA +
Preference number: 2 (lower is better)
Translates to: RVNQAWKNNEPCPLWARARKDCR*NKKNCA
Trigger: TGCACAGTTCTTTTTGTTTCACCTGCAGTCCTTTCT...TGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTTCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp AACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTTCAAAAATTAAAAGTTaGGCTCAGCAACAGCATGCC +
Preference number: 2 (lower is better)
Translates to: NQAWKNNEPCPLWARAWPSKIKS*AQQQHA
Trigger: GGCATGCTGTTGCTGAGCTCAACTTTTAATTTTTGA...AGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp ATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCAAGCCAATTATGGCTCTaGCTATGGGCTGGCACAGGG +
Preference number: 2 (lower is better)
Translates to: MASYTEREILDCLTSYNSSQLWL*LWAGTG
Trigger: CCCTGTGCCAGCCCATAGTCAGAGCCATAATTGGCT...TGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp ACACACACACACACACACACACACACGCACACACCAGTCCACAGGAGCACAAGGACATCAGCAGGTGTTTaGCCCTGCATAATATTTGAA +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHTPVHRSTRTSAGV*PCIIFE
Trigger: TTCAAATATTATGCAGGGGCAAACACCTGCTGATGT...CCTTGTGCTCCTGTGGACTGGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp CAAAAATTAAAAGTTGAGCTCAGCAACAGCATGCCAGGGATAGAAGGGAATATTGCCCTGAGGCCCCCATaGCATGGGGACCATGAGCAT +
Preference number: 2 (lower is better)
Translates to: QKLKVELSNSMPGIEGNIALRPP*HGDHEH
Trigger: ATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGC...AATATTCCCTTCTATCCCTGGCATGCTGTTGCTGAGCTCAACTTTTAATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp TTTCCACACTTAACTCTCTTCTCCCCCAAGGCAAAGCTCCTGTCCTATTTTTCCGACCCTGGAGGCCTGTaGATATCCTGGAGAAGAAAG +
Preference number: 2 (lower is better)
Translates to: FPHLTLFSPKAKLLSYFSDPGGL*ISWRRK
Trigger: CTTTCTTCTCCAGGATATGCACAGGCCTCCAGGGTC...GGAAAAATAGGACAGGAGCTTTGCCTTGGGGGAGAAGAGAGTTAAGTGTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp AACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTTGCAGAAGGATTCATTaGCTGCATCTTTTCACTCTT +
Preference number: 2 (lower is better)
Translates to: NQAWKNNEPCPLWARAWPCRRIH*LHLFTL
Trigger: AAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCA...AGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 90 bp TATCTAGGATCATTTGGGAGAGGAGCTGGGGGTAGGGCATTGTGGTaGAAGCCAGATAACATTCCCAAGGTCACACAATTCGAAAGCAGT +
Preference number: 2 (lower is better)
Translates to: YLGSFGRGAGGRALW*KPDNIPKVTQFESS
Trigger: ACTGCTTTCGAATTGTGTGACCTTGGGAATGTTATCTGGCTTCAACCACAATGCCCTACCCCCAGCTCCTCTCCCAAATGATCCTAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp GATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGGGAGCCAATAAAAGCCAATTATGGCTCTaGCTATGGGCTGGCACAGGG +
Preference number: 2 (lower is better)
Translates to: DSLPASFHSSIPTLGANKSQLWL*LWAGTG
Trigger: CCCTGTGCCAGCCCATAGTCAGAGCCATAATTGGCT...TTTATTGGCTCCCAAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp CACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGGCACAAGCACTGAGATCCCAGCTGGAATTTaGATAGAGATGGATTCACTC +
Preference number: 2 (lower is better)
Translates to: HMRNEEQEQSSKVGTSTEIPAGI*IEMDSL
Trigger: GAGTGAATCCATCTCTATTCAAATTCCAGCTGGGAT...CTCAGTGCTTGTGCCCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp GATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGGGAGCCAATAAATCCAAAAGGGGCTCCTaGAAGGCCGTTGCTGAGGAT +
Preference number: 2 (lower is better)
Translates to: DSLPASFHSSIPTLGANKSKRGS*KAVAED
Trigger: ATCCTCAGCAACGGCCTTGCAGGAGCCCCTTTTGGA...TTTATTGGCTCCCAAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCTGGTCACTTCTTCTTTaGGGTTGGCCTGATCTTCCT +
Preference number: 2 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVWSLLL*GWPDLP
Trigger: AGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCA...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
3UTR CAA 90 bp ACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGAGTCAATaGTGTGCTTCTCTTCCCAATTCTGCATCAAATTTGCCAATTAAA +
Preference number: 2 (lower is better)
Translates to: TVVHWHQLVPADESQ*CASLPNSASNLPIK
Trigger: TTTAATTGGCAAATTTGATGCAGAATTGGGAAGAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 90 bp GCCATCCTGAAACCGGCTTTACAGTGTGCAGATCCCATCAATTCTTaGGTCAGCTTCATGTTAGCACCAATATCTGAAAGGAAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: AILKPALQCADPINS*VSFMLAPISERKEA
Trigger: GGCTTCCTTCCTTTCAGATATTGGTGCTAACATGAAGCTGACCAAAGAATTGATGGGATCTGCACACTGTAAAGCCGGTTTCAGGATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp ACCCCCAGGCTTTTCAACTATCTTTCACCTATCTCTTCAAACAAATATGTCCACTGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTG +
Preference number: 2 (lower is better)
Translates to: TPRLFNYLSPISSNKYVHWVVKQ*VQEPRL
Trigger: CAACCTCGGCTCCTGGACTCATTGCTTCACAACCCA...GTGGACATATTTGTTTGAAGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp GTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAACCCATAGACATTCTCTaGAAGCTAAGTTTCCCAACA +
Preference number: 2 (lower is better)
Translates to: VFKGSTSETIFEQKAPGQPIDIL*KLSFPT
Trigger: TGTTGGGAAACTTAGCTTTCAGAGAATGTCTATGGG...TTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTGCAGGTGTTTGCCCCTaGATAATATTTGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: TMSISSCHISRCLPLHNIAGVCP*IIFEAR
Trigger: TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGC...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
3UTR-3UTR GCA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGAGATGGGAAGTCAATaGCCAACCCTGTCCCATCAT +
Preference number: 2 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFEMGSQ*PTLSHH
Trigger: ATGATGGGACAGGGTTGGGCATTGACTTCCCATCTC...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp GGCCATGGATATATACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGATTGCATGAATTAATATaGACTATACTCTCACCTCCA +
Preference number: 2 (lower is better)
Translates to: GHGYIQWCTGTSLCQLTRLHELI*TILSPP
Trigger: TGGAGGTGAGAGTATAGTGCATATTAATTCATGCAA...TCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR CCA 90 bp GATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGGGAGCCAATAAAAGCCATGAAAGACCCTaGAGGCCTGTGCATATCCTG +
Preference number: 2 (lower is better)
Translates to: DSLPASFHSSIPTLGANKSHERP*RPVHIL
Trigger: CAGGATATGCACAGGCCTCCAGGGTCTTTCATGGCT...TTTATTGGCTCCCAAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp AGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAGATCTTGGACCACTTCAATCCCGACTTTaGGAGCCAATAAACAATGTA +
Preference number: 2 (lower is better)
Translates to: STSETIFEQKAPGQDLGPLQSRL*EPINNV
Trigger: TACATTGTTTATTGGCTCCCAAAGTCGGGATTGAAG...TGGTCCAAGATCTTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATACTTCACAGAGGGCCATaGATATATACAGTGGTGCAC +
Preference number: 2 (lower is better)
Translates to: QITSLNFTATTPKCRRLILHRGP*IYTVVH
Trigger: GTGCACCACTGTATATATCCATGGCCCTCTGTGAAG...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 90 bp TTTCTACCTGAAGACTCCATGCAGTCAAATTTCCCTGCCTTTATATaGGAATTTCTACAGAGACCCATGGTCTCCCCAAGTGAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: FLPEDSMQSNFPAFI*EFLQRPMVSPSEEA
Trigger: GGCTTCCTCACTTGGGGAGACCATGGGTCTCTGTAGAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGTAGGGCATTGTGGTTaGAGCCAGATAACATTCCCA +
Preference number: 2 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFVGHCG*SQITFP
Trigger: TGGGAATGTTATCTGGCTTCAACCACAATGCCCTAC...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp TTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGTGGTCACTTCTTCTTTaGGGTTGGCCTGATCTTCCT +
Preference number: 2 (lower is better)
Translates to: LFIQFKLLLGHFFFGVGLWSLLL*GWPDLP
Trigger: AGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCA...CAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
3UTR-3UTR TCA 90 bp GATTCACTCATTCTATTGGTGGACATTTTGGTAATTTCTCATGATCTCTCTCCTATGCCATGGGGACCATaGGCATCAGCAGTTGCCACA +
Preference number: 2 (lower is better)
Translates to: DSLILLVDILVISHDLSPMPWGP*ASAVAT
Trigger: TGTGGCAACTGCTGATGCTCATGGTCCCCATGGCAT...AGGAGAGAGATCATGAGAAATTACCAAAATGTCCACCAATAGAATGAGTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
3UTR-3UTR TCA 90 bp ATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCACTGTCCTATTTTTCCTaGTCTCACTCCACCATCAGA +
Preference number: 2 (lower is better)
Translates to: MASYTEREILDCLTSYNSLSYFS*SHSTIR
Trigger: TCTGATGGTGGAGTGAGATCAGGAAAAATAGGACAG...TGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp AGGTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTGCAGGTGTTTGCCCCTaGATAATATTTGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: RLYNFLLCQYPQIATQRCAGVCP*IIFEAR
Trigger: TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGC...ACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
3UTR-3UTR GCA 90 bp GTTGGCAATCATGGAGTTTACGTTAGGAGGGGAAAAGAGCCAAGCATTAAACAAATGAGCATCAGCAGTTaGCACATCAGCAGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: VGNHGVYVRRGKEPSIKQMSISS*HISRCL
Trigger: CAAACACCTGCTGATGTGGCAACTGCTGATGCTCAT...TTGTTTAATGCTTGGCTCTTTTCCCCTCCTAACGTAAACTCCATGATTGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp GTGGCAATTATAGAGGTCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGATGAGCATCAGCAGTTaGCACATCAGCAGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: VAIIEVRRQWDDIFKVLQMSISS*HISRCL
Trigger: CAAACACCTGCTGATGTGGCAACTGCTGATGCTCAT...CTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
3UTR-3UTR CCA 90 bp AATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAGAGAGAAAATAGAAGGGAATATTTaGAGGACAACATGTGGGTTG +
Preference number: 2 (lower is better)
Translates to: NWVQTPHIRKWPPTQREKIEGNI*RTTCGL
Trigger: CAACCCACATGTTGTCCTCCAAATATTCCCTTCTAT...TTTCTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp GATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGGGAGCCAATAAAAACAGAGAGAAGAGATaGGAAGTCAATGCCCAACCC +
Preference number: 2 (lower is better)
Translates to: DSLPASFHSSIPTLGANKNREKR*EVNAQP
Trigger: GGGTTGGGCATTGACTTCCCATCTCTTCTCTCTGTT...TTTATTGGCTCCCAAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATAGAGCTGTATCTCATCTaGATCTATCACTCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: QITSLNFTATTPKCRRLIELYLI*IYHSSF
Trigger: GAAGGAAGAGTGATAGATCCAGATGAGATACAGCTC...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 90 bp GATATTAAATTTCTTATTTGGTGTGGGTTGGGCTGGGCCAGTAATTaGTTCTCACTTACAGTGGTCTGTCGTATGTTTCACCACCACCAC +
Preference number: 2 (lower is better)
Translates to: DIKFLIWCGLGWASN*FSLTVVCRMFHHHH
Trigger: GTGGTGGTGGTGAAACATACGACAGACCACTGTAAGTGAGAACAAATTACTGGCCCAGCCCAACCCACACCAAATAAGAAATTTAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR TCA 90 bp GTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCACAGAAGACAATGGGATaGCATCTTCAAAGTACTCCA +
Preference number: 2 (lower is better)
Translates to: VVQFSALPVSPDCNPKVSQKTMG*HLQSTP
Trigger: TGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTG...TGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
3UTR-3UTR CCA 90 bp TTTCCACACTTAACTCTCTTCTCCCCCAAGGCAAAGCTCCTGTCCTATTTTTCCTCTGACATAATTCGTTaGCTACATCTGACACATGGA +
Preference number: 2 (lower is better)
Translates to: FPHLTLFSPKAKLLSYFSSDIIR*LHLTHG
Trigger: TCCATGTGTCAGATGTAGCCAACGAATTATGTCAGA...GGAAAAATAGGACAGGAGCTTTGCCTTGGGGGAGAAGAGAGTTAAGTGTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CCA 90 bp AAGATCAAAGTCCTCCATAAGAGTTTTGGGCTACAGATAGTGGGAGAAAAACAGCTGTCCCATCATAATTaGGTTCAGACCCCTCACATC +
Preference number: 2 (lower is better)
Translates to: KIKVLHKSFGLQIVGEKQLSHHN*VQTPHI
Trigger: GATGTGAGGGGTCTGAACCCAATTATGATGGGACAG...CTGTTTTTCTCCCACTATCTGTAGCCCAAAACTCTTATGGAGGACTTTGATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp AGGTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCTCATCAGTAGCTTATaGGAATTTTCCCCACATCTT +
Preference number: 2 (lower is better)
Translates to: RLYNFLLCQYPQIATQRCLISSL*EFSPHL
Trigger: AAGATGTGGGGAAAATTCTCATAAGCTACTGATGAG...ACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
3UTR-3UTR GCA 90 bp AAGATCAAAGTCCTCCATAAGAGTTTTGGGCTACAGATAGTGGGAGAAAAACAGGCAGGTGTTTGCCCCTaGATAATATTTGAAGCCAGA +
Preference number: 2 (lower is better)
Translates to: KIKVLHKSFGLQIVGEKQAGVCP*IIFEAR
Trigger: TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGC...CTGTTTTTCTCCCACTATCTGTAGCCCAAAACTCTTATGGAGGACTTTGATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR GCA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATACCCTATATTTTTACTTaGCTCTTAAACTTGGCTAGG +
Preference number: 2 (lower is better)
Translates to: QITSLNFTATTPKCRRLIPYIFT*LLNLAR
Trigger: CCTAGCCAAGTTTAAGAGGCAAGTAAAAATATAGGG...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR GCA 90 bp TGCACTATACTCTCACCTCCACAATCATTCCATAGCAAATGTGTGTCTTCTGGAAGACCTTATGGCTTCTaGTTATTGGGCAATATGCAA +
Preference number: 2 (lower is better)
Translates to: CTILSPPQSFHSKCVSSGRPYGF*LLGNMQ
Trigger: TTGCATATTGCCCAATAAGCAGAAGCCATAAGGTCT...TCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR CCA 90 bp ATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCAATTTCTTTGCATCTCTaGATCATATGGAAGCCTAAT +
Preference number: 2 (lower is better)
Translates to: MASYTEREILDCLTSYNSISLHL*IIWKPN
Trigger: ATTAGGCTTCCATATGATCCAGAGATGCAAAGAAAT...TGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 90 bp CTGACACATGGATTTAGACAACTCCTACACTCTCTAGGGATTTCTTaGCATCTCTGGATCATATGGAAGCCTAATATCTTACTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: LTHGFRQLLHSLGIS*HLWIIWKPNILLRK
Trigger: TTTTCTGAGTAAGATATTAGGCTTCCATATGATCCAGAGATGCAAAGAAATCCCTAGAGAGTGTAGGAGTTGTCTAAATCCATGTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR TCA 90 bp TTCTACCTGAAGACTCCATGCAGTCAAATTTCCCTGCCTTTATATTGGAATTTCGAACAAGACTTCATCTaGCATTGCCCCTATATTTTT +
Preference number: 2 (lower is better)
Translates to: FYLKTPCSQISLPLYWNFEQDFI*HCPYIF
Trigger: AAAAATATAGGGGCAATGTCAGATGAAGTCTTGTTC...GAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR CAA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCGCTGGGGGTAGGGCATaGTGGTTGAAGCCAGATAAC +
Preference number: 3 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLAGGRA*WLKPDN
Trigger: GTTATCTGGCTTCAACCACAATGCCCTACCCCCAGC...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCCATGAGCATCAGCAGTaGCCACATCAGCAGGTGTTT +
Preference number: 3 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLHEHQQ*PHQQVF
Trigger: AAACACCTGCTGATGTGGCAACTGCTGATGCTCATG...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR TCA 72 bp GTGGGTTGGCACTTGAGCCACCCTGACCCTGAGCCATaGAAGACCCTGGAGGCCTGTGCATATCCTGGAGAA +
Preference number: 3 (lower is better)
Translates to: VGWHLSHPDPEP*KTLEACAYPGE
Trigger: TTCTCCAGGATATGCACAGGCCTCCAGGGTCTTTCATGGCTCAGGGTCAGGGTGGCTCAAGTGCCAACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR TCA 72 bp AAAGCAGTCCAAAAGGGGCTCCTGCAAGGCCGTTGCTaGGGATACAGTGCAGCCCTAAGTCAAGGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: KAVQKGLLQGRC*GYSAALSQGQA
Trigger: GGCCTGGCCTTGACTTAGGGCTGCACTGTATCCTCAGCAACGGCCTTGCAGGAGCCCCTTTTGGACTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR GCA 72 bp GATAGTTCAGATGGGCTGAGCAAGGCTCAAAGGCAGTaGCTTCGAGGACTTGCTCTCACCCCAGCTGGGCCA +
Preference number: 3 (lower is better)
Translates to: DSSDGLSKAQRQ*LRGLALTPAGP
Trigger: TGGCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGCTCAGCCCATCTGAACTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCTCTCTAGGGATTTCTTaGCATCTCTGGATCATATGG +
Preference number: 3 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLSLGIS*HLWIIW
Trigger: CCATATGATCCAGAGATGCAAAGAAATCCCTAGAGA...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp AACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTCTAAGGATCCTCAACTaGACCCAGGGGAAAACTCCC +
Preference number: 3 (lower is better)
Translates to: NNEPCPLWARAWPLLPSTLRILN*TQGKTP
Trigger: GGGAGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAG...AGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR TCA 72 bp CCCCTGAAGGGGGTGTGTCAGCATACAGTCATCTCATaGTCAGCTTCAGTGGTCAGGCTCCTCAGGGACTTG +
Preference number: 3 (lower is better)
Translates to: PLKGVCQHTVIS*SASVVRLLRDL
Trigger: CAAGTCCCTGAGGAGCCTGACCACTGAAGCTGATCATGAGATGACTGTATGCTGACACACCCCCTTCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 72 bp AAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATaGCCTCTCCTCCCTTCCACTGGCCTCCTAAGTAGA +
Preference number: 3 (lower is better)
Translates to: KNNEPCPLWARA*PLLPSTGLLSR
Trigger: TCTACTTAGGAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 72 bp GCTGCCTTGGGACAGTACTTGCCTGATTCCTCTTTCTaGGGGCGTGGCACTCTGAGCTGTATCTCATCTGGA +
Preference number: 3 (lower is better)
Translates to: AALGQYLPDSSF*GRGTLSCISSG
Trigger: TCCAGATGAGATACAGCTCAGAGTGCCACGCCCCCAGAAAGAGGAATCAGGCAAGTACTGTCCCAAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR CAA 90 bp TCAGATGGGCTGAGCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCCATGAGCATCAGCAGTaGCCACATCAGCAGGTGTTT +
Preference number: 3 (lower is better)
Translates to: SDGLSKAQRQCLRGLALTHEHQQ*PHQQVF
Trigger: AAACACCTGCTGATGTGGCAACTGCTGATGCTCATG...GGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGCTCAGCCCATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp AACAGAGAGAAGAGATGGGAAGTCAATGCCCAACCCTGTCCCATCATAATTGGGAGTGCCTTCGAGGACTaGCTCTCACCCCAGCTGGGC +
Preference number: 3 (lower is better)
Translates to: NREKRWEVNAQPCPIIIGSAFED*LSPQLG
Trigger: GCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACT...CCCAATTATGATGGGACAGGGTTGGGCATTGACTTCCCATCTCTTCTCTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp AACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGTAGGGCATTGTGGTaGAAGCCAGATAACATTCCC +
Preference number: 3 (lower is better)
Translates to: NNEPCPLWARAWPLLPSTGRALW*KPDNIP
Trigger: GGGAATGTTATCTGGCTTCAACCACAATGCCCTACC...AGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp GGCCATGGATATATACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGAGCCTTGGGACAGTACTaGCCTGATTCCTCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: GHGYIQWCTGTSLCQLTRALGQY*PDSSFW
Trigger: CCAGAAAGAGGAATCAGGCAAGTACTGTCCCAAGGC...TCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 72 bp AGGGAATATTTGGAGGACAACATGTGGGTTGGCACTTaGGCCACCCTGACCCTGAGCCATGAAAGACCCTGG +
Preference number: 3 (lower is better)
Translates to: REYLEDNMWVGT*ATLTLSHERPW
Trigger: CCAGGGTCTTTCATGGCTCAGGGTCAGGGTGGCTCAAGTGCCAACCCACATGTTGTCCTCCAAATATTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR TCA 72 bp AGGATACAGTGCAGCCCTAAGTCAAGGCCAGGCCCCTaGAGGGGGTGTGTCAGCATACAGTCATCTCATGAT +
Preference number: 3 (lower is better)
Translates to: RIQCSPKSRPGP*RGCVSIQSSHD
Trigger: ATCATGAGATGACTGTATGCTGACACACCCCCTTCAGGGGCCTGGCCTTGACTTAGGGCTGCACTGTATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR GCA 72 bp TCTAGCTTCACAGAGGGCCATGGATATATACAGTGGTaGACTGGCACCAGCTTGTGCCAGCTGACGAGAGTC +
Preference number: 3 (lower is better)
Translates to: SSFTEGHGYIQW*TGTSLCQLTRV
Trigger: GACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCCCTCTGTGAAGCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 72 bp AACTGTGCATTGAGCTCTAGAGCCTGCGGGTGCTGCTaGAACCCCCTGACTGGAGTACAACACACAGAGATA +
Preference number: 3 (lower is better)
Translates to: NCALSSRACGCC*NPLTGVQHTEI
Trigger: TATCTCTGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGAGCTCAATGCACAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCAAGTTTAAACTCCTCCTaGGTCACTTCTTCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPSLNSS*VTSSLG
Trigger: CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACT...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000442631.5
3UTR-3UTR CAA 90 bp GAGCCAATAAACAATGTAGCTAAGTTTGGGCCCAAAACAAGCCAGGAAGACTCCAGTGCCTTCGAGGACTaGCTCTCACCCCAGCTGGGC +
Preference number: 3 (lower is better)
Translates to: EPINNVAKFGPKTSQEDSSAFED*LSPQLG
Trigger: GCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACT...GGAGTCTTCCTGGCTTGTTTTGGGCCCAAACTTAGCTACATTGTTTATTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR TCA 72 bp ACACACACGCACACACCAGTCCACAGGAGCACAAGGTaGTCTAAGGATCCTCAACTTGACCCAGGGGAAAAC +
Preference number: 3 (lower is better)
Translates to: THTHTPVHRSTR*SKDPQLDPGEN
Trigger: GTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGACTGGTGTGTGCGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR GCA 72 bp AAAAAGAACTGTGCATTGAGCTCTAGAGCCTGCGGGTaGTGCTGGAACCCCCTGACTGGAGTACAACACACA +
Preference number: 3 (lower is better)
Translates to: KKNCALSSRACG*CWNPLTGVQHT
Trigger: TGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGAGCTCAATGCACAGTTCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 72 bp CTCAGCAACAGCATGCCAGGGATAGAAGGGAATATTTaGAGGACAACATGTGGGTTGGCACTTGAGCCACCC +
Preference number: 3 (lower is better)
Translates to: LSNSMPGIEGNI*RTTCGLALEPP
Trigger: GGGTGGCTCAAGTGCCAACCCACATGTTGTCCTCCAAATATTCCCTTCTATCCCTGGCATGCTGTTGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 72 bp TGTGTCAGCATACAGTCATCTCATGATCAGCTTCAGTaGTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAG +
Preference number: 3 (lower is better)
Translates to: CVSIQSSHDQLQ*SGSSGTWRSPE
Trigger: CTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAGCTGATCATGAGATGACTGTATGCTGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 72 bp CTTCACAGAGGGCCATGGATATATACAGTGGTGCACTaGCACCAGCTTGTGCCAGCTGACGAGAGTCAATTG +
