RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MOB3C (Homo sapiens)

Ensembl gene IDs: ENSG00000142961

Ensembl transcript IDs: ENST00000271139.13, ENST00000319928.8, ENST00000371940.1

Found 561 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGCATCCCAGAGTGGAGGCTCTGGGAGGGCAGAACCCTGTTCCTaGCTCAGTTTCCCCACCTGTGGGTCTGCGTATAGGGCTGGGTAT +
Preference number: 1 (lower is better)
Translates to: LASQSGGSGRAEPCS*LSFPTCGSAYRAGY
Trigger: ATACCCAGCCCTATACGCAGACCCACAGGTGGGGAAACTGAGGCAGGAACAGGGTTCTGCCCTCCCAGAGCCTCCACTCTGGGATGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp ACAGCACTCTGGGAAAAGCTCCTACTACCCTCGCTCCACAGCCTCTaGCAAAGCTGCCAGGCCACTCTGGAGGCGGCAGAGGCAGAAGTC +
Preference number: 1 (lower is better)
Translates to: TALWEKLLLPSLHSL*QSCQATLEAAEAEV
Trigger: GACTTCTGCCTCTGCCGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAGGAGCTTTTCCCAGAGTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 90 bp GATGGGCCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATaGCTCCCTGTGAGGCCCTGGACAGTTTCTCCCTCTTCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: DGPCGQDPWFLQLHE*LPVRPWTVSPSSSP
Trigger: AGGAGAAGAAGAGGGAGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGGCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR TCA 90 bp GAGTGCTGCGTGAACATCCCAGTCTCCCTGTGGATAGCTGTGCTGTaGGATCCAACTGGCTGGAATGTGTCAGGGATGGCTGGGAAGGAG +
Preference number: 1 (lower is better)
Translates to: ECCVNIPVSLWIAVL*DPTGWNVSGMAGKE
Trigger: CTCCTTCCCAGCCATCCCTGACACATTCCAGCCAGTTGGATCTCACAGCACAGCTATCCACAGGGAGACTGGGATGTTCACGCAGCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR TCA 90 bp GCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTaGGGCCCTGGACAGTTTCTCCCTCTTCTTCTCCTGGCTTCAGTT +
Preference number: 1 (lower is better)
Translates to: AVRIPGFSSSMNASL*GPGQFLPLLLLASV
Trigger: AACTGAAGCCAGGAGAAGAAGAGGGAGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp GTAGGCAGACTCCTGAGAACCAGAAGTCCAGAGGCTTTGGGTGTGTaGAGTGATTCCAGTGCCTTCAGATTCCTTCAGGCTCCTGGGGGT +
Preference number: 1 (lower is better)
Translates to: VGRLLRTRSPEALGV*SDSSAFRFLQAPGG
Trigger: ACCCCCAGGAGCCTGAAGGAATCTGAAGGCACTGGAATCACTCCACACACCCAAAGCCTCTGGACTTCTGGTTCTCAGGAGTCTGCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp GATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCCTaGACAGTTTCTCCCTCTTCTTCTCCTGGCTTCAGTTTCCCCGTA +
Preference number: 1 (lower is better)
Translates to: DPWFLQLHECLPVRP*TVSPSSSPGFSFPV
Trigger: TACGGGGAAACTGAAGCCAGGAGAAGAAGAGGGAGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp GTGTATCTCTATGTAGCAATTGATGGGCCCTGCGGTCAGGATCCCTaGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCCTGGACA +
Preference number: 1 (lower is better)
Translates to: VYLYVAIDGPCGQDP*FLQLHECLPVRPWT
Trigger: TGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGGCCCATCAATTGCTACATAGAGATACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp AGCCCTTGCCACAGCCTAGAATCCATCATGCAAGTCACAGCACTCTaGGAAAAGCTCCTACTACCCTCGCTCCACAGCCTCTGGCAAAGC +
Preference number: 1 (lower is better)
Translates to: SPCHSLESIMQVTAL*EKLLLPSLHSLWQS
Trigger: GCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAGGAGCTTTTCCCAGAGTGCTGTGACTTGCATGATGGATTCTAGGCTGTGGCAAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 90 bp CTGTGCTCACTCACAGGCAGACTGCTCACTTTCTTGCACCTTTCTTaGCATCACCTCGGCCACACCCACATTCCTCCAATAGGCTTGGGA +
Preference number: 1 (lower is better)
Translates to: LCSLTGRLLTFLHLS*HHLGHTHIPPIGLG
Trigger: TCCCAAGCCTATTGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAGCAGTCTGCCTGTGAGTGAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR TCA 90 bp CCGAGGAGCCAGGTCTGTAGATTCTGGGAGCTAGAGTGGAGTATATaGTTCCCAGATGAAGGGCCAGGGGACCTTTGTGTACTTGAGGGA +
Preference number: 1 (lower is better)
Translates to: PRSQVCRFWELEWSI*FPDEGPGDLCVLEG
Trigger: TCCCTCAAGTACACAAAGGTCCCCTGGCCCTTCATCTGGGAATCATATACTCCACTCTAGCTCCCAGAATCTACAGACCTGGCTCCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 90 bp CCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTaGTGGGCTTCAGATCCGAGGAGCCAGGTCTGTAGATTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: PNSSSTSSLDGEIIL*WASDPRSQVCRFWE
Trigger: CTCCCAGAATCTACAGACCTGGCTCCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp GCTGGGAAGGAGGCAGGTACTTTTAGGATGGAGGATCTCCATGCCTaGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGG +
Preference number: 1 (lower is better)
Translates to: AGKEAGTFRMEDLHA*KSPFTNYILNVLGW
Trigger: CCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCCTAAAAGTACCTGCCTCCTTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 90 bp AAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTaGGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCT +
Preference number: 1 (lower is better)
Translates to: KPSFHVYLYVAIDGP*GQDPWFLQLHECLP
Trigger: AGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp GGAGACAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTaGACGGGGAGATTATTTTGTGCTGGGCTTCAGATCCGAGGAGCC +
Preference number: 1 (lower is better)
Translates to: GDKTPKFPIQVPQAP*TGRLFCAGLQIRGA
Trigger: GGCTCCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTaGGCTTCAGATCCGAGGAGCCAGGTCTGTAGATTCTGGGAGCTA +
Preference number: 1 (lower is better)
Translates to: NSSSTSSLDGEIILC*ASDPRSQVCRFWEL
Trigger: TAGCTCCCAGAATCTACAGACCTGGCTCCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp GCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATaGGAGACAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTC +
Preference number: 1 (lower is better)
Translates to: AWKSPFTNYILNVLG*ETRLQSSQFKFHKL
Trigger: GAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR TCA 90 bp TCTACAACCACATTTTTGTGCACTTACACACATGGTCAGATACACTaGGTGGGGACGCTGAGCTGTCATCACTCCTACAGTGGTCATGGT +
Preference number: 1 (lower is better)
Translates to: STTTFLCTYTHGQIH*VGTLSCHHSYSGHG
Trigger: ACCATGACCACTGTAGGAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCACAAAAATGTGGTTGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 90 bp AATCTATTTATCCATCCATCCAACATTTATGGAAGGCCTACTATGTaGCAAGGAGGGGTAAGGCAGCTAGCTCTCACAGACACACCCCAC +
Preference number: 1 (lower is better)
Translates to: NLFIHPSNIYGRPTM*QGGVRQLALTDTPH
Trigger: GTGGGGTGTGTCTGTGAGAGCTAGCTGCCTTACCCCTCCTTGGCACATAGTAGGCCTTCCATAAATGTTGGATGGATGGATAAATAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 90 bp ATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGTaGTGGGATGGGAGACAAGACTCCAAAGTTCCCAATTCAAGTTCC +
Preference number: 1 (lower is better)
Translates to: ISMPGRVHSPTTSSM*WDGRQDSKVPNSSS
Trigger: GGAACTTGAATTGGGAACTTTGGAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp TCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTaGGATGGGAGACAAGACTCCAAAGTTCCCAATTCAAGTTCCACA +
Preference number: 1 (lower is better)
Translates to: SMPGRVHSPTTSSMC*DGRQDSKVPNSSST
Trigger: TGTGGAACTTGAATTGGGAACTTTGGAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 90 bp AACCCAAGGGGCAGTGGGACATGTTGGCCTCAGGTTAGAAATTATTaGTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAAC +
Preference number: 1 (lower is better)
Translates to: NPRGSGTCWPQVRNY*SKQKQLCPREGLLN
Trigger: GTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCAACATGTCCCACTGCCCCTTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR TCA 90 bp CTGTCATCACTCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTaGTGGTCCCAATCTATTTATCCATCCATCCAACATTTATGGAAG +
Preference number: 1 (lower is better)
Translates to: LSSLLQWSWSDGPMV*WSQSIYPSIQHLWK
Trigger: CTTCCATAAATGTTGGATGGATGGATAAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGAGTGATGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 90 bp CTGAGCTGTCATCACTCCTACAGTGGTCATGGTCTGATGGTCCCATaGTCTGATGGTCCCAATCTATTTATCCATCCATCCAACATTTAT +
Preference number: 1 (lower is better)
Translates to: LSCHHSYSGHGLMVP*SDGPNLFIHPSNIY
Trigger: ATAAATGTTGGATGGATGGATAAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGAGTGATGACAGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACCTGGGGGTCCCCTCTaGCAGCCACCCTATGTTCAG +
Preference number: 2 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTPGGPL*QPPYVQ
Trigger: CTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGGAGGCTTTGGGTGTGTaGAGTGATTCCAGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LLPSLHSLWQSCQATLEAEALGV*SDSSAF
Trigger: GAAGGCACTGGAATCACTCCACACACCCAAAGCCTC...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGACTGAGTGGGGACGCTaGGCTGTCATCACTCCTACA +
Preference number: 2 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRTEWGR*AVITPT
Trigger: TGTAGGAGTGATGACAGCTCAGCGTCCCCACTCAGT...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGGATGGAGGATCTCCATaGCTGGAAGAGTCCATTCAC +
Preference number: 2 (lower is better)
Translates to: LLPSLHSLWQSCQATLEADGGSP*LEESIH
Trigger: GTGAATGGACTCTTCCAGGCATGGAGATCCTCCATC...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGATTCCTTCAGGCTCCTaGGGGTCCCCTCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMIPSGS*GSPLPA
Trigger: GGCTGGCAGAGGGGACCCCCAGGAGCCTGAAGGAAT...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGGGTCTGATGGTCCCATaGTCTGATGGTCCCAATCTA +
Preference number: 2 (lower is better)
Translates to: LLPSLHSLWQSCQATLEAGLMVP*SDGPNL
Trigger: TAGATTGGGACCATCAGACCATGGGACCATCAGACC...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGGCTCATGGGCATCTCTaGGTAAGAGAATCAGAGCCT +
Preference number: 2 (lower is better)
Translates to: LLPSLHSLWQSCQATLEAAHGHL*VRESEP
Trigger: AGGCTCTGATTCTCTTACCCAGAGATGCCCATGAGC...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCTCCTACAGTGGTCATaGTCTGATGGTCCCATGGTC +
Preference number: 2 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRLLQWS*SDGPMV
Trigger: GACCATGGGACCATCAGACCATGACCACTGTAGGAG...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGTCTGGCTTTCCATTCTaGCATCCCAGAGTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRSGFPF*HPRVEA
Trigger: AGCCTCCACTCTGGGATGCCAGAATGGAAAGCCAGA...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGGATGGTCCCATGGTCTaGTGGTCCCAATCTATTTAT +
Preference number: 2 (lower is better)
Translates to: LLPSLHSLWQSCQATLEADGPMV*WSQSIY
Trigger: ATAAATAGATTGGGACCATCAGACCATGGGACCATC...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACAGTTTGCCTGCCTAGATaGTCTCCCCTTCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTVCLPR*SPLLHP
Trigger: TGGATGGAGAAGGGGAGAGCATCTAGGCAGGCAAAC...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGACACCCCGGCATCTGTaGTCACTCACAGGCAGACTG +
Preference number: 2 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMTPRHL*SLTGRL
Trigger: CAGTCTGCCTGTGAGTGAGCACAGATGCCGGGGTGT...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGACACCCCGGCATCTGTaGTCACTCACAGGCAGACTG +
Preference number: 2 (lower is better)
Translates to: VGHDIGCLAQETTPANPRTPRHL*SLTGRL
Trigger: CAGTCTGCCTGTGAGTGAGCACAGATGCCGGGGTGT...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGGGTCTGATGGTCCCATaGTCTGATGGTCCCAATCTA +
Preference number: 2 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRGLMVP*SDGPNL
Trigger: TAGATTGGGACCATCAGACCATGGGACCATCAGACC...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGGCTGTGAGATCCAACTaGCTGGAATGTGTCAGGGAT +
Preference number: 2 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRAVRSN*LECVRD
Trigger: ATCCCTGACACATTCCAGCCAGTTGGATCTCACAGC...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATTCTGGCATCCCAGAGTaGAGGCTCTGGGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHSGIPE*RLWEGR
Trigger: TCTGCCCTCCCAGAGCCTCCACTCTGGGATGCCAGA...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CAA 90 bp GGGCGACAGGTAGGCAGACTCCTGAGAACCAGAAGTCCAGAGGCTTaGGGTGTGTGGAGTGATTCCAGTGCCTTCAGATTCCTTCAGGCT +
Preference number: 2 (lower is better)
Translates to: GRQVGRLLRTRSPEA*GVWSDSSAFRFLQA
Trigger: AGCCTGAAGGAATCTGAAGGCACTGGAATCACTCCACACACCCAAAGCCTCTGGACTTCTGGTTCTCAGGAGTCTGCCTACCTGTCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGACTGAGTGGGGACGCTaGGCTGTCATCACTCCTACA +
Preference number: 2 (lower is better)
Translates to: VGHDIGCLAQETTPANPRTEWGR*AVITPT
Trigger: TGTAGGAGTGATGACAGCTCAGCGTCCCCACTCAGT...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGGCAATTGATGGGCCCTaGGGTCAGGATCCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: VGHDIGCLAQETTPANPRAIDGP*GQDPWF
Trigger: AAACCAGGGATCCTGACCGCAGGGCCCATCAATTGC...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACAAGCCTGTGTCTGCAGTaGGTCGGTTTAGGAACTCAA +
Preference number: 2 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTSLCLQ*VGLGTQ
Trigger: TTGAGTTCCTAAACCGACCCACTGCAGACACAGGCT...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGACAGTGGTCATGGTCTaGTGGTCCCATGGTCTGATG +
Preference number: 2 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMTVVMV*WSHGLM
Trigger: CATCAGACCATGGGACCATCAGACCATGACCACTGT...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp CCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCCTGGACAGTTTCTGGGGAGATTATTTTGTaGTGGGCTTCAGATCCGAGG +
Preference number: 2 (lower is better)
Translates to: PWFLQLHECLPVRPWTVSGEIIL*WASDPR
Trigger: CCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCC...AGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCATTCCTTCAGGCTCCTaGGGGTCCCCTCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: KSPFTNYILNVLGWETRLIPSGS*GSPLPA
Trigger: GGCTGGCAGAGGGGACCCCCAGGAGCCTGAAGGAAT...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGGAGGCTTTGGGTGTGTaGAGTGATTCCAGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: VGHDIGCLAQETTPANPREALGV*SDSSAF
Trigger: GAAGGCACTGGAATCACTCCACACACCCAAAGCCTC...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CAA 90 bp CTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCAATAGGCTaGGGAACCAGCATGGAAGGGTCAAGTGTCATAGAAGAAACCCCC +
Preference number: 2 (lower is better)
Translates to: LSCHHLGHTHIPPIG*GTSMEGSSVIEETP
Trigger: GGGGGTTTCTTCTATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGTATATGATTCCCAGATaGAGGGCCAGGGGACCTTTG +
Preference number: 2 (lower is better)
Translates to: VGHDIGCLAQETTPANPRYMIPR*RARGPL
Trigger: CAAAGGTCCCCTGGCCCTTCATCTGGGAATCATATA...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGTGGATAGCTGTGCTGTaGGATCCAACTGGCTGGAAT +
Preference number: 2 (lower is better)
Translates to: VGHDIGCLAQETTPANPRWIAVL*DPTGWN
Trigger: ATTCCAGCCAGTTGGATCTCACAGCACAGCTATCCA...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATCACTTCCCTTCTGTTTaGCTGCCTAGATGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHHFPSV*LPRCSP
Trigger: GGGAGAGCATCTAGGCAGGCAAACAGAAGGGAAGTG...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCACACTTCCCTTCTGTTTaGCTGCCTAGATGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPHFPSV*LPRCSP
Trigger: GGGAGAGCATCTAGGCAGGCAAACAGAAGGGAAGTG...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACATACTCCCAGACTTCATaGCAGAGGTTTAACTCCACT +
Preference number: 2 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTYSQTS*QRFNST
Trigger: AGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTA...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGAGACACACCCCACAGTaGAAATCACACACACACACA +
Preference number: 2 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMRHTPQ*KSHTHT
Trigger: TGTGTGTGTGTGTGATTTTCACTGTGGGGTGTGTCT...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATCAGCTTCTAGGCCATTaGGTGGGGCATGATATTGGA +
Preference number: 2 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHQLLGH*VGHDIG
Trigger: TCCAATATCATGCCCCACTCAATGGCCTAGAAGCTG...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCCCTGGGGGTCCCCTCTaGCAGCCACCCTATGTTCAG +
Preference number: 2 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCPGGPL*QPPYVQ
Trigger: CTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCGTTTGCCTGCCTAGATaGTCTCCCCTTCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLVCLPR*SPLLHP
Trigger: TGGATGGAGAAGGGGAGAGCATCTAGGCAGGCAAAC...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTTCCCTTCTGTTTGCCTaGCTAGATGCTCTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLSLLFA*LDALPF
Trigger: GAAGGGGAGAGCATCTAGGCAGGCAAACAGAAGGGA...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATTCCCTTCTGTTTGCCTaGCTAGATGCTCTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHSLLFA*LDALPF
Trigger: GAAGGGGAGAGCATCTAGGCAGGCAAACAGAAGGGA...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGCACTCACAGGCAGACTaGTCACTTTCTTGCACCTTT +
Preference number: 2 (lower is better)
Translates to: VGHDIGCLAQETTPANPRHSQAD*SLSCTF
Trigger: AAAGGTGCAAGAAAGTGAGCAGTCTGCCTGTGAGTG...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCATTCCTTCAGGCTCCTaGGGGTCCCCTCTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCIPSGS*GSPLPA
Trigger: GGCTGGCAGAGGGGACCCCCAGGAGCCTGAAGGAAT...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGGTGCACTTACACACATaGTCAGATACACTGAGTGGG +
Preference number: 2 (lower is better)
Translates to: VGHDIGCLAQETTPANPRVHLHT*SDTLSG
Trigger: CCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGCAGGTACTTTTAGGATaGAGGATCTCCATGCCTGGA +
Preference number: 2 (lower is better)
Translates to: VGHDIGCLAQETTPANPRQVLLG*RISMPG
Trigger: TCCAGGCATGGAGATCCTCCATCCTAAAAGTACCTG...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CAA 90 bp GTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTaGTGCTGGGCTTCAGATCCGAGGAGCCAGGTCTGTAGATTCTGG +
Preference number: 2 (lower is better)
Translates to: VPNSSSTSSLDGEII*CWASDPRSQVCRFW
