RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MOB3B (Homo sapiens)

Ensembl gene IDs: ENSG00000120162

Ensembl transcript IDs: ENST00000262244.6, ENST00000603061.1

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACCTCTGCTGTTCCTGGGAGTAGGTGTGTCATTTCAGCCAGGGTaGTCCACCTCCTGCCCGCTCAGGGCACCAGGAGGAAACAGCTTT +
Preference number: 1 (lower is better)
Translates to: PPLLFLGVGVSFQPG*STSCPLRAPGGNSF
Trigger: AAAGCTGTTTCCTCCTGGTGCCCTGAGCGGGCAGGAGGTGGACCACCCTGGCTGAAATGACACACCTACTCCCAGGAACAGCAGAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 90 bp GAGGCTTCCTCGTGGACAATTCCCCAGCCAGAACGGTCAAGGGGCTaGTCCTTCTTTCACGTTGTGGTCTGCCTCGTCCACAGGTCTGGG +
Preference number: 1 (lower is better)
Translates to: EASSWTIPQPERSRG*SFFHVVVCLVHRSG
Trigger: CCCAGACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCTTGACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 90 bp AGCTTAGGCGGCAGGTCACAGGCAGAACTGTGCCATGTGTGGAAGTaGAGAGGCTTCCTCGTGGACAATTCCCCAGCCAGAACGGTCAAG +
Preference number: 1 (lower is better)
Translates to: SLGGRSQAELCHVWK*RGFLVDNSPARTVK
Trigger: CTTGACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATGGCACAGTTCTGCCTGTGACCTGCCGCCTAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 90 bp TTCCTGGGAGTAGGTGTGTCATTTCAGCCAGGGTGGTCCACCTCCTaGCCGCTCAGGGCACCAGGAGGAAACAGCTTTCCTTTCTTCCAA +
Preference number: 1 (lower is better)
Translates to: FLGVGVSFQPGWSTS*PLRAPGGNSFPFFQ
Trigger: TTGGAAGAAAGGAAAGCTGTTTCCTCCTGGTGCCCTGAGCGGGCAGGAGGTGGACCACCCTGGCTGAAATGACACACCTACTCCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 90 bp CAGCCAGAACGGTCAAGGGGCTGGTCCTTCTTTCACGTTGTGGTCTaGCTCGTCCACAGGTCTGGGCTAGCAGCACTCAGAAGGTTAAGA +
Preference number: 1 (lower is better)
Translates to: QPERSRGWSFFHVVV*LVHRSGLAALRRLR
Trigger: TCTTAACCTTCTGAGTGCTGCTAGCCCAGACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCTTGACCGTTCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 90 bp CACAGGCAGAACTGTGCCATGTGTGGAAGTGCAGAGGCTTCCTCGTaGACAATTCCCCAGCCAGAACGGTCAAGGGGCTGGTCCTTCTTT +
Preference number: 1 (lower is better)
Translates to: HRQNCAMCGSAEASS*TIPQPERSRGWSFF
Trigger: AAAGAAGGACCAGCCCCTTGACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATGGCACAGTTCTGCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 90 bp GCTACAGAGTTCCTCCAGGGCATGGGCTCCGTAGTTACCTCTCTGTaGCACTGTGCTGCATTCCCATCTGGTAACTGTGTATTGCAGAGG +
Preference number: 1 (lower is better)
Translates to: ATEFLQGMGSVVTSL*HCAAFPSGNCVLQR
Trigger: CCTCTGCAATACACAGTTACCAGATGGGAATGCAGCACAGTGGCACAGAGAGGTAACTACGGAGCCCATGCCCTGGAGGAACTCTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 90 bp GTCAGCTTTACGCTAGTAACCAGTCTCTTCCCTGCAGTTAGAACGTaGAGACCCTGTTTGGGGCAGAGACAAGCCACCCCATGGAGTGTC +
Preference number: 1 (lower is better)
Translates to: VSFTLVTSLFPAVRT*RPCLGQRQATPWSV
Trigger: GACACTCCATGGGGTGGCTTGTCTCTGCCCCAAACAGGGTCTTCACGTTCTAACTGCAGGGAAGAGACTGGTTACTAGCGTAAAGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 90 bp GTTAAGAGCACACAAAGTGAGTGGGGAATGTCTCTCAGGAGTCACTaGTTGCCTCCACCTCTGCTGTTCCTGGGAGTAGGTGTGTCATTT +
Preference number: 1 (lower is better)
Translates to: VKSTQSEWGMSLRSH*LPPPLLFLGVGVSF
Trigger: AAATGACACACCTACTCCCAGGAACAGCAGAGGTGGAGGCAAGCAGTGACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 90 bp GTTACATCAGTGGTCAACAATGGAGCAACAAGACTCCGTAGAGGATaGCACCCTGGGAGAATTGCAAGGGAAAGGAGGCTGAAGCACAAC +
Preference number: 1 (lower is better)
Translates to: VTSVVNNGATRLRRG*HPGRIARERRLKHN
Trigger: GTTGTGCTTCAGCCTCCTTTCCCTTGCAATTCTCCCAGGGTGGCATCCTCTACGGAGTCTTGTTGCTCCATTGTTGACCACTGATGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 90 bp GCCACTGTGCTGCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTaGGACTTAGGGGCTCTTGTTTCTGTTCTCTGGATCTCTGTGATG +
Preference number: 1 (lower is better)
Translates to: ATVLHSHLVTVYCRG*DLGALVSVLWISVM
Trigger: CATCACAGAGATCCAGAGAACAGAAACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGCAGCACAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 90 bp GTGATGTGGAGAGCTTTGGGAAGGTTTCACGTTGAGTTACATCAGTaGTCAACAATGGAGCAACAAGACTCCGTAGAGGATGCCACCCTG +
Preference number: 1 (lower is better)
Translates to: VMWRALGRFHVELHQ*STMEQQDSVEDATL
Trigger: CAGGGTGGCATCCTCTACGGAGTCTTGTTGCTCCATTGTTGACCACTGATGTAACTCAACGTGAAACCTTCCCAAAGCTCTCCACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 90 bp AGGGAGCATACAAATCCTCACTTGCCCATGCTCTCACGTATTGCCTaGACATGGAAACTTCCTTCTTCCCCTCCCTCCTGTTATATGGAA +
Preference number: 1 (lower is better)
Translates to: REHTNPHLPMLSRIA*TWKLPSSPPSCYME
Trigger: TTCCATATAACAGGAGGGAGGGGAAGAAGGAAGTTTCCATGTGCAGGCAATACGTGAGAGCATGGGCAAGTGAGGATTTGTATGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 90 bp CTACAGGGAGCATACAAATCCTCACTTGCCCATGCTCTCACGTATTaGCTGCACATGGAAACTTCCTTCTTCCCCTCCCTCCTGTTATAT +
Preference number: 1 (lower is better)
Translates to: LQGAYKSSLAHALTY*LHMETSFFPSLLLY
Trigger: ATATAACAGGAGGGAGGGGAAGAAGGAAGTTTCCATGTGCAGGCAATACGTGAGAGCATGGGCAAGTGAGGATTTGTATGCTCCCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 90 bp TCCGTAGAGGATGCCACCCTGGGAGAATTGCAAGGGAAAGGAGGCTaGAGCACAACTGGTAATAGCCTTCAGATATTTAATGGATATGCA +
Preference number: 1 (lower is better)