Preference number: 3 (lower is better)
Translates to: LHRGPWIYTVVH*HQLVPADESQL
Trigger: CAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCCCTCTGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 72 bp AACTCTAGCTTCACAGAGGGCCATGGATATATACAGTaGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGA +
Preference number: 3 (lower is better)
Translates to: NSSFTEGHGYIQ*CTGTSLCQLTR
Trigger: TCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCCCTCTGTGAAGCTAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR CAA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAAGTTTAAACTCCTCCTaGGTCACTTCTTCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPASLNSS*VTSSLG
Trigger: CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACT...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
3UTR-3UTR CAA 90 bp CCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGGAGACAAAAAAGAACTGTGCATaGAGCTCTAGAGCCTGCGGG +
Preference number: 3 (lower is better)
Translates to: PQLGQEEMFKKPHVRLETKKNCA*SSRACG
Trigger: CCCGCAGGCTCTAGAGCTCAATGCACAGTTCTTTTT...TGTCTCCAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp GAGCCAATAAACAATGTAGCTAAGTTTGGGCCCAAAACAAGCCAGGAAGACTCCCATGTGGGTTGGCACTaGAGCCACCCTGACCCTGAG +
Preference number: 3 (lower is better)
Translates to: EPINNVAKFGPKTSQEDSHVGWH*SHPDPE
Trigger: CTCAGGGTCAGGGTGGCTCAAGTGCCAACCCACATG...GGAGTCTTCCTGGCTTGTTTTGGGCCCAAACTTAGCTACATTGTTTATTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp CCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGGAGACAGTCCAGGAGCCGAGGTaGTTCATTCAGTTTAAACTC +
Preference number: 3 (lower is better)
Translates to: PQLGQEEMFKKPHVRLETVQEPR*FIQFKL
Trigger: GAGTTTAAACTGAATGAACAACCTCGGCTCCTGGAC...TGTCTCCAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTCATGTGGGTTGGCACTaGAGCCACCCTGACCCTGAG +
Preference number: 3 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFHVGWH*SHPDPE
Trigger: CTCAGGGTCAGGGTGGCTCAAGTGCCAACCCACATG...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp ACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTACTCAGAAAATAACTaGGATCTTCCCCAGAGCCAA +
Preference number: 3 (lower is better)
Translates to: TKPGRTMNLVPCGLGHGLYSENN*DLPQSQ
Trigger: TTGGCTCTGGGGAAGATCCAAGTTATTTTCTGAGTA...GAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp ACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCTCTAGGGATTTCTTaGCATCTCTGGATCATATGG +
Preference number: 3 (lower is better)
Translates to: TKPGRTMNLVPCGLGHGLSLGIS*HLWIIW
Trigger: CCATATGATCCAGAGATGCAAAGAAATCCCTAGAGA...GAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR TCA 72 bp GCAGTCAATTCTAGAGTTGGGATAGTTCAGATGGGCTaGGCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTG +
Preference number: 3 (lower is better)
Translates to: AVNSRVGIVQMG*ARLKGSAFEDL
Trigger: CAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGCTCAGCCCATCTGAACTATCCCAACTCTAGAATTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR GCA 72 bp AGGCACCTGGCCAAGATCTTGGACCAGAGTATCACATaGGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGG +
Preference number: 3 (lower is better)
Translates to: RHLAKILDQSIT*GMKSKNRVPRW
Trigger: CCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAAGATCTTGGCCAGGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 72 bp ATGGGAAGTCAATGCCCAACCCTGTCCCATCATAATTaGGTTCAGACCCCTCACATCAGGAAATGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: MGSQCPTLSHHN*VQTPHIRKWPP
Trigger: AGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATTATGATGGGACAGGGTTGGGCATTGACTTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 72 bp AGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTaGGTAATAAGGCTGAAGAGGGCCATGGAGACAGCC +
Preference number: 3 (lower is better)
Translates to: RGDLMEGADYTG*VIRLKRAMETA
Trigger: GGCTGTCTCCATGGCCCTCTTCAGCCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441980.6
3UTR-3UTR CAA 90 bp GACACAGAGCCATGGCCTTGTTGGATCTTTGGGCATCCGACTGTGCTTGGCCACTTACTAAACAAAGGTTaGGGTGGAAGGACGTATTTC +
Preference number: 3 (lower is better)
Translates to: DTEPWPCWIFGHPTVLGHLLNKG*GGRTYF
Trigger: GAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAA...GTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 72 bp ATATACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTaGCGAGAGTCAATTGTGTGCTTCTCTTCCCAATTC +
Preference number: 3 (lower is better)
Translates to: IYSGALAPACAS*RESIVCFSSQF
Trigger: GAATTGGGAAGAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR GCA 72 bp CATGGATATATACAGTGGTGCACTGGCACCAGCTTGTaGCAGCTGACGAGAGTCAATTGTGTGCTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: HGYIQWCTGTSL*QLTRVNCVLLF
Trigger: GAAGAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 72 bp CTGGATGATGTGGAAGAGAGAGCCCAGCAAGCACTATaGGCCTGGCTTTGCCAAAATCTAAAACAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: LDDVEERAQQAL*AWLCQNLKQAK
Trigger: TTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGGGCTCTCTCTTCCACATCATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 72 bp CGAGGCTGCAGAGCCCCGCACAGAGGAAAGCACTGTTaGATAAATGGCCATAAACAACACAACATAACTTGC +
Preference number: 3 (lower is better)
Translates to: RGCRAPHRGKHC*INGHKQHNITC
Trigger: GCAAGTTATGTTGTGTTGTTTATGGCCATTTATCCAACAGTGCTTTCCTCTGTGCGGGGCTCTGCAGCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR CAA 90 bp AACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTAAGTCCCGAGTATTTTaGTGTGAGAGAGAAAATGAG +
Preference number: 3 (lower is better)
Translates to: NQAWKNNEPCPLWARAWPKSRVF*CERENE
Trigger: CTCATTTTCTCTCTCACACAAAAATACTCGGGACTT...AGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR GCA 72 bp CGTCAGCTCAGCCATCCTGAAACCGGCTTTACAGTGTaGAGATCCCATCAATTCTTTGGTCAGCTTCATGTT +
Preference number: 3 (lower is better)
Translates to: RQLSHPETGFTV*RSHQFFGQLHV
Trigger: AACATGAAGCTGACCAAAGAATTGATGGGATCTGCACACTGTAAAGCCGGTTTCAGGATGGCTGAGCTGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CCA 72 bp CATGATCAGCTTCAGTGGTCAGGCTCCTCAGGGACTTaGAGAAGTCCCGAGTATTTTTGTGTGAGAGAGAAA +
Preference number: 3 (lower is better)
Translates to: HDQLQWSGSSGT*RSPEYFCVREK
Trigger: TTTCTCTCTCACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAGCTGATCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAGTCCAGGAGCCGAGGTaGTTCATTCAGTTTAAACTC +
Preference number: 3 (lower is better)
Translates to: SAVATSAGVCPCIIFEARVQEPR*FIQFKL
Trigger: GAGTTTAAACTGAATGAACAACCTCGGCTCCTGGAC...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
3UTR-3UTR CAA 90 bp AGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAGATCTTGGACCAGATAGAAGGGAATATTaGGAGGACAACATGTGGGTT +
Preference number: 3 (lower is better)
Translates to: STSETIFEQKAPGQDLGPDRREY*EDNMWV
Trigger: AACCCACATGTTGTCCTCCAAATATTCCCTTCTATC...TGGTCCAAGATCTTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCTACTCAGAAAATAACTaGGATCTTCCCCAGAGCCAA +
Preference number: 3 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGYSENN*DLPQSQ
Trigger: TTGGCTCTGGGGAAGATCCAAGTTATTTTCTGAGTA...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp CCCATCATAATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAGATAGAAGGGAATATTaGGAGGACAACATGTGGGTT +
Preference number: 3 (lower is better)
Translates to: PIIIGFRPLTSGNGLLHRDRREY*EDNMWV
Trigger: AACCCACATGTTGTCCTCCAAATATTCCCTTCTATC...TCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATTATGATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGGTAGGGCATTGTGGTaGAAGCCAGATAACATTCCC +
Preference number: 3 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFGRALW*KPDNIP
Trigger: GGGAATGTTATCTGGCTTCAACCACAATGCCCTACC...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATACCAGAGACCCAGTTGTaGGGTATTTACGAGGAAAAC +
Preference number: 3 (lower is better)
Translates to: QITSLNFTATTPKCRRLIPETQL*GIYEEN
Trigger: GTTTTCCTCGTAAATACCCAACAACTGGGTCTCTGG...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 72 bp TGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTaGAGCCAGATAACTTCATCCAGGGGTAGATGGGTT +
Preference number: 3 (lower is better)
Translates to: CHISRCLPLHNI*SQITSSRGRWV
Trigger: AACCCATCTACCCCTGGATGAAGTTATCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
3UTR CCA 72 bp CATCATAATTGGGTTCAGACCCCTCACATCAGGAAATaGCCTCCTACACAGAGAGAGAAATCTTGGACTGCT +
Preference number: 3 (lower is better)
Translates to: HHNWVQTPHIRK*PPTQREKSWTA
Trigger: AGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATTATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CCA 72 bp CATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTaGGAGCCAATAAACAATGTAGCTAAGTTTGGGCCC +
Preference number: 3 (lower is better)
Translates to: HCLHLFTLQSRL*EPINNVAKFGP
Trigger: GGGCCCAAACTTAGCTACATTGTTTATTGGCTCCCAAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp CCAGCAAGCACTATGGGCCTGGCTTTGCCAAAATCTAAAACAGGCCAAAGGGATAGACTTCATCTGACATaGCCCCTATATTTTTACTTG +
Preference number: 3 (lower is better)
Translates to: PASTMGLALPKSKTGQRDRLHLT*PLYFYL
Trigger: CAAGTAAAAATATAGGGGCAATGTCAGATGAAGTCT...ATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 72 bp ATAACTTCATCCAGGGGTAGATGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAA +
Preference number: 3 (lower is better)
Translates to: ITSSRGRWVVKQ*VQEPRLFIQFK
Trigger: TTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCTTCACAACCCATCTACCCCTGGATGAAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000415443.5
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
3UTR TCA 72 bp CCACATGTCCCTGGAGAAAGACATGTATCTTCAGATTaGAGAAACTTGAGTCCGTGGAAGGATAAGCAGACT +
Preference number: 3 (lower is better)
Translates to: PHVPGERHVSSD*RNLSPWKDKQT
Trigger: AGTCTGCTTATCCTTCCACGGACTCAAGTTTCTTCAATCTGAAGATACATGTCTTTCTCCAGGGACATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
3UTR-3UTR CAA 90 bp GTTGGCAATCATGGAGTTTACGTTAGGAGGGGAAAAGAGCCAAGCATTAAACAAAGTTTAAACTCCTCCTaGGTCACTTCTTCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: VGNHGVYVRRGKEPSIKQSLNSS*VTSSLG
Trigger: CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACT...TTGTTTAATGCTTGGCTCTTTTCCCCTCCTAACGTAAACTCCATGATTGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311042.10
3UTR TCA 72 bp CTGGAGAAAGACATGTATCTTCAGATTGAAGAAACTTaGGTCCGTGGAAGGATAAGCAGACTGACAGCAGAT +
Preference number: 3 (lower is better)
Translates to: LEKDMYLQIEET*VRGRISRLTAD
Trigger: ATCTGCTGTCAGTCTGCTTATCCTTCCACGGACTCAAGTTTCTTCAATCTGAAGATACATGTCTTTCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
3UTR TCA 72 bp CAATTCTTTGGTCAGCTTCATGTTAGCACCAATATCTaGAAGGAAGGAAGCCCCAGCTTCCATCTAGATGAA +
Preference number: 3 (lower is better)
Translates to: QFFGQLHVSTNI*KEGSPSFHLDE
Trigger: TTCATCTAGATGGAAGCTGGGGCTTCCTTCCTTTCAGATATTGGTGCTAACATGAAGCTGACCAAAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 72 bp TTTATTTCATCTTCCTTTTTGCATCCTATGGACTTGTaGCTCTCCGATGCCCTAATGAAACCCTGCTTTCTC +
Preference number: 3 (lower is better)
Translates to: FISSSFLHPMDL*LSDALMKPCFL
Trigger: GAGAAAGCAGGGTTTCATTAGGGCATCGGAGAGTCACAAGTCCATAGGATGCAAAAAGGAAGATGAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR-3UTR CAA 90 bp GTTGGCAATCATGGAGTTTACGTTAGGAGGGGAAAAGAGCCAAGCATTAAACAAAAGTCCCGAGTATTTTaGTGTGAGAGAGAAAATGAG +
Preference number: 3 (lower is better)
Translates to: VGNHGVYVRRGKEPSIKQKSRVF*CERENE
Trigger: CTCATTTTCTCTCTCACACAAAAATACTCGGGACTT...TTGTTTAATGCTTGGCTCTTTTCCCCTCCTAACGTAAACTCCATGATTGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR-3UTR CAA 90 bp TGCACTATACTCTCACCTCCACAATCATTCCATAGCAAATGTGTGTCTTCTGGACTATTGGTGGACATTTaGGTAATTTCTCATGATCTC +
Preference number: 3 (lower is better)
Translates to: CTILSPPQSFHSKCVSSGLLVDI*VISHDL
Trigger: GAGATCATGAGAAATTACCAAAATGTCCACCAATAG...TCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR GCA 72 bp TTTAGGCAAGAGAAACATTTCTACCTGAAGACTCCATaGAGTCAAATTTCCCTGCCTTTATATTGGAATTTC +
Preference number: 3 (lower is better)
Translates to: FRQEKHFYLKTP*SQISLPLYWNF
Trigger: GAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAAATGTTTCTCTTGCCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR GCA 72 bp TGTTGGATAAATGGCCATAAACAACACAACATAACTTaGAATAGTGCCCACACACTACTAGTTGATAAAACT +
Preference number: 3 (lower is better)
Translates to: CWINGHKQHNIT*NSAHTLLVDKT
Trigger: AGTTTTATCAACTAGTAGTGTGTGGGCACTATTGCAAGTTATGTTGTGTTGTTTATGGCCATTTATCCAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR TCA 72 bp TCTCATGATCTCTCTCCTATTTTCAATGCCAAACAATaGTTCCTTGAACAGATTTACGTGTACCTACTTTTT +
Preference number: 3 (lower is better)
Translates to: SHDLSPIFNAKQ*FLEQIYVYLLF
Trigger: AAAAAGTAGGTACACGTAAATCTGTTCAAGGAATCATTGTTTGGCATTGAAAATAGGAGAGAGATCATGAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
CDS-3UTR TCA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCTGTTGCTTGGGCCTCTaGGGGGACTTGGCACGGCGG +
Preference number: 4 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLCCLGL*GDLARR
Trigger: CCGCCGTGCCAAGTCCCCTCAGAGGCCCAAGCAACA...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR GCA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCGCCCTGAGGCCCCCATaGCATGGGGACCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLALRPP*HGDHEH
Trigger: ATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGC...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCCACGGCTGGCGCCTaGCCCTCTGAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAPTAGA*PSEGAA
Trigger: AGCAGCCCCCTCAGAGGGCCAGGCGCCAGCCGTGGG...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp TGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTCCCACGGCTGGCGCCTaGCCCTCTGAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CHGDHEHQQLPHQQVFAPPTAGA*PSEGAA
Trigger: AGCAGCCCCCTCAGAGGGCCAGGCGCCAGCCGTGGG...AGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTGCCTCTGAGGGGACTTaGCACGGCGGCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCASEGT*HGGWFW
Trigger: CCAGAACCAGCCGCCGTGCCAAGTCCCCTCAGAGGC...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCCTGCAAGGCCGTTGCTaGGGATACAGTGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLLQGRC*GYSAAL
Trigger: TAGGGCTGCACTGTATCCTCAGCAACGGCCTTGCAG...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTGCCCTGAGGCCCCCATaGCATGGGGACCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCALRPP*HGDHEH
Trigger: ATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGC...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR TCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTCATGGTCTCCCCAAGTaGGGAAGCCAGGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCHGLPK*GSQGTQ
Trigger: CTGAGTGCCCTGGCTTCCTCACTTGGGGAGACCATG...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCAGCCCTGAGGCCCCCATaGCATGGGGACCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPALRPP*HGDHEH
Trigger: ATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGC...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
CDS-3UTR CCA 90 bp GGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATGGACCGTGGCTTGGCTaGCGCTCTGACCACCGCGGG +
Preference number: 4 (lower is better)
Translates to: GTMSISSCHISRCLPLHNGPWLG*RSDHRG
Trigger: CCCGCGGTGGTCAGAGCGCCAGCCAAGCCACGGTCC...ATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
3UTR CAA 72 bp CTCAGCCCTCACCCTCCAGCTGCCTTGGGACAGTACTaGCCTGATTCCTCTTTCTGGGGGCGTGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: LSPHPPAALGQY*PDSSFWGRGTL
Trigger: CAGAGTGCCACGCCCCCAGAAAGAGGAATCAGGCAAGTACTGTCCCAAGGCAGCTGGAGGGTGAGGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTGCTGCTGGAACCCCCTaGCTGGAGTACAACACACAG +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCAAGTP*LEYNTQ
Trigger: CTGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGC...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCACAGCTGGCTGTTGCTTaGGCCTCTGAGGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPQLAVA*ASEGTW
Trigger: CCAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTG...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp CTCTCACCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGCCTCGGAGGGGACCGTaGCTTGGCTGGCGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LSPQLGQEEMFKKPHVRLPRRGP*LGWRSD
Trigger: GTCAGAGCGCCAGCCAAGCCACGGTCCCCTCCGAGG...CAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGGTGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CCA 90 bp ACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCGCCTGCGGGTGCTGCTaGAACCCCCTGACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TKPGRTMNLVPCGLGHGLACGCC*NPLTGV
Trigger: TACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGC...GAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCWVVKQ*VQEPRL
Trigger: CAACCTCGGCTCCTGGACTCATTGCTTCACAACCCA...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CCA 90 bp TGCGGGTGCTGCTGGAACCCCCTGACTGGAGTACAACACACAGAGATAGCCCTGCTGCTTAAGCGACGCTaGCAGGAGCTGGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: CGCCWNPLTGVQHTEIALLLKRR*QELVFW
Trigger: CCAGAAGACCAGCTCCTGCCAGCGTCGCTTAAGCAG...CAGGGCTATCTCTGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCAGCTGGCTGTTGCTTaGGCCTCTGAGGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAQLAVA*ASEGTW
Trigger: CCAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTG...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp CCCCTTTCCACACTTAACTCTCTTCTCCCCCAAGGCAAAGCTCCTGTCCTATTTGGACCGTGGCTTGGCTaGCGCTCTGACCACCGCGGG +
Preference number: 4 (lower is better)
Translates to: PLSTLNSLLPQGKAPVLFGPWLG*RSDHRG
Trigger: CCCGCGGTGGTCAGAGCGCCAGCCAAGCCACGGTCC...AAATAGGACAGGAGCTTTGCCTTGGGGGAGAAGAGAGTTAAGTGTGGAAAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGACCCACGGCTGGCGCCTaGCCCTCTGAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARPTAGA*PSEGAA
Trigger: AGCAGCCCCCTCAGAGGGCCAGGCGCCAGCCGTGGG...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGGAACCTTGTCCCCTGTaGGCTAGGGCATGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PHAMGTMSISSCHISRCLEPCPL*ARAWPL
Trigger: GAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAACTTGGCACGGCGGCTaGTTCTGGTCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPATWHGG*FWSSGR
Trigger: CCTGCCAGAAGACCAGAACCAGCCGCCGTGCCAAGT...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTCTCTTTCTGGGGGCGTaGCACTCTGAGCTGTATCTC +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCLFLGA*HSELYL
Trigger: GAGATACAGCTCAGAGTGCCACGCCCCCAGAAAGAG...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGTGTTGCTTGGGCCTCTaGGGGGACTTGGCACGGCGG +
Preference number: 4 (lower is better)
Translates to: SEDNGMTSSKYSRQAALRCCLGL*GDLARR
Trigger: CCGCCGTGCCAAGTCCCCTCAGAGGCCCAAGCAACA...CCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp AGCTCTAGAGCCTGCGGGTGCTGCTGGAACCCCCTGACTGGAGTACAACACACAATGCCATGGGGACCATaGGCATCAGCAGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: SSRACGCCWNPLTGVQHTMPWGP*ASAVAT
Trigger: TGTGGCAACTGCTGATGCTCATGGTCCCCATGGCAT...TGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTTCAAGGCCAGGCCCCTaGAGGGGGTGTGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: NQAWKNNEPCPLWARAWPSRPGP*RGCVSI
Trigger: TATGCTGACACACCCCCTTCAGGGGCCTGGCCTTGA...AGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCCCAGCTGGGCCAGTCTATACCAGGTCCCTaGGGGTTTGAGCCTACTTCA +
Preference number: 4 (lower is better)
Translates to: ARLKGSAFEDLLSPQLGQSIPGP*GFEPTS
Trigger: TGAAGTAGGCTCAAACCCTCAGGGACCTGGTATAGA...CTGGCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383754.7
CDS-3UTR TCA 90 bp TGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGGGGGCGTGGCACTCTaGGCTGTATCTCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: CHGDHEHQQLPHQQVFAPGGVAL*AVSHLD
Trigger: ATCCAGATGAGATACAGCTCAGAGTGCCACGCCCCC...AGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp CCTTCCACTGGCCTCCTAAGTAGAAAAGCGCTGGAAAGGTTGGGGAGGAGTGTGCAGGAGCTGGTCTTCTaGCAGGCGCAGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: PSTGLLSRKALERLGRSVQELVF*QAQQIQ
Trigger: CTGGATCTGCTGCGCCTGCCAGAAGACCAGCTCCTG...CACACTCCTCCCCAACCTTTCCAGCGCTTTTCTACTTAGGAGGCCAGTGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CCA 90 bp CAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGATCTTCCTTCCCACGGCTGGCGCCTaGCCCTCTGAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QFKLLLGHFFFGVGLIFLPTAGA*PSEGAA
Trigger: AGCAGCCCCCTCAGAGGGCCAGGCGCCAGCCGTGGG...AAGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp AGCTCTAGAGCCTGCGGGTGCTGCTGGAACCCCCTGACTGGAGTACAACACACAGGATGTGGTAGATCCTaGTGGAGTGAGGATCGGGGT +
Preference number: 4 (lower is better)
Translates to: SSRACGCCWNPLTGVQHTGCGRS*WSEDRG
Trigger: ACCCCGATCCTCACTCCACCAGGATCTACCACATCC...TGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCTGGTTCTGGTCTTCTaGCAGGCGCAGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: PHAMGTMSISSCHISRCLLVLVF*QAQQIQ
Trigger: CTGGATCTGCTGCGCCTGCCAGAAGACCAGAACCAG...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGTGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PHAMGTMSISSCHISRCLWVVKQ*VQEPRL
Trigger: CAACCTCGGCTCCTGGACTCATTGCTTCACAACCCA...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR TCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAATGCCATGGGGACCATaGGCATCAGCAGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAMPWGP*ASAVAT