Trigger: CCAGAATCTACAGACCTGGCTCCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CAA 90 bp GGGAGACAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTaGGACGGGGAGATTATTTTGTGCTGGGCTTCAGATCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: GRQDSKVPNSSSTSS*DGEIILCWASDPRS
Trigger: GCTCCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTGTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCATTTGGGTGTGTGGAGTaGTTCCAGTGCCTTCAGATT +
Preference number: 2 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPFGCVE*FQCLQI
Trigger: AATCTGAAGGCACTGGAATCACTCCACACACCCAAA...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATTTTGGGTGTGTGGAGTaGTTCCAGTGCCTTCAGATT +
Preference number: 2 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHFGCVE*FQCLQI
Trigger: AATCTGAAGGCACTGGAATCACTCCACACACCCAAA...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGACAGTGGTCATGGTCTaGTGGTCCCATGGTCTGATG +
Preference number: 2 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMTVVMV*WSHGLM
Trigger: CATCAGACCATGGGACCATCAGACCATGACCACTGT...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACAGTGGTCATGGTCTaGTGGTCCCATGGTCTGATG +
Preference number: 2 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKTVVMV*WSHGLM
Trigger: CATCAGACCATGGGACCATCAGACCATGACCACTGT...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGACATGGTCAGATACACTaGGTGGGGACGCTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRHGQIH*VGTLSC
Trigger: ACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATG...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGCACTTCCCTTCTGTTTaGCTGCCTAGATGCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKHFPSV*LPRCSP
Trigger: GGGAGAGCATCTAGGCAGGCAAACAGAAGGGAAGTG...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTGAAGTCCAGAGGCTTTaGGTGTGTGGAGTGATTCCA +
Preference number: 2 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLEVQRL*VCGVIP
Trigger: TGGAATCACTCCACACACCCAAAGCCTCTGGACTTC...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCGGACCTTTGTGTACTTaGGGGATCATCTCCAACCCC +
Preference number: 2 (lower is better)
Translates to: KSPFTNYILNVLGWETRLGPLCT*GIISNP
Trigger: GGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCC...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTTTCTTGCACCTTTCTTaGCATCACCTCGGCCACACC +
Preference number: 2 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFFLHLS*HHLGHT
Trigger: GGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAA...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGGGGGAGATTATTTTGTaGTGGGCTTCAGATCCGAGG +
Preference number: 2 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMGEIIL*WASDPR
Trigger: CCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCC...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGACTCCTACAGTGGTCATaGTCTGATGGTCCCATGGTC +
Preference number: 2 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRLLQWS*SDGPMV
Trigger: GACCATGGGACCATCAGACCATGACCACTGTAGGAG...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATCAGGTACTTTTAGGATaGAGGATCTCCATGCCTGGA +
Preference number: 2 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHQVLLG*RISMPG
Trigger: TCCAGGCATGGAGATCCTCCATCCTAAAAGTACCTG...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGAGACACACCCCACAGTaGAAATCACACACACACACA +
Preference number: 2 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMRHTPQ*KSHTHT
Trigger: TGTGTGTGTGTGTGATTTTCACTGTGGGGTGTGTCT...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCCATGGTCAGATACACTaGGTGGGGACGCTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCHGQIH*VGTLSC
Trigger: ACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATG...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCATACTCCCAGACTTCATaGCAGAGGTTTAACTCCACT +
Preference number: 2 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSYSQTS*QRFNST
Trigger: AGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTA...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCGAAGTCCAGAGGCTTTaGGTGTGTGGAGTGATTCCA +
Preference number: 2 (lower is better)
Translates to: KSPFTNYILNVLGWETRLEVQRL*VCGVIP
Trigger: TGGAATCACTCCACACACCCAAAGCCTCTGGACTTC...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATAAGCCTGTGTCTGCAGTaGGTCGGTTTAGGAACTCAA +
Preference number: 2 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIISLCLQ*VGLGTQ
Trigger: TTGAGTTCCTAAACCGACCCACTGCAGACACAGGCT...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGTTCCACAAGCTCCTTaGACGGGGAGATTATTTTGT +
Preference number: 2 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHVPQAP*TGRLFC
Trigger: ACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAAC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTGTTTCTCCAGCTCCATaGATGCCTCCCTGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPVSPAP*MPPCEA
Trigger: GGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAAC...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCCACTCACAGGCAGACTaGTCACTTTCTTGCACCTTT +
Preference number: 2 (lower is better)
Translates to: KSPFTNYILNVLGWETRLHSQAD*SLSCTF
Trigger: AAAGGTGCAAGAAAGTGAGCAGTCTGCCTGTGAGTG...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTACACCCCGGCATCTGTaGTCACTCACAGGCAGACTG +
Preference number: 2 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCTPRHL*SLTGRL
Trigger: CAGTCTGCCTGTGAGTGAGCACAGATGCCGGGGTGT...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATACAACCACATTTTTGTaGACTTACACACATGGTCAG +
Preference number: 2 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHTTTFL*TYTHGQ
Trigger: CTGACCATGTGTGTAAGTGCACAAAAATGTGGTTGT...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp CAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTGTGCACTTACACACATaGTCAGATACACTGAGTGGG +
Preference number: 2 (lower is better)
Translates to: QDSKVPNSSSTSSLDGEIVHLHT*SDTLSG
Trigger: CCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC...AATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATAGATGGTCCCATGGTCTaGTGGTCCCAATCTATTTAT +
Preference number: 2 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIDGPMV*WSQSIY
Trigger: ATAAATAGATTGGGACCATCAGACCATGGGACCATC...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCTATATGATTCCCAGATaGAGGGCCAGGGGACCTTTG +
Preference number: 2 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCYMIPR*RARGPL
Trigger: CAAAGGTCCCCTGGCCCTTCATCTGGGAATCATATA...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTGTTTGCCTGCCTAGATaGTCTCCCCTTCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: KQLCPREGLLNPLSMCISVCLPR*SPLLHP
Trigger: TGGATGGAGAAGGGGAGAGCATCTAGGCAGGCAAAC...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp CAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTTACTCCCAGACTTCATaGCAGAGGTTTAACTCCACT +
Preference number: 2 (lower is better)
Translates to: QDSKVPNSSSTSSLDGEIYSQTS*QRFNST
Trigger: AGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTA...AATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCAGCCTGTGTCTGCAGTaGGTCGGTTTAGGAACTCAA +
Preference number: 2 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCSLCLQ*VGLGTQ
Trigger: TTGAGTTCCTAAACCGACCCACTGCAGACACAGGCT...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCTTCTCAGGTTCCCTCTaGCTTTCCATTCTGGCATCC +
Preference number: 2 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCFSGSL*LSILAS
Trigger: GGATGCCAGAATGGAAAGCCAGAGGGAACCTGAGAA...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTTCTTGCACCTTTCTTaGCATCACCTCGGCCACACC +
Preference number: 2 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCFLHLS*HHLGHT
Trigger: GGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAA...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTTGTGTCAGGGATGGCTaGGAAGGAGGCAGGTACTTT +
Preference number: 2 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPCVRDG*EGGRYF
Trigger: AAAGTACCTGCCTCCTTCCCAGCCATCCCTGACACA...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CAA 90 bp AGCTCTCCAGGACTCATGCTGATGGAAGAGTGTAGCCTGGAAGGTTaGAATGTAGAGCAACATCTACAACCACATTTTTGTGCACTTACA +
Preference number: 2 (lower is better)
Translates to: SSPGLMLMEECSLEG*NVEQHLQPHFCALT
Trigger: TGTAAGTGCACAAAAATGTGGTTGTAGATGTTGCTCTACATTCAAACCTTCCAGGCTACACTCTTCCATCAGCATGAGTCCTGGAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTGATGGAGGATCTCCATaGCTGGAAGAGTCCATTCAC +
Preference number: 2 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPDGGSP*LEESIH
Trigger: GTGAATGGACTCTTCCAGGCATGGAGATCCTCCATC...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTGAAGTCCAGAGGCTTTaGGTGTGTGGAGTGATTCCA +
Preference number: 2 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPEVQRL*VCGVIP
Trigger: TGGAATCACTCCACACACCCAAAGCCTCTGGACTTC...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR TCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTTTTGGGTGTGTGGAGTaGTTCCAGTGCCTTCAGATT +
Preference number: 2 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPFGCVE*FQCLQI
Trigger: AATCTGAAGGCACTGGAATCACTCCACACACCCAAA...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CAA 90 bp ACATGTTGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTaGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATC +
Preference number: 2 (lower is better)
Translates to: TCWPQVRNYCSKQKQ*CPREGLLNPLSMCI
Trigger: GATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCAACATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR GCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCACAACCACATTTTTGTaGACTTACACACATGGTCAG +
Preference number: 2 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCTTTFL*TYTHGQ
Trigger: CTGACCATGTGTGTAAGTGCACAAAAATGTGGTTGT...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 72 bp TGGGAAAAGCTCCTACTACCCTCGCTCCACAGCCTCTaGCAAAGCTGCCAGGCCACTCTGGAGGCGGCAGAG +
Preference number: 3 (lower is better)
Translates to: WEKLLLPSLHSL*QSCQATLEAAE
Trigger: CTCTGCCGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAGGAGCTTTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR TCA 72 bp GCCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATaGATGCCTCCCTGTGAGGCCCTGGACAGTTTCTCC +
Preference number: 3 (lower is better)
Translates to: ALRSGSLVSPAP*MPPCEALDSFS
Trigger: GGAGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 72 bp CAGAGTGGAGGCTCTGGGAGGGCAGAACCCTGTTCCTaGCTCAGTTTCCCCACCTGTGGGTCTGCGTATAGG +
Preference number: 3 (lower is better)
Translates to: QSGGSGRAEPCS*LSFPTCGSAYR
Trigger: CCTATACGCAGACCCACAGGTGGGGAAACTGAGGCAGGAACAGGGTTCTGCCCTCCCAGAGCCTCCACTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 72 bp AGGTTCCCTCTGGCTTTCCATTCTGGCATCCCAGAGTaGAGGCTCTGGGAGGGCAGAACCCTGTTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: RFPLAFHSGIPE*RLWEGRTLFLP
Trigger: AGGCAGGAACAGGGTTCTGCCCTCCCAGAGCCTCCACTCTGGGATGCCAGAATGGAAAGCCAGAGGGAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 72 bp GCCTTCAGATTCCTTCAGGCTCCTGGGGGTCCCCTCTaGCAGCCACCCTATGTTCAGATCGTCCATCTGATG +
Preference number: 3 (lower is better)
Translates to: AFRFLQAPGGPL*QPPYVQIVHLM
Trigger: CATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGAGCCTGAAGGAATCTGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 72 bp TGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATaGCTCCCTGTGAGGCCCTGGACAGTTTCTCCCTCT +
Preference number: 3 (lower is better)
Translates to: CGQDPWFLQLHE*LPVRPWTVSPS
Trigger: AGAGGGAGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGTTTCTTGCACCTTTCTaGCCATCACCTCGGCCACAC +
Preference number: 3 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMFLAPF*PSPRPH
Trigger: GTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAA...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR TCA 72 bp GTGAACATCCCAGTCTCCCTGTGGATAGCTGTGCTGTaGGATCCAACTGGCTGGAATGTGTCAGGGATGGCT +
Preference number: 3 (lower is better)
Translates to: VNIPVSLWIAVL*DPTGWNVSGMA
Trigger: AGCCATCCCTGACACATTCCAGCCAGTTGGATCTCACAGCACAGCTATCCACAGGGAGACTGGGATGTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 72 bp CACAGCCTAGAATCCATCATGCAAGTCACAGCACTCTaGGAAAAGCTCCTACTACCCTCGCTCCACAGCCTC +
Preference number: 3 (lower is better)
Translates to: HSLESIMQVTAL*EKLLLPSLHSL
Trigger: GAGGCTGTGGAGCGAGGGTAGTAGGAGCTTTTCCCAGAGTGCTGTGACTTGCATGATGGATTCTAGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGTGTAGCCTGGAAGGTTaGAATGTAGAGCAACATCTA +
Preference number: 3 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRCSLEG*NVEQHL
Trigger: TAGATGTTGCTCTACATTCAAACCTTCCAGGCTACA...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATGGGACCTTTGTGTACTaGAGGGATCATCTCCAACCC +
Preference number: 3 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHGTFVY*RDHLQP
Trigger: GGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCC...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 72 bp CTCACAGGCAGACTGCTCACTTTCTTGCACCTTTCTTaGCATCACCTCGGCCACACCCACATTCCTCCAATA +
Preference number: 3 (lower is better)
Translates to: LTGRLLTFLHLS*HHLGHTHIPPI
Trigger: TATTGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAGCAGTCTGCCTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 72 bp AGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTaGTGGGCTTCAGATCCGAGGAGCCAGGTCTGTAGA +
Preference number: 3 (lower is better)
Translates to: SSTSSLDGEIIL*WASDPRSQVCR
Trigger: TCTACAGACCTGGCTCCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 72 bp TCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTaGGCTTCAGATCCGAGGAGCCAGGTCTGTAGATTC +
Preference number: 3 (lower is better)
Translates to: STSSLDGEIILC*ASDPRSQVCRF
Trigger: GAATCTACAGACCTGGCTCCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCAATTCCTCCAATAGGCTaGGGAACCAGCATGGAAGGG +
Preference number: 3 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSIPPIG*GTSMEG
Trigger: CCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAAT...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGTCTACAACCACATTTTaGTGCACTTACACACATGGT +
Preference number: 3 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRSTTTF*CTYTHG
Trigger: ACCATGTGTGTAAGTGCACAAAAATGTGGTTGTAGA...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGACGGGGAGATTATTTaGTGCTGGGCTTCAGATCCG +
Preference number: 3 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHDGEII*CWASDP
Trigger: CGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 72 bp AAGAAACCCCCTAGCCTACCCTACTCCCAGACTTCATaGCAGAGGTTTAACTCCACTTCCCTTCTGTTTGCC +
Preference number: 3 (lower is better)
Translates to: KKPPSLPYSQTS*QRFNSTSLLFA
Trigger: GGCAAACAGAAGGGAAGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp CCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCCTGGACAGTTTCTTCTACAACCACATTTTaGTGCACTTACACACATGGT +
Preference number: 3 (lower is better)
Translates to: PWFLQLHECLPVRPWTVSSTTTF*CTYTHG
Trigger: ACCATGTGTGTAAGTGCACAAAAATGTGGTTGTAGA...AGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR TCA 72 bp CAGGTCTGTAGATTCTGGGAGCTAGAGTGGAGTATATaGTTCCCAGATGAAGGGCCAGGGGACCTTTGTGTA +
Preference number: 3 (lower is better)
Translates to: QVCRFWELEWSI*FPDEGPGDLCV
Trigger: TACACAAAGGTCCCCTGGCCCTTCATCTGGGAATCATATACTCCACTCTAGCTCCCAGAATCTACAGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 72 bp ATCCATCCATCCAACATTTATGGAAGGCCTACTATGTaGCAAGGAGGGGTAAGGCAGCTAGCTCTCACAGAC +
Preference number: 3 (lower is better)
Translates to: IHPSNIYGRPTM*QGGVRQLALTD
Trigger: GTCTGTGAGAGCTAGCTGCCTTACCCCTCCTTGGCACATAGTAGGCCTTCCATAAATGTTGGATGGATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR GCA 72 bp TTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTaGGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAA +
Preference number: 3 (lower is better)
Translates to: FHVYLYVAIDGP*GQDPWFLQLHE
Trigger: TTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGGCCCATCAATTGCTACATAGAGATACACATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCATTTCTTGCACCTTTCTaGCCATCACCTCGGCCACAC +
Preference number: 3 (lower is better)
Translates to: NSSSTSSLDGEIILCWASFLAPF*PSPRPH
Trigger: GTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAA...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGTCTACAACCACATTTTaGTGCACTTACACACATGGT +
Preference number: 3 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMSTTTF*CTYTHG
Trigger: ACCATGTGTGTAAGTGCACAAAAATGTGGTTGTAGA...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 72 bp CATCACTCCTACAGTGGTCATGGTCTGATGGTCCCATaGTCTGATGGTCCCAATCTATTTATCCATCCATCC +
Preference number: 3 (lower is better)
Translates to: HHSYSGHGLMVP*SDGPNLFIHPS
Trigger: GGATGGATGGATAAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGAGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 72 bp GAGGCAGGTACTTTTAGGATGGAGGATCTCCATGCCTaGAAGAGTCCATTCACCAACTACATCCTCAATGTG +
Preference number: 3 (lower is better)
Translates to: EAGTFRMEDLHA*KSPFTNYILNV
Trigger: CACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCCTAAAAGTACCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCTTTCTTGCACCTTTCTaGCCATCACCTCGGCCACAC +
Preference number: 3 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCFLAPF*PSPRPH
Trigger: GTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAA...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATTGTAGCCTGGAAGGTTaGAATGTAGAGCAACATCTA +
Preference number: 3 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHCSLEG*NVEQHL
Trigger: TAGATGTTGCTCTACATTCAAACCTTCCAGGCTACA...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGATTCCTCCAATAGGCTaGGGAACCAGCATGGAAGGG +
Preference number: 3 (lower is better)