Translates to: SVEDATLGELQGKGG*STTGNSLQIFNGYA
Trigger: TGCATATCCATTAAATATCTGAAGGCTATTACCAGTTGTGCTTCAGCCTCCTTTCCCTTGCAATTCTCCCAGGGTGGCATCCTCTACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 90 bp ACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTaGATTCCAGTAAAGCTTAGGCGGCAGGTCACAGGCAGAACTGTG +
Preference number: 1 (lower is better)
Translates to: TDKWKNTNTHLSLKT*IPVKLRRQVTGRTV
Trigger: CACAGTTCTGCCTGTGACCTGCCGCCTAAGCTTTACTGGAATTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 90 bp TTGCCTGCACATGGAAACTTCCTTCTTCCCCTCCCTCCTGTTATATaGAAAGGGATGAATGCTTTGCTAGTGCTATATCATCTGACTGCA +
Preference number: 1 (lower is better)
Translates to: LPAHGNFLLPLPPVI*KGMNALLVLYHLTA
Trigger: TGCAGTCAGATGATATAGCACTAGCAAAGCATTCATCCCTTTCCATATAACAGGAGGGAGGGGAAGAAGGAAGTTTCCATGTGCAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 90 bp TGCACAGTGTTAAACCACAGATCAGAGCAGGAGCTTTTAGAGACCTaGAAGGAAGGCTTATTGCATAAAAACTTGCTGCACATCCAGAGG +
Preference number: 1 (lower is better)
Translates to: CTVLNHRSEQELLET*KEGLLHKNLLHIQR
Trigger: CCTCTGGATGTGCAGCAAGTTTTTATGCAATAAGCCTTCCTTTCAGGTCTCTAAAAGCTCCTGCTCTGATCTGTGGTTTAACACTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 90 bp GCTGAAATGCAGGAACATATTCAACTTTTTAATGTAAAAATCCTGTaGCGTTCCATGATGCACAGCTACAGAGTTCCTCCAGGGCATGGG +
Preference number: 1 (lower is better)
Translates to: AEMQEHIQLFNVKIL*RSMMHSYRVPPGHG
Trigger: CCCATGCCCTGGAGGAACTCTGTAGCTGTGCATCATGGAACGCCACAGGATTTTTACATTAAAAAGTTGAATATGTTCCTGCATTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 90 bp GTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTaGGCCTCCTTGAGAACATTAAGGGATGAATGTACGTATGCACAG +
Preference number: 1 (lower is better)
Translates to: VLYHLTAMLIIFWGS*ASLRTLRDECTYAQ
Trigger: CTGTGCATACGTACATTCATCCCTTAATGTTCTCAAGGAGGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 90 bp GCTTTGCTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTaGGGATCCTGGGCCTCCTTGAGAACATTAAGGGATGAATGTACG +
Preference number: 1 (lower is better)
Translates to: ALLVLYHLTAMLIIF*GSWASLRTLRDECT
Trigger: CGTACATTCATCCCTTAATGTTCTCAAGGAGGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAGCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 90 bp TATAATATTTTGGGGATCCTGGGCCTCCTTGAGAACATTAAGGGATaGATGTACGTATGCACAGCCTCACACTCTATAAATGTATGTGTC +
Preference number: 1 (lower is better)
Translates to: YNILGILGLLENIKG*MYVCTASHSINVCV
Trigger: GACACATACATTTATAGAGTGTGAGGCTGTGCATACGTACATTCATCCCTTAATGTTCTCAAGGAGGCCCAGGATCCCCAAAATATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 90 bp TATATGGAAAGGGATGAATGCTTTGCTAGTGCTATATCATCTGACTaGAATGCTTATAATATTTTGGGGATCCTGGGCCTCCTTGAGAAC +
Preference number: 1 (lower is better)
Translates to: YMERDECFASAISSD*NAYNILGILGLLEN
Trigger: GTTCTCAAGGAGGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAGCAAAGCATTCATCCCTTTCCATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 90 bp AGGTCCAAAATGATCAGAACAAGAATGACAACAGTGTCAACCAAATaGTGCCTCCAACTCCTTTTAATGATTGTGCCTTGGTACACATTT +
Preference number: 1 (lower is better)
Translates to: RSKMIRTRMTTVSTK*CLQLLLMIVPWYTF
Trigger: AAATGTGTACCAAGGCACAATCATTAAAAGGAGTTGGAGGCATCATTTGGTTGACACTGTTGTCATTCTTGTTCTGATCATTTTGGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 90 bp AAACTTCCTTCTTCCCCTCCCTCCTGTTATATGGAAAGGGATGAATaGTTTGCTAGTGCTATATCATCTGACTGCAATGCTTATAATATT +
Preference number: 1 (lower is better)
Translates to: KLPSSPPSCYMERDE*FASAISSDCNAYNI
Trigger: AATATTATAAGCATTGCAGTCAGATGATATAGCACTAGCAAAGCATTCATCCCTTTCCATATAACAGGAGGGAGGGGAAGAAGGAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 90 bp AAAGATATACTGAAACTCAAAAAGAATACTTCAGCTCGAGTTGAATaGAATTCAAGATGTTGTGGAGGGTTCAGTGGGTTGGTTATACCA +
Preference number: 1 (lower is better)
Translates to: KDILKLKKNTSARVE*NSRCCGGFSGLVIP
Trigger: TGGTATAACCAACCCACTGAACCCTCCACAACATCTTGAATTCCATTCAACTCGAGCTGAAGTATTCTTTTTGAGTTTCAGTATATCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp CTGGCTACTCAGGAGGCTAAGGTTGAAGCTCACTTGAGGCAAGGGGTTCAAGGCTGCCGTAACATAACGTaGCAGAGGAGTGGGGAGCGT +
Preference number: 2 (lower is better)
Translates to: LATQEAKVEAHLRQGVQGCRNIT*QRSGER
Trigger: ACGCTCCCCACTCCTCTGCCACGTTATGTTACGGCA...GCCTTGAACCCCTTGCCTCAAGTGAGCTTCAACCTTAGCCTCCTGAGTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 90 bp GTTACCTTGGCAACCGTGGCCCAATCACAGGGGCAGAAATTAATTTaGTGCCGTAACATAACGTGGCAGAGGAGTGGGGAGCGTGGAGTG +
Preference number: 2 (lower is better)
Translates to: VTLATVAQSQGQKLI*CRNITWQRSGERGV
Trigger: CACTCCACGCTCCCCACTCCTCTGCCACGTTATGTTACGGCACAAAATTAATTTCTGCCCCTGTGATTGGGCCACGGTTGCCAAGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR GCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTTCTCTCAGGAGTCACTaGTTGCCTCCACCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCSLRSH*LPPPLL
Trigger: CAGCAGAGGTGGAGGCAAGCAGTGACTCCTGAGAGA...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR GCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATGGGTGGTCCACCTCCTaGCCGCTCAGGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNGWSTS*PLRAPG
Trigger: TCCTGGTGCCCTGAGCGGGCAGGAGGTGGACCACCC...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTCCTTCTTTCACGTTGTaGTCTGCCTCGTCCACAGGT +