Trigger: TGTGGCAACTGCTGATGCTCATGGTCCCCATGGCAT...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR TCA 90 bp CTTCAGTGGTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGAGTGCCATGAGGCCATaGGCCTGTGTCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LQWSGSSGTWRSPEYFCVSAMRP*ACVPRW
Trigger: CCACCTCGGGACACAGGCTCATGGCCTCATGGCACT...CACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTAGCCTGGAAGAACAATaGACCTTGTCCCCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: NNEPCPLWARAWPLLPSTSLEEQ*TLSPVG
Trigger: GCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCT...AGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GGCCATGGATATATACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGACTGAGGTCCAGAGGTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: GHGYIQWCTGTSLCQLTRLRSRG*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAACCTCTGGACCTCAG...TCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGGGTTTTTGGAGAGTCTaGGACCCTCCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: PHAMGTMSISSCHISRCLGFWRV*DPPWPV
Trigger: AACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACC...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CCA 90 bp TCCACAGGAGCACAAGGTGATCTAAGGATCCTCAACTTGACCCAGGGGAAAACTGACGCTGGCAGGAGCTaGTCTTCTGGCAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: STGAQGDLRILNLTQGKTDAGRS*SSGRRS
Trigger: GCTGCGCCTGCCAGAAGACCAGCTCCTGCCAGCGTC...AGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGCCCACGGCTGGCGCCTaGCCCTCTGAGGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRPTAGA*PSEGAA
Trigger: AGCAGCCCCCTCAGAGGGCCAGGCGCCAGCCGTGGG...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp TCAGATGGGCTGAGCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCCAAGGGCCTGAGGAGTaGGAGAGAGCTGCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: SDGLSKAQRQCLRGLALTQGPEE*ERAAFQ
Trigger: CTGAAAAGCAGCTCTCTCCCACTCCTCAGGCCCTTG...GGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGCTCAGCCCATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp TCAGATGGGCTGAGCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCGGATGTGGTAGATCCTaGTGGAGTGAGGATCGGGGT +
Preference number: 4 (lower is better)
Translates to: SDGLSKAQRQCLRGLALTGCGRS*WSEDRG
Trigger: ACCCCGATCCTCACTCCACCAGGATCTACCACATCC...GGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGCTCAGCCCATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 72 bp CACTCAAGGACACAGAGCCATGGCCTTGTTGGATCTTaGGGCATCCGACTGTGCTTGGCCACACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HSRTQSHGLVGS*GIRLCLATPAP
Trigger: AGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCTTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp CTTCAGTGGTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGCACGGCGGCTGGTTCTaGGAGGGCCAAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LQWSGSSGTWRSPEYFCVHGGWF*EGQKKL
Trigger: CAGCTTCTTTTGGCCCTCTCAGAACCAGCCGCCGTG...CACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR TCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGTTGCTTGGGCCTCTaGGGGGACTTGGCACGGCGG +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNICCLGL*GDLARR
Trigger: CCGCCGTGCCAAGTCCCCTCAGAGGCCCAAGCAACA...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTCACAGGAGCACAAGGTaGTCTAAGGATCCTCAACTT +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCHRSTR*SKDPQL
Trigger: AAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTG...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AGAGTGAACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCACTGCAAGGCCGTTGCTaGGGATACAGTGCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: RVNQAWKNNEPCPLWARALQGRC*GYSAAL
Trigger: TAGGGCTGCACTGTATCCTCAGCAACGGCCTTGCAG...TGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCAGGTCCCTGAGGGTTTaGGCCTACTTCAATGCATGC +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFARSLRV*AYFNAC
Trigger: GCATGCATTGAAGTAGGCTCAAACCCTCAGGGACCT...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383754.7
ENST00000447324.5
CDS-3UTR GCA 90 bp TGCGGGTGCTGCTGGAACCCCCTGACTGGAGTACAACACACAGAGATAGCCCTGGGAGTGGGAGAGAGCTaGTTTTCAGGCCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CGCCWNPLTGVQHTEIALGVGES*FSGLFS
Trigger: AGAGAAAAGGCCTGAAAAGCAGCTCTCTCCCACTCC...CAGGGCTATCTCTGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp TGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCCACCACCCCAAAATaGAGGCGGCTCATATCTTCT +
Preference number: 4 (lower is better)
Translates to: CHGDHEHQQLPHQQVFAPATTPK*RRLISS
Trigger: AGAAGATATGAGCCGCCTGCATTTTGGGGTGGTGGC...AGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCAAGCTGATTCTGCTTTaGCACCTGAGGCGCACAGAC +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAKLILL*HLRRTD
Trigger: GTCTGTGCGCCTCAGGTGGCAAAGCAGAATCAGCTT...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp CCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGACCGTGGCTTGGCTaGCGCTCTGACCACCGCGGG +
Preference number: 4 (lower is better)
Translates to: PRLFIQFKLLLGHFFFGVGPWLG*RSDHRG
Trigger: CCCGCGGTGGTCAGAGCGCCAGCCAAGCCACGGTCC...AACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGGGACCGTGGCTTGGCTaGCGCTCTGACCACCGCGGG +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRGPWLG*RSDHRG
Trigger: CCCGCGGTGGTCAGAGCGCCAGCCAAGCCACGGTCC...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp CAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGATCTTCCTTCCTCGGAGGGGACCGTaGCTTGGCTGGCGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: QFKLLLGHFFFGVGLIFLPRRGP*LGWRSD
Trigger: GTCAGAGCGCCAGCCAAGCCACGGTCCCCTCCGAGG...AAGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp CCCCTCACATCAGGAAATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTGCCTGCGGGTGCTGCTaGAACCCCCTGACTGGAGTA +
Preference number: 4 (lower is better)
Translates to: PLTSGNGLLHRERNLGLLACGCC*NPLTGV
Trigger: TACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGC...AAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp AGCTCTAGAGCCTGCGGGTGCTGCTGGAACCCCCTGACTGGAGTACAACACACAGGCTCCTCAGGGACTTaGAGAAGTCCCGAGTATTTT +
Preference number: 4 (lower is better)
Translates to: SSRACGCCWNPLTGVQHTGSSGT*RSPEYF
Trigger: AAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCC...TGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGGCACAAGCACTGAGGAACCTTGTCCCCTGTaGGCTAGGGCATGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: HMRNEEQEQSSKVGTSTEEPCPL*ARAWPL
Trigger: GAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC...CTCAGTGCTTGTGCCCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCGCCTCTGAGGGGACTTaGCACGGCGGCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVASEGT*HGGWFW
Trigger: CCAGAACCAGCCGCCGTGCCAAGTCCCCTCAGAGGC...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAGCCTTGTTGGATCTTTaGGCATCCGACTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAALLDL*ASDCAW
Trigger: CCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGC...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAGCCCAGCAAGCACTATaGGCCTGGCTTTGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAAQQAL*AWLCQN
Trigger: ATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGGGC...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 72 bp CATGGCCTTGTTGGATCTTTGGGCATCCGACTGTGCTaGGCCACACCAGCTCCTAGCACAAGACTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: HGLVGSLGIRLC*ATPAPSTRLFL
Trigger: CAGGAACAGTCTTGTGCTAGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 72 bp ATGGTTGTGCCCACTCAAGGACACAGAGCCATGGCCTaGTTGGATCTTTGGGCATCCGACTGTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: MVVPTQGHRAMA*LDLWASDCAWP
Trigger: TGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCTTGAGTGGGCACAACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGGGCAGCAGTGTATGCTaGAGTGTTCGGAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: PHAMGTMSISSCHISRCLGSSVC*SVRSTS
Trigger: AGAAGTACTCCGAACACTTCAGCATACACTGCTGCC...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR TCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAGGCAGCAGTGTATGCTaGAGTGTTCGGAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAGSSVC*SVRSTS
Trigger: AGAAGTACTCCGAACACTTCAGCATACACTGCTGCC...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR TCA 90 bp GAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGTGTTGCTTGGGCCTCTaGGGGGACTTGGCACGGCGG +
Preference number: 4 (lower is better)
Translates to: EPRLFIQFKLLLGHFFFGCCLGL*GDLARR
Trigger: CCGCCGTGCCAAGTCCCCTCAGAGGCCCAAGCAACA...CCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp CCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGGAGACATGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PQLGQEEMFKKPHVRLETWVVKQ*VQEPRL
Trigger: CAACCTCGGCTCCTGGACTCATTGCTTCACAACCCA...TGTCTCCAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCTCAAAAATTAAAAGTTaGGCTCAGCAACAGCATGCC +
Preference number: 4 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLSKIKS*AQQQHA
Trigger: GGCATGCTGTTGCTGAGCTCAACTTTTAATTTTTGA...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CAGCATGCCAGGGATAGAAGGGAATATTTGGAGGACAACATGTGGGTTGGCACTTCAAGGCCAGGCCCCTaGAGGGGGTGTGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: QHARDRREYLEDNMWVGTSRPGP*RGCVSI
Trigger: TATGCTGACACACCCCCTTCAGGGGCCTGGCCTTGA...AGTGCCAACCCACATGTTGTCCTCCAAATATTCCCTTCTATCCCTGGCATGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTCCTTGGCCGGTTTCTaGCTCATCTCACTTCAAATA +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCSLAGF*LISLQI
Trigger: TATTTGAAGTGAGATGAGTCAGAAACCGGCCAAGGA...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447324.5
CDS-3UTR GCA 90 bp CAGCATGCCAGGGATAGAAGGGAATATTTGGAGGACAACATGTGGGTTGGCACTAGGGCTCTCCTCTGCTaGTTAAGCGACGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: QHARDRREYLEDNMWVGTRALLC*LSDAGR
Trigger: CCTGCCAGCGTCGCTTAAGCAGCAGAGGAGAGCCCT...AGTGCCAACCCACATGTTGTCCTCCAAATATTCCCTTCTATCCCTGGCATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR GCA 90 bp AATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAGAGAGAAAGCCAGGGCTCTCCTCTaGTGCTTAAGCGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: NWVQTPHIRKWPPTQREKARALL*CLSDAG
Trigger: GCCAGCGTCGCTTAAGCAGCAGAGGAGAGCCCTGGC...TTTCTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR GCA 90 bp TGCGGGTGCTGCTGGAACCCCCTGACTGGAGTACAACACACAGAGATAGCCCTGATGAGCATCAGCAGTTaGCACATCAGCAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: CGCCWNPLTGVQHTEIALMSISS*HISRCL
Trigger: CAAACACCTGCTGATGTGGCAACTGCTGATGCTCAT...CAGGGCTATCTCTGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCGCCCTGAGGCCCCCATaGCATGGGGACCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVALRPP*HGDHEH
Trigger: ATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGC...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR GCA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGGAGATGGGAAGTCAATaGCCAACCCTGTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: PHAMGTMSISSCHISRCLEMGSQ*PTLSHH
Trigger: ATGATGGGACAGGGTTGGGCATTGACTTCCCATCTC...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCACTTGTGACTCTCCGATaGCCTAATGAAACCCTGCTT +
Preference number: 4 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPLVTLR*PNETLL
Trigger: AAGCAGGGTTTCATTAGGGCATCGGAGAGTCACAAG...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp TTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGCCTCGGAGGGGACCGTaGCTTGGCTGGCGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LFIQFKLLLGHFFFGVGLPRRGP*LGWRSD
Trigger: GTCAGAGCGCCAGCCAAGCCACGGTCCCCTCCGAGG...CAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp CGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGCCTCGGAGGGGACCGTaGCTTGGCTGGCGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: RGCSFSLNSSLVTSSLGLPRRGP*LGWRSD
Trigger: GTCAGAGCGCCAGCCAAGCCACGGTCCCCTCCGAGG...CAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGCCTCGGAGGGGACCGTaGCTTGGCTGGCGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRPRRGP*LGWRSD
Trigger: GTCAGAGCGCCAGCCAAGCCACGGTCCCCTCCGAGG...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp GGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATGGACAACATGTGGGTTaGCACTTGAGCCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: GTMSISSCHISRCLPLHNGQHVG*HLSHPD
Trigger: GTCAGGGTGGCTCAAGTGCCAACCCACATGTTGTCC...ATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCCTCATAGAAGGGAATATTTaGAGGACAACATGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: EPCPLWARAWPLLPSTGLIEGNI*RTTCGL
Trigger: CAACCCACATGTTGTCCTCCAAATATTCCCTTCTAT...GAGGCCAGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp AACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTGGCTCCTCAGGGACTTaGAGAAGTCCCGAGTATTTT +
Preference number: 4 (lower is better)
Translates to: NNEPCPLWARAWPLLPSTGSSGT*RSPEYF
Trigger: AAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCC...AGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGTCTTCCTTTTCAATCTaGTCTTCTGGCAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: PHAMGTMSISSCHISRCLSSFSI*SSGRRS
Trigger: GCTGCGCCTGCCAGAAGACCAGATTGAAAAGGAAGA...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383754.7
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CCA 90 bp TCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGGCATCCGACTGTGCTTaGCCACACCAGCTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: SEDNGMTSSKYSRQAALRASDCA*PHQLLA
Trigger: TGCTAGGAGCTGGTGTGGCCAAGCACAGTCGGATGC...CCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGTGTTGCTTGGGCCTCTaGGGGGACTTGGCACGGCGG +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRCCLGL*GDLARR
Trigger: CCGCCGTGCCAAGTCCCCTCAGAGGCCCAAGCAACA...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR TCA 90 bp CTTCAGTGGTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGATGCCATGGGGACCATaGGCATCAGCAGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: LQWSGSSGTWRSPEYFCVMPWGP*ASAVAT
Trigger: TGTGGCAACTGCTGATGCTCATGGTCCCCATGGCAT...CACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTCACAGGAGCACAAGGTaGTCTAAGGATCCTCAACTT +
Preference number: 4 (lower is better)
Translates to: NNEPCPLWARAWPLLPSTHRSTR*SKDPQL
Trigger: AAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTG...AGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATAGGTCCCTGAGGGTTTaGGCCTACTTCAATGCATGC +
Preference number: 4 (lower is better)
Translates to: GTMSISSCHISRCLPLHNRSLRV*AYFNAC
Trigger: GCATGCATTGAAGTAGGCTCAAACCCTCAGGGACCT...ATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383754.7
ENST00000447324.5
CDS-3UTR TCA 90 bp CCAGCAAGCACTATGGGCCTGGCTTTGCCAAAATCTAAAACAGGCCAAAGGGATGGGACAGTACTTGCCTaGTTCCTCTTTCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: PASTMGLALPKSKTGQRDGTVLA*FLFLGA
Trigger: CGCCCCCAGAAAGAGGAATCAGGCAAGTACTGTCCC...ATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTCTAGAGCCTGCGGGTaGTGCTGGAACCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNISRACG*CWNPLT
Trigger: AGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGA...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTGCCTACTTCAATGCATaGAGAATATATAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCAYFNA*RIYRER
Trigger: CCTCTCCCTATATATTCTGCATGCATTGAAGTAGGC...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000383754.7
ENST00000447324.5
CDS-3UTR GCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCTATGGGCCTGGCTTTaGCAAAATCTAAAACAGGCC +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFALWAWL*QNLKQA
Trigger: GGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAG...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCCAGCTGGCTGTTGCTTaGGCCTCTGAGGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVQLAVA*ASEGTW
Trigger: CCAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTG...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp CTCTCACCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGAGCCATGAAAGACCCTaGAGGCCTGTGCATATCCTG +
Preference number: 4 (lower is better)
Translates to: LSPQLGQEEMFKKPHVRLSHERP*RPVHIL
Trigger: CAGGATATGCACAGGCCTCCAGGGTCTTTCATGGCT...CAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGGTGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp TCAGATGGGCTGAGCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCCTGTCCCATCATAATTaGGTTCAGACCCCTCACATC +
Preference number: 4 (lower is better)
Translates to: SDGLSKAQRQCLRGLALTLSHHN*VQTPHI
Trigger: GATGTGAGGGGTCTGAACCCAATTATGATGGGACAG...GGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGCTCAGCCCATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCAGCCTCTGAGGGGACTTaGCACGGCGGCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VVQFSALPVSPDCNPKVSASEGT*HGGWFW
Trigger: CCAGAACCAGCCGCCGTGCCAAGTCCCCTCAGAGGC...TGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424090.5
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGGCCTCTGAGGGGACTTaGCACGGCGGCTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRASEGT*HGGWFW
Trigger: CCAGAACCAGCCGCCGTGCCAAGTCCCCTCAGAGGC...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441980.6
3UTR CAA 72 bp GGCCATGGATATATACAGTGGTGCACTGGCACCAGCTaGTGCCAGCTGACGAGAGTCAATTGTGTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GHGYIQWCTGTS*CQLTRVNCVLL
Trigger: GAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp CCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGGAGACAATAGTTCAGATGGGCTaGGCAAGGCTCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PQLGQEEMFKKPHVRLETIVQMG*ARLKGS
Trigger: ACTGCCTTTGAGCCTTGCTCAGCCCATCTGAACTAT...TGTCTCCAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AACTATGGAAACAGCACCGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGTGCCATGAGGCCATaGGCCTGTGTCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NYGNSTEFSREAPLRRYLSAMRP*ACVPRW
Trigger: CCACCTCGGGACACAGGCTCATGGCCTCATGGCACT...CAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCGGTGCTGTTTCCATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAGAATCAAAAGCAGAGTaGACCAAGCCTGGAAGAACA +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAESKAE*TKPGRT
Trigger: TGTTCTTCCAGGCTTGGTTCACTCTGCTTTTGATTC...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCGGTGGGCACAAGCACTaGGAATATATCACAACATAC +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAGGHKH*EYITTY
Trigger: GTATGTTGTGATATATTCTCAGTGCTTGTGCCCACC...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACGCACACACCAGTCCACAGGAGCACAAGGTCTTTGGGGTTGGCCTaGTCTTCCTTTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTPVHRSTRSLGLA*SSFSIW
Trigger: CCAGATTGAAAAGGAAGATCAGGCCAACCCCAAAGA...CCTTGTGCTCCTGTGGACTGGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383754.7
CDS-3UTR TCA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCACAGAAGACAATGGGATaGCATCTTCAAAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPQKTMG*HLQSTP
Trigger: TGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTG...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
CDS-3UTR TCA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCATGTGACACTCCCTTCTaGCTGTTTTGTCTCCTTATA +
Preference number: 4 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPCDTPF*LFCLLI
Trigger: TATAAGGAGACAAAACAGTCAGAAGGGAGTGTCACA...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAGCAGGTGTTTGCCCCTaGATAATATTTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAAGVCP*IIFEAR
Trigger: TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGC...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACACGCACACACCAGTCCACAGGAGCACAAGGATGAGCATCAGCAGTTaGCACATCAGCAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTPVHRSTRMSISS*HISRCL
Trigger: CAAACACCTGCTGATGTGGCAACTGCTGATGCTCAT...CCTTGTGCTCCTGTGGACTGGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp ATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGATCTTCGCCCTGAGGCCCCCATaGCATGGGGACCATGAGCAT +
Preference number: 4 (lower is better)
Translates to: IQFKLLLGHFFFGVGLIFALRPP*HGDHEH
Trigger: ATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGC...GAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR GCA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCAAGGCTCAAAGGCAGTaGCTTCGAGGACTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGKAQRQ*LRGLAL
Trigger: GAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTT...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp CCCATCATAATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGATCCAAAAGGGGCTCCTaGAAGGCCGTTGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PIIIGFRPLTSGNGLLHRSKRGS*KAVAED
Trigger: ATCCTCAGCAACGGCCTTGCAGGAGCCCCTTTTGGA...TCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATTATGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTAGACCTTATGGCTTCTaGTTATTGGGCAATATGCAA +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCRPYGF*LLGNMQ
Trigger: TTGCATATTGCCCAATAAGCAGAAGCCATAAGGTCT...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCAACCGGCTTTACAGTGTaGAGATCCCATCAATTCTTT +