Translates to: WPQVRNYCSKQKQLCPREIPPIG*GTSMEG
Trigger: CCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAAT...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR-3UTR CAA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGGACCTTTGTGTACTaGAGGGATCATCTCCAACCC +
Preference number: 3 (lower is better)
Translates to: WPQVRNYCSKQKQLCPREGTFVY*RDHLQP
Trigger: GGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCC...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR TCA 72 bp CTCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTaGTGGTCCCAATCTATTTATCCATCCATCCAACAT +
Preference number: 3 (lower is better)
Translates to: LLQWSWSDGPMV*WSQSIYPSIQH
Trigger: ATGTTGGATGGATGGATAAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR TCA 72 bp ACATTTTTGTGCACTTACACACATGGTCAGATACACTaGGTGGGGACGCTGAGCTGTCATCACTCCTACAGT +
Preference number: 3 (lower is better)
Translates to: TFLCTYTHGQIH*VGTLSCHHSYS
Trigger: ACTGTAGGAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCACAAAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 72 bp ACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTaGACGGGGAGATTATTTTGTGCTGGGCTTCAGATC +
Preference number: 3 (lower is better)
Translates to: TPKFPIQVPQAP*TGRLFCAGLQI
Trigger: GATCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 72 bp GGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTaGGATGGGAGACAAGACTCCAAAGTTCCCAATTCA +
Preference number: 3 (lower is better)
Translates to: GRVHSPTTSSMC*DGRQDSKVPNS
Trigger: TGAATTGGGAACTTTGGAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 72 bp AACATCTACAACCACATTTTTGTGCACTTACACACATaGTCAGATACACTGAGTGGGGACGCTGAGCTGTCA +
Preference number: 3 (lower is better)
Translates to: NIYNHIFVHLHT*SDTLSGDAELS
Trigger: TGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCACAAAAATGTGGTTGTAGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CCA 72 bp AGTCCATTCACCAACTACATCCTCAATGTGCTGGGATaGGAGACAAGACTCCAAAGTTCCCAATTCAAGTTC +
Preference number: 3 (lower is better)
Translates to: SPFTNYILNVLG*ETRLQSSQFKF
Trigger: GAACTTGAATTGGGAACTTTGGAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATGGGGCCCGCCGGCCATaGCCGGGCAGCTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHGARRP*PGSWSH
Trigger: GTGAGACCAGCTGCCCGGTCATGGCCGGCGGGCCCC...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCGGAGTGGCAGTGCCTTaGTCGTTCCCTGGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMAGVAVP*SFPGCG
Trigger: TCCGCACCCAGGGAACGAGCAAGGCACTGCCACTCC...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGTGTCATCTCCCTCAGTaGCTCCAGCTCCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEACHLPQ*LQLPLV
Trigger: GACCAGCGGGAGCTGGAGCCACTGAGGGAGATGACA...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGGCTGCCAGGCCACTCTaGAGGCGGCAGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRAARPL*RRQRQK
Trigger: CTTCTGCCTCTGCCGCCTCCAGAGTGGCCTGGCAGC...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGGGTCCAGGCCCGACTTaGGAGAGGCCTGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRGPGPT*ERPVPS
Trigger: AGAAGGCACAGGCCTCTCTCAAGTCGGGCCTGGACC...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCCTGGGGGTCCCCTCTaGCAGCCACCCTATGTTCAG +
Preference number: 4 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGPGGPL*QPPYVQ
Trigger: CTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGAAGAAGTCCCCAGGGTaGGACCCCAGTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEAKKSPG*DPSFQS
Trigger: GCTCTGGAAACTGGGGTCCCACCCTGGGGACTTCTT...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS-3UTR CCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCTCTGGCATCCCAGAGTaGAGGCTCTGGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMASGIPE*RLWEGR
Trigger: TCTGCCCTCCCAGAGCCTCCACTCTGGGATGCCAGA...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACAGCTGCCAGGCCACTCTaGAGGCGGCAGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTAARPL*RRQRQK
Trigger: CTTCTGCCTCTGCCGCCTCCAGAGTGGCCTGGCAGC...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGCTCCAGGACTCATGCTaGTGGAAGAGTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEALQDSC*WKSVAW
Trigger: CCAGGCTACACTCTTCCATCAGCATGAGTCCTGGAG...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCCTGGACAGTTTCTAGCCTCGCAGCATTGTaGTGGGGGCAGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PWFLQLHECLPVRPWTVSSLAAL*WGQGGG
Trigger: CCCTCCACCCTGCCCCCAGCACAATGCTGCGAGGCT...AGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGCTCCCTGTGAGGCCCTaGACAGTTTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEALPVRP*TVSPSS
Trigger: AGAAGAGGGAGAAACTGTCCAGGGCCTCACAGGGAG...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGTCGCTCCACAGCCTCTaGCAAAGCTGCCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRSLHSL*QSCQAT
Trigger: AGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGA...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCACATCTACCACTCCTTaGGCCTGGCCCAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMATSTTP*AWPRIW
Trigger: CCAGATCCTGGGCCAGGCCCAAGGAGTGGTAGATGT...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCCAGCTGGTGCAACGTaGGAGAGCCTCGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGPAGAT*ESLAAL
Trigger: CAATGCTGCGAGGCTCTCCCACGTTGCACCAGCTGG...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACAGGACGAGATGACCTCTaGGAGCCCCCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTGRDDL*EPPWPA
Trigger: AGCTGGCCAAGGGGGCTCCCAGAGGTCATCTCGTCC...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGTCTCTATGTAGCAATTaGTGGGCCCTGCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEASLCSN*WALRSG
Trigger: TCCTGACCGCAGGGCCCATCAATTGCTACATAGAGA...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACTGTCCCCAACACACTaGCTCCGCACAGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTLSPTH*LRTATG
Trigger: CCCAGTTGCTGTGCGGAGTCAGTGTGTTGGGGACAG...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCACACCCCGGCATCTGTaGTCACTCACAGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGTPRHL*SLTGRL
Trigger: CAGTCTGCCTGTGAGTGAGCACAGATGCCGGGGTGT...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCGCAGAACCCTGTTCCTaGCTCAGTTTCCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMAAEPCS*LSFPTC
Trigger: ACAGGTGGGGAAACTGAGGCAGGAACAGGGTTCTGC...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp ACCCACATTCCTCCAATAGGCTTGGGAACCAGCATGGAAGGGTCAAGTGTCATAGCGGCGCAGAGAGCTTaGCGGGCCGCCGGTACTGGC +
Preference number: 4 (lower is better)
Translates to: THIPPIGLGTSMEGSSVIAAQRA*RAAGTG
Trigger: GCCAGTACCGGCGGCCCGCCAAGCTCTCTGCGCCGC...TATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGGAACTCCAACACGCGTaGGAAAGACCTCTTCGTCGT +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEAELQHA*ERPLRR
Trigger: ACGACGAAGAGGTCTTTCCCACGCGTGTTGGAGTTC...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGCTCCTACAGTGGTCATaGTCTGATGGTCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEALLQWS*SDGPMV
Trigger: GACCATGGGACCATCAGACCATGACCACTGTAGGAG...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACATGTAAGCTCAGGGGGTaGGTGCAGGGCAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTCKLRG*VQGRCS
Trigger: AGAGCACCTGCCCTGCACCCACCCCCTGAGCTTACA...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCCCTGAGGCTTGCTTATaGCCAAAGCCTGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMAPEACL*PKPGLD
Trigger: GTCAAGCCCAGGCTTTGGCCATAAGCAAGCCTCAGG...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACAGTTTCTCCAGCTCCATaGATGCCTCCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTVSPAP*MPPCEA
Trigger: GGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAAC...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCTCTCTATGTAGCAATTaGTGGGCCCTGCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMASLCSN*WALRSG
Trigger: TCCTGACCGCAGGGCCCATCAATTGCTACATAGAGA...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGCAGCTTCTAGGCCATTaGGTGGGGCATGATATTGGA +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEAQLLGH*VGHDIG
Trigger: TCCAATATCATGCCCCACTCAATGGCCTAGAAGCTG...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACATCCTTGGCGAACACCTaGTTCAGGCACAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTSLANT*FRHRAM
Trigger: CATGGCCCTGTGCCTGAAGCAGGTGTTCGCCAAGGA...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCGTTTGCCTGCCTAGATaGTCTCCCCTTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMAVCLPR*SPLLHP
Trigger: TGGATGGAGAAGGGGAGAGCATCTAGGCAGGCAAAC...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGGCAGAACCCTGTTCCTaGCTCAGTTTCCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRAEPCS*LSFPTC
Trigger: ACAGGTGGGGAAACTGAGGCAGGAACAGGGTTCTGC...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTGCGGCGCAGAGAGCTTaGCGGGCCGCCGGTACTGGC +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFAAQRA*RAAGTG
Trigger: GCCAGTACCGGCGGCCCGCCAAGCTCTCTGCGCCGC...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACAGGCGGGTCAGGATCTTaGTGCAGACCTGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTGGSGS*CRPAGS
Trigger: ACTTCCAGCAGGTCTGCACCAAGATCCTGACCCGCC...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGGAAGTCCAGAGGCTTTaGGTGTGTGGAGTGATTCCA +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEAEVQRL*VCGVIP
Trigger: TGGAATCACTCCACACACCCAAAGCCTCTGGACTTC...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGTCATCACTCCTACAGTaGTCATGGTCTGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEASSLLQ*SWSDGP
Trigger: GGGACCATCAGACCATGACCACTGTAGGAGTGATGA...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGGCTGTGAGATCCAACTaGCTGGAATGTGTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEAAVRSN*LECVRD
Trigger: ATCCCTGACACATTCCAGCCAGTTGGATCTCACAGC...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCCTGGACAGTTTCTTCTGGCATCCCAGAGTaGAGGCTCTGGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PWFLQLHECLPVRPWTVSSGIPE*RLWEGR
Trigger: TCTGCCCTCCCAGAGCCTCCACTCTGGGATGCCAGA...AGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCTGCGGTCAGGATCCCTaGTTTCTCCAGCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMACGQDP*FLQLHE
Trigger: TTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCA...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATCCAGGCCCAGCTGGCTaGGCCCAAGAGCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHPGPAG*AQELHL
Trigger: CAGATGGAGCTCTTGGGCCCAGCCAGCTGGGCCTGG...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGCAAGTCACAGCACTCTaGGAAAAGCTCCTACTACCC +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEAQVTAL*EKLLLP
Trigger: GGGTAGTAGGAGCTTTTCCCAGAGTGCTGTGACTTG...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTCCTCCCGCTGCCAGCTaGGCGGCTTCTGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLPPAAS*AASECG
Trigger: GCCACACTCAGAAGCCGCCCAGCTGGCAGCGGGAGG...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCTTCGATCCAGTCCATaGGCAATGCCATATAGCGCG +
Preference number: 4 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGLRSSP*AMPYSA
Trigger: CGCGCTATATGGCATTGCTCATGGACTGGATCGAAG...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCTGGGTATGGAGGTACTaGGTAATGGAGTGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGWVWRY*VMECCV
Trigger: CACGCAGCACTCCATTACTCAGTACCTCCATACCCA...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCCTTCTTCCTGATTCCTaGACACGCCCCCACTCTTTT +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMALLPDS*TRPHSF
Trigger: AAAAGAGTGGGGGCGTGTTCAGGAATCAGGAAGAAG...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCGCATGGCCCCCTTTATaGCAGTTAGAAATAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGAWPPL*QLEIGP
Trigger: GGGGCCTATTTCTAACTGTCATAAAGGGGGCCATGC...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCAGGGGCTTGGACGAGATaGCCTCTGGGAGCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSGAWTR*PLGAPL
Trigger: CAAGGGGGCTCCCAGAGGTCATCTCGTCCAAGCCCC...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACCAGTCCATGAGCAATaGCATATAGCGCGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTPVHEQ*HIARRR
Trigger: TCTGCGCCGCGCTATATGGCATTGCTCATGGACTGG...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCGGGTCAGGATCTTGGTaGAGACCTGCTGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGGSGSW*RPAGSS
Trigger: AGAACTTCCAGCAGGTCTGCACCAAGATCCTGACCC...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCACCTGGGGGTCCCCTCTaGCAGCCACCCTATGTTCAG +
Preference number: 4 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPPGGPL*QPPYVQ
Trigger: CTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCTCCCTTCTGTTTGCCTaGCTAGATGCTCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGSLLFA*LDALPF
Trigger: GAAGGGGAGAGCATCTAGGCAGGCAAACAGAAGGGA...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCTTGGTGCAGACCTGCTaGAAGTTCTTAGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMALVQTC*KFLGKG
Trigger: TCCCTTCCCTAAGAACTTCCAGCAGGTCTGCACCAA...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATGGCTCCAGCTCCCGCTaGTCCACCAGACTGAACTCG +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHGSSSR*STRLNS
Trigger: CGAGTTCAGTCTGGTGGACCAGCGGGAGCTGGAGCC...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCCCAGGCCCAGCTGGCTaGGCCCAAGAGCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLPGPAG*AQELHL
Trigger: CAGATGGAGCTCTTGGGCCCAGCCAGCTGGGCCTGG...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGTACCGGGTCCTCTTCTaGCCGTGGGGTCACATTCCC +
Preference number: 4 (lower is better)
Translates to: VGHDIGCLAQETTPANPRYRVLF*PWGHIP
Trigger: GGGAATGTGACCCCACGGCCAGAAGAGGACCCGGTA...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000319928.8
CDS-3UTR CCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCGCACTGGCTCATCAATaGTCTGGTGGAGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMAALAHQ*SGGDRE
Trigger: TTCTCTGTCTCCACCAGACCATTGATGAGCCAGTGC...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTCTCTGGGAGCCCCCTTaGCCAGCTGGTGCAACGTGG +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLLWEPP*PAGATW
Trigger: CCACGTTGCACCAGCTGGCCAAGGGGGCTCCCAGAG...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCTTTCATTGCAGAGCTaGGCCTGGGCTCTAAACAGG +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRLSLQS*AWALNR
Trigger: CCTGTTTAGAGCCCAGGCCCAGCTCTGCAATGAAAG...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGGACAGTAAGACTGGATaGTTCTCAGGTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRDSKTG*FSGSLW
Trigger: CCAGAGGGAACCTGAGAATCATCCAGTCTTACTGTC...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCGTAGCCTCACCACACTaGGCAGGTCCAGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLVASPH*AGPGPT
Trigger: AGTCGGGCCTGGACCTGCGCAGTGTGGTGAGGCTAC...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATGTTGACGTGCGCCTCTaGCCCCATGCTGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHVDVRL*PHAEDA
Trigger: AGCATCCTCAGCATGGGGGCAGAGGCGCACGTCAAC...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGGGGGAGATTATTTTGTaGTGGGCTTCAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRGEIIL*WASDPR
Trigger: CCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCC...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCAAGCTCAGGGGGTGGGTaGAGGGCAGGTGCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPSSGGG*RAGALL
Trigger: TAGAAGAGCACCTGCCCTGCACCCACCCCCTGAGCT...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCAACCTCTGCATCCTCTaGCTGGAATCTAAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMANLCIL*LESKSS
Trigger: TGAGGACTTAGATTCCAGGCAGAGGATGCAGAGGTT...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCTTTGCTCAACCTCTaGATCCTCTGCCTGGAATCT +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRPLLNL*ILCLES
Trigger: AGATTCCAGGCAGAGGATGCAGAGGTTGAGCAAAGG...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCAATTCCTTCAGGCTCCTaGGGGTCCCCTCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSIPSGS*GSPLPA
Trigger: GGCTGGCAGAGGGGACCCCCAGGAGCCTGAAGGAAT...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCGGTCTGATGGTCCCATaGTCTGATGGTCCCAATCTA +
Preference number: 4 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGGLMVP*SDGPNL
Trigger: TAGATTGGGACCATCAGACCATGGGACCATCAGACC...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGGCTCATGGGCATCTCTaGGTAAGAGAATCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRAHGHL*VRESEP
Trigger: AGGCTCTGATTCTCTTACCCAGAGATGCCCATGAGC...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGACATCCTCAATGTGCTaGGATGGGAGACAAGACTCC +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRTSSMC*DGRQDS
Trigger: GGAGTCTTGTCTCCCATCCCAGCACATTGAGGATGT...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACATGTGTCAGGGATGGCTaGGAAGGAGGCAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTCVRDG*EGGRYF
Trigger: AAAGTACCTGCCTCCTTCCCAGCCATCCCTGACACA...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATTCGCTCCACAGCCTCTaGCAAAGCTGCCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHSLHSL*QSCQAT
Trigger: AGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGA...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCATCGCTCCACAGCCTCTaGCAAAGCTGCCAGGCCACT +
Preference number: 4 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPSLHSL*QSCQAT
Trigger: AGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGA...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACTACCACTGGCTTACTaGGTGACCCCTGTATCACCA +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTLPLAY*VTPVSP