Preference number: 2 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCPSFTL*SASSTG
Trigger: ACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGG...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 90 bp ACCTCTCTGTGCCACTGTGCTGCATTCCCATCTGGTAACTGTGTATaGCAGAGGCTGGGACTTAGGGGCTCTTGTTTCTGTTCTCTGGAT +
Preference number: 2 (lower is better)
Translates to: TSLCHCAAFPSGNCV*QRLGLRGSCFCSLD
Trigger: ATCCAGAGAACAGAAACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGCAGCACAGTGGCACAGAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp TCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAATGAGTCATTTCAGCCAGGGTaGTCCACCTCCTGCCCGCTC +
Preference number: 2 (lower is better)
Translates to: SKFLPLNLALRLWVFGNESFQPG*STSCPL
Trigger: GAGCGGGCAGGAGGTGGACCACCCTGGCTGAAATGA...CTCATTTCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 90 bp GCTACAGGGAGCATACAAATCCTCACTTGCCCATGCTCTCACGTATaGCCTGCACATGGAAACTTCCTTCTTCCCCTCCCTCCTGTTATA +
Preference number: 2 (lower is better)
Translates to: ATGSIQILTCPCSHV*PAHGNFLLPLPPVI
Trigger: TATAACAGGAGGGAGGGGAAGAAGGAAGTTTCCATGTGCAGGCAATACGTGAGAGCATGGGCAAGTGAGGATTTGTATGCTCCCTGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTAGCACACAAAGTGAGTaGGGAATGTCTCTCAGGAGT +
Preference number: 2 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCSTQSE*GMSLRS
Trigger: ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCT...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTCCTCGTCCACAGGTCTaGGCTAGCAGCACTCAGAAG +
Preference number: 2 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPPRPQV*ASSTQK
Trigger: CTTCTGAGTGCTGCTAGCCCAGACCTGTGGACGAGG...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAGAACGGTCAAGGGGCTaGTCCTTCTTTCACGTTGTG +
Preference number: 2 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGERSRG*SFFHVV
Trigger: CACAACGTGAAAGAAGGACCAGCCCCTTGACCGTTC...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTGCAGAGGCTTCCTCGTaGACAATTCCCCAGCCAGAA +
Preference number: 2 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPAEASS*TIPQPE
Trigger: TTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGC...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAGAACTGTGCCATGTGTaGAAGTGCAGAGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGELCHV*KCRGFL
Trigger: GAGGAAGCCTCTGCACTTCCACACATGGCACAGTTC...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp CTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCCGTGAAGACCCTGTTTaGGGCAGAGACAAGCCACCC +
Preference number: 2 (lower is better)
Translates to: LVLYHLTAMLIIFWGSWAREDPV*GRDKPP
Trigger: GGGTGGCTTGTCTCTGCCCCAAACAGGGTCTTCACG...GGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTTACAAGTCAGCCGTCTaGGTGTTAAATCTACACGTA +
Preference number: 2 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCYKSAV*VLNLHV
Trigger: TACGTGTAGATTTAACACCCAGACGGCTGACTTGTA...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR TCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATCCTGCAGTTAGAACGTaGAGACCCTGTTTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNPAVRT*RPCLGQ
Trigger: CTGCCCCAAACAGGGTCTTCACGTTCTAACTGCAGG...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR TCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTCCACAGTTTTGTGAATaGATCAGAGAAGGCAACATT +
Preference number: 2 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCPQFCE*IREGNI
Trigger: AATGTTGCCTTCTCTGATTCATTCACAAAACTGTGG...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR GCA 90 bp CTGGCTACTCAGGAGGCTAAGGTTGAAGCTCACTTGAGGCAAGGGGTTCAAGGCTATGCACTGCTGAAATaGAGGAACATATTCAACTTT +
Preference number: 2 (lower is better)
Translates to: LATQEAKVEAHLRQGVQGYALLK*RNIFNF
Trigger: AAAGTTGAATATGTTCCTGCATTTCAGCAGTGCATA...GCCTTGAACCCCTTGCCTCAAGTGAGCTTCAACCTTAGCCTCCTGAGTAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 90 bp CAACAGAGAATGCCACTGTACCCACAGAGACAGCCCTTTCTTAGCTaGGACAAAGATTTCATGATTCTAGTCTTTTGTGGCAGCCACAGA +
Preference number: 2 (lower is better)
Translates to: QQRMPLYPQRQPFLS*DKDFMILVFCGSHR
Trigger: TCTGTGGCTGCCACAAAAGACTAGAATCATGAAATCTTTGTCCAAGCTAAGAAAGGGCTGTCTCTGTGGGTACAGTGGCATTCTCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR GCA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAATTTCACGTTGTGGTCTaGCTCGTCCACAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: TRQISGKIRTRISVSKPEFHVVV*LVHRSG
Trigger: CCCAGACCTGTGGACGAGGCAGACCACAACGTGAAA...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR GCA 90 bp ACAGGTGGTCAGAACCACCACAGTTTTGTGAATGAATCAGAGAAGGCAACATTTAGAGCTCCACAGCCCTaGACAGTGTTAAACCACAGA +
Preference number: 2 (lower is better)
Translates to: TGGQNHHSFVNESEKATFRAPQP*TVLNHR
Trigger: TCTGTGGTTTAACACTGTGCAGGGCTGTGGAGCTCT...AAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR GCA 90 bp CTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCGTAGTTACCTCTCTGTaGCACTGTGCTGCATTCCCA +
Preference number: 2 (lower is better)
Translates to: LVLYHLTAMLIIFWGSWAVVTSL*HCAAFP
Trigger: TGGGAATGCAGCACAGTGGCACAGAGAGGTAACTAC...GGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR GCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGACTCTCACGTATTGCCTaGACATGGAAACTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGLSRIA*TWKLPS