Preference number: 4 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPTGFTV*RSHQFF
Trigger: AAAGAATTGATGGGATCTGCACACTGTAAAGCCGGT...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCTGTTCGGAGTACTTCTaGTTTTTGGAGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFACSEYF*FLESLG
Trigger: TCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACA...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CCA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGTGTTCGGAGTACTTCTaGTTTTTGGAGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PHAMGTMSISSCHISRCLCSEYF*FLESLG
Trigger: TCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACA...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CCA 90 bp TGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTTGTTCGGAGTACTTCTaGTTTTTGGAGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: CHGDHEHQQLPHQQVFAPCSEYF*FLESLG
Trigger: TCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACA...AGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATGTTCGGAGTACTTCTaGTTTTTGGAGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPACSEYF*FLESLG
Trigger: TCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACA...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CCA 90 bp AGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCAGGGCCAAAAGAAGCTaGAGGCGGGAGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLFIQFKLLLGHFFFGVGRAKRS*RREPGL
Trigger: GAGCCCTGGCTCCCGCCTCCAGCTTCTTTTGGCCCT...GCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CCA 90 bp CCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGGAGACACTGGAACCCCCTGACTaGAGTACAACACACAGAGAT +
Preference number: 4 (lower is better)
Translates to: PQLGQEEMFKKPHVRLETLEPPD*STTHRD
Trigger: ATCTCTGTGTGTTGTACTCCAGTCAGGGGGTTCCAG...TGTCTCCAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAGGACAACATGTGGGTTaGCACTTGAGCCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: VFKGSTSETIFEQKAPGQGQHVG*HLSHPD
Trigger: GTCAGGGTGGCTCAAGTGCCAACCCACATGTTGTCC...TTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGCTCTCACCCCAGCTaGGCCAGGAGGAGATGTTCA +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNICSHPS*ARRRCS
Trigger: TGAACATCTCCTCCTGGCCCAGCTGGGGTGAGAGCA...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTAGCCAGGGAAAGCACTaGGGGGACCAGGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFSQGKH*GDQASD
Trigger: GTCTGAGGCCTGGTCCCCCCAGTGCTTTCCCTGGCT...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTCTTCAATCCCGACTTTaGGAGCCAATAAACAATGTA +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCLQSRL*EPINNV
Trigger: TACATTGTTTATTGGCTCCCAAAGTCGGGATTGAAG...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp AGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGACTTGGCACGGCGGCTaGTTCTGGTCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRGCSFSLNSSLVTSSLGTWHGG*FWSSGR
Trigger: CCTGCCAGAAGACCAGAACCAGCCGCCGTGCCAAGT...CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp TCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGACCCTCCAGCTGCCTTaGGACAGTACTTGCCTGATT +
Preference number: 4 (lower is better)
Translates to: SEDNGMTSSKYSRQAALRTLQLP*DSTCLI
Trigger: AATCAGGCAAGTACTGTCCCAAGGCAGCTGGAGGGT...CCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATTATTTGGTGTGGGTTaGGCTGGGCCAGTAATTTGT +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPALFGVG*AGPVIC
Trigger: ACAAATTACTGGCCCAGCCCAACCCACACCAAATAA...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp TCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGTTGAAATCTGCATCATaGTCCGGGCGTGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SEDNGMTSSKYSRQAALRLKSAS*SGRGGS
Trigger: TGAGCCACCACGCCCGGACCATGATGCAGATTTCAA...CCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TTGGACCAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGTGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LDQSITCGMKSKNRVPRWWVVKQ*VQEPRL
Trigger: CAACCTCGGCTCCTGGACTCATTGCTTCACAACCCA...CCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCATGCCATGGGGACCATaGGCATCAGCAGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVMPWGP*ASAVAT
Trigger: TGTGGCAACTGCTGATGCTCATGGTCCCCATGGCAT...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp CAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGATCTTCCTTGCTGCTGGAACCCCCTaGCTGGAGTACAACACACAG +
Preference number: 4 (lower is better)
Translates to: QFKLLLGHFFFGVGLIFLAAGTP*LEYNTQ
Trigger: CTGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGC...AAGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR TCA 90 bp TGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTAGAAAGGACTGCAGGTaGAACAAAAAGAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: CHGDHEHQQLPHQQVFAPRKDCR*NKKNCA
Trigger: TGCACAGTTCTTTTTGTTTCACCTGCAGTCCTTTCT...AGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAAGCCAATTATGGCTCTaGCTATGGGCTGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARSQLWL*LWAGTG
Trigger: CCCTGTGCCAGCCCATAGTCAGAGCCATAATTGGCT...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp ATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCAGGTGGTGAAGTGCCATaGGGCCATGAGCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: MASYTEREILDCLTSYNSGGEVP*GHEPVS
Trigger: GGACACAGGCTCATGGCCTCATGGCACTTCACCACC...TGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp TCCACAGGAGCACAAGGTGATCTAAGGATCCTCAACTTGACCCAGGGGAAAACTCACTCCACCATCAGATaGAAATGTGGAGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: STGAQGDLRILNLTQGKTHSTIR*KCGEAS
Trigger: GCTGGCCTCTCCACATTTTCATCTGATGGTGGAGTG...AGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCACATGTATCTTCAGATTaGAGAAACTTGAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAHVSSD*RNLSPW
Trigger: CCACGGACTCAAGTTTCTTCAATCTGAAGATACATG...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
CDS-3UTR TCA 90 bp TCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCTAGCCCCATACCCTaGACAAGACTTCATCTGACA +
Preference number: 4 (lower is better)
Translates to: SEDNGMTSSKYSRQAALRPSPIP*TRLHLT
Trigger: TGTCAGATGAAGTCTTGTTCAGGGTATGGGGCTAGG...CCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp GACACAGAGCCATGGCCTTGTTGGATCTTTGGGCATCCGACTGTGCTTGGCCACATCATGTTCATAGCTTaGAATCTGCATCATGGTCCG +
Preference number: 4 (lower is better)
Translates to: DTEPWPCWIFGHPTVLGHIMFIA*NLHHGP
Trigger: CGGACCATGATGCAGATTTCAAGCTATGAACATGAT...GTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGGTTAGCACCAATATCTaGAAGGAAGGAAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SEDNGMTSSKYSRQAALRVSTNI*KEGSPS
Trigger: GCTGGGGCTTCCTTCCTTTCAGATATTGGTGCTAAC...CCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTCAACTGGCATTATTTTaGCCTGTTTTTCCACTTGAT +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCQLALF*PVFPLD
Trigger: ATCAAGTGGAAAAACAGGTCAAAATAATGCCAGTTG...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp TGCGGGTGCTGCTGGAACCCCCTGACTGGAGTACAACACACAGAGATAGCCCTGACATCAGCAGGTGTTTaGCCCTGCATAATATTTGAA +
Preference number: 4 (lower is better)
Translates to: CGCCWNPLTGVQHTEIALTSAGV*PCIIFE
Trigger: TTCAAATATTATGCAGGGGCAAACACCTGCTGATGT...CAGGGCTATCTCTGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp CCCATCATAATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAAAGGCTCAAAGGCAGTaGCTTCGAGGACTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PIIIGFRPLTSGNGLLHRKAQRQ*LRGLAL
Trigger: GAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTT...TCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATTATGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp TTGGACCAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGCTTCTGGTGGTGAAGTaGCATGAGGCCATGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LDQSITCGMKSKNRVPRWLLVVK*HEAMSL
Trigger: CAGGCTCATGGCCTCATGGCACTTCACCACCAGAAG...CCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp AACAGAGAGAAGAGATGGGAAGTCAATGCCCAACCCTGTCCCATCATAATTGGGGTCTGGGACCCTCCTTaGCCGGTTTCTGACTCATCT +
Preference number: 4 (lower is better)
Translates to: NREKRWEVNAQPCPIIIGVWDPP*PVSDSS
Trigger: AGATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGAC...CCCAATTATGATGGGACAGGGTTGGGCATTGACTTCCCATCTCTTCTCTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTGGTTTTTGGAGAGTCTaGGACCCTCCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNIGFWRV*DPPWPV
Trigger: AACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACC...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGCAGCTGGCTGTTGCTTaGGCCTCTGAGGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRQLAVA*ASEGTW
Trigger: CCAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTG...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp TCCACAGGAGCACAAGGTGATCTAAGGATCCTCAACTTGACCCAGGGGAAAACTGGCCTGTGCATATCCTaGAGAAGAAAGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: STGAQGDLRILNLTQGKTGLCIS*RRKDCR
Trigger: CCTGCAGTCCTTTCTTCTCCAGGATATGCACAGGCC...AGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAAGCCATGAAAGACCCTaGAGGCCTGTGCATATCCTG +
Preference number: 4 (lower is better)
Translates to: VFKGSTSETIFEQKAPGQSHERP*RPVHIL
Trigger: CAGGATATGCACAGGCCTCCAGGGTCTTTCATGGCT...TTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GTTGGCAATCATGGAGTTTACGTTAGGAGGGGAAAAGAGCCAAGCATTAAACAAAGCCAGGGAAAGCACTaGGGGGACCAGGCCTCAGAC +
Preference number: 4 (lower is better)
Translates to: VGNHGVYVRRGKEPSIKQSQGKH*GDQASD
Trigger: GTCTGAGGCCTGGTCCCCCCAGTGCTTTCCCTGGCT...TTGTTTAATGCTTGGCTCTTTTCCCCTCCTAACGTAAACTCCATGATTGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp AGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAGATCTTGGACCACCTCACATCAGGAAATaGCCTCCTACACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: STSETIFEQKAPGQDLGPPHIRK*PPTQRE
Trigger: CTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGG...TGGTCCAAGATCTTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp TCAGATGGGCTGAGCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCAGAGTGAACCAAGCCTaGAAGAACAATGAACCTTGT +
Preference number: 4 (lower is better)
Translates to: SDGLSKAQRQCLRGLALTRVNQA*KNNEPC
Trigger: ACAAGGTTCATTGTTCTTCCAGGCTTGGTTCACTCT...GGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGCTCAGCCCATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCCCAGCTGGGCCAGTCAACAAGTGTTTATTaGTTCTTACTAGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: ARLKGSAFEDLLSPQLGQSTSVY*FLLVSG
Trigger: TCCTGACACTAGTAAGAACCAATAAACACTTGTTGA...CTGGCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp TTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGACTTGGCACGGCGGCTaGTTCTGGTCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LFIQFKLLLGHFFFGVGLTWHGG*FWSSGR
Trigger: CCTGCCAGAAGACCAGAACCAGCCGCCGTGCCAAGT...CAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGACTTGGCACGGCGGCTaGTTCTGGTCTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRTWHGG*FWSSGR
Trigger: CCTGCCAGAAGACCAGAACCAGCCGCCGTGCCAAGT...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCAGAGGTCAGAAGACAATaGGATGACATCTTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPEVRRQ*DDIFKV
Trigger: TACTTTGAAGATGTCATCCCATTGTCTTCTGACCTC...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
CDS-3UTR CCA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATACCTGATTCCTCTTTCTaGGGGCGTGGCACTCTGAGC +
Preference number: 4 (lower is better)
Translates to: QITSLNFTATTPKCRRLIPDSSF*GRGTLS
Trigger: GCTCAGAGTGCCACGCCCCCAGAAAGAGGAATCAGG...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTCAGATATCCCATCATTaGAAACACTTCATAGTAGAG +
Preference number: 4 (lower is better)
Translates to: GPHAMGTMSISSCHISRCQISHH*KHFIVE
Trigger: CTCTACTATGAAGTGTTTCCAATGATGGGATATCTG...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp GACACAGAGCCATGGCCTTGTTGGATCTTTGGGCATCCGACTGTGCTTGGCCACATTAAATTTCTTATTTaGTGTGGGTTGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DTEPWPCWIFGHPTVLGHIKFLI*CGLGWA
Trigger: GGCCCAGCCCAACCCACACCAAATAAGAAATTTAAT...GTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCAAATGTGTGTCTTCTaGATGATGTGGAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAQMCVF*MMWKRE
Trigger: CTCTCTCTTCCACATCATCCAGAAGACACACATTTG...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 72 bp CTAGGATCATTTGGGAGAGGAGCTGGGGGTAGGGCATaGTGGTTGAAGCCAGATAACATTCCCAAGGTCACA +
Preference number: 4 (lower is better)
Translates to: LGSFGRGAGGRA*WLKPDNIPKVT
Trigger: TGTGACCTTGGGAATGTTATCTGGCTTCAACCACAATGCCCTACCCCCAGCTCCTCTCCCAAATGATCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 72 bp ACCGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTaGAGCAGAAGGCACCTGGCCAAGATCTTGGACCAG +
Preference number: 4 (lower is better)
Translates to: TEFSREAPLRRY*SRRHLAKILDQ
Trigger: CTGGTCCAAGATCTTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CCCCTCACATCAGGAAATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTAAAAGAACTGTGCATTaGGCTCTAGAGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: PLTSGNGLLHRERNLGLLKRTVH*ALEPAG
Trigger: ACCCGCAGGCTCTAGAGCTCAATGCACAGTTCTTTT...AAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACACGCACACACCAGTCCACAGGAGCACAAGGAGAAAGGACTGCAGGTaGAACAAAAAGAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHTPVHRSTRRKDCR*NKKNCA
Trigger: TGCACAGTTCTTTTTGTTTCACCTGCAGTCCTTTCT...CCTTGTGCTCCTGTGGACTGGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CTTCAGTGGTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGGTAGGGCATTGTGGTTaGAGCCAGATAACATTCCCA +
Preference number: 4 (lower is better)
Translates to: LQWSGSSGTWRSPEYFCVVGHCG*SQITFP
Trigger: TGGGAATGTTATCTGGCTTCAACCACAATGCCCTAC...CACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCGTAGGGCATTGTGGTTaGAGCCAGATAACATTCCCA +
Preference number: 4 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGVGHCG*SQITFP
Trigger: TGGGAATGTTATCTGGCTTCAACCACAATGCCCTAC...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGGGAGCCAATAAAGGTGGTGAAGTGCCATaGGGCCATGAGCCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: DSLPASFHSSIPTLGANKGGEVP*GHEPVS
Trigger: GGACACAGGCTCATGGCCTCATGGCACTTCACCACC...TTTATTGGCTCCCAAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp TGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTAGAAACATTTCTACCTaGAGACTCCATGCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: CHGDHEHQQLPHQQVFAPRNIST*RLHAVK
Trigger: TTTGACTGCATGGAGTCTTCAGGTAGAAATGTTTCT...AGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp CCAGCAAGCACTATGGGCCTGGCTTTGCCAAAATCTAAAACAGGCCAAAGGGATCATCCTATGGACTTGTaGCTCTCCGATGCCCTAATG +
Preference number: 4 (lower is better)
Translates to: PASTMGLALPKSKTGQRDHPMDL*LSDALM
Trigger: CATTAGGGCATCGGAGAGTCACAAGTCCATAGGATG...ATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp ACCTCACCATGTTATTCCCAGGAATGTAATGGCCTCAGATATCCCATCATTGGATTCTGCTTTGCCACCTaGGGCGCACAGACACGTGGT +
Preference number: 4 (lower is better)
Translates to: TSPCYSQECNGLRYPIIGFCFAT*GAQTRG
Trigger: ACCACGTGTCTGTGCGCCTCAGGTGGCAAAGCAGAA...TCCAATGATGGGATATCTGAGGCCATTACATTCCTGGGAATAACATGGTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGACATCAGCAGGTGTTTaGCCCTGCATAATATTTGAA +
Preference number: 4 (lower is better)
Translates to: PHAMGTMSISSCHISRCLTSAGV*PCIIFE
Trigger: TTCAAATATTATGCAGGGGCAAACACCTGCTGATGT...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR GCA 90 bp AACAGAGAGAAGAGATGGGAAGTCAATGCCCAACCCTGTCCCATCATAATTGGGGACCCTGGAGGCCTGTaGATATCCTGGAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: NREKRWEVNAQPCPIIIGDPGGL*ISWRRK
Trigger: CTTTCTTCTCCAGGATATGCACAGGCCTCCAGGGTC...CCCAATTATGATGGGACAGGGTTGGGCATTGACTTCCCATCTCTTCTCTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp AGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGCTTCTGGTGGTGAAGTaGCATGAGGCCATGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SRGCSFSLNSSLVTSSLGLLVVK*HEAMSL
Trigger: CAGGCTCATGGCCTCATGGCACTTCACCACCAGAAG...CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR GCA 90 bp GTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAGAGATGGGAAGTCAATaGCCAACCCTGTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: VFKGSTSETIFEQKAPGQEMGSQ*PTLSHH
Trigger: ATGATGGGACAGGGTTGGGCATTGACTTCCCATCTC...TTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATGCAGAAGGATTCATTaGCTGCATCTTTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPACRRIH*LHLFTL
Trigger: AAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCA...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp AACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTTGCAGAAGGATTCATTaGCTGCATCTTTTCACTCTT +
Preference number: 4 (lower is better)
Translates to: NNEPCPLWARAWPLLPSTCRRIH*LHLFTL
Trigger: AAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCA...AGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp ACCTCACCATGTTATTCCCAGGAATGTAATGGCCTCAGATATCCCATCATTGGATTGGGCATCCGACTGTaGTTGGCCACACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TSPCYSQECNGLRYPIIGLGIRL*LATPAP
Trigger: AGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAA...TCCAATGATGGGATATCTGAGGCCATTACATTCCTGGGAATAACATGGTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCATGCCAGAAATTCAGGTaGGTTTTTCAGGCAATTTTA +
Preference number: 4 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPCQKFR*VFQAIL
Trigger: TAAAATTGCCTGAAAAACGCACCTGAATTTCTGGCA...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp CAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGATCTTCCTTGGTTTTTGGAGAGTCTaGGACCCTCCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: QFKLLLGHFFFGVGLIFLGFWRV*DPPWPV
Trigger: AACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACC...AAGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp AGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGGGTTTTTGGAGAGTCTaGGACCCTCCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: SRGCSFSLNSSLVTSSLGGFWRV*DPPWPV
Trigger: AACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACC...CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCATAGAAGGGAATATTTaGAGGACAACATGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAIEGNI*RTTCGL
Trigger: CAACCCACATGTTGTCCTCCAAATATTCCCTTCTAT...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp AGCTCTAGAGCCTGCGGGTGCTGCTGGAACCCCCTGACTGGAGTACAACACACACATCTCTGGATCATATaGAAGCCTAATATCTTACTC +
Preference number: 4 (lower is better)
Translates to: SSRACGCCWNPLTGVQHTHLWII*KPNILL
Trigger: GAGTAAGATATTAGGCTTCCATATGATCCAGAGATG...TGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp ATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCATGCTCTCACCCCAGCTaGGCCAGGAGGAGATGTTCA +
Preference number: 4 (lower is better)
Translates to: MASYTEREILDCLTSYNSCSHPS*ARRRCS
Trigger: TGAACATCTCCTCCTGGCCCAGCTGGGGTGAGAGCA...TGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CTTCAGTGGTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGGGGGGTAGGGCATTGTaGTTGAAGCCAGATAACATT +
Preference number: 4 (lower is better)
Translates to: LQWSGSSGTWRSPEYFCVGGRAL*LKPDNI
Trigger: AATGTTATCTGGCTTCAACCACAATGCCCTACCCCC...CACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGGCACAAGCACTGAGCTGTCCCATCATAATTaGGTTCAGACCCCTCACATC +
Preference number: 4 (lower is better)
Translates to: HMRNEEQEQSSKVGTSTELSHHN*VQTPHI
Trigger: GATGTGAGGGGTCTGAACCCAATTATGATGGGACAG...CTCAGTGCTTGTGCCCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp ATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGATCTTCCTGGTTCTGGTCTTCTaGCAGGCGCAGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: IQFKLLLGHFFFGVGLIFLVLVF*QAQQIQ
Trigger: CTGGATCTGCTGCGCCTGCCAGAAGACCAGAACCAG...GAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp GTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCACTGGTTCTGGTCTTCTaGCAGGCGCAGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: VVQFSALPVSPDCNPKVSLVLVF*QAQQIQ
Trigger: CTGGATCTGCTGCGCCTGCCAGAAGACCAGAACCAG...TGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424090.5
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGCTGGTTCTGGTCTTCTaGCAGGCGCAGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRLVLVF*QAQQIQ
Trigger: CTGGATCTGCTGCGCCTGCCAGAAGACCAGAACCAG...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCGAGGTCAGAAGACAATaGGATGACATCTTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAEVRRQ*DDIFKV
Trigger: TACTTTGAAGATGTCATCCCATTGTCTTCTGACCTC...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
CDS-3UTR CCA 90 bp GACACAGAGCCATGGCCTTGTTGGATCTTTGGGCATCCGACTGTGCTTGGCCACTTCCCTAGATATTCATaGTCAAACTTACACCTTGGC +
Preference number: 4 (lower is better)
Translates to: DTEPWPCWIFGHPTVLGHFPRYS*SNLHLG
Trigger: GCCAAGGTGTAAGTTTGACCATGAATATCTAGGGAA...GTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 72 bp CCCAAAATGCAGGCGGCTCATATCTTCTCTTCTTTCTaGACCGTCAGCTCAGCCATCCTGAAACCGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PKMQAAHIFSSF*TVSSAILKPAL
Trigger: TAAAGCCGGTTTCAGGATGGCTGAGCTGACGGTCAAGAAAGAAGAGAAGATATGAGCCGCCTGCATTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TTGGACCAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGGGCAGCAGTGTATGCTaGAGTGTTCGGAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: LDQSITCGMKSKNRVPRWGSSVC*SVRSTS