Trigger: TGGTGATACAGGGGTCACCCAGTAAGCCAGTGGTAG...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATTTGCAGAGCTGGGCCTaGGCTCTAAACAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHLQSWA*ALNRCP
Trigger: GGGGCACCTGTTTAGAGCCCAGGCCCAGCTCTGCAA...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTGGGGCCCGCCGGCCATaGCCGGGCAGCTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCGARRP*PGSWSH
Trigger: GTGAGACCAGCTGCCCGGTCATGGCCGGCGGGCCCC...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGCTCCAGGACTCATGCTaGTGGAAGAGTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VGHDIGCLAQETTPANPRLQDSC*WKSVAW
Trigger: CCAGGCTACACTCTTCCATCAGCATGAGTCCTGGAG...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCCCAGGGGCTCGGACCTaGGGATACCGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KSPFTNYILNVLGWETRLPGART*GYRVLF
Trigger: GAAGAGGACCCGGTATCCTCAGGTCCGAGCCCCTGG...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319928.8
CDS-3UTR TCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCACCTCTGTCTCTCCCTaGACCACTGCCGTTCCCCGT +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLTSVSP*TTAVPR
Trigger: ACGGGGAACGGCAGTGGTTCAGGGAGAGACAGAGGT...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTGCTCAAAGCGCTGTGTaGCCGGCTCAAAGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLAQSAV*PAQSAS
Trigger: GGAAGCGCTTTGAGCCGGGCACACAGCGCTTTGAGC...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCTTGAGAGAGGCCTGTaGCTTCTTGTACAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRLERGL*LLVQLK
Trigger: TTTGAGCTGTACAAGAAGGCACAGGCCTCTCTCAAG...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGTTGACGTGCGCCTCTaGCCCCATGCTGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHVDVRL*PHAEDA
Trigger: AGCATCCTCAGCATGGGGGCAGAGGCGCACGTCAAC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGCCTGGGGGTCCCCTCTaGCAGCCACCCTATGTTCAG +
Preference number: 4 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKPGGPL*QPPYVQ
Trigger: CTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCCTGGACAGTTTCTTCCCTTCTGTTTGCCTaGCTAGATGCTCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PWFLQLHECLPVRPWTVSSLLFA*LDALPF
Trigger: GAAGGGGAGAGCATCTAGGCAGGCAAACAGAAGGGA...AGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGCACCCCCGGCTTCCCTaGAACCTCAAACCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMHPRLP*NLKPAP
Trigger: GGGAGCTGGTTTGAGGTTGCAGGGAAGCCGGGGGTG...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCCTGGAGTGGCAGTaGCTTGCTCGTTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSLLEWQ*LARSLG
Trigger: ACCCAGGGAACGAGCAAGGCACTGCCACTCCAGGAG...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGCTGGGCTCCCCACATTaGATGGCCCCCTTTATGACA +
Preference number: 4 (lower is better)
Translates to: VGHDIGCLAQETTPANPRLGSPH*MAPFMT
Trigger: TGTCATAAAGGGGGCCATGCAATGTGGGGAGCCCAG...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGACCCTTGGCCAGCTGGTaGAACGTGGGAGAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRPLASW*NVGEPR
Trigger: GCGAGGCTCTCCCACGTTGCACCAGCTGGCCAAGGG...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp CCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCCTGGACAGTTTCTTGGGCTCTAAACAGGTaGCCCTCAGACTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PWFLQLHECLPVRPWTVSWALNR*PSDLLL
Trigger: CAACAGCAAGTCTGAGGGGCACCTGTTTAGAGCCCA...AGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCAAAGAAGTCCCCAGGGTaGGACCCCAGTTTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPKKSPG*DPSFQS
Trigger: GCTCTGGAAACTGGGGTCCCACCCTGGGGACTTCTT...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGGTGCACTTACACACATaGTCAGATACACTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRVHLHT*SDTLSG
Trigger: CCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCAGGTACTTTTAGGATaGAGGATCTCCATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRQVLLG*RISMPG
Trigger: TCCAGGCATGGAGATCCTCCATCCTAAAAGTACCTG...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACATTCTCAGGTTCCCTCTaGCTTTCCATTCTGGCATCC +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTFSGSL*LSILAS
Trigger: GGATGCCAGAATGGAAAGCCAGAGGGAACCTGAGAA...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACAAGTCACAGCACTCTaGGAAAAGCTCCTACTACCC +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTQVTAL*EKLLLP
Trigger: GGGTAGTAGGAGCTTTTCCCAGAGTGCTGTGACTTG...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACCACTCCTTGGGCCTaGCCCAGGATCTGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKTTPWA*PRIWAR
Trigger: TCTGGCCCAGATCCTGGGCCAGGCCCAAGGAGTGGT...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCGCCTTGCTCGTTCCCTaGGTGCGGATCTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLALLVP*VRIWAS
Trigger: AGAAGCCCAGATCCGCACCCAGGGAACGAGCAAGGC...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATACTCCGCACAGCAACTaGGGTGTCCTGACCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHTPHSN*GVLTSE
Trigger: CTCACTGGTCAGGACACCCCAGTTGCTGTGCGGAGT...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TACCCTACTCCCAGACTTCATGCCAGAGGTTTAACTCCACTTCCCTTCTGTTTGGCCCCCTTGGCCAGCTaGTGCAACGTGGGAGAGCCT +
Preference number: 4 (lower is better)
Translates to: YPTPRLHARGLTPLPFCLAPLAS*CNVGEP
Trigger: AGGCTCTCCCACGTTGCACCAGCTGGCCAAGGGGGC...CAAACAGAAGGGAAGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTAGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGCCTCAGACTTGCTGTTaGTCACGAGAGAGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMPQTCC*SRERSQ
Trigger: CTGCGACCTCTCTCGTGACCAACAGCAAGTCTGAGG...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCAAGGCCTTATCATCTaGGCTCTGACTTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRQGLII*ALTSQF
Trigger: GAATTGGGAAGTCAGAGCCCAGATGATAAGGCCTTG...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
3UTR CAA 72 bp GATTCCCAGATGAAGGGCCAGGGGACCTTTGTGTACTaGAGGGATCATCTCCAACCCCCAGGAGGACACGTA +
Preference number: 4 (lower is better)
Translates to: DSQMKGQGTFVY*RDHLQPPGGHV
Trigger: TACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCCTTCATCTGGGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGCTTCGATCCAGTCCATaGGCAATGCCATATAGCGCG +
Preference number: 4 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMLRSSP*AMPYSA
Trigger: CGCGCTATATGGCATTGCTCATGGACTGGATCGAAG...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGTTTCTCCAGCTCCATaGATGCCTCCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHVSPAP*MPPCEA
Trigger: GGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAAC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCCTGGACAGTTTCTCCATTGAGTGGGGCATaGTATTGGATGCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PWFLQLHECLPVRPWTVSPLSGA*YWMLGS
Trigger: TGAGCCAAGCATCCAATATCATGCCCCACTCAATGG...AGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGAAAAACTCACAGATGTaGAAGGTCATCTCATCCATC +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEAKNSQM*KVISSI
Trigger: GATGGATGAGATGACCTTTCACATCTGTGAGTTTTT...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGACAAAGGTCCTTCCTTaGACCCACAAAGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: VGHDIGCLAQETTPANPRTKVLP*THKGRP
Trigger: TGGCCTGCCTTTGTGGGTTCAAGGAAGGACCTTTGT...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATACAGCTGGGCGGCTTCTaGGTGTGGCTGCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIQLGGF*VWLQAL
Trigger: CAGTGCTTGCAGCCACACTCAGAAGCCGCCCAGCTG...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCGTAGCCTCACCACACTaGGCAGGTCCAGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: KSPFTNYILNVLGWETRLVASPH*AGPGPT
Trigger: AGTCGGGCCTGGACCTGCGCAGTGTGGTGAGGCTAC...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTGTAGCCTCACCACACTaGGCAGGTCCAGGCCCGACT +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFVASPH*AGPGPT
Trigger: AGTCGGGCCTGGACCTGCGCAGTGTGGTGAGGCTAC...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACAATCTTGGTGCAGACCTaGTGGAAGTTCTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTILVQT*WKFLGK
Trigger: CTTCCCTAAGAACTTCCAGCAGGTCTGCACCAAGAT...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGTACTCCCAGACTTCATaGCAGAGGTTTAACTCCACT +
Preference number: 4 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRYSQTS*QRFNST
Trigger: AGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTA...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACACTCACAGGCAGACTaGTCACTTTCTTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTHSQAD*SLSCTF
Trigger: AAAGGTGCAAGAAAGTGAGCAGTCTGCCTGTGAGTG...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTACTACCCTCGCTCCACAGCCTCTGGCAAAGCTGCCAGGCCACTCTGGAGGCGACAACCACATTTTTGTaGACTTACACACATGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLPSLHSLWQSCQATLEATTTFL*TYTHGQ
Trigger: CTGACCATGTGTGTAAGTGCACAAAAATGTGGTTGT...CGCCTCCAGAGTGGCCTGGCAGCTTTGCCAGAGGCTGTGGAGCGAGGGTAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATTGGGTGCAGGGCAGGTaGTCTTCTAGCCACAGGGTT +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHWVQGR*SSSHRV
Trigger: AACCCTGTGGCTAGAAGAGCACCTGCCCTGCACCCA...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGGTGCCCCTCAGACTTaGTGTTGGTCACGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHGAPQT*CWSRER
Trigger: CCTCTCTCGTGACCAACAGCAAGTCTGAGGGGCACC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTGCGGCGCAGAGAGCTTaGCGGGCCGCCGGTACTGGC +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCAAQRA*RAAGTG
Trigger: GCCAGTACCGGCGGCCCGCCAAGCTCTCTGCGCCGC...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTCAGACCTGGGCTCAGTaGCAGATCCGCTCTGTCATC +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLQTWAQ*QIRSVI
Trigger: GATGACAGAGCGGATCTGCCACTGAGCCCAGGTCTG...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGAATTCCTTCAGGCTCCTaGGGGTCCCCTCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRIPSGS*GSPLPA
Trigger: GGCTGGCAGAGGGGACCCCCAGGAGCCTGAAGGAAT...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGTGCGGTCAGGATCCCTaGTTTCTCCAGCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: VGHDIGCLAQETTPANPRCGQDP*FLQLHE
Trigger: TTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCA...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGGTCCTCTTCTGGCCGTaGGGTCACATTCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMVLFWP*GHIPSH
Trigger: GTGGCTGGGAATGTGACCCCACGGCCAGAAGAGGAC...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319928.8
CDS-3UTR CCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATATCTGGGCCAGAGGATaGCCCCAGTTTGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHIWARG*PQFEPR
Trigger: TCTGGGTTCAAACTGGGGCCATCCTCTGGCCCAGAT...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGACCCTGGGACAGGATTaGGGAAGGGAGGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMTLGQD*GREGGN
Trigger: GTTCCCACCCTCCCTTCCCCAATCCTGTCCCAGGGT...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCATTCAGAACAAATTTTaGGAGACAGTGATCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGGPLCQPPYVQIVHLMAIQNKF*ETVIRA
Trigger: GGCCCTGATCACTGTCTCCCAAAATTTGTTCTGAAT...GGCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGTCCTCTGACAACAGCTaGAGATCCTTCCCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMSSDNS*RSFPSS
Trigger: GCTTGAGGGGAAGGATCTCCAGCTGTTGTCAGAGGA...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCAACAGTGGTCATGGTCTaGTGGTCCCATGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPTVVMV*WSHGLM
Trigger: CATCAGACCATGGGACCATCAGACCATGACCACTGT...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGTCTGCTTGGGGCAAGTaGTTCCAAAATCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: VGHDIGCLAQETTPANPRSAWGK*FQNPSH
Trigger: GTGTGAGGGATTTTGGAAGCACTTGCCCCAAGCAGA...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS-3UTR GCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATAGCTCAAAGCGCTGTGTaGCCGGCTCAAAGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIAQSAV*PAQSAS
Trigger: GGAAGCGCTTTGAGCCGGGCACACAGCGCTTTGAGC...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACACCCCGGCATCTGTaGTCACTCACAGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKTPRHL*SLTGRL
Trigger: CAGTCTGCCTGTGAGTGAGCACAGATGCCGGGGTGT...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGGATGGAGGATCTCCATaGCTGGAAGAGTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMDGGSP*LEESIH
Trigger: GTGAATGGACTCTTCCAGGCATGGAGATCCTCCATC...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGCAGAACCCTGTTCCTaGCTCAGTTTCCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHAEPCS*LSFPTC
Trigger: ACAGGTGGGGAAACTGAGGCAGGAACAGGGTTCTGC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGCAATTGATGGGCCCTaGGGTCAGGATCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHAIDGP*GQDPWF
Trigger: AAACCAGGGATCCTGACCGCAGGGCCCATCAATTGC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCATCTTATCCCTCCACCTaGCTGACCACACATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPSYPST*LTTHPQ
Trigger: CTGAGGATGTGTGGTCAGGCAGGTGGAGGGATAAGA...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGAAGAGTATAGTCAGATaGACCCAGGAGGGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMKSIVR*TQEGPS
Trigger: AGATGGGCCCTCCTGGGTGCATCTGACTATACTCTT...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGTTGGTGCAGACCTGCTaGAAGTTCTTAGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMLVQTC*KFLGKG
Trigger: TCCCTTCCCTAAGAACTTCCAGCAGGTCTGCACCAA...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TACCCTACTCCCAGACTTCATGCCAGAGGTTTAACTCCACTTCCCTTCTGTTTGTGTCATCTCCCTCAGTaGCTCCAGCTCCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: YPTPRLHARGLTPLPFCLCHLPQ*LQLPLV
Trigger: GACCAGCGGGAGCTGGAGCCACTGAGGGAGATGACA...CAAACAGAAGGGAAGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTAGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGATGTCATCTCCCTCAGTaGCTCCAGCTCCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRCHLPQ*LQLPLV
Trigger: GACCAGCGGGAGCTGGAGCCACTGAGGGAGATGACA...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp ACCCACATTCCTCCAATAGGCTTGGGAACCAGCATGGAAGGGTCAAGTGTCATACAGACCTGGGCTCAGTaGCAGATCCGCTCTGTCATC +
Preference number: 4 (lower is better)
Translates to: THIPPIGLGTSMEGSSVIQTWAQ*QIRSVI
Trigger: GATGACAGAGCGGATCTGCCACTGAGCCCAGGTCTG...TATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAATTCCTTCAGGCTCCTaGGGGTCCCCTCTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASIPSGS*GSPLPA
Trigger: GGCTGGCAGAGGGGACCCCCAGGAGCCTGAAGGAAT...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGGGTCTGATGGTCCCATaGTCTGATGGTCCCAATCTA +
Preference number: 4 (lower is better)
Translates to: VGHDIGCLAQETTPANPRGLMVP*SDGPNL
Trigger: TAGATTGGGACCATCAGACCATGGGACCATCAGACC...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGAGCCTGTGTCTGCAGTaGGTCGGTTTAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMSLCLQ*VGLGTQ
Trigger: TTGAGTTCCTAAACCGACCCACTGCAGACACAGGCT...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGGCTGTGAGATCCAACTaGCTGGAATGTGTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: VGHDIGCLAQETTPANPRAVRSN*LECVRD
Trigger: ATCCCTGACACATTCCAGCCAGTTGGATCTCACAGC...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTTCTGGCATCCCAGAGTaGAGGCTCTGGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFSGIPE*RLWEGR
Trigger: TCTGCCCTCCCAGAGCCTCCACTCTGGGATGCCAGA...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGTTCTCAGGTTCCCTCTaGCTTTCCATTCTGGCATCC +
Preference number: 4 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMFSGSL*LSILAS
Trigger: GGATGCCAGAATGGAAAGCCAGAGGGAACCTGAGAA...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCACCCTGGGTGCGGATCTaGGCTTCTCAAATGAAGACA +
Preference number: 4 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPPWVRI*ASQMKT
Trigger: TGTCTTCATTTGAGAAGCCCAGATCCGCACCCAGGG...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCAAATAGGCCCCCACCCTaGCATTCAGCACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSNRPPP*HSAPCP
Trigger: AGGACAAGGTGCTGAATGCCAGGGTGGGGGCCTATT...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTAGGCGGGGCTCCTaGGCTCCCCACATTGCATGG +
Preference number: 4 (lower is better)
Translates to: QDSKVPNSSSTSSLDGEIIRRGS*APHIAW
Trigger: CCATGCAATGTGGGGAGCCCAGGAGCCCCGCCTAAT...AATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCTGTGGCTGCAAGCACTaGAGGAGGGGGAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCCGCKH*RRGRAA
Trigger: TGCCGCCCTCCCCCTCCTCCAGTGCTTGCAGCCACA...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
3UTR CAA 72 bp CATCACCTCGGCCACACCCACATTCCTCCAATAGGCTaGGGAACCAGCATGGAAGGGTCAAGTGTCATAGAA +
Preference number: 4 (lower is better)
Translates to: HHLGHTHIPPIG*GTSMEGSSVIE
Trigger: TTCTATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGTGTGGCCGAGGTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTTCGATCCAGTCCATaGGCAATGCCATATAGCGCG +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSLRSSP*AMPYSA
Trigger: CGCGCTATATGGCATTGCTCATGGACTGGATCGAAG...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTCCTCTGCCCCCATGCTaGGGATGCTATCGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFPLPPC*GCYRSG
Trigger: ACCACTTCGATAGCATCCTCAGCATGGGGGCAGAGG...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCAACAGTGGTCATGGTCTaGTGGTCCCATGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSTVVMV*WSHGLM
Trigger: CATCAGACCATGGGACCATCAGACCATGACCACTGT...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCAGGACCTTTGTGTACTTaGGGGATCATCTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSGPLCT*GIISNP