Trigger: AGAAGGAAGTTTCCATGTGCAGGCAATACGTGAGAG...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp CTGATCAGTCCTAATATCAGAAAAGAGACAAGTAGACATTATGTGCTTCCTGAGCCCCCTCGTCACAGGTaGTCAGAACCACCACAGTTT +
Preference number: 2 (lower is better)
Translates to: LISPNIRKETSRHYVLPEPPRHR*SEPPQF
Trigger: AAACTGTGGTGGTTCTGACCACCTGTGACGAGGGGG...CTCAGGAAGCACATAATGTCTACTTGTCTCTTTTCTGATATTAGGACTGATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 90 bp CATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCTCCTaGAGAACATTAAGGGATGAATGTACGTATGCACAGCCTCACACT +
Preference number: 2 (lower is better)
Translates to: HLTAMLIIFWGSWAS*RTLRDECTYAQPHT
Trigger: AGTGTGAGGCTGTGCATACGTACATTCATCCCTTAATGTTCTCAAGGAGGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp GTATTTCTCAATTACAGCCGTGTAAGACATTTTCTTCCTAATCATCTCTCCCTTTTACCTTGGCAACCGTaGCCCAATCACAGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: VFLNYSRVRHFLPNHLSLLPWQP*PNHRGR
Trigger: TCTGCCCCTGTGATTGGGCCACGGTTGCCAAGGTAA...AAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR TCA 90 bp CTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCATAATGTCAGTGTCATaGAAGACACACCACACACAC +
Preference number: 2 (lower is better)
Translates to: LVLYHLTAMLIIFWGSWAIMSVS*KTHHTH
Trigger: GTGTGTGTGGTGTGTCTTTCATGACACTGACATTAT...GGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR GCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATTATTTATTAGGGAAATaGTATGGACGCCTCGGCAGG +
Preference number: 2 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNYLLGK*YGRLGR
Trigger: CCTGCCGAGGCGTCCATAGCATTTCCCTAATAAATA...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp TCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATCATGCCCAACGCTCCCGCGACAAGACAGATAAGTaGAAAAATACGAACACGCAT +
Preference number: 2 (lower is better)
Translates to: SLSLIKNKHCSNHAQRSRDKTDK*KNTNTH
Trigger: ATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGTC...GCGGGAGCGTTGGGCATGATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR TCA 90 bp CTGATCAGTCCTAATATCAGAAAAGAGACAAGTAGACATTATGTGCTTCCTGAGTTGGATTCCGTGAGATaGCCTTTACGAGACACAAAG +
Preference number: 2 (lower is better)
Translates to: LISPNIRKETSRHYVLPELDSVR*PLRDTK
Trigger: CTTTGTGTCTCGTAAAGGTCATCTCACGGAATCCAA...CTCAGGAAGCACATAATGTCTACTTGTCTCTTTTCTGATATTAGGACTGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 90 bp TTCCTTCTTCCCCTCCCTCCTGTTATATGGAAAGGGATGAATGCTTaGCTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGG +
Preference number: 2 (lower is better)
Translates to: FLLPLPPVIWKGMNA*LVLYHLTAMLIIFW
Trigger: CCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAGCAAAGCATTCATCCCTTTCCATATAACAGGAGGGAGGGGAAGAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR TCA 90 bp GTATTTCTCAATTACAGCCGTGTAAGACATTTTCTTCCTAATCATCTCTCCCTTGAGAACATTAAGGGATaGATGTACGTATGCACAGCC +
Preference number: 2 (lower is better)
Translates to: VFLNYSRVRHFLPNHLSLENIKG*MYVCTA
Trigger: GGCTGTGCATACGTACATTCATCCCTTAATGTTCTC...AAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp GTATTTCTCAATTACAGCCGTGTAAGACATTTTCTTCCTAATCATCTCTCCCTTATATTTTGGGGATCCTaGGCCTCCTTGAGAACATTA +
Preference number: 2 (lower is better)
Translates to: VFLNYSRVRHFLPNHLSLIFWGS*ASLRTL
Trigger: TAATGTTCTCAAGGAGGCCCAGGATCCCCAAAATAT...AAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CCA 90 bp GTATTTCTCAATTACAGCCGTGTAAGACATTTTCTTCCTAATCATCTCTCCCTTATGCTTATAATATTTTaGGGATCCTGGGCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: VFLNYSRVRHFLPNHLSLMLIIF*GSWASL
Trigger: CAAGGAGGCCCAGGATCCCCAAAATATTATAAGCAT...AAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 72 bp GTAGGTGTGTCATTTCAGCCAGGGTGGTCCACCTCCTaGCCGCTCAGGGCACCAGGAGGAAACAGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: VGVSFQPGWSTS*PLRAPGGNSFP
Trigger: AGGAAAGCTGTTTCCTCCTGGTGCCCTGAGCGGGCAGGAGGTGGACCACCCTGGCTGAAATGACACACCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 72 bp CGGTCAAGGGGCTGGTCCTTCTTTCACGTTGTGGTCTaGCTCGTCCACAGGTCTGGGCTAGCAGCACTCAGA +
Preference number: 3 (lower is better)
Translates to: RSRGWSFFHVVV*LVHRSGLAALR
Trigger: TCTGAGTGCTGCTAGCCCAGACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCTTGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 72 bp GGCAGGTCACAGGCAGAACTGTGCCATGTGTGGAAGTaGAGAGGCTTCCTCGTGGACAATTCCCCAGCCAGA +
Preference number: 3 (lower is better)
Translates to: GRSQAELCHVWK*RGFLVDNSPAR
Trigger: TCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATGGCACAGTTCTGCCTGTGACCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 72 bp TCGTGGACAATTCCCCAGCCAGAACGGTCAAGGGGCTaGTCCTTCTTTCACGTTGTGGTCTGCCTCGTCCAC +
Preference number: 3 (lower is better)
Translates to: SWTIPQPERSRG*SFFHVVVCLVH
Trigger: GTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCTTGACCGTTCTGGCTGGGGAATTGTCCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 72 bp AACTGTGCCATGTGTGGAAGTGCAGAGGCTTCCTCGTaGACAATTCCCCAGCCAGAACGGTCAAGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: NCAMCGSAEASS*TIPQPERSRGW