Trigger: AGAAGTACTCCGAACACTTCAGCATACACTGCTGCC...CCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCGGCAGCAGTGTATGCTaGAGTGTTCGGAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVGSSVC*SVRSTS
Trigger: AGAAGTACTCCGAACACTTCAGCATACACTGCTGCC...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp TTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGTGGGTTGTGAAGCAATaGGTCCAGGAGCCGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LFIQFKLLLGHFFFGVGLWVVKQ*VQEPRL
Trigger: CAACCTCGGCTCCTGGACTCATTGCTTCACAACCCA...CAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTAAAAGAACTGTGCATTaGGCTCTAGAGCCTGCGGGT +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNIKRTVH*ALEPAG
Trigger: ACCCGCAGGCTCTAGAGCTCAATGCACAGTTCTTTT...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATCCCAGCTGGAATTTaGATAGAGATGGATTCACTC +
Preference number: 4 (lower is better)
Translates to: GTMSISSCHISRCLPLHNIPAGI*IEMDSL
Trigger: GAGTGAATCCATCTCTATTCAAATTCCAGCTGGGAT...ATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CTCTCACCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGATCCCAGCTGGAATTTaGATAGAGATGGATTCACTC +
Preference number: 4 (lower is better)
Translates to: LSPQLGQEEMFKKPHVRLIPAGI*IEMDSL
Trigger: GAGTGAATCCATCTCTATTCAAATTCCAGCTGGGAT...CAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGGTGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGATCTATACCAGGTCCCTaGGGGTTTGAGCCTACTTCA +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARSIPGP*GFEPTS
Trigger: TGAAGTAGGCTCAAACCCTCAGGGACCTGGTATAGA...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383754.7
ENST00000447324.5
CDS-3UTR TCA 90 bp TGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGAACAAGACTTCATCTaGCATTGCCCCTATATTTTT +
Preference number: 4 (lower is better)
Translates to: CHGDHEHQQLPHQQVFAPEQDFI*HCPYIF
Trigger: AAAAATATAGGGGCAATGTCAGATGAAGTCTTGTTC...AGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCCTATATTTTTACTTaGCTCTTAAACTTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAPYIFT*LLNLAR
Trigger: CCTAGCCAAGTTTAAGAGGCAAGTAAAAATATAGGG...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTCCTTGGGACAGTACTTaGCTGATTCCTCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNIPWDST*LIPLSG
Trigger: CCCAGAAAGAGGAATCAGGCAAGTACTGTCCCAAGG...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCACTTTTCAGTAAACAATaGCAGAAATTCAGGTGCGTT +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPALFSKQ*QKFRCV
Trigger: AACGCACCTGAATTTCTGGCATTGTTTACTGAAAAG...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp GAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCACCCCTTTCCACACTTGGTTTTTGGAGAGTCTaGGACCCTCCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: EREILDCLTSYNSPLSTLGFWRV*DPPWPV
Trigger: AACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACC...AAGTGTGGAAAGGGGTGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGGTTTTTGGAGAGTCTaGGACCCTCCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFGFWRV*DPPWPV
Trigger: AACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACC...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGTTTTTGGAGAGTCTaGGACCCTCCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: PRLFIQFKLLLGHFFFGVGFWRV*DPPWPV
Trigger: AACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACC...AACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGGGTTTTTGGAGAGTCTaGGACCCTCCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRGFWRV*DPPWPV
Trigger: AACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACC...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp CAGCATGCCAGGGATAGAAGGGAATATTTGGAGGACAACATGTGGGTTGGCACTTGGTCACTTCTTCTTTaGGGTTGGCCTGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: QHARDRREYLEDNMWVGTWSLLL*GWPDLP
Trigger: AGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCA...AGTGCCAACCCACATGTTGTCCTCCAAATATTCCCTTCTATCCCTGGCATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp AATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAGAGAGAAACTGGAACCCCCTGACTaGAGTACAACACACAGAGAT +
Preference number: 4 (lower is better)
Translates to: NWVQTPHIRKWPPTQREKLEPPD*STTHRD
Trigger: ATCTCTGTGTGTTGTACTCCAGTCAGGGGGTTCCAG...TTTCTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTCAAGGGCCTGAGGAGTaGGAGAGAGCTGCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFQGPEE*ERAAFQ
Trigger: CTGAAAAGCAGCTCTCTCCCACTCCTCAGGCCCTTG...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CCCATCATAATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAGGGGGTAGGGCATTGTaGTTGAAGCCAGATAACATT +
Preference number: 4 (lower is better)
Translates to: PIIIGFRPLTSGNGLLHRGGRAL*LKPDNI
Trigger: AATGTTATCTGGCTTCAACCACAATGCCCTACCCCC...TCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATTATGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGACCTCACATCAGGAAATaGCCTCCTACACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARPHIRK*PPTQRE
Trigger: CTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGG...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CAGCATGCCAGGGATAGAAGGGAATATTTGGAGGACAACATGTGGGTTGGCACTAACAGAGAGAAGAGATaGGAAGTCAATGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: QHARDRREYLEDNMWVGTNREKR*EVNAQP
Trigger: GGGTTGGGCATTGACTTCCCATCTCTTCTCTCTGTT...AGTGCCAACCCACATGTTGTCCTCCAAATATTCCCTTCTATCCCTGGCATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCAACAGAGTTCCAAGGTaGGCACAAGCACTGAGAATA +
Preference number: 4 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGNRVPR*AQALRI
Trigger: TATTCTCAGTGCTTGTGCCCACCTTGGAACTCTGTT...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGTTCCAGGAGGAGGCGTaGACCTGCCTTCAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRFQEEA*TCLQAS
Trigger: TGAAGCTTGAAGGCAGGTCCACGCCTCCTCCTGGAA...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp GGCCATGGATATATACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGAGAGGTCAGAAGACAATaGGATGACATCTTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: GHGYIQWCTGTSLCQLTREVRRQ*DDIFKV
Trigger: TACTTTGAAGATGTCATCCCATTGTCTTCTGACCTC...TCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTAAGGACACAGAGCCATaGCCTTGTTGGATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNIKDTEP*PCWIFG
Trigger: CCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCTT...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp CCAGCAAGCACTATGGGCCTGGCTTTGCCAAAATCTAAAACAGGCCAAAGGGATATACAAAGAATTAGCTaGGCATGGTGGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PASTMGLALPKSKTGQRDIQRIS*AWWWVP
Trigger: AGGCACCCACCACCATGCCCAGCTAATTCTTTGTAT...ATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 72 bp AGACGATATTTGAGCAGAAGGCACCTGGCCAAGATCTaGGACCAGAGTATCACATGCGGAATGAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RRYLSRRHLAKI*DQSITCGMKSK
Trigger: CTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAAGATCTTGGCCAGGTGCCTTCTGCTCAAATATCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 72 bp CACTGGCACCAGCTTGTGCCAGCTGACGAGAGTCAATaGTGTGCTTCTCTTCCCAATTCTGCATCAAATTTG +
Preference number: 4 (lower is better)
Translates to: HWHQLVPADESQ*CASLPNSASNL
Trigger: CAAATTTGATGCAGAATTGGGAAGAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp GGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATAGCAGTTGTTGTGTaGAACAGATTCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: GTMSISSCHISRCLPLHNIAVVV*NRFCVY
Trigger: ATAGACGCAGAATCTGTTTCACACAACAACTGCTAT...ATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000447324.5
CDS-3UTR TCA 90 bp GTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGAGAGAGAATCCGTACACATCTGCTaGTTGGATCTCTGTTATGAG +
Preference number: 4 (lower is better)
Translates to: VRLLRDLEKSRVFLCERESVHIC*LDLCYE
Trigger: CTCATAACAGAGATCCAATCAGCAGATGTGTACGGA...TTCTCTCTCACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGGGCAGCAGTGTATGCTaGAGTGTTCGGAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: SRGCSFSLNSSLVTSSLGGSSVC*SVRSTS
Trigger: AGAAGTACTCCGAACACTTCAGCATACACTGCTGCC...CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp AGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAGATCTTGGACCATTCGTTGGCTACATCTaGCACATGGATTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: STSETIFEQKAPGQDLGPFVGYI*HMDLDN
Trigger: GTTGTCTAAATCCATGTGTCAGATGTAGCCAACGAA...TGGTCCAAGATCTTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTCACTCCACCATCAGATaGAAATGTGGAGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFHSTIR*KCGEAS
Trigger: GCTGGCCTCTCCACATTTTCATCTGATGGTGGAGTG...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CTTCAGTGGTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGCCCATAGACATTCTCTaGAAGCTAAGTTTCCCAACA +
Preference number: 4 (lower is better)
Translates to: LQWSGSSGTWRSPEYFCVPIDIL*KLSFPT
Trigger: TGTTGGGAAACTTAGCTTTCAGAGAATGTCTATGGG...CACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGGGAGCCAATAAAAGCCTGGAAGAACAATaGACCTTGTCCCCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: DSLPASFHSSIPTLGANKSLEEQ*TLSPVG
Trigger: GCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCT...TTTATTGGCTCCCAAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAGGTGGGCACAAGCACTaGGAATATATCACAACATAC +
Preference number: 4 (lower is better)
Translates to: VFKGSTSETIFEQKAPGQGGHKH*EYITTY
Trigger: GTATGTTGTGATATATTCTCAGTGCTTGTGCCCACC...TTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGAGGTCCCTGAGGGTTTaGGCCTACTTCAATGCATGC +
Preference number: 4 (lower is better)
Translates to: RGCSFSLNSSLVTSSLGLRSLRV*AYFNAC
Trigger: GCATGCATTGAAGTAGGCTCAAACCCTCAGGGACCT...CAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420739.5
CDS-3UTR TCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTCTTTGGGGTTGGCCTaGTCTTCCTTTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNISLGLA*SSFSIW
Trigger: CCAGATTGAAAAGGAAGATCAGGCCAACCCCAAAGA...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383754.7
ENST00000447324.5
ENST00000452959.6
CDS-3UTR TCA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATATGTGTGTCTTCTGGATaGTGTGGAAGAGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QITSLNFTATTPKCRRLICVSSG*CGRESP
Trigger: TGGGCTCTCTCTTCCACATCATCCAGAAGACACACA...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp AGGTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTTCAGCTCAGCCATCCTaGAACCGGCTTTACAGTGTG +
Preference number: 4 (lower is better)
Translates to: RLYNFLLCQYPQIATQRCSAQPS*NRLYSV
Trigger: CACACTGTAAAGCCGGTTTCAGGATGGCTGAGCTGA...ACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATATCTTCTCTTCTTTCTTaGCCGTCAGCTCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: QITSLNFTATTPKCRRLISSLLS*PSAQPS
Trigger: GGATGGCTGAGCTGACGGTCAAGAAAGAAGAGAAGA...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTCTGTGCAGCTGCTGCTaGAAGACTAGGAAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNILCSCC*KTRKKC
Trigger: ACACTTTTTCCTAGTCTTTCAGCAGCAGCTGCACAG...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp CCCATCATAATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAAGCCGCTCTTACAGATaGTGTATTTCCGATCCACTA +
Preference number: 4 (lower is better)
Translates to: PIIIGFRPLTSGNGLLHRSRSYR*CISDPL
Trigger: TAGTGGATCGGAAATACAGCATCTGTAAGAGCGGCT...TCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATTATGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp GTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGAGAGAGAAGCAGGTGTTTGCCCCTaGATAATATTTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VRLLRDLEKSRVFLCEREAGVCP*IIFEAR
Trigger: TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGC...TTCTCTCTCACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAATGAGCATCAGCAGTTaGCACATCAGCAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARMSISS*HISRCL
Trigger: CAAACACCTGCTGATGTGGCAACTGCTGATGCTCAT...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR GCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTATGAGCATCAGCAGTTaGCACATCAGCAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNIMSISS*HISRCL
Trigger: CAAACACCTGCTGATGTGGCAACTGCTGATGCTCAT...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR GCA 90 bp CAAAAATTAAAAGTTGAGCTCAGCAACAGCATGCCAGGGATAGAAGGGAATATTTCTAGAGCCTGCGGGTaGTGCTGGAACCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: QKLKVELSNSMPGIEGNISRACG*CWNPLT
Trigger: AGTCAGGGGGTTCCAGCAGCACCCGCAGGCTCTAGA...AATATTCCCTTCTATCCCTGGCATGCTGTTGCTGAGCTCAACTTTTAATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGGAGGAGGCGTGGACCTaGCTTCAAGCTTCAAATAGC +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIREEAWT*LQASNS
Trigger: GCTATTTGAAGCTTGAAGGCAGGTCCACGCCTCCTC...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR GCA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAGCAGTCAAATTTCCCTaGCTTTATATTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAAVKFP*LYIGIS
Trigger: AGAAATTCCAATATAAAGGCAGGGAAATTTGACTGC...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCTTGCATGAATTAATATaGACTATACTCTCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFALHELI*TILSPP
Trigger: TGGAGGTGAGAGTATAGTGCATATTAATTCATGCAA...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp TGCACTATACTCTCACCTCCACAATCATTCCATAGCAAATGTGTGTCTTCTGGAAACATAGAACGAGGCTaGAGAGCCCCGCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: CTILSPPQSFHSKCVSSGNIERG*RAPHRG
Trigger: TCCTCTGTGCGGGGCTCTGCAGCCTCGTTCTATGTT...TCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGTTGATACTGACCACTTaGTGTTTTGTGTTTATCACT +
Preference number: 4 (lower is better)
Translates to: PHAMGTMSISSCHISRCLLILTT*CFVFIT
Trigger: AGTGATAAACACAAAACAGCAAGTGGTCAGTATCAA...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGATGGTCACTTCTTCTTTaGGGTTGGCCTGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARWSLLL*GWPDLP
Trigger: AGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCA...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CCA 90 bp ATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCAGGCCTGTGCATATCCTaGAGAAGAAAGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: MASYTEREILDCLTSYNSGLCIS*RRKDCR
Trigger: CCTGCAGTCCTTTCTTCTCCAGGATATGCACAGGCC...TGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGGAGACATCTGACATAATTCGTTaGCTACATCTGACACATGGA +
Preference number: 4 (lower is better)
Translates to: PQLGQEEMFKKPHVRLETSDIIR*LHLTHG
Trigger: TCCATGTGTCAGATGTAGCCAACGAATTATGTCAGA...TGTCTCCAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp TTGGACCAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGTCCTTGGCCGGTTTCTaGCTCATCTCACTGTATTTT +
Preference number: 4 (lower is better)
Translates to: LDQSITCGMKSKNRVPRWSLAGF*LISLYF
Trigger: AAAATACAGTGAGATGAGTCAGAAACCGGCCAAGGA...CCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGGGCAGCAGTGTATGCTaGAGTGTTCGGAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRGSSVC*SVRSTS
Trigger: AGAAGTACTCCGAACACTTCAGCATACACTGCTGCC...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR TCA 90 bp ACCTCACCATGTTATTCCCAGGAATGTAATGGCCTCAGATATCCCATCATTGGAGGCAGCAGTGTATGCTaGAGTGTTCGGAGTACTTCT +
Preference number: 4 (lower is better)
Translates to: TSPCYSQECNGLRYPIIGGSSVC*SVRSTS
Trigger: AGAAGTACTCCGAACACTTCAGCATACACTGCTGCC...TCCAATGATGGGATATCTGAGGCCATTACATTCCTGGGAATAACATGGTGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCATAATATGCCATGGGGACCATaGGCATCAGCAGTTGCCACA +
Preference number: 4 (lower is better)
Translates to: YNFLLCQYPQIATQRCHNMPWGP*ASAVAT
Trigger: TGTGGCAACTGCTGATGCTCATGGTCCCCATGGCAT...ATTATGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
CDS-3UTR TCA 90 bp ATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCAATAGTTCAGATGGGCTaGGCAAGGCTCAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: MASYTEREILDCLTSYNSIVQMG*ARLKGS
Trigger: ACTGCCTTTGAGCCTTGCTCAGCCCATCTGAACTAT...TGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CCCCTTTCCACACTTAACTCTCTTCTCCCCCAAGGCAAAGCTCCTGTCCTATTTCCCATAGACATTCTCTaGAAGCTAAGTTTCCCAACA +
Preference number: 4 (lower is better)
Translates to: PLSTLNSLLPQGKAPVLFPIDIL*KLSFPT
Trigger: TGTTGGGAAACTTAGCTTTCAGAGAATGTCTATGGG...AAATAGGACAGGAGCTTTGCCTTGGGGGAGAAGAGAGTTAAGTGTGGAAAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGCATACAGTCATCTCATaGTCAGCTTCAGTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SRGCSFSLNSSLVTSSLGHTVIS*SASVVR
Trigger: CCTGACCACTGAAGCTGATCATGAGATGACTGTATG...CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR TCA 90 bp TTTCCACACTTAACTCTCTTCTCCCCCAAGGCAAAGCTCCTGTCCTATTTTTCCCATACAGTCATCTCATaGTCAGCTTCAGTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FPHLTLFSPKAKLLSYFSHTVIS*SASVVR
Trigger: CCTGACCACTGAAGCTGATCATGAGATGACTGTATG...GGAAAAATAGGACAGGAGCTTTGCCTTGGGGGAGAAGAGAGTTAAGTGTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCTCTATACCAGGTCCCTaGGGGTTTGAGCCTACTTCA +
Preference number: 4 (lower is better)
Translates to: RLFIQFKLLLGHFFFGVGSIPGP*GFEPTS
Trigger: TGAAGTAGGCTCAAACCCTCAGGGACCTGGTATAGA...GCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420739.5
CDS-3UTR GCA 90 bp TTGGACCAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGAGCCGCTCTTACAGATaGTGTATTTCCGATCCACTA +
Preference number: 4 (lower is better)
Translates to: LDQSITCGMKSKNRVPRWSRSYR*CISDPL
Trigger: TAGTGGATCGGAAATACAGCATCTGTAAGAGCGGCT...CCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCGCAGGTGTTTGCCCCTaGATAATATTTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVAGVCP*IIFEAR
Trigger: TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGC...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR GCA 90 bp AAGATCAAAGTCCTCCATAAGAGTTTTGGGCTACAGATAGTGGGAGAAAAACAGTCCAAAAGGGGCTCCTaGAAGGCCGTTGCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: KIKVLHKSFGLQIVGEKQSKRGS*KAVAED
Trigger: ATCCTCAGCAACGGCCTTGCAGGAGCCCCTTTTGGA...CTGTTTTTCTCCCACTATCTGTAGCCCAAAACTCTTATGGAGGACTTTGATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp AGAGTGAACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCAGAAGGATTCATTGCCTaGATCTTTTCACTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: RVNQAWKNNEPCPLWARAEGFIA*IFSLFN
Trigger: ATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTC...TGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp GGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATGTGATTTACAAACAATaGTTAAGGTCATCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: GTMSISSCHISRCLPLHNVIYKQ*LRSSLA
Trigger: TGCTAGGGATGACCTTAAGCATTGTTTGTAAATCAC...ATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp TCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCAACACAACATAACTTaGAATAGTGCCCACACACTA +
Preference number: 4 (lower is better)
Translates to: SEDNGMTSSKYSRQAALRQHNIT*NSAHTL
Trigger: TAGTGTGTGGGCACTATTGCAAGTTATGTTGTGTTG...CCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCTGTTCGGAGTACTTCTaGTTTTTGGAGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVCSEYF*FLESLG
Trigger: TCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACA...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp CCTTCCACTGGCCTCCTAAGTAGAAAAGCGCTGGAAAGGTTGGGGAGGAGTGTGATTTCTTTGCATCTCTaGATCATATGGAAGCCTAAT +
Preference number: 4 (lower is better)
Translates to: PSTGLLSRKALERLGRSVISLHL*IIWKPN
Trigger: ATTAGGCTTCCATATGATCCAGAGATGCAAAGAAAT...CACACTCCTCCCCAACCTTTCCAGCGCTTTTCTACTTAGGAGGCCAGTGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCTTCAATCCCGACTTTaGGAGCCAATAAACAATGTA +
Preference number: 4 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGLQSRL*EPINNV
Trigger: TACATTGTTTATTGGCTCCCAAAGTCGGGATTGAAG...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCCAAAGAGTGAACCAAGCCTaGAAGAACAATGAACCTTGT +
Preference number: 4 (lower is better)
Translates to: VFKGSTSETIFEQKAPGQRVNQA*KNNEPC
Trigger: ACAAGGTTCATTGTTCTTCCAGGCTTGGTTCACTCT...TTGGCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCACCCCTTTCCACACTTTCTTCCTTTTCAATCTaGTCTTCTGGCAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: EREILDCLTSYNSPLSTLSSFSI*SSGRRS
Trigger: GCTGCGCCTGCCAGAAGACCAGATTGAAAAGGAAGA...AAGTGTGGAAAGGGGTGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383754.7
CDS-3UTR CCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAAGAAACTTGAGTCCGTaGAAGGATAAGCAGACTGAC +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARRNLSP*KDKQTD
Trigger: GTCAGTCTGCTTATCCTTCCACGGACTCAAGTTTCT...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
CDS-3UTR CCA 90 bp GTGGCAATTATAGAGGTCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGAGCCATGGCCTTGTTaGATCTTTGGGCATCCGACT +
Preference number: 4 (lower is better)
Translates to: VAIIEVRRQWDDIFKVLQEPWPC*IFGHPT
Trigger: AGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTC...CTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp CCCATCATAATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAATAGCAGTTGTTGTGTaGAACAGATTCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: PIIIGFRPLTSGNGLLHRIAVVV*NRFCVY
Trigger: ATAGACGCAGAATCTGTTTCACACAACAACTGCTAT...TCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATTATGATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATATCCTTGGCCGGTTTCTaGCTCATCTCACTGTATTTT +