Trigger: GGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCC...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTGTTTCTCCAGCTCCATaGATGCCTCCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFVSPAP*MPPCEA
Trigger: GGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAAC...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGAGGATGGCCCCAGTTTaGACCCAGAATCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMRMAPV*TQNPSW
Trigger: CCAGGATGGATTCTGGGTTCAAACTGGGGCCATCCT...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTAGGGTGGGAACCAGGTaGCACCTGGGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLRVGTR*HLGKSK
Trigger: TTTGCTTTTACCCAGGTGTCACCTGGTTCCCACCCT...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATAATTCTGGTTCCTGGCTaGCCTCTGACCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIILVPG*PLTWAL
Trigger: CAGAGCCCAGGTCAGAGGTCAGCCAGGAACCAGAAT...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTCTCCAGCCCCAAATCTaGACAAGCCACTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFLQPQI*TSHWLL
Trigger: GAGGAGCCAGTGGCTTGTTCAGATTTGGGGCTGGAG...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp TACCCTACTCCCAGACTTCATGCCAGAGGTTTAACTCCACTTCCCTTCTGTTTGGGGCGTCGCTTCCTCTaGCAACAGCTGGAGATCCTT +
Preference number: 4 (lower is better)
Translates to: YPTPRLHARGLTPLPFCLGRRFL*QQLEIL
Trigger: AAGGATCTCCAGCTGTTGTCAGAGGAAGCGACGCCC...CAAACAGAAGGGAAGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCCAGGGGCTCGGACCTaGGGATACCCTGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPPGART*GYPARD
Trigger: GTCCCTGGCAGGGTATCCTCAGGTCCGAGCCCCTGG...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp ACCCACATTCCTCCAATAGGCTTGGGAACCAGCATGGAAGGGTCAAGTGTCATACCAGTCCATGAGCAATaGCATATAGCGCGGCGCAGA +
Preference number: 4 (lower is better)
Translates to: THIPPIGLGTSMEGSSVIPVHEQ*HIARRR
Trigger: TCTGCGCCGCGCTATATGGCATTGCTCATGGACTGG...TATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGATCTTGGTGCAGACCTaGTGGAAGTTCTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VGHDIGCLAQETTPANPRILVQT*WKFLGK
Trigger: CTTCCCTAAGAACTTCCAGCAGGTCTGCACCAAGAT...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCGGGTCAGGATCTTGGTaGAGACCTGCTGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLGSGSW*RPAGSS
Trigger: AGAACTTCCAGCAGGTCTGCACCAAGATCCTGACCC...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTCACTTCCCTTCTGTTTaGCTGCCTAGATGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLHFPSV*LPRCSP
Trigger: GGGAGAGCATCTAGGCAGGCAAACAGAAGGGAAGTG...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTTTCTTGCACCTTTCTTaGCATCACCTCGGCCACACC +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLFLHLS*HHLGHT
Trigger: GGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAA...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATGGGGAGATTATTTTGTaGTGGGCTTCAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHGEIIL*WASDPR
Trigger: CCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCC...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCAGATGGAGGATCTCCATaGCTGGAAGAGTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPDGGSP*LEESIH
Trigger: GTGAATGGACTCTTCCAGGCATGGAGATCCTCCATC...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGGCAATTGATGGGCCCTaGGGTCAGGATCCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKAIDGP*GQDPWF
Trigger: AAACCAGGGATCCTGACCGCAGGGCCCATCAATTGC...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGGGGCATGATATTGGATaGTTGGCTCAGGAAACAACC +
Preference number: 4 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMGHDIG*LAQETT
Trigger: GGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCC...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGCATCCTCAGATTGGCTaGTACCTCCTCCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMHPQIG*YLLPQP
Trigger: AGGCTGTGGGAGGAGGTAGCAGCCAATCTGAGGATG...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTGTCGCAGAGGCTCCCTaGAGGCCCACCAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: KQLCPREGLLNPLSMCISVAEAP*RPTSRQ
Trigger: CTGTCTGCTGGTGGGCCTGCAGGGAGCCTCTGCGAC...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTGGCGGGTCAGGATCTTaGTGCAGACCTGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFGGSGS*CRPAGS
Trigger: ACTTCCAGCAGGTCTGCACCAAGATCCTGACCCGCC...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCGGCTCCAGCTCCCGCTaGTCCACCAGACTGAACTCG +
Preference number: 4 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCGSSSR*STRLNS
Trigger: CGAGTTCAGTCTGGTGGACCAGCGGGAGCTGGAGCC...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTCAGACCTGGGCTCAGTaGCAGATCCGCTCTGTCATC +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFQTWAQ*QIRSVI
Trigger: GATGACAGAGCGGATCTGCCACTGAGCCCAGGTCTG...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTGAGGCTTTGGGTGTGTaGAGTGATTCCAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLEALGV*SDSSAF
Trigger: GAAGGCACTGGAATCACTCCACACACCCAAAGCCTC...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCCTCCTACAGTGGTCATaGTCTGATGGTCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLLLQWS*SDGPMV
Trigger: GACCATGGGACCATCAGACCATGACCACTGTAGGAG...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATGCTCATGGGCATCTCTaGGTAAGAGAATCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHAHGHL*VRESEP
Trigger: AGGCTCTGATTCTCTTACCCAGAGATGCCCATGAGC...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTTCTGGCTTTCCATTCTaGCATCCCAGAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLSGFPF*HPRVEA
Trigger: AGCCTCCACTCTGGGATGCCAGAATGGAAAGCCAGA...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATACAACCCAAGGGGCAGTaGGACATGTTGGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIQPKGQ*DMLASG
Trigger: ACCTGAGGCCAACATGTCCCACTGCCCCTTGGGTTG...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGCTGCCAGGCCACTCTaGAGGCGGCAGAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: WPQVRNYCSKQKQLCPREAARPL*RRQRQK
Trigger: CTTCTGCCTCTGCCGCCTCCAGAGTGGCCTGGCAGC...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGGAACTGGGATAAGGTaGGGCTCAGCTCATGACCAA +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHGTGIR*GSAHDQ
Trigger: TTGGTCATGAGCTGAGCCCCACCTTATCCCAGTTCC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCTCTGCATCCTCTGCCTaGAATCTAAGTCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLSASSA*NLSPQP
Trigger: GGGCTGAGGACTTAGATTCCAGGCAGAGGATGCAGA...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTACTGAGTGGGGACGCTaGGCTGTCATCACTCCTACA +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFTEWGR*AVITPT
Trigger: TGTAGGAGTGATGACAGCTCAGCGTCCCCACTCAGT...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATACATGGTCAGATACACTaGGTGGGGACGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIHGQIH*VGTLSC
Trigger: ACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATG...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTCTCCAGGACTCATGCTaGTGGAAGAGTGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QDSKVPNSSSTSSLDGEILQDSC*WKSVAW
Trigger: CCAGGCTACACTCTTCCATCAGCATGAGTCCTGGAG...AATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCTATATGATTCCCAGATaGAGGGCCAGGGGACCTTTG +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLYMIPR*RARGPL
Trigger: CAAAGGTCCCCTGGCCCTTCATCTGGGAATCATATA...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCTGGATAGCTGTGCTGTaGGATCCAACTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLWIAVL*DPTGWN
Trigger: ATTCCAGCCAGTTGGATCTCACAGCACAGCTATCCA...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGGGTATGGAGGTACTaGGTAATGGAGTGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMWVWRY*VMECCV
Trigger: CACGCAGCACTCCATTACTCAGTACCTCCATACCCA...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTGACAGTAAGACTGGATaGTTCTCAGGTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLDSKTG*FSGSLW
Trigger: CCAGAGGGAACCTGAGAATCATCCAGTCTTACTGTC...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGTCTCTATGTAGCAATTaGTGGGCCCTGCGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKSLCSN*WALRSG
Trigger: TCCTGACCGCAGGGCCCATCAATTGCTACATAGAGA...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACCATTGAGTGGGGCATaGTATTGGATGCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSPLSGA*YWMLGS
Trigger: TGAGCCAAGCATCCAATATCATGCCCCACTCAATGG...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATCAGCTTCTAGGCCATTaGGTGGGGCATGATATTGGA +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHQLLGH*VGHDIG
Trigger: TCCAATATCATGCCCCACTCAATGGCCTAGAAGCTG...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCAATGAAGACAGCAGGCTaGCCCTACCTGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPMKTAG*PYLFLI
Trigger: TATCAGAAACAGGTAGGGTCAGCCTGCTGTCTTCAT...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCGCCCCCATTTCCCAGTaGTGGCTATCCTTTCACTCC +
Preference number: 4 (lower is better)
Translates to: KSPFTNYILNVLGWETRLAPISQ*WLSFHS
Trigger: GGAGTGAAAGGATAGCCATCACTGGGAAATGGGGGC...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCGTGGGGCTCAGCTCATaGCCAAGAGTAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLVGLSS*PRVKDH
Trigger: ATGGTCTTTTACTCTTGGTCATGAGCTGAGCCCCAC...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGAGCTGGGGAGCTGTTTaGGACAAAGGTCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKSWGAV*DKGPSL
Trigger: CAAGGAAGGACCTTTGTCTCAAACAGCTCCCCAGCT...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCCCCCTGCCCCTAGACTaGGCACTAAGGCTGAGTATA +
Preference number: 4 (lower is better)
Translates to: KSPFTNYILNVLGWETRLPLPLD*ALRLSI
Trigger: TATACTCAGCCTTAGTGCTCAGTCTAGGGGCAGGGG...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGGGGTCAGGATCTTGGTaGAGACCTGCTGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKGSGSW*RPAGSS
Trigger: AGAACTTCCAGCAGGTCTGCACCAAGATCCTGACCC...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp ACCCACATTCCTCCAATAGGCTTGGGAACCAGCATGGAAGGGTCAAGTGTCATATTCTTGCACCTTTCTTaGCATCACCTCGGCCACACC +
Preference number: 4 (lower is better)
Translates to: THIPPIGLGTSMEGSSVIFLHLS*HHLGHT
Trigger: GGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAA...TATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATCACTCACAGGCAGACTaGTCACTTTCTTGCACCTTT +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHHSQAD*SLSCTF
Trigger: AAAGGTGCAAGAAAGTGAGCAGTCTGCCTGTGAGTG...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGATGGAGGATCTCCATaGCTGGAAGAGTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHDGGSP*LEESIH
Trigger: GTGAATGGACTCTTCCAGGCATGGAGATCCTCCATC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCGGATCGCCTTTCTCCTaGAGGTCCCGCAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCGSPFS*RSRSAC
Trigger: ACAGGCACTGCGGGACCTGCAGGAGAAAGGCGATCC...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319928.8
CDS-3UTR GCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCTGCTCGTTCCCTGGGTaGGGATCTGGGCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: KSPFTNYILNVLGWETRLCSFPG*GSGLLK
Trigger: TTTGAGAAGCCCAGATCCGCACCCAGGGAACGAGCA...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGACCTGAGGATACCCTaGCAGGGACAAGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASDLRIP*QGQGHR
Trigger: CCTATGCCCTTGTCCCTGGCAGGGTATCCTCAGGTC...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGGCGGGTCAGGATCTTaGTGCAGACCTGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASGGSGS*CRPAGS
Trigger: ACTTCCAGCAGGTCTGCACCAAGATCCTGACCCGCC...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTGGCTCCAGCTCCCGCTaGTCCACCAGACTGAACTCG +
Preference number: 4 (lower is better)
Translates to: KQLCPREGLLNPLSMCISGSSSR*STRLNS
Trigger: CGAGTTCAGTCTGGTGGACCAGCGGGAGCTGGAGCC...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGGAGGCTTTGGGTGTGTaGAGTGATTCCAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMEALGV*SDSSAF
Trigger: GAAGGCACTGGAATCACTCCACACACCCAAAGCCTC...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCAGAAGTCCAGAGGCTTTaGGTGTGTGGAGTGATTCCA +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSEVQRL*VCGVIP
Trigger: TGGAATCACTCCACACACCCAAAGCCTCTGGACTTC...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGAAGTCCAGAGGCTTTaGGTGTGTGGAGTGATTCCA +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHEVQRL*VCGVIP
Trigger: TGGAATCACTCCACACACCCAAAGCCTCTGGACTTC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGTGTCAGGGATGGCTaGGAAGGAGGCAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMCVRDG*EGGRYF
Trigger: AAAGTACCTGCCTCCTTCCCAGCCATCCCTGACACA...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTCTCCCTGTGAGGCCCTaGACAGTTTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFLPVRP*TVSPSS
Trigger: AGAAGAGGGAGAAACTGTCCAGGGCCTCACAGGGAG...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATACTCCCTGTGAGGCCCTaGACAGTTTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIILPVRP*TVSPSS
Trigger: AGAAGAGGGAGAAACTGTCCAGGGCCTCACAGGGAG...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGACTTTCACTCCTGGAGTaGCAGTGCCTTGCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRLSLLE*QCLARS
Trigger: GGAACGAGCAAGGCACTGCCACTCCAGGAGTGAAAG...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGAAGAAGAGGAGGGGAGTaGAGGGACAGTGGAAGCATC +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRRRGGE*RDSGSI
Trigger: GATGCTTCCACTGTCCCTCCACTCCCCTCCTCTTCT...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGGCTCATCAATGGTCTaGTGGAGACAGAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHGSSMV*WRQRRG
Trigger: TCCTCTTCTCTGTCTCCACCAGACCATTGATGAGCC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGAAGCAGAACTGGGAACTaGGATAAGGTGGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRSRTGN*DKVGLS
Trigger: GCTGAGCCCCACCTTATCCCAGTTCCCAGTTCTGCT...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTGGTAGAGGCTGCTTTTaGTCATTGCAGTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLGRGCF*SLQSPL
Trigger: GAGTGGAGACTGCAATGACCAAAAGCAGCCTCTACC...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACAACTACTATGTGCCTaGCACTGGGAGGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSQLLCA*HWEVEE
Trigger: CTCTTCTACCTCCCAGTGCCAGGCACATAGTAGTTG...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
3UTR CAA 72 bp ATTTTCCAACCCTCCCCCTATCCCAGAAATCAGCCCTaGCCACAGCCTAGAATCCATCATGCAAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: IFQPSPYPRNQP*PQPRIHHASHS
Trigger: GCTGTGACTTGCATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTGGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTGGTCCAGGCCCGACTTaGGAGAGGCCTGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPGPGPT*ERPVPS
Trigger: AGAAGGCACAGGCCTCTCTCAAGTCGGGCCTGGACC...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTGGTCCAGGCCCGACTTaGGAGAGGCCTGTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCGPGPT*ERPVPS
Trigger: AGAAGGCACAGGCCTCTCTCAAGTCGGGCCTGGACC...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCCCTCTGCCCCCATGCTaGGGATGCTATCGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCPLPPC*GCYRSG
Trigger: ACCACTTCGATAGCATCCTCAGCATGGGGGCAGAGG...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATTTTGGGTGTGTGGAGTaGTTCCAGTGCCTTCAGATT +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHFGCVE*FQCLQI
Trigger: AATCTGAAGGCACTGGAATCACTCCACACACCCAAA...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCAAGACACACCCCACAGTaGAAATCACACACACACACA +
Preference number: 4 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSRHTPQ*KSHTHT
Trigger: TGTGTGTGTGTGTGATTTTCACTGTGGGGTGTGTCT...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGTATATGATTCCCAGATaGAGGGCCAGGGGACCTTTG +
Preference number: 4 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMYMIPR*RARGPL
Trigger: CAAAGGTCCCCTGGCCCTTCATCTGGGAATCATATA...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTCCTGGGCTTGACCTCTaGCGCTGGAGCACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KQLCPREGLLNPLSMCISPGLDL*RWSTVL
Trigger: AAGGACAGTGCTCCAGCGTCAGAGGTCAAGCCCAGG...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCCTTGAGAGAGGCCTGTaGCTTCTTGTACAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLLERGL*LLVQLK
Trigger: TTTGAGCTGTACAAGAAGGCACAGGCCTCTCTCAAG...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATAGTTTGCCTGCCTAGATaGTCTCCCCTTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIVCLPR*SPLLHP
Trigger: TGGATGGAGAAGGGGAGAGCATCTAGGCAGGCAAAC...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTGTTTGCCTGCCTAGATaGTCTCCCCTTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: QDSKVPNSSSTSSLDGEIVCLPR*SPLLHP
Trigger: TGGATGGAGAAGGGGAGAGCATCTAGGCAGGCAAAC...AATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCCACTTCCCTTCTGTTTaGCTGCCTAGATGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KSPFTNYILNVLGWETRLHFPSV*LPRCSP
Trigger: GGGAGAGCATCTAGGCAGGCAAACAGAAGGGAAGTG...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCAGGTTAGAAATTATTaGTCAAAGCAGAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGQVRNY*SKQKQL
Trigger: CAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTG...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGGGCATGATATTGGATaGTTGGCTCAGGAAACAACC +
Preference number: 4 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHGHDIG*LAQETT
Trigger: GGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATAGAACTCCAACACGCGTaGGAAAGACCTCTTCGTCGT +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIELQHA*ERPLRR
Trigger: ACGACGAAGAGGTCTTTCCCACGCGTGTTGGAGTTC...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTGTGCACTTACACACATaGTCAGATACACTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLVHLHT*SDTLSG