Trigger: CCAGCCCCTTGACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATGGCACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 72 bp TTAGGCGGCAGGTCACAGGCAGAACTGTGCCATGTGTaGAAGTGCAGAGGCTTCCTCGTGGACAATTCCCCA +
Preference number: 3 (lower is better)
Translates to: LGGRSQAELCHV*KCRGFLVDNSP
Trigger: TGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATGGCACAGTTCTGCCTGTGACCTGCCGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 72 bp GTCTCTTCCCTGCAGTTAGAACGTGAAGACCCTGTTTaGGGCAGAGACAAGCCACCCCATGGAGTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: VSSLQLEREDPV*GRDKPPHGVSL
Trigger: CAGGGACACTCCATGGGGTGGCTTGTCTCTGCCCCAAACAGGGTCTTCACGTTCTAACTGCAGGGAAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp ACGCTAGTAACCAGTCTCTTCCCTGCAGTTAGAACGTaGAGACCCTGTTTGGGGCAGAGACAAGCCACCCCA +
Preference number: 3 (lower is better)
Translates to: TLVTSLFPAVRT*RPCLGQRQATP
Trigger: TGGGGTGGCTTGTCTCTGCCCCAAACAGGGTCTTCACGTTCTAACTGCAGGGAAGAGACTGGTTACTAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 72 bp TTCCTCCAGGGCATGGGCTCCGTAGTTACCTCTCTGTaGCACTGTGCTGCATTCCCATCTGGTAACTGTGTA +
Preference number: 3 (lower is better)
Translates to: FLQGMGSVVTSL*HCAAFPSGNCV
Trigger: TACACAGTTACCAGATGGGAATGCAGCACAGTGGCACAGAGAGGTAACTACGGAGCCCATGCCCTGGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 72 bp GTGGTCAACAATGGAGCAACAAGACTCCGTAGAGGATaGCACCCTGGGAGAATTGCAAGGGAAAGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: VVNNGATRLRRG*HPGRIARERRL
Trigger: CAGCCTCCTTTCCCTTGCAATTCTCCCAGGGTGGCATCCTCTACGGAGTCTTGTTGCTCCATTGTTGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CAA 90 bp GCTCCACAGCCCTGCACAGTGTTAAACCACAGATCAGAGCAGGAGCTTTTAGAGGGTCCTTCTTTCACGTaGTGGTCTGCCTCGTCCACA +
Preference number: 3 (lower is better)
Translates to: APQPCTVLNHRSEQELLEGPSFT*WSASST
Trigger: TGTGGACGAGGCAGACCACAACGTGAAAGAAGGACC...CTCTAAAAGCTCCTGCTCTGATCTGTGGTTTAACACTGTGCAGGGCTGTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CAA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTCATGATTCTAGTCTTTaGTGGCAGCCACAGAGGGCT +
Preference number: 3 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCHDSSL*WQPQRA
Trigger: AGCCCTCTGTGGCTGCCACAAAAGACTAGAATCATG...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp TCCTGGCTACTCAGGAGGCTAAGGTTGAAGCTCACTTaGGGCAAGGGGTTCAAGGCCAGCTTGGGTAAAATA +
Preference number: 3 (lower is better)
Translates to: SWLLRRLRLKLT*GKGFKASLGKI
Trigger: TATTTTACCCAAGCTGGCCTTGAACCCCTTGCCTCAAGTGAGCTTCAACCTTAGCCTCCTGAGTAGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 72 bp ACAAATCCTCACTTGCCCATGCTCTCACGTATTGCCTaGACATGGAAACTTCCTTCTTCCCCTCCCTCCTGT +
Preference number: 3 (lower is better)
Translates to: TNPHLPMLSRIA*TWKLPSSPPSC
Trigger: ACAGGAGGGAGGGGAAGAAGGAAGTTTCCATGTGCAGGCAATACGTGAGAGCATGGGCAAGTGAGGATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 72 bp AGCAGCACTCAGAAGGTTAAGAGCACACAAAGTGAGTaGGGAATGTCTCTCAGGAGTCACTGCTTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: SSTQKVKSTQSE*GMSLRSHCLPP
Trigger: TGGAGGCAAGCAGTGACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAACCTTCTGAGTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 72 bp CTGGCTACAGGGAGCATACAAATCCTCACTTGCCCATaGTCTCACGTATTGCCTGCACATGGAAACTTCCTT +
Preference number: 3 (lower is better)
Translates to: LATGSIQILTCP*SHVLPAHGNFL
Trigger: AAGGAAGTTTCCATGTGCAGGCAATACGTGAGAGCATGGGCAAGTGAGGATTTGTATGCTCCCTGTAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp TGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTaGATTCCAGTAAAGCTTAGGCGGCAGGTCACAGGC +
Preference number: 3 (lower is better)
Translates to: WKNTNTHLSLKT*IPVKLRRQVTG
Trigger: GCCTGTGACCTGCCGCCTAAGCTTTACTGGAATTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp TTCATGTTCACTGCTGGTCACAGCCATAACAGAGAGTaGTGTGGAGAGCTTTGGGAAGGTTTCACGTTGAGT +
Preference number: 3 (lower is better)
Translates to: FMFTAGHSHNRE*CGELWEGFTLS
Trigger: ACTCAACGTGAAACCTTCCCAAAGCTCTCCACATCACTCTCTGTTATGGCTGTGACCAGCAGTGAACATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CAA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGACATACAAATCCTCACTaGCCCATGCTCTCACGTATT +
Preference number: 3 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGHTNPH*PMLSRI
Trigger: AATACGTGAGAGCATGGGCAAGTGAGGATTTGTATG...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CAA 90 bp TCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAATGAGTGTACTTGTGATCCTTaGGAGGGTCACAACTCACTG +
Preference number: 3 (lower is better)
Translates to: SKFLPLNLALRLWVFGNECTCDP*EGHNSL
Trigger: CAGTGAGTTGTGACCCTCCAAAGGATCACAAGTACA...CTCATTTCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp CCCTCGTCACAGGTGGTCAGAACCACCACAGTTTTGTaGATGAATCAGAGAAGGCAACATTTCATCAACGAA +
Preference number: 3 (lower is better)
Translates to: PSSQVVRTTTVL*MNQRRQHFINE
Trigger: TTCGTTGATGAAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGTGACGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp TTGGGGATCCTGGGCCTCCTTGAGAACATTAAGGGATaGATGTACGTATGCACAGCCTCACACTCTATAAAT +
Preference number: 3 (lower is better)
Translates to: LGILGLLENIKG*MYVCTASHSIN
Trigger: ATTTATAGAGTGTGAGGCTGTGCATACGTACATTCATCCCTTAATGTTCTCAAGGAGGCCCAGGATCCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp GATGCCACCCTGGGAGAATTGCAAGGGAAAGGAGGCTaGAGCACAACTGGTAATAGCCTTCAGATATTTAAT +