Preference number: 4 (lower is better)
Translates to: QITSLNFTATTPKCRRLISLAGF*LISLYF
Trigger: AAAATACAGTGAGATGAGTCAGAAACCGGCCAAGGA...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TTTCCACACTTAACTCTCTTCTCCCCCAAGGCAAAGCTCCTGTCCTATTTTTCCTCTTTGGGGTTGGCCTaGTCTTCCTTTTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: FPHLTLFSPKAKLLSYFSSLGLA*SSFSIR
Trigger: TCTGATTGAAAAGGAAGATCAGGCCAACCCCAAAGA...GGAAAAATAGGACAGGAGCTTTGCCTTGGGGGAGAAGAGAGTTAAGTGTGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR TCA 90 bp CAAAAATTAAAAGTTGAGCTCAGCAACAGCATGCCAGGGATAGAAGGGAATATTAGCCAATTATGGCTCTaGCTATGGGCTGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: QKLKVELSNSMPGIEGNISQLWL*LWAGTG
Trigger: CCCTGTGCCAGCCCATAGTCAGAGCCATAATTGGCT...AATATTCCCTTCTATCCCTGGCATGCTGTTGCTGAGCTCAACTTTTAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GAGCCAATAAACAATGTAGCTAAGTTTGGGCCCAAAACAAGCCAGGAAGACTCCCTGTCCTATTTTTCCTaGTCTCACTCCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: EPINNVAKFGPKTSQEDSLSYFS*SHSTIR
Trigger: TCTGATGGTGGAGTGAGATCAGGAAAAATAGGACAG...GGAGTCTTCCTGGCTTGTTTTGGGCCCAAACTTAGCTACATTGTTTATTGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp TTTCCACACTTAACTCTCTTCTCCCCCAAGGCAAAGCTCCTGTCCTATTTTTCCGAATCAAAAGCAGAGTaGACCAAGCCTGGAAGAACA +
Preference number: 4 (lower is better)
Translates to: FPHLTLFSPKAKLLSYFSESKAE*TKPGRT
Trigger: TGTTCTTCCAGGCTTGGTTCACTCTGCTTTTGATTC...GGAAAAATAGGACAGGAGCTTTGCCTTGGGGGAGAAGAGAGTTAAGTGTGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGACAGAAGACAATGGGATaGCATCTTCAAAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARQKTMG*HLQSTP
Trigger: TGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTG...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
CDS-3UTR TCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTCATGTATCTTCAGATTaGAGAAACTTGAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNIHVSSD*RNLSPW
Trigger: CCACGGACTCAAGTTTCTTCAATCTGAAGATACATG...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
CDS-3UTR TCA 90 bp CCAGCAAGCACTATGGGCCTGGCTTTGCCAAAATCTAAAACAGGCCAAAGGGATGCCCAGATCCAAAACTaGACCCAAACAAGTATTTTT +
Preference number: 4 (lower is better)
Translates to: PASTMGLALPKSKTGQRDAQIQN*TQTSIF
Trigger: AAAAATACTTGTTTGGGTTCAGTTTTGGATCTGGGC...ATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TTCTACCTGAAGACTCCATGCAGTCAAATTTCCCTGCCTTTATATTGGAATTTCGGCAGGAGAATGGCTTaGACCCGGGAGGTGAAGATT +
Preference number: 4 (lower is better)
Translates to: FYLKTPCSQISLPLYWNFGRRMA*TREVKI
Trigger: AATCTTCACCTCCCGGGTTCAAGCCATTCTCCTGCC...GAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp GAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGAGCCGCTCTTACAGATaGTGTATTTCCGATCCACTA +
Preference number: 4 (lower is better)
Translates to: EPRLFIQFKLLLGHFFFGSRSYR*CISDPL
Trigger: TAGTGGATCGGAAATACAGCATCTGTAAGAGCGGCT...CCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR GCA 90 bp AGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCATGAGCATCAGCAGTTaGCACATCAGCAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: RLFIQFKLLLGHFFFGVGMSISS*HISRCL
Trigger: CAAACACCTGCTGATGTGGCAACTGCTGATGCTCAT...GCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR GCA 90 bp CACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGGCACAAGCACTGAGAGAGAAATCTTGGACTaGTTAACCTCCTATAACTCA +
Preference number: 4 (lower is better)
Translates to: HMRNEEQEQSSKVGTSTEREILD*LTSYNS
Trigger: TGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCT...CTCAGTGCTTGTGCCCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp TCCACAGGAGCACAAGGTGATCTAAGGATCCTCAACTTGACCCAGGGGAAAACTTACACATCTGCTGATTaGATCTCTGTTATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: STGAQGDLRILNLTQGKTYTSAD*ISVMSL
Trigger: CAAGCTCATAACAGAGATCCAATCAGCAGATGTGTA...AGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCACCCCTTTCCACACTTTGGTCACTTCTTCTTTaGGGTTGGCCTGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: EREILDCLTSYNSPLSTLWSLLL*GWPDLP
Trigger: AGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCA...AAGTGTGGAAAGGGGTGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp CCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTTGGTCACTTCTTCTTTaGGGTTGGCCTGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: PRLFIQFKLLLGHFFFGVWSLLL*GWPDLP
Trigger: AGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCA...AACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp TGCACTATACTCTCACCTCCACAATCATTCCATAGCAAATGTGTGTCTTCTGGATCTTCCTTTTCAATCTaGTCTTCTGGCAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: CTILSPPQSFHSKCVSSGSSFSI*SSGRRS
Trigger: GCTGCGCCTGCCAGAAGACCAGATTGAAAAGGAAGA...TCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAGAGCTGTATCTCATCTaGATCTATCACTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARELYLI*IYHSSF
Trigger: GAAGGAAGAGTGATAGATCCAGATGAGATACAGCTC...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp TCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGTCTTCCAACAGGCAGTaGTTTCTCTTTTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SEDNGMTSSKYSRQAALRSSNRQ*FLFSEN
Trigger: ATTTTCTGAAAAGAGAAACCACTGCCTGTTGGAAGA...CCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTTCCTTGGCCGGTTTCTaGCTCATCTCACTGTATTTT +
Preference number: 4 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFSLAGF*LISLYF
Trigger: AAAATACAGTGAGATGAGTCAGAAACCGGCCAAGGA...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp TTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGTCCTTGGCCGGTTTCTaGCTCATCTCACTGTATTTT +
Preference number: 4 (lower is better)
Translates to: LFIQFKLLLGHFFFGVGLSLAGF*LISLYF
Trigger: AAAATACAGTGAGATGAGTCAGAAACCGGCCAAGGA...CAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000420739.5
CDS-3UTR TCA 90 bp AGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCTCTTTGGGGTTGGCCTaGTCTTCCTTTTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: RLFIQFKLLLGHFFFGVGSLGLA*SSFSIR
Trigger: TCTGATTGAAAAGGAAGATCAGGCCAACCCCAAAGA...GCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000442631.5
CDS-3UTR TCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGATTTTCTCTCTGCTTCTaGCATAATTCGTTGGCTACA +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARFSLCF*HNSLAT
Trigger: TGTAGCCAACGAATTATGTCAGAAGCAGAGAGAAAA...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp AACAGAGAGAAGAGATGGGAAGTCAATGCCCAACCCTGTCCCATCATAATTGGGTTTTCTCTCTGCTTCTaGCATAATTCGTTGGCTACA +
Preference number: 4 (lower is better)
Translates to: NREKRWEVNAQPCPIIIGFSLCF*HNSLAT
Trigger: TGTAGCCAACGAATTATGTCAGAAGCAGAGAGAAAA...CCCAATTATGATGGGACAGGGTTGGGCATTGACTTCCCATCTCTTCTCTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCACCCCTTTCCACACTTCTGTCCTATTTTTCCTaGTCTCACTCCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: EREILDCLTSYNSPLSTLLSYFS*SHSTIR
Trigger: TCTGATGGTGGAGTGAGATCAGGAAAAATAGGACAG...AAGTGTGGAAAGGGGTGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGAGCCGCTCTTACAGATaGTGTATTTCCGATCCACTA +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRSRSYR*CISDPL
Trigger: TAGTGGATCGGAAATACAGCATCTGTAAGAGCGGCT...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR GCA 90 bp AACTATGGAAACAGCACCGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGGCAGGTGTTTGCCCCTaGATAATATTTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: NYGNSTEFSREAPLRRYLAGVCP*IIFEAR
Trigger: TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGC...CAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCGGTGCTGTTTCCATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp GTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCAGCAGGTGTTTGCCCCTaGATAATATTTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VVQFSALPVSPDCNPKVSAGVCP*IIFEAR
Trigger: TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGC...TGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
CDS-3UTR GCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTACATCAGCAGGTGTTTaGCCCTGCATAATATTTGAA +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNITSAGV*PCIIFE
Trigger: TTCAAATATTATGCAGGGGCAAACACCTGCTGATGT...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR GCA 90 bp GAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGCCTACTTCAATGCATaGAGAATATATAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EPRLFIQFKLLLGHFFFGAYFNA*RIYRER
Trigger: CCTCTCCCTATATATTCTGCATGCATTGAAGTAGGC...CCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420739.5
CDS-3UTR CCA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTACACATCTGCTGATTaGATCTCTGTTATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TMSISSCHISRCLPLHNIYTSAD*ISVMSL
Trigger: CAAGCTCATAACAGAGATCCAATCAGCAGATGTGTA...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000452959.6
CDS-3UTR CCA 90 bp AACTATGGAAACAGCACCGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGTGTTCGGAGTACTTCTaGTTTTTGGAGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: NYGNSTEFSREAPLRRYLCSEYF*FLESLG
Trigger: TCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACA...CAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCGGTGCTGTTTCCATAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGTGTTCGGAGTACTTCTaGTTTTTGGAGAGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRCSEYF*FLESLG
Trigger: TCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACA...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGATCTGACATAATTCGTTaGCTACATCTGACACATGGA +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARSDIIR*LHLTHG
Trigger: TCCATGTGTCAGATGTAGCCAACGAATTATGTCAGA...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp AACTATGGAAACAGCACCGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAACAGAGTTCCAAGGTaGGCACAAGCACTGAGAATA +
Preference number: 4 (lower is better)
Translates to: NYGNSTEFSREAPLRRYLNRVPR*AQALRI
Trigger: TATTCTCAGTGCTTGTGCCCACCTTGGAACTCTGTT...CAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCGGTGCTGTTTCCATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACAAAAGGGAAGAGATaGTGTTACCAGAACCTAGAA +
Preference number: 4 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVTKGKR*CYQNLE
Trigger: TTCTAGGTTCTGGTAACACCATCTCTTCCCTTTTGT...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420739.5
ENST00000424090.5
CDS-3UTR CCA 90 bp CGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGAGAAACTTGAGTCCGTaGAAGGATAAGCAGACTGAC +
Preference number: 4 (lower is better)
Translates to: RGCSFSLNSSLVTSSLGLRNLSP*KDKQTD
Trigger: GTCAGTCTGCTTATCCTTCCACGGACTCAAGTTTCT...CAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp CCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTAGAAACTTGAGTCCGTaGAAGGATAAGCAGACTGAC +
Preference number: 4 (lower is better)
Translates to: PRLFIQFKLLLGHFFFGVRNLSP*KDKQTD
Trigger: GTCAGTCTGCTTATCCTTCCACGGACTCAAGTTTCT...AACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGGCTGATTACACAGGTTaGGTAATAAGGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRADYTG*VIRLKR
Trigger: CCTCTTCAGCCTTATTACCCAACCTGTGTAATCAGC...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp ACCCCCAGGCTTTTCAACTATCTTTCACCTATCTCTTCAAACAAATATGTCCACTGGTGTGGGTTGGGCTaGGCCAGTAATTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TPRLFNYLSPISSNKYVHWCGLG*ASNLFS
Trigger: TGAGAACAAATTACTGGCCCAGCCCAACCCACACCA...GTGGACATATTTGTTTGAAGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp GTGGCAATTATAGAGGTCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGCTTCACAGAGGGCCATaGATATATACAGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VAIIEVRRQWDDIFKVLQLHRGP*IYTVVH
Trigger: GTGCACCACTGTATATATCCATGGCCCTCTGTGAAG...CTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 72 bp GAAGACTCCATGCAGTCAAATTTCCCTGCCTTTATATaGGAATTTCTACAGAGACCCATGGTCTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: EDSMQSNFPAFI*EFLQRPMVSPS
Trigger: ACTTGGGGAGACCATGGGTCTCTGTAGAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 72 bp TTTCTTATTTGGTGTGGGTTGGGCTGGGCCAGTAATTaGTTCTCACTTACAGTGGTCTGTCGTATGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FLIWCGLGWASN*FSLTVVCRMFH
Trigger: GTGAAACATACGACAGACCACTGTAAGTGAGAACAAATTACTGGCCCAGCCCAACCCACACCAAATAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp CGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGTCTTTGGGGTTGGCCTaGTCTTCCTTTTCAATCTTA +
Preference number: 4 (lower is better)
Translates to: RGCSFSLNSSLVTSSLGLSLGLA*SSFSIL
Trigger: TAAGATTGAAAAGGAAGATCAGGCCAACCCCAAAGA...CAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420739.5
ENST00000424090.5
CDS-3UTR TCA 90 bp CGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGCAGAAGACAATGGGATaGCATCTTCAAAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: RGCSFSLNSSLVTSSLGLQKTMG*HLQSTP
Trigger: TGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTG...CAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp AGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCATGTATCTTCAGATTaGAGAAACTTGAGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: RLFIQFKLLLGHFFFGVGHVSSD*RNLSPW
Trigger: CCACGGACTCAAGTTTCTTCAATCTGAAGATACATG...GCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000442631.5
CDS-3UTR TCA 90 bp CAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGATCTTCCTTCTCATCAGTAGCTTATaGGAATTTTCCCCACATCTT +
Preference number: 4 (lower is better)
Translates to: QFKLLLGHFFFGVGLIFLLISSL*EFSPHL
Trigger: AAGATGTGGGGAAAATTCTCATAAGCTACTGATGAG...AAGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424090.5
CDS-3UTR GCA 90 bp AGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGACATCAGCAGGTGTTTaGCCCTGCATAATATTTGAA +
Preference number: 4 (lower is better)
Translates to: SRGCSFSLNSSLVTSSLGTSAGV*PCIIFE
Trigger: TTCAAATATTATGCAGGGGCAAACACCTGCTGATGT...CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR GCA 90 bp CAAAAATTAAAAGTTGAGCTCAGCAACAGCATGCCAGGGATAGAAGGGAATATTGGAGTGGGAGAGAGCTaGTTTTCAGGCCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QKLKVELSNSMPGIEGNIGVGES*FSGLFS
Trigger: AGAGAAAAGGCCTGAAAAGCAGCTCTCTCCCACTCC...AATATTCCCTTCTATCCCTGGCATGCTGTTGCTGAGCTCAACTTTTAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAAGAGAAATCTTGGACTaGTTAACCTCCTATAACTCA +
Preference number: 4 (lower is better)
Translates to: SAVATSAGVCPCIIFEARREILD*LTSYNS
Trigger: TGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCT...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGCCTACTTCAATGCATaGAGAATATATAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFAYFNA*RIYRER
Trigger: CCTCTCCCTATATATTCTGCATGCATTGAAGTAGGC...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383754.7
CDS-3UTR GCA 90 bp GTGGCAATTATAGAGGTCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGTACCTGAAGACTCCATaGAGTCAAATTTCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VAIIEVRRQWDDIFKVLQYLKTP*SQISLP
Trigger: AGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTA...CTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp GTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCAGCCCTAATGAAACCCTaGTTTCTCTCAACATCTAGA +
Preference number: 4 (lower is better)
Translates to: VVQFSALPVSPDCNPKVSALMKP*FLSTSR
Trigger: TCTAGATGTTGAGAGAAAGCAGGGTTTCATTAGGGC...TGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp GAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGTACACATCTGCTGATTaGATCTCTGTTATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: EPRLFIQFKLLLGHFFFGYTSAD*ISVMSL
Trigger: CAAGCTCATAACAGAGATCCAATCAGCAGATGTGTA...CCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000420739.5
CDS-3UTR CCA 90 bp CCCCTCACATCAGGAAATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTATTTCTTTGCATCTCTaGATCATATGGAAGCCTAAT +
Preference number: 4 (lower is better)
Translates to: PLTSGNGLLHRERNLGLLISLHL*IIWKPN
Trigger: ATTAGGCTTCCATATGATCCAGAGATGCAAAGAAAT...AAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp GAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGACAAAAGGGAAGAGATaGTGTTACCAGAACCTAGAA +
Preference number: 4 (lower is better)
Translates to: EPRLFIQFKLLLGHFFFGTKGKR*CYQNLE
Trigger: TTCTAGGTTCTGGTAACACCATCTCTTCCCTTTTGT...CCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420739.5
ENST00000424090.5
CDS-3UTR CCA 90 bp GTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCAAAGTGTGAGACCTTATaGCTTCTGCTTATTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VVQFSALPVSPDCNPKVSKCETL*LLLIGQ
Trigger: TTGCCCAATAAGCAGAAGCCATAAGGTCTCACACTT...TGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp TTCCTACCTATTACTAAACAAAGGTTTGGGTGGAAGGACGTATTTCAACTCTTCTTCTACAGAGACCCATaGTCTCCCCAAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLPITKQRFGWKDVFQLFFYRDP*SPQVRK
Trigger: CTTCCTCACTTGGGGAGACCATGGGTCTCTGTAGAA...GAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 72 bp AAACCGGCTTTACAGTGTGCAGATCCCATCAATTCTTaGGTCAGCTTCATGTTAGCACCAATATCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: KPALQCADPINS*VSFMLAPISER
Trigger: CCTTTCAGATATTGGTGCTAACATGAAGCTGACCAAAGAATTGATGGGATCTGCACACTGTAAAGCCGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp AGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCATAGCAGTTGTTGTGTaGAACAGATTCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: RLFIQFKLLLGHFFFGVGIAVVV*NRFCVY
Trigger: ATAGACGCAGAATCTGTTTCACACAACAACTGCTAT...GCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000420739.5
CDS-3UTR TCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGATAGCAGTTGTTGTGTaGAACAGATTCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRIAVVV*NRFCVY
Trigger: ATAGACGCAGAATCTGTTTCACACAACAACTGCTAT...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR TCA 90 bp CGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGTCAAAAATTAAAAGTTaGGCTCAGCAACAGCATGCC +
Preference number: 4 (lower is better)
Translates to: RGCSFSLNSSLVTSSLGLSKIKS*AQQQHA
Trigger: GGCATGCTGTTGCTGAGCTCAACTTTTAATTTTTGA...CAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR GCA 90 bp TACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCATAATAGCCGCTCTTACAGATaGTGTATTTCCGATCCACTA +
Preference number: 4 (lower is better)
Translates to: YNFLLCQYPQIATQRCHNSRSYR*CISDPL
Trigger: TAGTGGATCGGAAATACAGCATCTGTAAGAGCGGCT...ATTATGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
CDS-3UTR CCA 90 bp GAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGCATCTCTGGATCATATaGAAGCCTAATATCTTACTC +
Preference number: 4 (lower is better)
Translates to: EPRLFIQFKLLLGHFFFGHLWII*KPNILL
Trigger: GAGTAAGATATTAGGCTTCCATATGATCCAGAGATG...CCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CCA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGACAAAAGGGAAGAGATaGTGTTACCAGAACCTAGAA +
Preference number: 4 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRTKGKR*CYQNLE
Trigger: TTCTAGGTTCTGGTAACACCATCTCTTCCCTTTTGT...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CCA 90 bp TGCACTATACTCTCACCTCCACAATCATTCCATAGCAAATGTGTGTCTTCTGGACAAGCACTATGGGCCTaGCTTTGCCAAAATCTAAAA +
Preference number: 4 (lower is better)
Translates to: CTILSPPQSFHSKCVSSGQALWA*LCQNLK
Trigger: TTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTG...TCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp AAGATCAAAGTCCTCCATAAGAGTTTTGGGCTACAGATAGTGGGAGAAAAACAGTTCGTTGGCTACATCTaGCACATGGATTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: KIKVLHKSFGLQIVGEKQFVGYI*HMDLDN
Trigger: GTTGTCTAAATCCATGTGTCAGATGTAGCCAACGAA...CTGTTTTTCTCCCACTATCTGTAGCCCAAAACTCTTATGGAGGACTTTGATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR TCA 90 bp GATTCACTCATTCTATTGGTGGACATTTTGGTAATTTCTCATGATCTCTCTCCTTCTTTGGGGTTGGCCTaGTCTTCCTTTTCAATCTGG +
Preference number: 4 (lower is better)
Translates to: DSLILLVDILVISHDLSPSLGLA*SSFSIW
Trigger: CCAGATTGAAAAGGAAGATCAGGCCAACCCCAAAGA...AGGAGAGAGATCATGAGAAATTACCAAAATGTCCACCAATAGAATGAGTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TTCCTACCTATTACTAAACAAAGGTTTGGGTGGAAGGACGTATTTCAACTCTTCTGTGATAATGTCCTGTaGCACTCCCTTCTGACTGTT +
Preference number: 4 (lower is better)
Translates to: FLPITKQRFGWKDVFQLFCDNVL*HSLLTV
Trigger: AACAGTCAGAAGGGAGTGTCACAGGACATTATCACA...GAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp GATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTGGGAGCCAATAAAACATCAGCAGGTGTTTaGCCCTGCATAATATTTGAA +
Preference number: 4 (lower is better)
Translates to: DSLPASFHSSIPTLGANKTSAGV*PCIIFE
Trigger: TTCAAATATTATGCAGGGGCAAACACCTGCTGATGT...TTTATTGGCTCCCAAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR GCA 90 bp ACCCCCAGGCTTTTCAACTATCTTTCACCTATCTCTTCAAACAAATATGTCCACAAGTCTAAATTTCACTaGCACCACCCCAAAATGCAG +
Preference number: 4 (lower is better)
Translates to: TPRLFNYLSPISSNKYVHKSKFH*HHPKMQ
Trigger: CTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTT...GTGGACATATTTGTTTGAAGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp TGCACTATACTCTCACCTCCACAATCATTCCATAGCAAATGTGTGTCTTCTGGACTCTTTTCAGAAAATTaGTTTAGAAGCCACAGGCAC +
Preference number: 4 (lower is better)
Translates to: CTILSPPQSFHSKCVSSGLFSEN*FRSHRH
Trigger: GTGCCTGTGGCTTCTAAAGCAATTTTCTGAAAAGAG...TCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp TTCTACCTGAAGACTCCATGCAGTCAAATTTCCCTGCCTTTATATTGGAATTTCCCTTTTTGCATCCTATaGACTTGTGACTCTCCGATG +