Trigger: CCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp ACCCACATTCCTCCAATAGGCTTGGGAACCAGCATGGAAGGGTCAAGTGTCATAAGCCTGTGTCTGCAGTaGGTCGGTTTAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: THIPPIGLGTSMEGSSVISLCLQ*VGLGTQ
Trigger: TTGAGTTCCTAAACCGACCCACTGCAGACACAGGCT...TATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp ACCCACATTCCTCCAATAGGCTTGGGAACCAGCATGGAAGGGTCAAGTGTCATAACATCCTCAATGTGCTaGGATGGGAGACAAGACTCC +
Preference number: 4 (lower is better)
Translates to: THIPPIGLGTSMEGSSVITSSMC*DGRQDS
Trigger: GGAGTCTTGTCTCCCATCCCAGCACATTGAGGATGT...TATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTTGTGTCAGGGATGGCTaGGAAGGAGGCAGGTACTTT +
Preference number: 4 (lower is better)
Translates to: QDSKVPNSSSTSSLDGEICVRDG*EGGRYF
Trigger: AAAGTACCTGCCTCCTTCCCAGCCATCCCTGACACA...AATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATATGCGGTCAGGATCCCTaGTTTCTCCAGCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIICGQDP*FLQLHE
Trigger: TTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCA...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATACACACATCCTCAGATTaGCTGCTACCTCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIHTSSD*LLPPPT
Trigger: TGTGGGAGGAGGTAGCAGCCAATCTGAGGATGTGTG...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCATTGCATTCTGGTTCCTaGCTGACCTCTGACCTGGGC +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASLHSGS*LTSDLG
Trigger: GCCCAGGTCAGAGGTCAGCCAGGAACCAGAATGCAA...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTGAGTGTGTGAGCTACTaGGAAATGCAGACCCATGTA +
Preference number: 4 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLECVSY*EMQTHV
Trigger: TACATGGGTCTGCATTTCCCAGTAGCTCACACACTC...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGCCTCTGCCCCCATGCTaGGGATGCTATCGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: WPQVRNYCSKQKQLCPREPLPPC*GCYRSG
Trigger: ACCACTTCGATAGCATCCTCAGCATGGGGGCAGAGG...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGAGACACACCCCACAGTaGAAATCACACACACACACA +
Preference number: 4 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKRHTPQ*KSHTHT
Trigger: TGTGTGTGTGTGTGATTTTCACTGTGGGGTGTGTCT...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCACTGAGTGGGGACGCTaGGCTGTCATCACTCCTACA +
Preference number: 4 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCTEWGR*AVITPT
Trigger: TGTAGGAGTGATGACAGCTCAGCGTCCCCACTCAGT...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGGACCTTTGTGTACTTaGGGGATCATCTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASGPLCT*GIISNP
Trigger: GGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCC...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTTATATGATTCCCAGATaGAGGGCCAGGGGACCTTTG +
Preference number: 4 (lower is better)
Translates to: QDSKVPNSSSTSSLDGEIYMIPR*RARGPL
Trigger: CAAAGGTCCCCTGGCCCTTCATCTGGGAATCATATA...AATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGATGGATAGCTGTGCTGTaGGATCCAACTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRWIAVL*DPTGWN
Trigger: ATTCCAGCCAGTTGGATCTCACAGCACAGCTATCCA...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCTGGATAGCTGTGCTGTaGGATCCAACTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KSPFTNYILNVLGWETRLWIAVL*DPTGWN
Trigger: ATTCCAGCCAGTTGGATCTCACAGCACAGCTATCCA...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp CAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTGACAGTAAGACTGGATaGTTCTCAGGTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QDSKVPNSSSTSSLDGEIDSKTG*FSGSLW
Trigger: CCAGAGGGAACCTGAGAATCATCCAGTCTTACTGTC...AATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGACCATTGAGTGGGGCATaGTATTGGATGCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRPLSGA*YWMLGS
Trigger: TGAGCCAAGCATCCAATATCATGCCCCACTCAATGG...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TACCCTACTCCCAGACTTCATGCCAGAGGTTTAACTCCACTTCCCTTCTGTTTGCAGCTTCTAGGCCATTaGGTGGGGCATGATATTGGA +
Preference number: 4 (lower is better)
Translates to: YPTPRLHARGLTPLPFCLQLLGH*VGHDIG
Trigger: TCCAATATCATGCCCCACTCAATGGCCTAGAAGCTG...CAAACAGAAGGGAAGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTTCTGCTTGGGGCAAGTaGTTCCAAAATCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: QDSKVPNSSSTSSLDGEISAWGK*FQNPSH
Trigger: GTGTGAGGGATTTTGGAAGCACTTGCCCCAAGCAGA...AATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS-3UTR GCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCCTCCATTTTAAACTCTaGTTGGGGCAAGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLLHFKL*LGQVLP
Trigger: TGGAAGCACTTGCCCCAAGCAGAGTTTAAAATGGAG...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS-3UTR GCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTGCTCAAAGCGCTGTGTaGCCGGCTCAAAGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCAQSAV*PAQSAS
Trigger: GGAAGCGCTTTGAGCCGGGCACACAGCGCTTTGAGC...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTGTTGACGTGCGCCTCTaGCCCCATGCTGAGGATGCT +
Preference number: 4 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPVDVRL*PHAEDA
Trigger: AGCATCCTCAGCATGGGGGCAGAGGCGCACGTCAAC...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACAGGTTAGAAATTATTaGTCAAAGCAGAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTQVRNY*SKQKQL
Trigger: CAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTG...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGACTAGCAACTACTATGTaGCTGGCACTGGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRLATTM*LALGGR
Trigger: TCTACCTCCCAGTGCCAGGCACATAGTAGTTGCTAG...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCACTTTTCTGCTTTCATTaGAGAGCTGGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASLFCFH*RAGPGL
Trigger: GAGCCCAGGCCCAGCTCTGCAATGAAAGCAGAAAAG...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATATTGGTGCAGACCTGCTaGAAGTTCTTAGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIILVQTC*KFLGKG
Trigger: TCCCTTCCCTAAGAACTTCCAGCAGGTCTGCACCAA...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGAGGCTTTGGGTGTGTaGAGTGATTCCAGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASEALGV*SDSSAF
Trigger: GAAGGCACTGGAATCACTCCACACACCCAAAGCCTC...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGAGGTCTGATGGTCCCATaGTCTGATGGTCCCAATCTA +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRGLMVP*SDGPNL
Trigger: TAGATTGGGACCATCAGACCATGGGACCATCAGACC...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TACCCTACTCCCAGACTTCATGCCAGAGGTTTAACTCCACTTCCCTTCTGTTTGTCATCACTCCTACAGTaGTCATGGTCTGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: YPTPRLHARGLTPLPFCLSSLLQ*SWSDGP
Trigger: GGGACCATCAGACCATGACCACTGTAGGAGTGATGA...CAAACAGAAGGGAAGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTAGGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTACATCCTCAATGTGCTaGGATGGGAGACAAGACTCC +
Preference number: 4 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFTSSMC*DGRQDS
Trigger: GGAGTCTTGTCTCCCATCCCAGCACATTGAGGATGT...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCATCTGGCTTTCCATTCTaGCATCCCAGAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASSGFPF*HPRVEA
Trigger: AGCCTCCACTCTGGGATGCCAGAATGGAAAGCCAGA...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCGGCAGTGGGACATGTTaGCCTCAGGTTAGAAATTAT +
Preference number: 4 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLGSGTC*PQVRNY
Trigger: ATAATTTCTAACCTGAGGCCAACATGTCCCACTGCC...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATACAAGTCACAGCACTCTaGGAAAAGCTCCTACTACCC +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIQVTAL*EKLLLP
Trigger: GGGTAGTAGGAGCTTTTCCCAGAGTGCTGTGACTTG...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGGTAAAAGCAAAGGGATaGCACATATTTCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKVKAKG*HIFRGG
Trigger: CCCTCCCCGAAATATGTGCCATCCCTTTGCTTTTAC...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGAGAACCAGGTGACACCTaGGTAAAAGCAAAGGGATGG +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFREPGDT*VKAKGW
Trigger: CCATCCCTTTGCTTTTACCCAGGTGTCACCTGGTTC...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp TACCCTACTCCCAGACTTCATGCCAGAGGTTTAACTCCACTTCCCTTCTGTTTGTTTGGGTGTGTGGAGTaGTTCCAGTGCCTTCAGATT +
Preference number: 4 (lower is better)
Translates to: YPTPRLHARGLTPLPFCLFGCVE*FQCLQI
Trigger: AATCTGAAGGCACTGGAATCACTCCACACACCCAAA...CAAACAGAAGGGAAGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTAGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTCATGGTCAGATACACTaGGTGGGGACGCTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: KQLCPREGLLNPLSMCISHGQIH*VGTLSC
Trigger: ACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATG...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATACCTAAAAAGAGGACTTaGGGAGCCTGTGTCCACATA +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIPKKRT*GACVHI
Trigger: TATGTGGACACAGGCTCCTCAAGTCCTCTTTTTAGG...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATTTATCATCTGGGCTCTaGCTTCCCAATTCATCATTT +
Preference number: 4 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHLSSGL*LPNSSF
Trigger: AAATGATGAATTGGGAAGTCAGAGCCCAGATGATAA...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGACTTGAGAGAGGCCTGTaGCTTCTTGTACAGCTCAAA +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRLERGL*LLVQLK
Trigger: TTTGAGCTGTACAAGAAGGCACAGGCCTCTCTCAAG...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGCCAAACAGCCCAACCTaGTTCCTGTCCCCAACACAC +
Preference number: 4 (lower is better)
Translates to: WPQVRNYCSKQKQLCPREPNSPT*FLSPTH
Trigger: GTGTGTTGGGGACAGGAAGCAGGTTGGGCTGTTTGG...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCTCCTTGGGTAGAGGCTaGTTTTGGTCATTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: KSPFTNYILNVLGWETRLSLGRG*FWSLQS
Trigger: AGACTGCAATGACCAAAAGCAGCCTCTACCCAAGGA...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCCCTACCCTGAGGCTTaGTTATGGCCAAAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPPYPEA*LWPKPG
Trigger: CCCAGGCTTTGGCCATAAGCAAGCCTCAGGGTAGGG...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGGCTTTGTCTCTTTTCTaGTTTCATTGCAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMALSLF*FHCRAG
Trigger: CCCAGCTCTGCAATGAAAGCAGAAAAGAGACAAAGC...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TACCCTACTCCCAGACTTCATGCCAGAGGTTTAACTCCACTTCCCTTCTGTTTGGTGCACTTACACACATaGTCAGATACACTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: YPTPRLHARGLTPLPFCLVHLHT*SDTLSG
Trigger: CCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC...CAAACAGAAGGGAAGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTAGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TACCCTACTCCCAGACTTCATGCCAGAGGTTTAACTCCACTTCCCTTCTGTTTGGAGATTATTTTGTGCTaGGCTTCAGATCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: YPTPRLHARGLTPLPFCLEIILC*ASDPRS
Trigger: GCTCCTCGGATCTGAAGCCCAGCACAAAATAATCTC...CAAACAGAAGGGAAGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTCAACCCAAGGGGCAGTaGGACATGTTGGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCQPKGQ*DMLASG
Trigger: ACCTGAGGCCAACATGTCCCACTGCCCCTTGGGTTG...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCAACCCAAGGGGCAGTaGGACATGTTGGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPQPKGQ*DMLASG
Trigger: ACCTGAGGCCAACATGTCCCACTGCCCCTTGGGTTG...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCCTATCCTTTCACTCCTaGAGTGGCAGTGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCLSFHS*SGSALL
Trigger: GAGCAAGGCACTGCCACTCCAGGAGTGAAAGGATAG...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCTCCACCTTACTCCTGTaGAACTTCAAGGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCSTLLL*NFKAWV
Trigger: GACCCAGGCCTTGAAGTTCCACAGGAGTAAGGTGGA...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR TCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGAGATGGTCCCATGGTCTaGTGGTCCCAATCTATTTAT +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRDGPMV*WSQSIY
Trigger: ATAAATAGATTGGGACCATCAGACCATGGGACCATC...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCGATGGTCCCATGGTCTaGTGGTCCCAATCTATTTAT +
Preference number: 4 (lower is better)
Translates to: KSPFTNYILNVLGWETRLDGPMV*WSQSIY
Trigger: ATAAATAGATTGGGACCATCAGACCATGGGACCATC...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTGGACCTTTGTGTACTTaGGGGATCATCTCCAACCCC +
Preference number: 4 (lower is better)
Translates to: KQLCPREGLLNPLSMCISGPLCT*GIISNP
Trigger: GGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCC...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGTGGGTATGGAGGTACTaGGTAATGGAGTGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: WPQVRNYCSKQKQLCPREWVWRY*VMECCV
Trigger: CACGCAGCACTCCATTACTCAGTACCTCCATACCCA...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTGGGTGTCCTGACCAGTaGGCTAGAGTTCCACCTTAC +
Preference number: 4 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPGCPDQ*ARVPPY
Trigger: GTAAGGTGGAACTCTAGCTCACTGGTCAGGACACCC...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTTCCCTTCTGTTTGCCTaGCTAGATGCTCTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KQLCPREGLLNPLSMCISSLLFA*LDALPF
Trigger: GAAGGGGAGAGCATCTAGGCAGGCAAACAGAAGGGA...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGCAGGTTAGAAATTATTaGTCAAAGCAGAAACAGTTG +
Preference number: 4 (lower is better)
Translates to: VGHDIGCLAQETTPANPRQVRNY*SKQKQL
Trigger: CAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTG...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATAGTTCCACAAGCTCCTTaGACGGGGAGATTATTTTGT +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIVPQAP*TGRLFC
Trigger: ACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAAC...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCACAGGTACTTTTAGGATaGAGGATCTCCATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASQVLLG*RISMPG
Trigger: TCCAGGCATGGAGATCCTCCATCCTAAAAGTACCTG...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGAGGCAGTGGGACATGTTaGCCTCAGGTTAGAAATTAT +
Preference number: 4 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRGSGTC*PQVRNY
Trigger: ATAATTTCTAACCTGAGGCCAACATGTCCCACTGCC...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
3UTR CAA 72 bp GACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTaGGACGGGGAGATTATTTTGTGCTGGGCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: DSKVPNSSSTSS*DGEIILCWASD
Trigger: ATCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCTTTGGGTGTGTGGAGTaGTTCCAGTGCCTTCAGATT +
Preference number: 4 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCFGCVE*FQCLQI
Trigger: AATCTGAAGGCACTGGAATCACTCCACACACCCAAA...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGATGGTCCCATGGTCTaGTGGTCCCAATCTATTTAT +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASDGPMV*WSQSIY
Trigger: ATAAATAGATTGGGACCATCAGACCATGGGACCATC...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATAAAAAGACCATTTTCCTaGACTGGCTCATCAATGGTC +
Preference number: 4 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIKRPFS*TGSSMV
Trigger: GACCATTGATGAGCCAGTGCAGGAAAATGGTCTTTT...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTGCTGCTTTTGGTCATTaGAGTCTCCACTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPAAFGH*SLHSIP
Trigger: GGGGATGGAGTGGAGACTGCAATGACCAAAAGCAGC...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTGAACTCCAACACGCGTaGGAAAGACCTCTTCGTCGT +
Preference number: 4 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPELQHA*ERPLRR
Trigger: ACGACGAAGAGGTCTTTCCCACGCGTGTTGGAGTTC...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTCTCCTACAGTGGTCATaGTCTGATGGTCCCATGGTC +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCLLQWS*SDGPMV
Trigger: GACCATGGGACCATCAGACCATGACCACTGTAGGAG...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGAGCCTGTGTCTGCAGTaGGTCGGTTTAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: WPQVRNYCSKQKQLCPRESLCLQ*VGLGTQ
Trigger: TTGAGTTCCTAAACCGACCCACTGCAGACACAGGCT...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCCTCCATTTTAAACTCTaGTTGGGGCAAGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCLHFKL*LGQVLP
Trigger: TGGAAGCACTTGCCCCAAGCAGAGTTTAAAATGGAG...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS-3UTR GCA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGATCTTGGTGCAGACCTaGTGGAAGTTCTTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: WPQVRNYCSKQKQLCPREILVQT*WKFLGK
Trigger: CTTCCCTAAGAACTTCCAGCAGGTCTGCACCAAGAT...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp CAAGACTCCAAAGTTCCCAATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTACAACCACATTTTTGTaGACTTACACACATGGTCAG +
Preference number: 4 (lower is better)
Translates to: QDSKVPNSSSTSSLDGEITTTFL*TYTHGQ
Trigger: CTGACCATGTGTGTAAGTGCACAAAAATGTGGTTGT...AATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATTGGGAACTTTGGAGTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTGGGGAGATTATTTTGTaGTGGGCTTCAGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCGEIIL*WASDPR
Trigger: CCTCGGATCTGAAGCCCAGCACAAAATAATCTCCCC...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGAGATTATTTTGTGCTaGGCTTCAGATCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: WPQVRNYCSKQKQLCPREEIILC*ASDPRS
Trigger: GCTCCTCGGATCTGAAGCCCAGCACAAAATAATCTC...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCGTTCCACAAGCTCCTTaGACGGGGAGATTATTTTGT +
Preference number: 4 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCVPQAP*TGRLFC
Trigger: ACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAAC...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTGCTGTGAGATCCAACTaGCTGGAATGTGTCAGGGAT +