Preference number: 3 (lower is better)
Translates to: DATLGELQGKGG*STTGNSLQIFN
Trigger: ATTAAATATCTGAAGGCTATTACCAGTTGTGCTTCAGCCTCCTTTCCCTTGCAATTCTCCCAGGGTGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 72 bp AGAGCTTTGGGAAGGTTTCACGTTGAGTTACATCAGTaGTCAACAATGGAGCAACAAGACTCCGTAGAGGAT +
Preference number: 3 (lower is better)
Translates to: RALGRFHVELHQ*STMEQQDSVED
Trigger: ATCCTCTACGGAGTCTTGTTGCTCCATTGTTGACCACTGATGTAACTCAACGTGAAACCTTCCCAAAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CAA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGACTAATCATCTCTCCCTaGCACCATCACCATGAAATT +
Preference number: 3 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGLIISP*HHHHEI
Trigger: AATTTCATGGTGATGGTGCAAGGGAGAGATGATTAG...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR GCA 72 bp AGACCTGAAAGGAAGGCTTATTGCATAAAAACTTGCTaGACATCCAGAGGTCCAAAATTCACCCGGCACTTA +
Preference number: 3 (lower is better)
Translates to: RPERKAYCIKTC*TSRGPKFTRHL
Trigger: TAAGTGCCGGGTGAATTTTGGACCTCTGGATGTGCAGCAAGTTTTTATGCAATAAGCCTTCCTTTCAGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp CGTCACAGGTGGTCAGAACCACCACAGTTTTGTGAATaGATCAGAGAAGGCAACATTTCATCAACGAAAACT +
Preference number: 3 (lower is better)
Translates to: RHRWSEPPQFCE*IREGNISSTKT
Trigger: AGTTTTCGTTGATGAAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGTGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 72 bp GTGCTATATCATCTGACTGCAATGCTTATAATATTTTaGGGATCCTGGGCCTCCTTGAGAACATTAAGGGAT +
Preference number: 3 (lower is better)
Translates to: VLYHLTAMLIIF*GSWASLRTLRD
Trigger: ATCCCTTAATGTTCTCAAGGAGGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 72 bp CTGAAACTCAAAAAGAATACTTCAGCTCGAGTTGAATaGAATTCAAGATGTTGTGGAGGGTTCAGTGGGTTG +
Preference number: 3 (lower is better)
Translates to: LKLKKNTSARVE*NSRCCGGFSGL
Trigger: CAACCCACTGAACCCTCCACAACATCTTGAATTCCATTCAACTCGAGCTGAAGTATTCTTTTTGAGTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp ATGATCAGAACAAGAATGACAACAGTGTCAACCAAATaGTGCCTCCAACTCCTTTTAATGATTGTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: MIRTRMTTVSTK*CLQLLLMIVPW
Trigger: CCAAGGCACAATCATTAAAAGGAGTTGGAGGCATCATTTGGTTGACACTGTTGTCATTCTTGTTCTGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CCA 72 bp CAGGAACATATTCAACTTTTTAATGTAAAAATCCTGTaGCGTTCCATGATGCACAGCTACAGAGTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: QEHIQLFNVKIL*RSMMHSYRVPP
Trigger: TGGAGGAACTCTGTAGCTGTGCATCATGGAACGCCACAGGATTTTTACATTAAAAAGTTGAATATGTTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CAA 90 bp GTATTTCTCAATTACAGCCGTGTAAGACATTTTCTTCCTAATCATCTCTCCCTTTTATTGCATAAAAACTaGCTGCACATCCAGAGGTCC +
Preference number: 3 (lower is better)
Translates to: VFLNYSRVRHFLPNHLSLLLHKN*LHIQRS
Trigger: GGACCTCTGGATGTGCAGCAAGTTTTTATGCAATAA...AAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp TATACTGAAACTCAAAAAGAATACTTCAGCTCGAGTTaGATGGAATTCAAGATGTTGTGGAGGGTTCAGTGG +
Preference number: 3 (lower is better)
Translates to: YTETQKEYFSSS*MEFKMLWRVQW
Trigger: CCACTGAACCCTCCACAACATCTTGAATTCCATTCAACTCGAGCTGAAGTATTCTTTTTGAGTTTCAGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR-3UTR CAA 90 bp GTATTTCTCAATTACAGCCGTGTAAGACATTTTCTTCCTAATCATCTCTCCCTTAAAGTATGTTTATTGTaGACCAGGGCACAGCAACAT +
Preference number: 3 (lower is better)
Translates to: VFLNYSRVRHFLPNHLSLKVCLL*TRAQQH
Trigger: ATGTTGCTGTGCCCTGGTCAACAATAAACATACTTT...AAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR TCA 72 bp GGAAGTTACTGGCATGGTTTGAGAGATAGAAGGAATTaGTTAAGAAACCTCTCAAAGTTTCTTCCACTTAAC +
Preference number: 3 (lower is better)
Translates to: GSYWHGLRDRRN*LRNLSKFLPLN
Trigger: GTTAAGTGGAAGAAACTTTGAGAGGTTTCTTAATCAATTCCTTCTATCTCTCAAACCATGCCAGTAACTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TCAAGGGGCTGGTCCTTCTTTCACGTTGTGGTCTGCCTCGTCCACAGGTCTGGGGGAGCAGCCCCCTCATaGACCCAGCGCGCCGCGCAG +
Preference number: 4 (lower is better)
Translates to: SRGWSFFHVVVCLVHRSGGAAPS*TQRAAQ
Trigger: CTGCGCGGCGCGCTGGGTGCATGAGGGGGCTGCTCC...CCCAGACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp CATGTGTGGAAGTGCAGAGGCTTCCTCGTGGACAATTCCCCAGCCAGAACGGTCGCGCCTGGCTCCAGCTaGAGCCGCCGTCGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: HVWKCRGFLVDNSPARTVAPGSS*SRRRSG
Trigger: TCCGGAGCGACGGCGGCTGCAGCTGGAGCCAGGCGC...GACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp TCAAGGGGCTGGTCCTTCTTTCACGTTGTGGTCTGCCTCGTCCACAGGTCTGGGGGTCCACACCCGAGTTaGGGGATGCCTGAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SRGWSFFHVVVCLVHRSGGPHPS*GMPEPV
Trigger: AACGGGCTCAGGCATCCCTCAACTCGGGTGTGGACC...CCCAGACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TCAAGGGGCTGGTCCTTCTTTCACGTTGTGGTCTGCCTCGTCCACAGGTCTGGGTCTCTCAGGAGTCACTaGTTGCCTCCACCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SRGWSFFHVVVCLVHRSGSLRSH*LPPPLL
Trigger: CAGCAGAGGTGGAGGCAAGCAGTGACTCCTGAGAGA...CCCAGACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CCACCTCTGCTGTTCCTGGGAGTAGGTGTGTCATTTCAGCCAGGGTGGTCCACCCCCCCTCGTCACAGGTaGTCAGAACCACCACAGTTT +
Preference number: 4 (lower is better)
Translates to: PPLLFLGVGVSFQPGWSTPPRHR*SEPPQF