Preference number: 4 (lower is better)
Translates to: FYLKTPCSQISLPLYWNFPFCIL*TCDSPM
Trigger: CATCGGAGAGTCACAAGTCCATAGGATGCAAAAAGG...GAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TGCACTATACTCTCACCTCCACAATCATTCCATAGCAAATGTGTGTCTTCTGGATCAGAACACTCAGTATaGTACATAGATACGCTGTTT +
Preference number: 4 (lower is better)
Translates to: CTILSPPQSFHSKCVSSGSEHSV*YIDTLF
Trigger: AAACAGCGTATCTATGTATCATACTGAGTGTTCTGA...TCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp TATACCACAGGTGATTCACTCATTCTATTGGTGGACATTTTGGTAATTTCTCATATGAGCATCAGCAGTTaGCACATCAGCAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: YTTGDSLILLVDILVISHMSISS*HISRCL
Trigger: CAAACACCTGCTGATGTGGCAACTGCTGATGCTCAT...ATGAGAAATTACCAAAATGTCCACCAATAGAATGAGTGAATCACCTGTGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
CDS-3UTR GCA 90 bp GTTGGCAATCATGGAGTTTACGTTAGGAGGGGAAAAGAGCCAAGCATTAAACAAGAAGGATTCATTGCCTaGATCTTTTCACTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: VGNHGVYVRRGKEPSIKQEGFIA*IFSLFN
Trigger: ATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTC...TTGTTTAATGCTTGGCTCTTTTCCCCTCCTAACGTAAACTCCATGATTGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CCA 90 bp ACCCCCAGGCTTTTCAACTATCTTTCACCTATCTCTTCAAACAAATATGTCCACTACACATCTGCTGATTaGATCTCTGTTATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TPRLFNYLSPISSNKYVHYTSAD*ISVMSL
Trigger: CAAGCTCATAACAGAGATCCAATCAGCAGATGTGTA...GTGGACATATTTGTTTGAAGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp ATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGATCTTCTCAACAAGTGTTTATTaGTTCTTACTAGTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: IQFKLLLGHFFFGVGLIFSTSVY*FLLVSG
Trigger: TCCTGACACTAGTAAGAACCAATAAACACTTGTTGA...GAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CCA 90 bp ACCCCCAGGCTTTTCAACTATCTTTCACCTATCTCTTCAAACAAATATGTCCACAAACAAAGGTTTGGGTaGAAGGACGTATTTCAACTC +
Preference number: 4 (lower is better)
Translates to: TPRLFNYLSPISSNKYVHKQRFG*KDVFQL
Trigger: GAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTT...GTGGACATATTTGTTTGAAGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR GCA 90 bp TATACCACAGGTGATTCACTCATTCTATTGGTGGACATTTTGGTAATTTCTCATGCAGGTGTTTGCCCCTaGATAATATTTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: YTTGDSLILLVDILVISHAGVCP*IIFEAR
Trigger: TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGC...ATGAGAAATTACCAAAATGTCCACCAATAGAATGAGTGAATCACCTGTGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
CDS-3UTR GCA 90 bp TTCCTACCTATTACTAAACAAAGGTTTGGGTGGAAGGACGTATTTCAACTCTTCACATCAGCAGGTGTTTaGCCCTGCATAATATTTGAA +
Preference number: 4 (lower is better)
Translates to: FLPITKQRFGWKDVFQLFTSAGV*PCIIFE
Trigger: TTCAAATATTATGCAGGGGCAAACACCTGCTGATGT...GAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp TGCACTATACTCTCACCTCCACAATCATTCCATAGCAAATGTGTGTCTTCTGGAAAGGAATCTGCATTGTaGAAATATTTACACCATGGA +
Preference number: 4 (lower is better)
Translates to: CTILSPPQSFHSKCVSSGKESAL*KYLHHG
Trigger: TCCATGGTGTAAATATTTCCACAATGCAGATTCCTT...TCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CCA 90 bp GTGGCAATTATAGAGGTCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGCTTACAGACATCAACTaGCATTATTTTGACCTGTTT +
Preference number: 4 (lower is better)
Translates to: VAIIEVRRQWDDIFKVLQLTDIN*HYFDLF
Trigger: AAACAGGTCAAAATAATGCCAGTTGATGTCTGTAAG...CTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 72 bp GGATTTAGACAACTCCTACACTCTCTAGGGATTTCTTaGCATCTCTGGATCATATGGAAGCCTAATATCTTA +
Preference number: 4 (lower is better)
Translates to: GFRQLLHSLGIS*HLWIIWKPNIL
Trigger: TAAGATATTAGGCTTCCATATGATCCAGAGATGCAAAGAAATCCCTAGAGAGTGTAGGAGTTGTCTAAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
3UTR CAA 72 bp TCTTCTTCATTTTCCTACCTATTACTAAACAAAGGTTaGGGTGGAAGGACGTATTTCAACTCTTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: SSSFSYLLLNKG*GGRTYFNSSPF
Trigger: AAATGGGGAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAAAATGAAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR TCA 90 bp TATACCACAGGTGATTCACTCATTCTATTGGTGGACATTTTGGTAATTTCTCATCTCATCAGTAGCTTATaGGAATTTTCCCCACATCTT +
Preference number: 4 (lower is better)
Translates to: YTTGDSLILLVDILVISHLISSL*EFSPHL
Trigger: AAGATGTGGGGAAAATTCTCATAAGCTACTGATGAG...ATGAGAAATTACCAAAATGTCCACCAATAGAATGAGTGAATCACCTGTGGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
CDS-3UTR GCA 90 bp TTCCTACCTATTACTAAACAAAGGTTTGGGTGGAAGGACGTATTTCAACTCTTCAGGAAGGAAGGAATCTaGATTGTGGAAATATTTACA +
Preference number: 4 (lower is better)
Translates to: FLPITKQRFGWKDVFQLFRKEGI*IVEIFT
Trigger: TGTAAATATTTCCACAATGCAGATTCCTTCCTTCCT...GAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
3UTR CAA 72 bp GGTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATaGCAACCCAAAGGTGTCATAATAATTTATAAATTC +
Preference number: 4 (lower is better)
Translates to: GCTIFCFASIPR*QPKGVIIIYKF
Trigger: GAATTTATAAATTATTATGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
CDS GCA 90 bp GAGGGCCAAAAGAAGCTGGAGGCGGGAGCCAGGGCTCTCCTCTGCTaGTTAAGCGACGCTGGCAGGAGCTGGTCTTCTGGCAGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: EGQKKLEAGARALLC*LSDAGRSWSSGRRS
Trigger: GCTGCGCCTGCCAGAAGACCAGCTCCTGCCAGCGTCGCTTAAGCAGCAGAGGAGAGCCCTGGCTCCCGCCTCCAGCTTCTTTTGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CAA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTCCTGAGGTCCAGAGGTaGAGACCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: GPHAMGTMSISSCHISRCPEVQR*RPAWPT
Trigger: TGTTGGCCAGGCTGGTCTCAACCTCTGGACCTCAGG...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAGGCATCCGACTGTGCTaGGCCACACCAGCTCCTAGC +
Preference number: 5 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAGIRLC*ATPAPS
Trigger: GCTAGGAGCTGGTGTGGCCAAGCACAGTCGGATGCC...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCATGTGGGTTGGCACTaGAGCCACCCTGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAHVGWH*SHPDPE
Trigger: CTCAGGGTCAGGGTGGCTCAAGTGCCAACCCACATG...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS GCA 90 bp AACTTGATGGTAGTAAACTCCAGGCAGGCTGCCCTGAGGCCCCCATaGCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: NLMVVNSRQAALRPP*HGDHEHQQLPHQQV
Trigger: CACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTTTACTACCATCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479860.1
CDS-3UTR CAA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCAATCTCCTTCTTGGAATaGAGGAAGGTGAACGGCGGG +
Preference number: 5 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPISFLE*RKVNGG
Trigger: CCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGAT...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424090.5
ENST00000442631.5
ENST00000452959.6
CDS-3UTR CAA 90 bp GCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCCCAGCTGGGCCAGGTCCAGGAGCCGAGGTaGTTCATTCAGTTTAAACTC +
Preference number: 5 (lower is better)
Translates to: ARLKGSAFEDLLSPQLGQVQEPR*FIQFKL
Trigger: GAGTTTAAACTGAATGAACAACCTCGGCTCCTGGAC...CTGGCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CTCTCACCCCAGCTGGGCCAGGAGGAGATGTTCAAAAAGCCTCATGTAAGGTTGCATGTGGGTTGGCACTaGAGCCACCCTGACCCTGAG +
Preference number: 5 (lower is better)
Translates to: LSPQLGQEEMFKKPHVRLHVGWH*SHPDPE
Trigger: CTCAGGGTCAGGGTGGCTCAAGTGCCAACCCACATG...CAACCTTACATGAGGCTTTTTGAACATCTCCTCCTGGCCCAGCTGGGGTGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGGCTGGGGGTAGGGCATaGTGGTTGAAGCCAGATAAC +
Preference number: 5 (lower is better)
Translates to: PHAMGTMSISSCHISRCLAGGRA*WLKPDN
Trigger: GTTATCTGGCTTCAACCACAATGCCCTACCCCCAGC...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp GACACAGAGCCATGGCCTTGTTGGATCTTTGGGCATCCGACTGTGCTTGGCCACGGCCTTGTTGGATCTTaGGGCATCCGACTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: DTEPWPCWIFGHPTVLGHGLVGS*GIRLCL
Trigger: CAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCC...GTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCACAGAGCCATGGCCTaGTTGGATCTTTGGGCATCC +
Preference number: 5 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAHRAMA*LDLWAS
Trigger: GGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTG...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp CCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCGAAGCTGATTCTGCTTaGCCACCTGAGGCGCACAGA +
Preference number: 5 (lower is better)
Translates to: PCHGDHEHQQLPHQQVFAEADSA*PPEAHR
Trigger: TCTGTGCGCCTCAGGTGGCAAAGCAGAATCAGCTTC...GGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TCAGATGGGCTGAGCAAGGCTCAAAGGCAGTGCCTTCGAGGACTTGCTCTCACCATCTCCTTCTTGGAATaGAGGAAGGTGAACGGCGGG +
Preference number: 5 (lower is better)
Translates to: SDGLSKAQRQCLRGLALTISFLE*RKVNGG
Trigger: CCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGAT...GGTGAGAGCAAGTCCTCGAAGGCACTGCCTTTGAGCCTTGCTCAGCCCATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp TGCGGGTGCTGCTGGAACCCCCTGACTGGAGTACAACACACAGAGATAGCCCTGCATGAGCATCAGCAGTaGCCACATCAGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: CGCCWNPLTGVQHTEIALHEHQQ*PHQQVF
Trigger: AAACACCTGCTGATGTGGCAACTGCTGATGCTCATG...CAGGGCTATCTCTGTGTGTTGTACTCCAGTCAGGGGGTTCCAGCAGCACCCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp AACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTCTCCTCCCTTCCACTAGGCTCCTCAGGGACTaGGAGAAGTCCCGAGTATTT +
Preference number: 5 (lower is better)
Translates to: NNEPCPLWARAWPLLPSTRLLRD*EKSRVF
Trigger: AAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCT...AGTGGAAGGGAGGAGAGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCGCTCCTGCAAGGCCGTaGCTGAGGATACAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGAPARP*LRIQCS
Trigger: GCTGCACTGTATCCTCAGCAACGGCCTTGCAGGAGC...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCACCTGGCCAAGATCTaGGACCAGAGTATCACATGC +
Preference number: 5 (lower is better)
Translates to: PHAMGTMSISSCHISRCLHLAKI*DQSITC
Trigger: GCATGTGATACTCTGGTCCAAGATCTTGGCCAGGTG...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCACAGGTCCCTGAGGGTTaGAGCCTACTTCAATGCATG +
Preference number: 5 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAQVPEG*SLLQCM
Trigger: CATGCATTGAAGTAGGCTCAAACCCTCAGGGACCTG...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383754.7
ENST00000447324.5
CDS-3UTR CAA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCAGCCTTGGGACAGTACTaGCCTGATTCCTCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPAALGQY*PDSSFW
Trigger: CCAGAAAGAGGAATCAGGCAAGTACTGTCCCAAGGC...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATGCAATGAGCTGAGATaGCGTGCCATTGCACTCCAG +
Preference number: 5 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPACNELR*RAIALQ
Trigger: CTGGAGTGCAATGGCACGCAATCTCAGCTCATTGCA...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTAGTTTAAACTCCTCCTaGGTCACTTCTTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GPHAMGTMSISSCHISRCSLNSS*VTSSLG
Trigger: CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACT...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CAA 90 bp CCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCATGAGCATCAGCAGTaGCCACATCAGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: PHAMGTMSISSCHISRCLHEHQQ*PHQQVF
Trigger: AAACACCTGCTGATGTGGCAACTGCTGATGCTCATG...CAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CAA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAAGTGCCTTCGAGGACTaGCTCTCACCCCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SAVATSAGVCPCIIFEARSAFED*LSPQLG
Trigger: GCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACT...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CCTTCCACTGGCCTCCTAAGTAGAAAAGCGCTGGAAAGGTTGGGGAGGAGTGTGCACCTGGCCAAGATCTaGGACCAGAGTATCACATGC +
Preference number: 5 (lower is better)
Translates to: PSTGLLSRKALERLGRSVHLAKI*DQSITC
Trigger: GCATGTGATACTCTGGTCCAAGATCTTGGCCAGGTG...CACACTCCTCCCCAACCTTTCCAGCGCTTTTCTACTTAGGAGGCCAGTGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCAAGGCAGGAGAATCATTaGAACACGGAAGGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPRQENH*NTEGEG
Trigger: ACCTTCACCTTCCGTGTTCAAATGATTCTCCTGCCT...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCGCTGGGGGTAGGGCATaGTGGTTGAAGCCAGATAAC +
Preference number: 5 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGAGGRA*WLKPDN
Trigger: GTTATCTGGCTTCAACCACAATGCCCTACCCCCAGC...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCGAGTACTTCTGGTTTTaGGAGAGTCTGGGACCCTCC +
Preference number: 5 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGEYFWF*ESLGPS
Trigger: GGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACTC...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp AGAGTGAACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCACATGAGCATCAGCAGTaGCCACATCAGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: RVNQAWKNNEPCPLWARAHEHQQ*PHQQVF
Trigger: AAACACCTGCTGATGTGGCAACTGCTGATGCTCATG...TGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp ATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTAACCTCCTATAACTCAAGTGCCTTCGAGGACTaGCTCTCACCCCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: MASYTEREILDCLTSYNSSAFED*LSPQLG
Trigger: GCCCAGCTGGGGTGAGAGCAAGTCCTCGAAGGCACT...TGAGTTATAGGAGGTTAAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp AGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGGCTCCTGCAAGGCCGTaGCTGAGGATACAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: SRGCSFSLNSSLVTSSLGAPARP*LRIQCS
Trigger: GCTGCACTGTATCCTCAGCAACGGCCTTGCAGGAGC...CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CAA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCATTCCCTGCCTTTATATaGGAATTTCTACAGAGACCC +
Preference number: 5 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPFPAFI*EFLQRP
Trigger: GGGTCTCTGTAGAAATTCCAATATAAAGGCAGGGAA...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAGCCAAGGTCGCACCTTaGCACTCCAGTCTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: SAVATSAGVCPCIIFEARAKVAP*HSSLGN
Trigger: GTTACCCAGACTGGAGTGCAAAGGTGCGACCTTGGC...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp GGGGGTAGGGCATTGTGGTTGAAGCCAGATAACATTCCCAAGGTCACACAATTCATCTCCTTCTTGGAATaGAGGAAGGTGAACGGCGGG +
Preference number: 5 (lower is better)
Translates to: GGRALWLKPDNIPKVTQFISFLE*RKVNGG
Trigger: CCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGAT...GAATTGTGTGACCTTGGGAATGTTATCTGGCTTCAACCACAATGCCCTACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp GGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATGTCCAGGAGCCGAGGTaGTTCATTCAGTTTAAACTC +
Preference number: 5 (lower is better)
Translates to: GTMSISSCHISRCLPLHNVQEPR*FIQFKL
Trigger: GAGTTTAAACTGAATGAACAACCTCGGCTCCTGGAC...ATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CAA 90 bp CTTCAGTGGTCAGGCTCCTCAGGGACTTGGAGAAGTCCCGAGTATTTTTGTGTGAAAAAGAACTGTGCATaGAGCTCTAGAGCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: LQWSGSSGTWRSPEYFCVKKNCA*SSRACG
Trigger: CCCGCAGGCTCTAGAGCTCAATGCACAGTTCTTTTT...CACACAAAAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCTGACCACTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp TGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTTACTCAGAAAATAACTaGGATCTTCCCCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: CHGDHEHQQLPHQQVFAPYSENN*DLPQSQ
Trigger: TTGGCTCTGGGGAAGATCCAAGTTATTTTCTGAGTA...AGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp GGCCCCCATGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTCAGATATCCCATCATaGGAAACACTTCATAGTAGA +
Preference number: 5 (lower is better)
Translates to: GPHAMGTMSISSCHISRCSDIPS*ETLHSR
Trigger: TCTACTATGAAGTGTTTCCAATGATGGGATATCTGA...ACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAAGGCAGGAGAATGGCTaGAACCCGGGAGGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: SAVATSAGVCPCIIFEARRQENG*NPGGED
Trigger: ATCTTCACCTCCCGGGTTCAAGCCATTCTCCTGCCT...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAATCTCCTTCTTGGAATaGAGGAAGGTGAACGGCGGG +
Preference number: 5 (lower is better)
Translates to: SAVATSAGVCPCIIFEARISFLE*RKVNGG
Trigger: CCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGAT...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CAA 90 bp GGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATAGTTTAAACTCCTCCTaGGTCACTTCTTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GTMSISSCHISRCLPLHNSLNSS*VTSSLG
Trigger: CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACT...ATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CAA 90 bp CCCCTTTCCACACTTAACTCTCTTCTCCCCCAAGGCAAAGCTCCTGTCCTATTTAAAAAGAACTGTGCATaGAGCTCTAGAGCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: PLSTLNSLLPQGKAPVLFKKNCA*SSRACG
Trigger: CCCGCAGGCTCTAGAGCTCAATGCACAGTTCTTTTT...AAATAGGACAGGAGCTTTGCCTTGGGGGAGAAGAGAGTTAAGTGTGGAAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACACGCACACACCAGTCCACAGGAGCACAAGGTACTCAGAAAATAACTaGGATCTTCCCCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTPVHRSTRYSENN*DLPQSQ
Trigger: TTGGCTCTGGGGAAGATCCAAGTTATTTTCTGAGTA...CCTTGTGCTCCTGTGGACTGGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp TTGGACCAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGCTAAGGATCCTCAACTaGACCCAGGGGAAAACTCCC +
Preference number: 5 (lower is better)
Translates to: LDQSITCGMKSKNRVPRWLRILN*TQGKTP
Trigger: GGGAGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAG...CCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGACTAAGGATCCTCAACTaGACCCAGGGGAAAACTCCC +
Preference number: 5 (lower is better)
Translates to: SAVATSAGVCPCIIFEARLRILN*TQGKTP
Trigger: GGGAGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAG...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp AACCAAGCCTGGAAGAACAATGAACCTTGTCCCCTGTGGGCTAGGGCATGGCCTTCTTCAATCCCGACTTaGGGAGCCAATAAACAATGT +
Preference number: 5 (lower is better)
Translates to: NQAWKNNEPCPLWARAWPSSIPT*GANKQC
Trigger: ACATTGTTTATTGGCTCCCAAAGTCGGGATTGAAGA...AGGCCATGCCCTAGCCCACAGGGGACAAGGTTCATTGTTCTTCCAGGCTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGGCACAAGCACTGAGCAAGAAAGTGTAGTCTaGCTGGGTAGGGAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: HMRNEEQEQSSKVGTSTEQESVV*LGRERA
Trigger: AGCTCTTTCCCTACCCAGCAAGACTACACTTTCTTG...CTCAGTGCTTGTGCCCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCACTAAGACATATAACCTaGAATATACCCCCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: HGDHEHQQLPHQQVFAPALRHIT*NIPPGF
Trigger: AAAGCCTGGGGGTATATTCAAGGTTATATGTCTTAG...TGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATAAGAGCCATGGCCTTGTaGGATCTTTGGGCATCCGAC +
Preference number: 5 (lower is better)
Translates to: QITSLNFTATTPKCRRLIRAMAL*DLWASD
Trigger: GTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCT...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCAGAATTCAGTAGTTTCTaGTTACTAACATTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPEFSSF*LLTFLG
Trigger: GCCCAGAAATGTTAGTAACAAGAAACTACTGAATTC...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGCCCTGAGGCCCCCATGCCAAGGAAGGAATCTGCATaGTGGAAATATTTACACCAT +
Preference number: 5 (lower is better)
Translates to: WDDIFKVLQAGCPEAPMPRKESA*WKYLHH
Trigger: ATGGTGTAAATATTTCCACAATGCAGATTCCTTCCT...TGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS GCA 90 bp GTGTCATACAAGGCCAGCATGCTCTGCAACATGAGAATGTGCTGGTaGAATGGCATGAAAAGTCCACAGAAGAGAGGGCAATATGTTGGG +
Preference number: 5 (lower is better)
Translates to: VSYKASMLCNMRMCW*NGMKSPQKRGQYVG
Trigger: CCCAACATATTGCCCTCTCTTCTGTGGACTTTTCATGCCATTGCACCAGCACATTCTCATGTTGCAGAGCATGCTGGCCTTGTATGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436143.6
CDS-3UTR CAA 90 bp CCCATCATAATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAGTCCAGGAGCCGAGGTaGTTCATTCAGTTTAAACTC +
Preference number: 5 (lower is better)
Translates to: PIIIGFRPLTSGNGLLHRVQEPR*FIQFKL
Trigger: GAGTTTAAACTGAATGAACAACCTCGGCTCCTGGAC...TCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATTATGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTCATGAGCATCAGCAGTaGCCACATCAGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: TMSISSCHISRCLPLHNIHEHQQ*PHQQVF
Trigger: AAACACCTGCTGATGTGGCAACTGCTGATGCTCATG...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000424090.5
ENST00000442631.5
ENST00000447324.5
ENST00000452959.6
CDS-3UTR CAA 90 bp AACAGAGAGAAGAGATGGGAAGTCAATGCCCAACCCTGTCCCATCATAATTGGGGGTAGGGCATTGTGGTaGAAGCCAGATAACATTCCC +
Preference number: 5 (lower is better)
Translates to: NREKRWEVNAQPCPIIIGGRALW*KPDNIP
Trigger: GGGAATGTTATCTGGCTTCAACCACAATGCCCTACC...CCCAATTATGATGGGACAGGGTTGGGCATTGACTTCCCATCTCTTCTCTCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp GACACAGAGCCATGGCCTTGTTGGATCTTTGGGCATCCGACTGTGCTTGGCCACAGACTTCATCTGACATaGCCCCTATATTTTTACTTG +
Preference number: 5 (lower is better)
Translates to: DTEPWPCWIFGHPTVLGHRLHLT*PLYFYL
Trigger: CAAGTAAAAATATAGGGGCAATGTCAGATGAAGTCT...GTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TGCCATGGGGACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTTTTGATACTGACCACTaGCTGTTTTGTGTTTATCAC +
Preference number: 5 (lower is better)
Translates to: CHGDHEHQQLPHQQVFAPFDTDH*LFCVYH