Preference number: 4 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPAVRSN*LECVRD
Trigger: ATCCCTGACACATTCCAGCCAGTTGGATCTCACAGC...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTTCTCAGGTTCCCTCTaGCTTTCCATTCTGGCATCC +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCFSGSL*LSILAS
Trigger: GGATGCCAGAATGGAAAGCCAGAGGGAACCTGAGAA...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR TCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTAGACACACCCCACAGTaGAAATCACACACACACACA +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCRHTPQ*KSHTHT
Trigger: TGTGTGTGTGTGTGATTTTCACTGTGGGGTGTGTCT...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTTACTCCCAGACTTCATaGCAGAGGTTTAACTCCACT +
Preference number: 4 (lower is better)
Translates to: KQLCPREGLLNPLSMCISYSQTS*QRFNST
Trigger: AGTGGAGTTAAACCTCTGGCATGAAGTCTGGGAGTA...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTCCACTCTTTTGCCTCTaGATGTTTTCTTATCCCTCC +
Preference number: 4 (lower is better)
Translates to: KQLCPREGLLNPLSMCISPLFCL*MFSYPS
Trigger: GGAGGGATAAGAAAACATGCAGAGGCAAAAGAGTGG...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTGTTCCACAAGCTCCTTaGACGGGGAGATTATTTTGT +
Preference number: 4 (lower is better)
Translates to: KQLCPREGLLNPLSMCISVPQAP*TGRLFC
Trigger: ACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAAC...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTCTATGTGCCTGGCACTaGGAGGTAGAAGAGTATAGT +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCLCAWH*EVEEYS
Trigger: ACTATACTCTTCTACCTCCCAGTGCCAGGCACATAG...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
3UTR CAA 72 bp GGACTCATGCTGATGGAAGAGTGTAGCCTGGAAGGTTaGAATGTAGAGCAACATCTACAACCACATTTTTGT +
Preference number: 4 (lower is better)
Translates to: GLMLMEECSLEG*NVEQHLQPHFC
Trigger: ACAAAAATGTGGTTGTAGATGTTGCTCTACATTCAAACCTTCCAGGCTACACTCTTCCATCAGCATGAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR GCA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCATTTCTGCGCTTCATTTaGCATCTCCATTTTAAACTC +
Preference number: 4 (lower is better)
Translates to: NSSSTSSLDGEIILCWASFLRFI*HLHFKL
Trigger: GAGTTTAAAATGGAGATGGCAAATGAAGCGCAGAAA...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS-3UTR CCA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTGGCAGTGGGACATGTTaGCCTCAGGTTAGAAATTAT +
Preference number: 4 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPGSGTC*PQVRNY
Trigger: ATAATTTCTAACCTGAGGCCAACATGTCCCACTGCC...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTGGAACTTCAAGGCCTaGGTCTCTTTCCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCWNFKA*VSFQEN
Trigger: ATTTTCCTGGAAAGAGACCCAGGCCTTGAAGTTCCA...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CCA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGAGGGGTATTACTTCTaGCAAGAAGTCAAACTAGCT +
Preference number: 4 (lower is better)
Translates to: WPQVRNYCSKQKQLCPREEGYYF*QEVKLA
Trigger: AGCTAGTTTGACTTCTTGCCAGAAGTAATACCCCTC...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR GCA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTACAGTCCTCCCATCTTaGTTTGTCTCTTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCTVLPS*FVSFLL
Trigger: AAGCAGAAAAGAGACAAAGCAAGATGGGAGGACTGT...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 90 bp GCAGGTCCCGCAGTGCCTGTTCTCTCTCCTGTCAGCCTGTCCGTCTaGCTGTCCTGCCGGCCGCGGCTGCCCTCCTGCCCCGGGCGACGC +
Preference number: 5 (lower is better)
Translates to: AGPAVPVLSPVSLSV*LSCRPRLPSCPGRR
Trigger: GCGTCGCCCGGGGCAGGAGGGCAGCCGCGGCCGGCAGGACAGGCAGACGGACAGGCTGACAGGAGAGAGAACAGGCACTGCGGGACCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319928.8
CDS GCA 90 bp CTCTCCTCGCGGCGCGCAGCCACCCACGCCCACCCCCGGCTTCCCTaGAACCTCAAACCAGCTCCCAGGGCCAGGAAGGTCGTAGGACCC +
Preference number: 5 (lower is better)
Translates to: LSSRRAATHAHPRLP*NLKPAPRARKVVGP
Trigger: GGGTCCTACGACCTTCCTGGCCCTGGGAGCTGGTTTGAGGTTGCAGGGAAGCCGGGGGTGGGCGTGGGTGGCTGCGCGCCGCGAGGAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CCA 90 bp CCCTGCAGGCCCACCAGCAGACAGGGGCTTGGACGAGATGACCTCTaGGAGCCCCCTTGGCCAGCTGGTGCAACGTGGGAGAGCCTCGCA +
Preference number: 5 (lower is better)
Translates to: PCRPTSRQGLGRDDL*EPPWPAGATWESLA
Trigger: TGCGAGGCTCTCCCACGTTGCACCAGCTGGCCAAGGGGGCTCCCAGAGGTCATCTCGTCCAAGCCCCTGTCTGCTGGTGGGCCTGCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCGCGGCGCAGAGAGCTaGGCGGGCCGCCGGTACTGG +
Preference number: 5 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGRGAES*AGRRYW
Trigger: CCAGTACCGGCGGCCCGCCAAGCTCTCTGCGCCGCG...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS TCA 90 bp AGAGGCTCCCTGCAGGCCCACCAGCAGACAGGGGCTTGGACGAGATaGCCTCTGGGAGCCCCCTTGGCCAGCTGGTGCAACGTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: RGSLQAHQQTGAWTR*PLGAPLASWCNVGE
Trigger: CTCTCCCACGTTGCACCAGCTGGCCAAGGGGGCTCCCAGAGGTCATCTCGTCCAAGCCCCTGTCTGCTGGTGGGCCTGCAGGGAGCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 90 bp CCCTCAGACTTGCTGTTGGTCACGAGAGAGGTCGCAGAGGCTCCCTaGAGGCCCACCAGCAGACAGGGGCTTGGACGAGATGACCTCTGG +
Preference number: 5 (lower is better)
Translates to: PSDLLLVTREVAEAP*RPTSRQGLGRDDLW
Trigger: CCAGAGGTCATCTCGTCCAAGCCCCTGTCTGCTGGTGGGCCTGCAGGGAGCCTCTGCGACCTCTCTCGTGACCAACAGCAAGTCTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 90 bp TCTGGCCGTGGGGTCACATTCCCAGCCACAGGATCGCCTTTCTCCTaGAGGTCCCGCAGTGCCTGTTCTCTCTCCTGTCAGCCTGTCCGT +
Preference number: 5 (lower is better)
Translates to: SGRGVTFPATGSPFS*RSRSACSLSCQPVR
Trigger: ACGGACAGGCTGACAGGAGAGAGAACAGGCACTGCGGGACCTGCAGGAGAAAGGCGATCCTGTGGCTGGGAATGTGACCCCACGGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319928.8
CDS-3UTR CAA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCCGCGGCGCAGAGAGCTaGGCGGGCCGCCGGTACTGG +
Preference number: 5 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLRGAES*AGRRYW
Trigger: CCAGTACCGGCGGCCCGCCAAGCTCTCTGCGCCGCG...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp CCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGCCCTGGACAGTTTCTCGCGGCCGGAACGTCTaGTCCTTGGCGAACACCTGC +
Preference number: 5 (lower is better)
Translates to: PWFLQLHECLPVRPWTVSRGRNV*SLANTC
Trigger: GCAGGTGTTCGCCAAGGACAAGACGTTCCGGCCGCG...AGAAACTGTCCAGGGCCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACAAGGCGGGTCAGGATCTaGGTGCAGACCTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTRRVRI*VQTCWK
Trigger: CTTCCAGCAGGTCTGCACCAAGATCCTGACCCGCCT...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGTACATCTACCACTCCTaGGGCCTGGCCCAGGATCTG +
Preference number: 5 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRYIYHS*GLAQDL
Trigger: CAGATCCTGGGCCAGGCCCAAGGAGTGGTAGATGTA...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCACTGGCTCCTCCCGTaGCACCTGACACTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGHWLLP*HLTLSR
Trigger: TCTACTGAGTGTCAGGTGCAACGGGAGGAGCCAGTG...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 90 bp CTCCCTGAACCACTGCCGTTCCCCGTCCTAGCCCCCATTTCCCAGTaGTGGCTATCCTTTCACTCCTGGAGTGGCAGTGCCTTGCTCGTT +
Preference number: 5 (lower is better)
Translates to: LPEPLPFPVLAPISQ*WLSFHSWSGSALLV
Trigger: AACGAGCAAGGCACTGCCACTCCAGGAGTGAAAGGATAGCCATCACTGGGAAATGGGGGCTAGGACGGGGAACGGCAGTGGTTCAGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGGACAAAGGTCCTTCCTaGAACCCACAAAGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRDKGPS*NPQRQA
Trigger: GGCCTGCCTTTGTGGGTTCAAGGAAGGACCTTTGTC...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 90 bp CCCCAACACACTGACTCCGCACAGCAACTGGGGTGTCCTGACCAGTaGGCTAGAGTTCCACCTTACTCCTGTGGAACTTCAAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: PQHTDSAQQLGCPDQ*ARVPPYSCGTSRPG
Trigger: CCCAGGCCTTGAAGTTCCACAGGAGTAAGGTGGAACTCTAGCTCACTGGTCAGGACACCCCAGTTGCTGTGCGGAGTCAGTGTGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 90 bp CCCTACCCTGAGGCTTGCTTATGGCCAAAGCCTGGGCTTGACCTCTaGCGCTGGAGCACTGTCCTTTCTCACATCTCTGGTAACCCTGGG +
Preference number: 5 (lower is better)
Translates to: PYPEACLWPKPGLDL*RWSTVLSHISGNPG
Trigger: CCCAGGGTTACCAGAGATGTGAGAAAGGACAGTGCTCCAGCGTCAGAGGTCAAGCCCAGGCTTTGGCCATAAGCAAGCCTCAGGGTAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CCA 90 bp CCCAACCTGCTTCCTGTCCCCAACACACTGACTCCGCACAGCAACTaGGGTGTCCTGACCAGTGAGCTAGAGTTCCACCTTACTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PNLLPVPNTLTPHSN*GVLTSELEFHLTPV
Trigger: CACAGGAGTAAGGTGGAACTCTAGCTCACTGGTCAGGACACCCCAGTTGCTGTGCGGAGTCAGTGTGTTGGGGACAGGAAGCAGGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp GGGCCAGGGGACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACAGAGGCCTGTGCCTTCTaGTACAGCTCAAAGCGCTGT +
Preference number: 5 (lower is better)
Translates to: GPGDLCVLEGSSPTPRRTEACAF*YSSKRC
Trigger: ACAGCGCTTTGAGCTGTACAAGAAGGCACAGGCCTC...TGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCCCTGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp CCCTGCGGTCAGGATCCCTGGTTTCTCCAGCTCCATGAATGCCTCCCTGTGAGGATTCCTCCAATAGGCTaGGGAACCAGCATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PCGQDPWFLQLHECLPVRIPPIG*GTSMEG
Trigger: CCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAAT...CCTCACAGGGAGGCATTCATGGAGCTGGAGAAACCAGGGATCCTGACCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp TCCTGGGGGTCCCCTCTGCCAGCCACCCTATGTTCAGATCGTCCATCTGATGGCCCCAGAAATCAGCCCTaGCCACAGCCTAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: SWGSPLPATLCSDRPSDGPRNQP*PQPRIH
Trigger: ATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGG...GCCATCAGATGGACGATCTGAACATAGGGTGGCTGGCAGAGGGGACCCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCATGGAGTGGCAGTGCCTaGCTCGTTCCCTGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSWSGSA*LVPWVR
Trigger: CCGCACCCAGGGAACGAGCAAGGCACTGCCACTCCA...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp ACCCACATTCCTCCAATAGGCTTGGGAACCAGCATGGAAGGGTCAAGTGTCATACGCGGCCGGAACGTCTaGTCCTTGGCGAACACCTGC +
Preference number: 5 (lower is better)
Translates to: THIPPIGLGTSMEGSSVIRGRNV*SLANTC
Trigger: GCAGGTGTTCGCCAAGGACAAGACGTTCCGGCCGCG...TATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS GCA 90 bp AAGGCCTGGGTCTCTTTCCAGGAAAATGTAAGCTCAGGGGGTGGGTaGAGGGCAGGTGCTCTTCTAGCCACAGGGTTAACTCCCTTCACT +
Preference number: 5 (lower is better)
Translates to: KAWVSFQENVSSGGG*RAGALLATGLTPFT
Trigger: AGTGAAGGGAGTTAACCCTGTGGCTAGAAGAGCACCTGCCCTGCACCCACCCCCTGAGCTTACATTTTCCTGGAAAGAGACCCAGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CCA 90 bp CTTCAAGGCCTGGGTCTCTTTCCAGGAAAATGTAAGCTCAGGGGGTaGGTGCAGGGCAGGTGCTCTTCTAGCCACAGGGTTAACTCCCTT +
Preference number: 5 (lower is better)
Translates to: LQGLGLFPGKCKLRG*VQGRCSSSHRVNSL
Trigger: AAGGGAGTTAACCCTGTGGCTAGAAGAGCACCTGCCCTGCACCCACCCCCTGAGCTTACATTTTCCTGGAAAGAGACCCAGGCCTTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGGAGGCCTGTGCCTTCTaGTACAGCTCAAAGCGCTGT +
Preference number: 5 (lower is better)
Translates to: VGHDIGCLAQETTPANPREACAF*YSSKRC
Trigger: ACAGCGCTTTGAGCTGTACAAGAAGGCACAGGCCTC...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATCTGGCATTCAGCACCTaGTCCTACCTTTCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHLAFST*SYLSCP
Trigger: GGGGCAGGAAAGGTAGGACAAGGTGCTGAATGCCAG...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGATTCCTCCAATAGGCTaGGGAACCAGCATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: VGHDIGCLAQETTPANPRIPPIG*GTSMEG
Trigger: CCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAAT...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGGACGGGGAGATTATTTaGTGCTGGGCTTCAGATCCG +
Preference number: 5 (lower is better)
Translates to: VGHDIGCLAQETTPANPRDGEII*CWASDP
Trigger: CGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTC...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS TCA 90 bp AAGGGCATAGGGGAGCTGGCGGTCAAGGCCTTATCATCTGGGCTCTaGCTTCCCAATTCATCATTTCCCTGTCACCTCTCAGCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: KGIGELAVKALSSGL*LPNSSFPCHLSAFA
Trigger: AGCAAAGGCTGAGAGGTGACAGGGAAATGATGAATTGGGAAGTCAGAGCCCAGATGATAAGGCCTTGACCGCCAGCTCCCCTATGCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CCA 90 bp GTCCTCCCATCTTGCTTTGTCTCTTTTCTGCTTTCATTGCAGAGCTaGGCCTGGGCTCTAAACAGGTGCCCCTCAGACTTGCTGTTGGTC +
Preference number: 5 (lower is better)
Translates to: VLPSCFVSFLLSLQS*AWALNRCPSDLLLV
Trigger: GACCAACAGCAAGTCTGAGGGGCACCTGTTTAGAGCCCAGGCCCAGCTCTGCAATGAAAGCAGAAAAGAGACAAAGCAAGATGGGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTAGGCGGGTCAGGATCTaGGTGCAGACCTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFRRVRI*VQTCWK
Trigger: CTTCCAGCAGGTCTGCACCAAGATCCTGACCCGCCT...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp TCCAACCCCCAGGAGGACACGTATAATACAGGCCTTCTTGGAGGCAGAGGGATGGAGTGGGGCATGATATaGGATGCTTGGCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: SNPQEDTYNTGLLGGRGMEWGMI*DAWLRK
Trigger: TTTCCTGAGCCAAGCATCCAATATCATGCCCCACTC...CATCCCTCTGCCTCCAAGAAGGCCTGTATTATACGTGTCCTCCTGGGGGTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp ACCCACATTCCTCCAATAGGCTTGGGAACCAGCATGGAAGGGTCAAGTGTCATACCACACATCCTCAGATaGGCTGCTACCTCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: THIPPIGLGTSMEGSSVIPHILR*AATSSH
Trigger: GTGGGAGGAGGTAGCAGCCAATCTGAGGATGTGTGG...TATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTCCTGGGCTCCCCACATaGCATGGCCCCCTTTATGAC +
Preference number: 5 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFPGLPT*HGPLYD
Trigger: GTCATAAAGGGGGCCATGCAATGTGGGGAGCCCAGG...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 90 bp CCAATTCATCATTTCCCTGTCACCTCTCAGCCTTTGCTCAACCTCTaGATCCTCTGCCTGGAATCTAAGTCCTCAGCCCCTAGGTCCAGT +
Preference number: 5 (lower is better)
Translates to: PIHHFPVTSQPLLNL*ILCLESKSSAPRSS
Trigger: ACTGGACCTAGGGGCTGAGGACTTAGATTCCAGGCAGAGGATGCAGAGGTTGAGCAAAGGCTGAGAGGTGACAGGGAAATGATGAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CCA 90 bp ATCCATCCCGACTCTTCGACTTCTCACCCAAAGAAGTCCCCAGGGTaGGACCCCAGTTTCCAGAGCAAAGAGATTTCTGCGCTTCATTTG +
Preference number: 5 (lower is better)
Translates to: IHPDSSTSHPKKSPG*DPSFQSKEISALHL
Trigger: CAAATGAAGCGCAGAAATCTCTTTGCTCTGGAAACTGGGGTCCCACCCTGGGGACTTCTTTGGGTGAGAAGTCGAAGAGTCGGGATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS-3UTR CAA 90 bp AAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTCTTTCCATGTGTATCTCTCGCGGCCGGAACGTCTaGTCCTTGGCGAACACCTGC +
Preference number: 5 (lower is better)
Translates to: KQLCPREGLLNPLSMCISRGRNV*SLANTC
Trigger: GCAGGTGTTCGCCAAGGACAAGACGTTCCGGCCGCG...AGAGATACACATGGAAAGAGGGTTTAACAGACCCTCTCTAGGACACAACTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTGGGACCTTTGTGTACTaGAGGGATCATCTCCAACCC +
Preference number: 5 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLGTFVY*RDHLQP
Trigger: GGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCC...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GGAAGGGTCAAGTGTCATAGAAGAAACCCCCTAGCCTACCCTACTCCCAGACTTGACGGGGAGATTATTTaGTGCTGGGCTTCAGATCCG +
Preference number: 5 (lower is better)
Translates to: GRVKCHRRNPLAYPTPRLDGEII*CWASDP
Trigger: CGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTC...AAGTCTGGGAGTAGGGTAGGCTAGGGGGTTTCTTCTATGACACTTGACCCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCAGACGGGGAGATTATTTaGTGCTGGGCTTCAGATCCG +
Preference number: 5 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSDGEII*CWASDP
Trigger: CGGATCTGAAGCCCAGCACAAAATAATCTCCCCGTC...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGAGTTCCACAAGCTCCTaGGACGGGGAGATTATTTTG +
Preference number: 5 (lower is better)
Translates to: VGHDIGCLAQETTPANPRSSTSS*DGEIIL
Trigger: CAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACT...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATAAGGTGCCCCTCAGACTaGCTGTTGGTCACGAGAGAG +
Preference number: 5 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIRCPSD*LLVTRE
Trigger: CTCTCTCGTGACCAACAGCAAGTCTGAGGGGCACCT...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 90 bp GGGGTATTACTTCTGGCAAGAAGTCAAACTAGCTGGGGAGCTGTTTaGGACAAAGGTCCTTCCTTGAACCCACAAAGGCAGGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: GVLLLARSQTSWGAV*DKGPSLNPQRQARM
Trigger: CATCCTGGCCTGCCTTTGTGGGTTCAAGGAAGGACCTTTGTCTCAAACAGCTCCCCAGCTAGTTTGACTTCTTGCCAGAAGTAATACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp ACCCACATTCCTCCAATAGGCTTGGGAACCAGCATGGAAGGGTCAAGTGTCATAAAGACCTCTTCGTCGTaGATGAGGCCTTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: THIPPIGLGTSMEGSSVIKTSSS*MRPSIQ
Trigger: CTGGATCGAAGGCCTCATCAACGACGAAGAGGTCTT...TATGACACTTGACCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAATGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGATTCCTCCAATAGGCTaGGGAACCAGCATGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMIPPIG*GTSMEG
Trigger: CCCTTCCATGCTGGTTCCCAAGCCTATTGGAGGAAT...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATGAGTGGGGCATGATATaGGATGCTTGGCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHEWGMI*DAWLRK
Trigger: TTTCCTGAGCCAAGCATCCAATATCATGCCCCACTC...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCAAGACCTCTTCGTCGTaGATGAGGCCTTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: KSPFTNYILNVLGWETRLKTSSS*MRPSIQ
Trigger: CTGGATCGAAGGCCTCATCAACGACGAAGAGGTCTT...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATATTTCTTGCACCTTTCTaGCCATCACCTCGGCCACAC +
Preference number: 5 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIIFLAPF*PSPRPH
Trigger: GTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAA...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCTTTCTTGCACCTTTCTaGCCATCACCTCGGCCACAC +
Preference number: 5 (lower is better)
Translates to: KSPFTNYILNVLGWETRLFLAPF*PSPRPH