Trigger: AAACTGTGGTGGTTCTGACCACCTGTGACGAGGGGG...GGTGGACCACCCTGGCTGAAATGACACACCTACTCCCAGGAACAGCAGAGGTGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp CATGTGTGGAAGTGCAGAGGCTTCCTCGTGGACAATTCCCCAGCCAGAACGGTCCCTGCAGTTAGAACGTaGAGACCCTGTTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HVWKCRGFLVDNSPARTVPAVRT*RPCLGQ
Trigger: CTGCCCCAAACAGGGTCTTCACGTTCTAACTGCAGG...GACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp CATGTGTGGAAGTGCAGAGGCTTCCTCGTGGACAATTCCCCAGCCAGAACGGTCTTTCACGTTGTGGTCTaGCTCGTCCACAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: HVWKCRGFLVDNSPARTVFHVVV*LVHRSG
Trigger: CCCAGACCTGTGGACGAGGCAGACCACAACGTGAAA...GACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTTCTGGTCCTCCCCACTaGGCAACTGCACAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCSGPPH*ATAQPP
Trigger: AGGCGGCTGTGCAGTTGCCCAGTGGGGAGGACCAGA...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp TCAAGGGGCTGGTCCTTCTTTCACGTTGTGGTCTGCCTCGTCCACAGGTCTGGGAGAAGGTTCATGTACTaGGGAGCTGGCAGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRGWSFFHVVVCLVHRSGRRFMY*GAGSAV
Trigger: AACAGCGCTGCCAGCTCCCCAGTACATGAACCTTCT...CCCAGACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CATGTGTGGAAGTGCAGAGGCTTCCTCGTGGACAATTCCCCAGCCAGAACGGTCGCAGAGGCTTCCTCGTaGACAATTCCCCAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: HVWKCRGFLVDNSPARTVAEASS*TIPQPE
Trigger: TTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGC...GACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CTGGCTACTCAGGAGGCTAAGGTTGAAGCTCACTTGAGGCAAGGGGTTCAAGGCGCTCCACTGTTACCTTaGCAACCGTGGCCCAATCAC +
Preference number: 4 (lower is better)
Translates to: LATQEAKVEAHLRQGVQGAPLLP*QPWPNH
Trigger: GTGATTGGGCCACGGTTGCCAAGGTAACAGTGGAGC...GCCTTGAACCCCTTGCCTCAAGTGAGCTTCAACCTTAGCCTCCTGAGTAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp CTGGCTACTCAGGAGGCTAAGGTTGAAGCTCACTTGAGGCAAGGGGTTCAAGGCGGAGTGGGGAGAGAATaGCGGCTGGGTTTAAATGCT +
Preference number: 4 (lower is better)
Translates to: LATQEAKVEAHLRQGVQGGVGRE*RLGLNA
Trigger: AGCATTTAAACCCAGCCGTCATTCTCTCCCCACTCC...GCCTTGAACCCCTTGCCTCAAGTGAGCTTCAACCTTAGCCTCCTGAGTAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp CCACCTCTGCTGTTCCTGGGAGTAGGTGTGTCATTTCAGCCAGGGTGGTCCACCAGCCATAACAGAGAGTaGTGTGGAGAGCTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: PPLLFLGVGVSFQPGWSTSHNRE*CGELWE
Trigger: TTCCCAAAGCTCTCCACATCACTCTCTGTTATGGCT...GGTGGACCACCCTGGCTGAAATGACACACCTACTCCCAGGAACAGCAGAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp CTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCCCACGCAAGGGACTCTaGCGCCGGTGCGCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LVLYHLTAMLIIFWGSWAPRKGL*RRCARS
Trigger: GGACCTCGCGCACCGGCGGCAGAGTCCCTTGCGTGG...GGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAATGAGGGGTGGTCCACCTCCTaGCCGCTCAGGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SKFLPLNLALRLWVFGNEGWSTS*PLRAPG
Trigger: TCCTGGTGCCCTGAGCGGGCAGGAGGTGGACCACCC...CTCATTTCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp TCATTTCAGCCAGGGTGGTCCACCTCCTGCCCGCTCAGGGCACCAGGAGGAAACTACTTCAGCTCGAGTTaGATGGAATTCAAGATGTTG +
Preference number: 4 (lower is better)
Translates to: SFQPGWSTSCPLRAPGGNYFSSS*MEFKML
Trigger: CAACATCTTGAATTCCATTCAACTCGAGCTGAAGTA...GTTTCCTCCTGGTGCCCTGAGCGGGCAGGAGGTGGACCACCCTGGCTGAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp CATGTGTGGAAGTGCAGAGGCTTCCTCGTGGACAATTCCCCAGCCAGAACGGTCCATGCTCTCACGTATTaGCTGCACATGGAAACTTCC +
Preference number: 4 (lower is better)
Translates to: HVWKCRGFLVDNSPARTVHALTY*LHMETS
Trigger: GGAAGTTTCCATGTGCAGGCAATACGTGAGAGCATG...GACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CATGTGTGGAAGTGCAGAGGCTTCCTCGTGGACAATTCCCCAGCCAGAACGGTCAGCTGGCAGCGCTGTTaGCTTCTTATACTTGAGATC +
Preference number: 4 (lower is better)
Translates to: HVWKCRGFLVDNSPARTVSWQRC*LLILEI
Trigger: GATCTCAAGTATAAGAAGCCAACAGCGCTGCCAGCT...GACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTTTACCTTGGCAACCGTaGCCCAATCACAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCLPWQP*PNHRGR
Trigger: TCTGCCCCTGTGATTGGGCCACGGTTGCCAAGGTAA...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp TCATTTCAGCCAGGGTGGTCCACCTCCTGCCCGCTCAGGGCACCAGGAGGAAACGAACTTGATAATGATTaGATCAGGCAGACAACACCT +
Preference number: 4 (lower is better)
Translates to: SFQPGWSTSCPLRAPGGNELDND*IRQTTP
Trigger: AGGTGTTGTCTGCCTGATCCAATCATTATCAAGTTC...GTTTCCTCCTGGTGCCCTGAGCGGGCAGGAGGTGGACCACCCTGGCTGAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 72 bp GCAACCGTGGCCCAATCACAGGGGCAGAAATTAATTTaGTGCCGTAACATAACGTGGCAGAGGAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ATVAQSQGQKLI*CRNITWQRSGE
Trigger: CTCCCCACTCCTCTGCCACGTTATGTTACGGCACAAAATTAATTTCTGCCCCTGTGATTGGGCCACGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp AGCACTCAGAAGGTTAAGAGCACACAAAGTGAGTGGGGAATGTCTCTCAGGAGTCTGCACCCATCACAATaGCCCGGTCGAAGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: STQKVKSTQSEWGMSLRSLHPSQ*PGRSGG