Trigger: GTGATAAACACAAAACAGCAAGTGGTCAGTATCAAA...AGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp GGCCATGGATATATACAGTGGTGCACTGGCACCAGCTTGTGCCAGCTGACGAGAATCTCTGTTATGAGCTaGTCTTGGTATCATTTGCTT +
Preference number: 5 (lower is better)
Translates to: GHGYIQWCTGTSLCQLTRISVMS*SWYHLL
Trigger: AAGCAAATGATACCAAGACAAGCTCATAACAGAGAT...TCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp CCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTATCTCCTTCTTGGAATaGAGGAAGGTGAACGGCGGG +
Preference number: 5 (lower is better)
Translates to: PRLFIQFKLLLGHFFFGVISFLE*RKVNGG
Trigger: CCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGAT...AACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CAA 90 bp TCAAACAGAGGGGATTTAATGGAGGGAGCTGATTACACAGGTTGGGTAATAAGGATCTCCTTCTTGGAATaGAGGAAGGTGAACGGCGGG +
Preference number: 5 (lower is better)
Translates to: SNRGDLMEGADYTGWVIRISFLE*RKVNGG
Trigger: CCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGAT...CCTTATTACCCAACCTGTGTAATCAGCTCCCTCCATTAAATCCCCTCTGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441980.6
CDS-3UTR CAA 90 bp ATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGATCTTCATCTCCTTCTTGGAATaGAGGAAGGTGAACGGCGGG +
Preference number: 5 (lower is better)
Translates to: IQFKLLLGHFFFGVGLIFISFLE*RKVNGG
Trigger: CCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGAT...GAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CAA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCGTCCAGGAGCCGAGGTaGTTCATTCAGTTTAAACTC +
Preference number: 5 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVVQEPR*FIQFKL
Trigger: GAGTTTAAACTGAATGAACAACCTCGGCTCCTGGAC...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CAA 90 bp GAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGCATGAGCATCAGCAGTaGCCACATCAGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: EPRLFIQFKLLLGHFFFGHEHQQ*PHQQVF
Trigger: AAACACCTGCTGATGTGGCAACTGCTGATGCTCATG...CCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311042.10
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CAA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATACATGAGCATCAGCAGTaGCCACATCAGCAGGTGTTT +
Preference number: 5 (lower is better)
Translates to: QITSLNFTATTPKCRRLIHEHQQ*PHQQVF
Trigger: AAACACCTGCTGATGTGGCAACTGCTGATGCTCATG...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCTCTCTAGGGATTTCTTaGCATCTCTGGATCATATGG +
Preference number: 5 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGSLGIS*HLWIIW
Trigger: CCATATGATCCAGAGATGCAAAGAAATCCCTAGAGA...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTAGGCTCCTCAGGGACTaGGAGAAGTCCCGAGTATTT +
Preference number: 5 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFRLLRD*EKSRVF
Trigger: AAATACTCGGGACTTCTCCAAGTCCCTGAGGAGCCT...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTCAGGTCCCTGAGGGTTaGAGCCTACTTCAATGCATG +
Preference number: 5 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFQVPEG*SLLQCM
Trigger: CATGCATTGAAGTAGGCTCAAACCCTCAGGGACCTG...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383754.7
CDS-3UTR CAA 90 bp CCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTCAGGTCCCTGAGGGTTaGAGCCTACTTCAATGCATG +
Preference number: 5 (lower is better)
Translates to: PRLFIQFKLLLGHFFFGVQVPEG*SLLQCM
Trigger: CATGCATTGAAGTAGGCTCAAACCCTCAGGGACCTG...AACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420739.5
CDS-3UTR CAA 90 bp AACAGAGAGAAGAGATGGGAAGTCAATGCCCAACCCTGTCCCATCATAATTGGGAGTTTAAACTCCTCCTaGGTCACTTCTTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: NREKRWEVNAQPCPIIIGSLNSS*VTSSLG
Trigger: CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACT...CCCAATTATGATGGGACAGGGTTGGGCATTGACTTCCCATCTCTTCTCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCAGTTTAAACTCCTCCTaGGTCACTTCTTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVSLNSS*VTSSLG
Trigger: CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACT...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CAA 90 bp TCCACAGGAGCACAAGGTGATCTAAGGATCCTCAACTTGACCCAGGGGAAAACTGATAGAAGGGAATATTaGGAGGACAACATGTGGGTT +
Preference number: 5 (lower is better)
Translates to: STGAQGDLRILNLTQGKTDRREY*EDNMWV
Trigger: AACCCACATGTTGTCCTCCAAATATTCCCTTCTATC...AGTTTTCCCCTGGGTCAAGTTGAGGATCCTTAGATCACCTTGTGCTCCTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGGTAGGGCATTGTGGTaGAAGCCAGATAACATTCCC +
Preference number: 5 (lower is better)
Translates to: RGCSFSLNSSLVTSSLGLGRALW*KPDNIP
Trigger: GGGAATGTTATCTGGCTTCAACCACAATGCCCTACC...CAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311042.10
CDS-3UTR CAA 90 bp CCCCTCACATCAGGAAATGGCCTCCTACACAGAGAGAGAAATCTTGGACTGCTTTCTTCAATCCCGACTTaGGGAGCCAATAAACAATGT +
Preference number: 5 (lower is better)
Translates to: PLTSGNGLLHRERNLGLLSSIPT*GANKQC
Trigger: ACATTGTTTATTGGCTCCCAAAGTCGGGATTGAAGA...AAGCAGTCCAAGATTTCTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CGAGTTTTCAAGGGAAGCACCTCTGAGACGATATTTGAGCAGAAGGCACCTGGCATCTCTGTTATGAGCTaGTCTTGGTATCATTTGCTT +
Preference number: 5 (lower is better)
Translates to: RVFKGSTSETIFEQKAPGISVMS*SWYHLL
Trigger: AAGCAAATGATACCAAGACAAGCTCATAACAGAGAT...GCCAGGTGCCTTCTGCTCAAATATCGTCTCAGAGGTGCTTCCCTTGAAAACTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAGATAGAAGGGAATATTaGGAGGACAACATGTGGGTT +
Preference number: 5 (lower is better)
Translates to: SAVATSAGVCPCIIFEARDRREY*EDNMWV
Trigger: AACCCACATGTTGTCCTCCAAATATTCCCTTCTATC...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTCTCTAGGGATTTCTTaGCATCTCTGGATCATATGG +
Preference number: 5 (lower is better)
Translates to: TMSISSCHISRCLPLHNISLGIS*HLWIIW
Trigger: CCATATGATCCAGAGATGCAAAGAAATCCCTAGAGA...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CCCCTTTCCACACTTAACTCTCTTCTCCCCCAAGGCAAAGCTCCTGTCCTATTTAATCCCAGCTGGAATTaGAATAGAGATGGATTCACT +
Preference number: 5 (lower is better)
Translates to: PLSTLNSLLPQGKAPVLFNPSWN*NRDGFT
Trigger: AGTGAATCCATCTCTATTCAAATTCCAGCTGGGATT...AAATAGGACAGGAGCTTTGCCTTGGGGGAGAAGAGAGTTAAGTGTGGAAAGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp GAGTGTGCAGAAGGATTCATTGCCTGCATCTTTTCACTCTTCAATCCCGACTTTCAAGAAAGTGTAGTCTaGCTGGGTAGGGAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: ECAEGFIACIFSLFNPDFQESVV*LGRERA
Trigger: AGCTCTTTCCCTACCCAGCAAGACTACACTTTCTTG...AAAGTCGGGATTGAAGAGTGAAAAGATGCAGGCAATGAATCCTTCTGCACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CCAGCAAGCACTATGGGCCTGGCTTTGCCAAAATCTAAAACAGGCCAAAGGGATTTACTAAACAAAGGTTaGGGTGGAAGGACGTATTTC +
Preference number: 5 (lower is better)
Translates to: PASTMGLALPKSKTGQRDLLNKG*GGRTYF
Trigger: GAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAA...ATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp GCAATTATAGAGGTCAGAAGACAATGGGATGACATCTTCAAAGTACTCCAGGCAGGCTGGGCCAGTAATTaGTTCTCACTTACAGTGGTC +
Preference number: 5 (lower is better)
Translates to: AIIEVRRQWDDIFKVLQAGWASN*FSLTVV
Trigger: GACCACTGTAAGTGAGAACAAATTACTGGCCCAGCC...TGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp AGGTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCCAGAGACCCAGTTGTaGGGTATTTACGAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: RLYNFLLCQYPQIATQRCPETQL*GIYEEN
Trigger: GTTTTCCTCGTAAATACCCAACAACTGGGTCTCTGG...ACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS TCA 90 bp GCGTGGACCTGCCTTCAAGCTGTATTTTCATCCGTACACATCTGCTaGTTGGATCTCTGTTATGAGCTTGTCTTGGTATCATTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: AWTCLQAVFSSVHIC*LDLCYELVLVSFAS
Trigger: AGAAGCAAATGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGCTTGAAGGCAGGTCCACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428261.5
ENST00000436143.6
CDS-3UTR CAA 90 bp CCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTAGTTTAAACTCCTCCTaGGTCACTTCTTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PRLFIQFKLLLGHFFFGVSLNSS*VTSSLG
Trigger: CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACT...AACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CAA 90 bp ATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCCTGATCTTCAGTTTAAACTCCTCCTaGGTCACTTCTTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: IQFKLLLGHFFFGVGLIFSLNSS*VTSSLG
Trigger: CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACT...GAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000442631.5
CDS-3UTR CAA 90 bp AATTGGGTTCAGACCCCTCACATCAGGAAATGGCCTCCTACACAGAGAGAGAAAAAGTCCCGAGTATTTTaGTGTGAGAGAGAAAATGAG +
Preference number: 5 (lower is better)
Translates to: NWVQTPHIRKWPPTQREKKSRVF*CERENE
Trigger: CTCATTTTCTCTCTCACACAAAAATACTCGGGACTT...TTTCTCTCTCTGTGTAGGAGGCCATTTCCTGATGTGAGGGGTCTGAACCCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CCAGCAAGCACTATGGGCCTGGCTTTGCCAAAATCTAAAACAGGCCAAAGGGATCTATTGGTGGACATTTaGGTAATTTCTCATGATCTC +
Preference number: 5 (lower is better)
Translates to: PASTMGLALPKSKTGQRDLLVDI*VISHDL
Trigger: GAGATCATGAGAAATTACCAAAATGTCCACCAATAG...ATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAAATCATGTTCATAGCTaGAAATCTGCATCATGGTCC +
Preference number: 5 (lower is better)
Translates to: SAVATSAGVCPCIIFEARNHVHS*KSASWS
Trigger: GGACCATGATGCAGATTTCAAGCTATGAACATGATT...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TTGGACCAGAGTATCACATGCGGAATGAAGAGCAAGAACAGAGTTCCAAGGTGGATCTCTGTTATGAGCTaGTCTTGGTATCATTTGCTT +
Preference number: 5 (lower is better)
Translates to: LDQSITCGMKSKNRVPRWISVMS*SWYHLL
Trigger: AAGCAAATGATACCAAGACAAGCTCATAACAGAGAT...CCACCTTGGAACTCTGTTCTTGCTCTTCATTCCGCATGTGATACTCTGGTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp GAGCCAATAAACAATGTAGCTAAGTTTGGGCCCAAAACAAGCCAGGAAGACTCCAATCCCAGCTGGAATTaGAATAGAGATGGATTCACT +
Preference number: 5 (lower is better)
Translates to: EPINNVAKFGPKTSQEDSNPSWN*NRDGFT
Trigger: AGTGAATCCATCTCTATTCAAATTCCAGCTGGGATT...GGAGTCTTCCTGGCTTGTTTTGGGCCCAAACTTAGCTACATTGTTTATTGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp CAAATCACAAGTCTAAATTTCACTGCCACCACCCCAAAATGCAGGCGGCTCATATTGCTTGATCACAGGTaGTACAATTTTCTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: QITSLNFTATTPKCRRLILLDHR*YNFLLC
Trigger: GCAAAGCAGAAAATTGTACAACCTGTGATCAAGCAA...TATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp AGCAATGAGTCCAGGAGCCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCCTATTGGTGGACATTTaGGTAATTTCTCATGATCTC +
Preference number: 5 (lower is better)
Translates to: SNESRSRGCSFSLNSSLVLLVDI*VISHDL
Trigger: GAGATCATGAGAAATTACCAAAATGTCCACCAATAG...GACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424090.5
CDS-3UTR CAA 90 bp TTCTACCTGAAGACTCCATGCAGTCAAATTTCCCTGCCTTTATATTGGAATTTCCTTATTTGGTGTGGGTaGGGCTGGGCCAGTAATTTG +
Preference number: 5 (lower is better)
Translates to: FYLKTPCSQISLPLYWNFLIWCG*GWASNL
Trigger: CAAATTACTGGCCCAGCCCAACCCACACCAAATAAG...GAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTTGAAGCCAGAAATTGTCAGATAGTTTaGATTCATCCCCAGAAGGTT +
Preference number: 5 (lower is better)
Translates to: SAVATSAGVCPCIIFEARNCQIV*IHPQKV
Trigger: AACCTTCTGGGGATGAATCAAAACTATCTGACAATT...TCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp ACCATGAGCATCAGCAGTTGCCACATCAGCAGGTGTTTGCCCCTGCATAATATTCTCTTACTAGTGCCTTaGTATATTTATGGAGCACAA +
Preference number: 5 (lower is better)
Translates to: TMSISSCHISRCLPLHNILLLVP*YIYGAQ
Trigger: TTGTGCTCCATAAATATACAAAGGCACTAGTAAGAG...AATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TATACCACAGGTGATTCACTCATTCTATTGGTGGACATTTTGGTAATTTCTCATATCTCCTTCTTGGAATaGAGGAAGGTGAACGGCGGG +
Preference number: 5 (lower is better)
Translates to: YTTGDSLILLVDILVISHISFLE*RKVNGG
Trigger: CCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGAT...ATGAGAAATTACCAAAATGTCCACCAATAGAATGAGTGAATCACCTGTGGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424090.5
ENST00000452959.6
CDS-3UTR CAA 90 bp TTCCTACCTATTACTAAACAAAGGTTTGGGTGGAAGGACGTATTTCAACTCTTCGTCCAGGAGCCGAGGTaGTTCATTCAGTTTAAACTC +
Preference number: 5 (lower is better)
Translates to: FLPITKQRFGWKDVFQLFVQEPR*FIQFKL
Trigger: GAGTTTAAACTGAATGAACAACCTCGGCTCCTGGAC...GAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp AGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTGGCTTGCTTGATCACAGGTaGTACAATTTTCTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: RLFIQFKLLLGHFFFGVGLLDHR*YNFLLC
Trigger: GCAAAGCAGAAAATTGTACAACCTGTGATCAAGCAA...GCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424090.5
CDS-3UTR CAA 90 bp TTCTACCTGAAGACTCCATGCAGTCAAATTTCCCTGCCTTTATATTGGAATTTCACTATGGGCCTGGCTTaGCCAAAATCTAAAACAGGC +
Preference number: 5 (lower is better)
Translates to: FYLKTPCSQISLPLYWNFTMGLA*PKSKTG
Trigger: GCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGT...GAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TTCTACCTGAAGACTCCATGCAGTCAAATTTCCCTGCCTTTATATTGGAATTTCATCTTCTCTTCTTTCTaGACCGTCAGCTCAGCCATC +
Preference number: 5 (lower is better)
Translates to: FYLKTPCSQISLPLYWNFIFSSF*TVSSAI
Trigger: GATGGCTGAGCTGACGGTCAAGAAAGAAGAGAAGAT...GAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS TCA 90 bp CGGTTTCTGACTCATCTCACTGTATTTTCATCCGTACACATCTGCTaGTTGGATCTCTGTTATGAGCTTGTCTTGGTATCATTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: RFLTHLTVFSSVHIC*LDLCYELVLVSFAS
Trigger: AGAAGCAAATGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGTGAGATGAGTCAGAAACCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000420739.5
ENST00000451925.5
ENST00000452959.6
CDS-3UTR CAA 90 bp CCGAGGTTGTTCATTCAGTTTAAACTCCTCCTTGGTCACTTCTTCTTTGGGGTTATCTCTGTTATGAGCTaGTCTTGGTATCATTTGCTT +
Preference number: 5 (lower is better)
Translates to: PRLFIQFKLLLGHFFFGVISVMS*SWYHLL
Trigger: AAGCAAATGATACCAAGACAAGCTCATAACAGAGAT...AACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000420739.5
CDS-3UTR CAA 90 bp CAAAAATTAAAAGTTGAGCTCAGCAACAGCATGCCAGGGATAGAAGGGAATATTAGTTTAAACTCCTCCTaGGTCACTTCTTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: QKLKVELSNSMPGIEGNISLNSS*VTSSLG
Trigger: CCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACT...AATATTCCCTTCTATCCCTGGCATGCTGTTGCTGAGCTCAACTTTTAATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp GTTGTACAATTTTCTGCTTTGCCAGTATCCCCAGATTGCAACCCAAAGGTGTCATCCCTTCTGACTGTTTaGTCTCCTTATAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: VVQFSALPVSPDCNPKVSSLLTV*SPYRKK
Trigger: TTTCTTTCTATAAGGAGACAAAACAGTCAGAAGGGA...TGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp CAAAAATTAAAAGTTGAGCTCAGCAACAGCATGCCAGGGATAGAAGGGAATATTAAGTCCCGAGTATTTTaGTGTGAGAGAGAAAATGAG +
Preference number: 5 (lower is better)
Translates to: QKLKVELSNSMPGIEGNIKSRVF*CERENE
Trigger: CTCATTTTCTCTCTCACACAAAAATACTCGGGACTT...AATATTCCCTTCTATCCCTGGCATGCTGTTGCTGAGCTCAACTTTTAATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311042.10
ENST00000383754.7
CDS-3UTR CAA 90 bp GATTCACTCATTCTATTGGTGGACATTTTGGTAATTTCTCATGATCTCTCTCCTGATCCCATCAATTCTTaGGTCAGCTTCATGTTAGCA +
Preference number: 5 (lower is better)
Translates to: DSLILLVDILVISHDLSPDPINS*VSFMLA
Trigger: TGCTAACATGAAGCTGACCAAAGAATTGATGGGATC...AGGAGAGAGATCATGAGAAATTACCAAAATGTCCACCAATAGAATGAGTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TTCTACCTGAAGACTCCATGCAGTCAAATTTCCCTGCCTTTATATTGGAATTTCTTCCAGATATTATGGTaGAGAATTCCCACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: FYLKTPCSQISLPLYWNFFQILW*RIPTQE
Trigger: TTCTTGAGTGGGAATTCTCAACCATAATATCTGGAA...GAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TTCCTACCTATTACTAAACAAAGGTTTGGGTGGAAGGACGTATTTCAACTCTTCGTCCATGGGTTCTTATaGACATTTCTAATTTACCTC +
Preference number: 5 (lower is better)
Translates to: FLPITKQRFGWKDVFQLFVHGFL*TFLIYL
Trigger: GAGGTAAATTAGAAATGTCAATAAGAACCCATGGAC...GAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TTCTACCTGAAGACTCCATGCAGTCAAATTTCCCTGCCTTTATATTGGAATTTCATACTGTTTTTCTCTTaGATACTGACCACTTGCTGT +
Preference number: 5 (lower is better)
Translates to: FYLKTPCSQISLPLYWNFILFFS*ILTTCC
Trigger: ACAGCAAGTGGTCAGTATCAAAGAGAAAAACAGTAT...GAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS-3UTR CAA 90 bp TTCCTACCTATTACTAAACAAAGGTTTGGGTGGAAGGACGTATTTCAACTCTTCGGTCAAACTTACACCTaGGCATTTTACTTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: FLPITKQRFGWKDVFQLFGQTYT*AFYFVS
Trigger: AGAAACAAAGTAAAATGCCAAGGTGTAAGTTTGACC...GAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452959.6
CDS CAA 90 bp CCCACGGCTGGCGCCTGGCCCTCTGAGGGGGCTGCTGCGCGGCTGTaGCTTGGACTTCTGAGGGGGACGCTGCTTGGCTGGCGGTGGTCG +
Preference number: 6 (lower is better)
Translates to: PTAGAWPSEGAAARL*LGLLRGTLLGWRWS
Trigger: CGACCACCGCCAGCCAAGCAGCGTCCCCCTCAGAAGTCCAAGCAACAGCCGCGCAGCAGCCCCCTCAGAGGGCCAGGCGCCAGCCGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000441980.6
ENST00000442631.5
ENST00000682069.1
CDS CAA 72 bp GGCGCCTGGCCCTCTGAGGGGGCTGCTGCGCGGCTGTaGCTTGGACTTCTGAGGGGGACGCTGCTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: GAWPSEGAAARL*LGLLRGTLLGW
Trigger: CCAGCCAAGCAGCGTCCCCCTCAGAAGTCCAAGCAACAGCCGCGCAGCAGCCCCCTCAGAGGGCCAGGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000441980.6
ENST00000442631.5
ENST00000682069.1
CDS CCA 72 bp GCGGCTGTTGCTTGGACTTCTGAGGGGGACGCTGCTTaGCTGGCGGTGGTCGGACCTCTGGGCGGGGACGTG +
Preference number: 6 (lower is better)
Translates to: AAVAWTSEGDAA*LAVVGPLGGDV
Trigger: CACGTCCCCGCCCAGAGGTCCGACCACCGCCAGCCAAGCAGCGTCCCCCTCAGAAGTCCAAGCAACAGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311042.10
ENST00000420739.5
ENST00000424090.5
ENST00000441980.6
ENST00000442631.5
ENST00000682069.1
CDS CCA 72 bp AGTACTTCTGGTTTTTGGAGAGTCTGGGACCCTCCTTaGCCGGTTTCTGACTCATCTCACTGTGAACTCAGC +
Preference number: 6 (lower is better)
Translates to: STSGFWRVWDPP*PVSDSSHCELS
Trigger: GCTGAGTTCACAGTGAGATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415443.5
ENST00000428261.5
ENST00000441980.6
CDS CCA 72 bp TACAAGGCCAGCATGCTCTGCAACATGAGAATGTGCTaGTGCAATGGCATGAAAAGTCCACAGAAGAGAGGG +
Preference number: 6 (lower is better)
Translates to: YKASMLCNMRMC*CNGMKSPQKRG
Trigger: CCCTCTCTTCTGTGGACTTTTCATGCCATTGCACCAGCACATTCTCATGTTGCAGAGCATGCTGGCCTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436143.6
CDS CCA 72 bp GCAATATGTTGGGCTAGAGAACAAGGTGAAACTTCATaGGCAGAGGCATTTCATCTGGCCAAAGATGAGGGC +
Preference number: 6 (lower is better)
Translates to: AICWAREQGETS*AEAFHLAKDEG
Trigger: GCCCTCATCTTTGGCCAGATGAAATGCCTCTGCCCATGAAGTTTCACCTTGTTCTCTAGCCCAACATATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436143.6
CDS GCA 72 bp TCATACAAGGCCAGCATGCTCTGCAACATGAGAATGTaGTGGTGCAATGGCATGAAAAGTCCACAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: SYKASMLCNMRM*WCNGMKSPQKR
Trigger: TCTCTTCTGTGGACTTTTCATGCCATTGCACCAGCACATTCTCATGTTGCAGAGCATGCTGGCCTTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436143.6
CDS CCA 72 bp AGTACTTCTGGTTTTTGGAGAGTCTGGGACCCTCCTTaGCCGGTTTCTGACTCATCTCACTGTATTTTCATC +
Preference number: 6 (lower is better)
Translates to: STSGFWRVWDPP*PVSDSSHCIFI
Trigger: GATGAAAATACAGTGAGATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000420739.5
ENST00000451925.5
ENST00000452959.6
CDS GCA 72 bp CCTCTTTCTTCTGGTAGAAGCAGCCGCTCTTACAGATaGTGTATTTCCGATCCACTATCTCCTTCTTGGAAT +
Preference number: 6 (lower is better)
Translates to: PLSSGRSSRSYR*CISDPLSPSWN
Trigger: ATTCCAAGAAGGAGATAGTGGATCGGAAATACAGCATCTGTAAGAGCGGCTGCTTCTACCAGAAGAAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000415443.5
ENST00000420739.5
ENST00000424090.5
ENST00000428261.5
ENST00000441980.6
ENST00000442631.5
ENST00000447324.5
ENST00000451925.5
ENST00000452959.6
ENST00000682069.1
CDS TCA 72 bp TTGTGTGAAACAGATTCTGCGTCTATACCAGGTCCCTaGGGGTTTGAGCCTACTTCAATGCATGCAGAATAT +
Preference number: 6 (lower is better)
Translates to: LCETDSASIPGP*GFEPTSMHAEY
Trigger: ATATTCTGCATGCATTGAAGTAGGCTCAAACCCTCAGGGACCTGGTATAGACGCAGAATCTGTTTCACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383754.7
ENST00000415443.5
ENST00000420739.5
ENST00000428261.5
ENST00000447324.5
ENST00000451925.5
CDS TCA 72 bp TGCCTTCAAGCTGTATTTTCATCCGTACACATCTGCTaGTTGGATCTCTGTTATGAGCTTGTCTTGGTATCA +
Preference number: 6 (lower is better)
Translates to: CLQAVFSSVHIC*LDLCYELVLVS
Trigger: TGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGCTTGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428261.5
ENST00000436143.6
CDS TCA 72 bp CTCAGTGGCAATTATAGAGGTCAGAAGACAATGGGATaGCATCTTCAAAGTACTGTACTTTGGATAAACCCA +
Preference number: 6 (lower is better)
Translates to: LSGNYRGQKTMG*HLQSTVLWINP
Trigger: TGGGTTTATCCAAAGTACAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGCCACTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479860.1
CDS CCA 72 bp ATCTCACTGTATTTTCATCCGTACACATCTGCTGATTaGATCTCTGTTATGAGCTTGTCTTGGTATCATTTG +
Preference number: 6 (lower is better)
Translates to: ISLYFHPYTSAD*ISVMSLSWYHL
Trigger: CAAATGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311042.10
ENST00000383754.7
ENST00000420739.5
ENST00000451925.5
ENST00000452959.6
CDS CCA 72 bp TTCAAGCTGTATTTTCATCCGTACACATCTGCTGATTaGATCTCTGTTATGAGCTTGTCTTGGTATCATTTG +
Preference number: 6 (lower is better)
Translates to: FKLYFHPYTSAD*ISVMSLSWYHL
Trigger: CAAATGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428261.5
ENST00000436143.6