Trigger: GTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAA...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCTCAAAGCAGAAACAGTaGTGTCCTAGAGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLSKQKQ*CPREGL
Trigger: CAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGA...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp CTGCGTATAGGGCTGGGTATGGAGGTACTGAGTAATGGAGTGCTGCGTGAACATTCAAAGCAGAAACAGTaGTGTCCTAGAGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LRIGLGMEVLSNGVLREHSKQKQ*CPREGL
Trigger: CAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGA...ATGTTCACGCAGCACTCCATTACTCAGTACCTCCATACCCAGCCCTATACGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GTGCACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCATCAAAGCAGAAACAGTaGTGTCCTAGAGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: VHLHTWSDTLSGDAELSSSKQKQ*CPREGL
Trigger: CAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGA...TGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTCCCAGAAATCAGCCCTaGCCACAGCCTAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFPRNQP*PQPRIH
Trigger: ATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGG...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp AAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGACTCCCCAGAAATCAGCCCTaGCCACAGCCTAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: KSPFTNYILNVLGWETRLPRNQP*PQPRIH
Trigger: ATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGG...GAGTCTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGAGGATGGCCCCAGTTaGAACCCAGAATCCATCCTG +
Preference number: 5 (lower is better)
Translates to: NSSSTSSLDGEIILCWASEDGPS*NPESIL
Trigger: CAGGATGGATTCTGGGTTCAAACTGGGGCCATCCTC...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGCACGCCCCCACTCTTTaGCCTCTGCATGTTTTCTTA +
Preference number: 5 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKHAPTL*PLHVFL
Trigger: TAAGAAAACATGCAGAGGCAAAAGAGTGGGGGCGTG...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp CAACCCTCCCCCTATCCCAGAAATCAGCCCTTGCCACAGCCTAGAATCCATCATCATTTTAAACTCTGCTaGGGGCAAGTGCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: QPSPYPRNQPLPQPRIHHHFKLC*GQVLPK
Trigger: TTTTGGAAGCACTTGCCCCAAGCAGAGTTTAAAATG...ATGATGGATTCTAGGCTGTGGCAAGGGCTGATTTCTGGGATAGGGGGAGGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS-3UTR CAA 90 bp TCTGTTAAACCCTCTTTCCATGTGTATCTCTATGTAGCAATTGATGGGCCCTGCGAGGCCTGTGCCTTCTaGTACAGCTCAAAGCGCTGT +
Preference number: 5 (lower is better)
Translates to: SVKPSFHVYLYVAIDGPCEACAF*YSSKRC
Trigger: ACAGCGCTTTGAGCTGTACAAGAAGGCACAGGCCTC...GCAGGGCCCATCAATTGCTACATAGAGATACACATGGAAAGAGGGTTTAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp AATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTAAACCCTAGGCGGGTCAGGATCTaGGTGCAGACCTGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: NYCSKQKQLCPREGLLNPRRVRI*VQTCWK
Trigger: CTTCCAGCAGGTCTGCACCAAGATCCTGACCCGCCT...AGGGTTTAACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GTGGGGCATGATATTGGATGCTTGGCTCAGGAAACAACCCCAGCCAACCCAAGGTCTACAACCACATTTTaGTGCACTTACACACATGGT +
Preference number: 5 (lower is better)
Translates to: VGHDIGCLAQETTPANPRSTTTF*CTYTHG
Trigger: ACCATGTGTGTAAGTGCACAAAAATGTGGTTGTAGA...CCTTGGGTTGGCTGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp CTCACTTTCTTGCACCTTTCTTGCCATCACCTCGGCCACACCCACATTCCTCCATGTAGCCTGGAAGGTTaGAATGTAGAGCAACATCTA +
Preference number: 5 (lower is better)
Translates to: LTFLHLSCHHLGHTHIPPCSLEG*NVEQHL
Trigger: TAGATGTTGCTCTACATTCAAACCTTCCAGGCTACA...TGGAGGAATGTGGGTGTGGCCGAGGTGATGGCAAGAAAGGTGCAAGAAAGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGGGACCTTTGTGTACTaGAGGGATCATCTCCAACCC +
Preference number: 5 (lower is better)
Translates to: NSSSTSSLDGEIILCWASGTFVY*RDHLQP
Trigger: GGGTTGGAGATGATCCCTCAAGTACACAAAGGTCCC...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp GGATGGAGGATCTCCATGCCTGGAAGAGTCCATTCACCAACTACATCCTCAATGAGTTCCACAAGCTCCTaGGACGGGGAGATTATTTTG +
Preference number: 5 (lower is better)
Translates to: GWRISMPGRVHSPTTSSMSSTSS*DGEIIL
Trigger: CAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACT...CATTGAGGATGTAGTTGGTGAATGGACTCTTCCAGGCATGGAGATCCTCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp CACTTACACACATGGTCAGATACACTGAGTGGGGACGCTGAGCTGTCATCACTCGATTCAGAACAAATTTaGGGAGACAGTGATCAGGGC +
Preference number: 5 (lower is better)
Translates to: HLHTWSDTLSGDAELSSLDSEQI*GDSDQG
Trigger: GCCCTGATCACTGTCTCCCAAAATTTGTTCTGAATC...GAGTGATGACAGCTCAGCGTCCCCACTCAGTGTATCTGACCATGTGTGTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp GACCTTTGTGTACTTGAGGGATCATCTCCAACCCCCAGGAGGACACGTATAATAAGTTCCACAAGCTCCTaGGACGGGGAGATTATTTTG +
Preference number: 5 (lower is better)
Translates to: DLCVLEGSSPTPRRTRIISSTSS*DGEIIL
Trigger: CAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACT...TATTATACGTGTCCTCCTGGGGGTTGGAGATGATCCCTCAAGTACACAAAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp TCCTACAGTGGTCATGGTCTGATGGTCCCATGGTCTGATGGTCCCAATCTATTTCATGATATTGGATGCTaGGCTCAGGAAACAACCCCA +
Preference number: 5 (lower is better)
Translates to: SYSGHGLMVPWSDGPNLFHDIGC*AQETTP
Trigger: TGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATG...AAATAGATTGGGACCATCAGACCATGGGACCATCAGACCATGACCACTGTAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp TTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCAGACATGATATTGGATGCTaGGCTCAGGAAACAACCCCA +
Preference number: 5 (lower is better)
Translates to: FKFHKLLGRGDYFVLGFRHDIGC*AQETTP
Trigger: TGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATG...TCTGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp CTGGAAGAGTCCATTCACCAACTACATCCTCAATGTGCTGGGATGGGAGACAAGCATTTTAAACTCTGCTaGGGGCAAGTGCTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: LEESIHQLHPQCAGMGDKHFKLC*GQVLPK
Trigger: TTTTGGAAGCACTTGCCCCAAGCAGAGTTTAAAATG...CTTGTCTCCCATCCCAGCACATTGAGGATGTAGTTGGTGAATGGACTCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS-3UTR CAA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCACATGATATTGGATGCTaGGCTCAGGAAACAACCCCA +
Preference number: 5 (lower is better)
Translates to: NSSSTSSLDGEIILCWASHDIGC*AQETTP
Trigger: TGGGGTTGTTTCCTGAGCCAAGCATCCAATATCATG...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGTCTTTTCTGCTTTCATaGCAGAGCTGGGCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: WPQVRNYCSKQKQLCPRESFLLS*QSWAWA
Trigger: AGCCCAGGCCCAGCTCTGCAATGAAAGCAGAAAAGA...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS-3UTR CAA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTAAGACCTCTTCGTCGTaGATGAGGCCTTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCKTSSS*MRPSIQ
Trigger: CTGGATCGAAGGCCTCATCAACGACGAAGAGGTCTT...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp TGGCCTCAGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGAGTGGGGCATGATATaGGATGCTTGGCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: WPQVRNYCSKQKQLCPREEWGMI*DAWLRK
Trigger: TTTCCTGAGCCAAGCATCCAATATCATGCCCCACTC...CTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCTGAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp AATTCAAGTTCCACAAGCTCCTTGGACGGGGAGATTATTTTGTGCTGGGCTTCATCTACAACCACATTTTaGTGCACTTACACACATGGT +
Preference number: 5 (lower is better)
Translates to: NSSSTSSLDGEIILCWASSTTTF*CTYTHG
Trigger: ACCATGTGTGTAAGTGCACAAAAATGTGGTTGTAGA...TGAAGCCCAGCACAAAATAATCTCCCCGTCCAAGGAGCTTGTGGAACTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS-3UTR CAA 90 bp AGGTTAGAAATTATTGCTCAAAGCAGAAACAGTTGTGTCCTAGAGAGGGTCTGTTGTAGCCTGGAAGGTTaGAATGTAGAGCAACATCTA +
Preference number: 5 (lower is better)
Translates to: RLEIIAQSRNSCVLERVCCSLEG*NVEQHL
Trigger: TAGATGTTGCTCTACATTCAAACCTTCCAGGCTACA...ACAGACCCTCTCTAGGACACAACTGTTTCTGCTTTGAGCAATAATTTCTAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS TCA 72 bp CCTGCCAGCGGTACTCGTAGCGGGGCCCGCCGGCCATaGCCGGGCAGCTGGTCTCACTGCAGCGCTCCGCCA +
Preference number: 6 (lower is better)
Translates to: PASGTRSGARRP*PGSWSHCSAPP
Trigger: TGGCGGAGCGCTGCAGTGAGACCAGCTGCCCGGTCATGGCCGGCGGGCCCCGCTACGAGTACCGCTGGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS GCA 72 bp CGGCGCGCAGCCACCCACGCCCACCCCCGGCTTCCCTaGAACCTCAAACCAGCTCCCAGGGCCAGGAAGGTC +
Preference number: 6 (lower is better)
Translates to: RRAATHAHPRLP*NLKPAPRARKV
Trigger: GACCTTCCTGGCCCTGGGAGCTGGTTTGAGGTTGCAGGGAAGCCGGGGGTGGGCGTGGGTGGCTGCGCGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 72 bp GCAGTGCCTGTTCTCTCTCCTGTCAGCCTGTCCGTCTaGCTGTCCTGCCGGCCGCGGCTGCCCTCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: AVPVLSPVSLSV*LSCRPRLPSCP
Trigger: GGGGCAGGAGGGCAGCCGCGGCCGGCAGGACAGGCAGACGGACAGGCTGACAGGAGAGAGAACAGGCACTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319928.8
CDS CCA 72 bp GACCTCTGGGAGCCCCCTTGGCCAGCTGGTGCAACGTaGGAGAGCCTCGCAGCATTGTGCTGGGGGCAGGGT +
Preference number: 6 (lower is better)
Translates to: DLWEPPWPAGAT*ESLAALCWGQG
Trigger: ACCCTGCCCCCAGCACAATGCTGCGAGGCTCTCCCACGTTGCACCAGCTGGCCAAGGGGGCTCCCAGAGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CAA 90 bp GAGAGGTCGCAGAGGCTCCCTGCAGGCCCACCAGCAGACAGGGGCTaGGACGAGATGACCTCTGGGAGCCCCCTTGGCCAGCTGGTGCAA +
Preference number: 6 (lower is better)
Translates to: ERSQRLPAGPPADRG*DEMTSGSPLGQLVQ
Trigger: TTGCACCAGCTGGCCAAGGGGGCTCCCAGAGGTCATCTCGTCCAAGCCCCTGTCTGCTGGTGGGCCTGCAGGGAGCCTCTGCGACCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 72 bp CTGCAGGCCCACCAGCAGACAGGGGCTTGGACGAGATaGCCTCTGGGAGCCCCCTTGGCCAGCTGGTGCAAC +
Preference number: 6 (lower is better)
Translates to: LQAHQQTGAWTR*PLGAPLASWCN
Trigger: GTTGCACCAGCTGGCCAAGGGGGCTCCCAGAGGTCATCTCGTCCAAGCCCCTGTCTGCTGGTGGGCCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CAA 90 bp CAGAGCTGGGCCTGGGCTCTAAACAGGTGCCCCTCAGACTTGCTGTaGGTCACGAGAGAGGTCGCAGAGGCTCCCTGCAGGCCCACCAGC +
Preference number: 6 (lower is better)
Translates to: QSWAWALNRCPSDLL*VTREVAEAPCRPTS
Trigger: GCTGGTGGGCCTGCAGGGAGCCTCTGCGACCTCTCTCGTGACCAACAGCAAGTCTGAGGGGCACCTGTTTAGAGCCCAGGCCCAGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CAA 90 bp TCATTGCAGAGCTGGGCCTGGGCTCTAAACAGGTGCCCCTCAGACTaGCTGTTGGTCACGAGAGAGGTCGCAGAGGCTCCCTGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: SLQSWAWALNRCPSD*LLVTREVAEAPCRP
Trigger: GGGCCTGCAGGGAGCCTCTGCGACCTCTCTCGTGACCAACAGCAAGTCTGAGGGGCACCTGTTTAGAGCCCAGGCCCAGCTCTGCAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 72 bp AGGCCTGTGCCTTCTTGTACAGCTCAAAGCGCTGTGTaGCCGGCTCAAAGCGCTTCCGCGGCCGGAACGTCT +
Preference number: 6 (lower is better)
Translates to: RPVPSCTAQSAV*PAQSASAAGTS
Trigger: AGACGTTCCGGCCGCGGAAGCGCTTTGAGCCGGGCACACAGCGCTTTGAGCTGTACAAGAAGGCACAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000271139.13
ENST00000319928.8
ENST00000371940.1
CDS GCA 72 bp TTGCTGTTGGTCACGAGAGAGGTCGCAGAGGCTCCCTaGAGGCCCACCAGCAGACAGGGGCTTGGACGAGAT +
Preference number: 6 (lower is better)
Translates to: LLLVTREVAEAP*RPTSRQGLGRD
Trigger: ATCTCGTCCAAGCCCCTGTCTGCTGGTGGGCCTGCAGGGAGCCTCTGCGACCTCTCTCGTGACCAACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CAA 72 bp GCCTGGGCTCTAAACAGGTGCCCCTCAGACTTGCTGTaGGTCACGAGAGAGGTCGCAGAGGCTCCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: AWALNRCPSDLL*VTREVAEAPCR
Trigger: CCTGCAGGGAGCCTCTGCGACCTCTCTCGTGACCAACAGCAAGTCTGAGGGGCACCTGTTTAGAGCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CAA 72 bp AGCTGGGCCTGGGCTCTAAACAGGTGCCCCTCAGACTaGCTGTTGGTCACGAGAGAGGTCGCAGAGGCTCCC +
Preference number: 6 (lower is better)
Translates to: SWAWALNRCPSD*LLVTREVAEAP
Trigger: GGGAGCCTCTGCGACCTCTCTCGTGACCAACAGCAAGTCTGAGGGGCACCTGTTTAGAGCCCAGGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 72 bp CCACTGCCGTTCCCCGTCCTAGCCCCCATTTCCCAGTaGTGGCTATCCTTTCACTCCTGGAGTGGCAGTGCC +
Preference number: 6 (lower is better)
Translates to: PLPFPVLAPISQ*WLSFHSWSGSA
Trigger: GGCACTGCCACTCCAGGAGTGAAAGGATAGCCATCACTGGGAAATGGGGGCTAGGACGGGGAACGGCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 72 bp CCAGTGATGGCTATCCTTTCACTCCTGGAGTGGCAGTaGCTTGCTCGTTCCCTGGGTGCGGATCTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: PVMAILSLLEWQ*LARSLGADLGF
Trigger: GAAGCCCAGATCCGCACCCAGGGAACGAGCAAGGCACTGCCACTCCAGGAGTGAAAGGATAGCCATCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 72 bp GGAAAATGTAAGCTCAGGGGGTGGGTGCAGGGCAGGTaGTCTTCTAGCCACAGGGTTAACTCCCTTCACTCC +
Preference number: 6 (lower is better)
Translates to: GKCKLRGWVQGR*SSSHRVNSLHS
Trigger: GGAGTGAAGGGAGTTAACCCTGTGGCTAGAAGAGCACCTGCCCTGCACCCACCCCCTGAGCTTACATTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 72 bp CTTTCATTGCAGAGCTGGGCCTGGGCTCTAAACAGGTaGCCCTCAGACTTGCTGTTGGTCACGAGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: LSLQSWAWALNR*PSDLLLVTREV
Trigger: GACCTCTCTCGTGACCAACAGCAAGTCTGAGGGGCACCTGTTTAGAGCCCAGGCCCAGCTCTGCAATGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CCA 72 bp CATTTCCCAGTGATGGCTATCCTTTCACTCCTGGAGTaGCAGTGCCTTGCTCGTTCCCTGGGTGCGGATCTG +
Preference number: 6 (lower is better)
Translates to: HFPVMAILSLLE*QCLARSLGADL
Trigger: CAGATCCGCACCCAGGGAACGAGCAAGGCACTGCCACTCCAGGAGTGAAAGGATAGCCATCACTGGGAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CCA 72 bp CTGGGTCTCTTTCCAGGAAAATGTAAGCTCAGGGGGTaGGTGCAGGGCAGGTGCTCTTCTAGCCACAGGGTT +
Preference number: 6 (lower is better)
Translates to: LGLFPGKCKLRG*VQGRCSSSHRV
Trigger: AACCCTGTGGCTAGAAGAGCACCTGCCCTGCACCCACCCCCTGAGCTTACATTTTCCTGGAAAGAGACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CCA 72 bp CTTCCTGTCCCCAACACACTGACTCCGCACAGCAACTaGGGTGTCCTGACCAGTGAGCTAGAGTTCCACCTT +
Preference number: 6 (lower is better)
Translates to: LPVPNTLTPHSN*GVLTSELEFHL
Trigger: AAGGTGGAACTCTAGCTCACTGGTCAGGACACCCCAGTTGCTGTGCGGAGTCAGTGTGTTGGGGACAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CAA 90 bp GCCTTTAGCCCTACCCTGAGGCTTGCTTATGGCCAAAGCCTGGGCTaGACCTCTGACGCTGGAGCACTGTCCTTTCTCACATCTCTGGTA +
Preference number: 6 (lower is better)
Translates to: AFSPTLRLAYGQSLG*TSDAGALSFLTSLV
Trigger: TACCAGAGATGTGAGAAAGGACAGTGCTCCAGCGTCAGAGGTCAAGCCCAGGCTTTGGCCATAAGCAAGCCTCAGGGTAGGGCTAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 72 bp GAGGCTTGCTTATGGCCAAAGCCTGGGCTTGACCTCTaGCGCTGGAGCACTGTCCTTTCTCACATCTCTGGT +
Preference number: 6 (lower is better)
Translates to: EACLWPKPGLDL*RWSTVLSHISG
Trigger: ACCAGAGATGTGAGAAAGGACAGTGCTCCAGCGTCAGAGGTCAAGCCCAGGCTTTGGCCATAAGCAAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CCA 72 bp TTTCACTCCTGGAGTGGCAGTGCCTTGCTCGTTCCCTaGGTGCGGATCTGGGCTTCTCAAATGAAGACAGCA +
Preference number: 6 (lower is better)
Translates to: FHSWSGSALLVP*VRIWASQMKTA
Trigger: TGCTGTCTTCATTTGAGAAGCCCAGATCCGCACCCAGGGAACGAGCAAGGCACTGCCACTCCAGGAGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CAA 90 bp ACCACCCTGGGCTTCTTCCTGATTCCTGAACACGCCCCCACTCTTTaGCCTCTGCATGTTTTCTTATCCCTCCACCTGCCTGACCACACA +
Preference number: 6 (lower is better)
Translates to: TTLGFFLIPEHAPTL*PLHVFLSLHLPDHT
Trigger: TGTGTGGTCAGGCAGGTGGAGGGATAAGAAAACATGCAGAGGCAAAAGAGTGGGGGCGTGTTCAGGAATCAGGAAGAAGCCCAGGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 72 bp ACTGACTCCGCACAGCAACTGGGGTGTCCTGACCAGTaGGCTAGAGTTCCACCTTACTCCTGTGGAACTTCA +
Preference number: 6 (lower is better)
Translates to: TDSAQQLGCPDQ*ARVPPYSCGTS
Trigger: TGAAGTTCCACAGGAGTAAGGTGGAACTCTAGCTCACTGGTCAGGACACCCCAGTTGCTGTGCGGAGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 72 bp GGGGAGCTGGCGGTCAAGGCCTTATCATCTGGGCTCTaGCTTCCCAATTCATCATTTCCCTGTCACCTCTCA +
Preference number: 6 (lower is better)
Translates to: GELAVKALSSGL*LPNSSFPCHLS
Trigger: TGAGAGGTGACAGGGAAATGATGAATTGGGAAGTCAGAGCCCAGATGATAAGGCCTTGACCGCCAGCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 72 bp GTCTCTTTCCAGGAAAATGTAAGCTCAGGGGGTGGGTaGAGGGCAGGTGCTCTTCTAGCCACAGGGTTAACT +
Preference number: 6 (lower is better)
Translates to: VSFQENVSSGGG*RAGALLATGLT
Trigger: AGTTAACCCTGTGGCTAGAAGAGCACCTGCCCTGCACCCACCCCCTGAGCTTACATTTTCCTGGAAAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS CCA 72 bp GACTCTTCGACTTCTCACCCAAAGAAGTCCCCAGGGTaGGACCCCAGTTTCCAGAGCAAAGAGATTTCTGCG +
Preference number: 6 (lower is better)
Translates to: DSSTSHPKKSPG*DPSFQSKEISA
Trigger: CGCAGAAATCTCTTTGCTCTGGAAACTGGGGTCCCACCCTGGGGACTTCTTTGGGTGAGAAGTCGAAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271139.13
ENST00000371940.1
CDS CAA 72 bp GGCTTCTTCCTGATTCCTGAACACGCCCCCACTCTTTaGCCTCTGCATGTTTTCTTATCCCTCCACCTGCCT +
Preference number: 6 (lower is better)
Translates to: GFFLIPEHAPTL*PLHVFLSLHLP
Trigger: AGGCAGGTGGAGGGATAAGAAAACATGCAGAGGCAAAAGAGTGGGGGCGTGTTCAGGAATCAGGAAGAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 72 bp GTGCGGATCTGGGCTTCTCAAATGAAGACAGCAGGCTaGCCCTACCTGTTTCTGATATTTAGCCCCCTGCTA +
Preference number: 6 (lower is better)
Translates to: VRIWASQMKTAG*PYLFLIFSPLL
Trigger: TAGCAGGGGGCTAAATATCAGAAACAGGTAGGGTCAGCCTGCTGTCTTCATTTGAGAAGCCCAGATCCGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS GCA 72 bp CTCTTTTGCCTCTGCATGTTTTCTTATCCCTCCACCTaGCTGACCACACATCCTCAGATTGGCTGCTACCTC +
Preference number: 6 (lower is better)
Translates to: LFCLCMFSYPST*LTTHPQIGCYL
Trigger: GAGGTAGCAGCCAATCTGAGGATGTGTGGTCAGGCAGGTGGAGGGATAAGAAAACATGCAGAGGCAAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371940.1
CDS TCA 72 bp CTTCTGGCAAGAAGTCAAACTAGCTGGGGAGCTGTTTaGGACAAAGGTCCTTCCTTGAACCCACAAAGGCAG +
Preference number: 6 (lower is better)
Translates to: LLARSQTSWGAV*DKGPSLNPQRQ
Trigger: CTGCCTTTGTGGGTTCAAGGAAGGACCTTTGTCTCAAACAGCTCCCCAGCTAGTTTGACTTCTTGCCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371940.1