Trigger: TCCACCACTTCGACCGGGTCATTGTGATGGGTGCAG...ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAACCTTCTGAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp GCTCCACAGCCCTGCACAGTGTTAAACCACAGATCAGAGCAGGAGCTTTTAGAGAACAGTGTTTTCCACTaGCAGCACTCAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: APQPCTVLNHRSEQELLENSVFH*QHSGPS
Trigger: ACTGGGGCCTGAGTGCTGGCAGTGGAAAACACTGTT...CTCTAAAAGCTCCTGCTCTGATCTGTGGTTTAACACTGTGCAGGGCTGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTTCCCCACTGGGCAACTaGACAGCCGCCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPSPLGN*TAAFRS
Trigger: GGACCTGAAGGCGGCTGTGCAGTTGCCCAGTGGGGA...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CTGGCTACTCAGGAGGCTAAGGTTGAAGCTCACTTGAGGCAAGGGGTTCAAGGCTTCCAAAGGGTGAGGTaGAGCATTAGTGACACATCC +
Preference number: 4 (lower is better)
Translates to: LATQEAKVEAHLRQGVQGFQRVR*SISDTS
Trigger: GGATGTGTCACTAATGCTCCACCTCACCCTTTGGAA...GCCTTGAACCCCTTGCCTCAAGTGAGCTTCAACCTTAGCCTCCTGAGTAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp GCTCCACAGCCCTGCACAGTGTTAAACCACAGATCAGAGCAGGAGCTTTTAGAGCCTTCTTTCACGTTGTaGTCTGCCTCGTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: APQPCTVLNHRSEQELLEPSFTL*SASSTG
Trigger: ACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGG...CTCTAAAAGCTCCTGCTCTGATCTGTGGTTTAACACTGTGCAGGGCTGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CCACCTCTGCTGTTCCTGGGAGTAGGTGTGTCATTTCAGCCAGGGTGGTCCACCTGTGCCAAAGTTCTGTaGGAACAGGAATATTCTGTG +
Preference number: 4 (lower is better)
Translates to: PPLLFLGVGVSFQPGWSTCAKVL*EQEYSV
Trigger: CACAGAATATTCCTGTTCCCACAGAACTTTGGCACA...GGTGGACCACCCTGGCTGAAATGACACACCTACTCCCAGGAACAGCAGAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp AAGGCTAGTGGGGAGGGTTACAAGTCAGCCGTCTGGGTGTTAAATCTACACGTATCCTGTGGCGTTCCATaGTGCACAGCTACAGAGTTC +
Preference number: 4 (lower is better)
Translates to: KASGEGYKSAVWVLNLHVSCGVP*CTATEF
Trigger: GAACTCTGTAGCTGTGCATCATGGAACGCCACAGGA...TACGTGTAGATTTAACACCCAGACGGCTGACTTGTAACCCTCCCCACTAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAGACAGGTCCGCTCGGTaGAGAACTCACAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGDRSAR*RTHRWC
Trigger: GCACCATCTGTGAGTTCTGCACCGAGCGGACCTGTC...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp AAGGCTAGTGGGGAGGGTTACAAGTCAGCCGTCTGGGTGTTAAATCTACACGTAAGACTCCGTAGAGGATaGCACCCTGGGAGAATTGCA +
Preference number: 4 (lower is better)
Translates to: KASGEGYKSAVWVLNLHVRLRRG*HPGRIA
Trigger: TGCAATTCTCCCAGGGTGGCATCCTCTACGGAGTCT...TACGTGTAGATTTAACACCCAGACGGCTGACTTGTAACCCTCCCCACTAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp TCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATCATGCCCAACGCTCCCGCCCTCGTCCACAGGTCTaGGCTAGCAGCACTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SLSLIKNKHCSNHAQRSRPRPQV*ASSTQK
Trigger: CTTCTGAGTGCTGCTAGCCCAGACCTGTGGACGAGG...GCGGGAGCGTTGGGCATGATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGACGTGAAGACCCTGTTTaGGGCAGAGACAAGCCACCC +
Preference number: 4 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGREDPV*GRDKPP
Trigger: GGGTGGCTTGTCTCTGCCCCAAACAGGGTCTTCACG...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 72 bp TGCCACTGTGCTGCATTCCCATCTGGTAACTGTGTATaGCAGAGGCTGGGACTTAGGGGCTCTTGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CHCAAFPSGNCV*QRLGLRGSCFC
Trigger: ACAGAAACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGCAGCACAGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp AAGGCTAGTGGGGAGGGTTACAAGTCAGCCGTCTGGGTGTTAAATCTACACGTAGTGAGAAAGAAAATGTaGGGCAGGTGCGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: KASGEGYKSAVWVLNLHVVRKKM*GRCGGT
Trigger: TGTACCACCGCACCTGCCTCACATTTTCTTTCTCAC...TACGTGTAGATTTAACACCCAGACGGCTGACTTGTAACCCTCCCCACTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTGGGAAGGTTTCACGTTaGGTTACATCAGTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCGKVSR*VTSVVN
Trigger: GTTGACCACTGATGTAACTCAACGTGAAACCTTCCC...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp AGCACTCAGAAGGTTAAGAGCACACAAAGTGAGTGGGGAATGTCTCTCAGGAGTGTCCACCACATGTACTaGCACCCAGTCATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: STQKVKSTQSEWGMSLRSVHHMY*HPVILV
Trigger: GACCAGAATGACTGGGTGGCAGTACATGTGGTGGAC...ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAACCTTCTGAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TCAAGGGGCTGGTCCTTCTTTCACGTTGTGGTCTGCCTCGTCCACAGGTCTGGGCAGAAATTAATTTTGTaGCGTAACATAACGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SRGWSFFHVVVCLVHRSGQKLIL*RNITWQ
Trigger: CTGCCACGTTATGTTACGGCACAAAATTAATTTCTG...CCCAGACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTAAGCAAGGTTCAGGCTaGTTGGTTAGGTCAACAGAG +
Preference number: 4 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCKQGSG*LVRSTE
Trigger: CTCTGTTGACCTAACCAAGCAGCCTGAACCTTGCTT...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp AAGGCTAGTGGGGAGGGTTACAAGTCAGCCGTCTGGGTGTTAAATCTACACGTAATCCTCACTTGCCCATaGTCTCACGTATTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KASGEGYKSAVWVLNLHVILTCP*SHVLPA
Trigger: TGCAGGCAATACGTGAGAGCATGGGCAAGTGAGGAT...TACGTGTAGATTTAACACCCAGACGGCTGACTTGTAACCCTCCCCACTAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 72 bp AGCATACAAATCCTCACTTGCCCATGCTCTCACGTATaGCCTGCACATGGAAACTTCCTTCTTCCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SIQILTCPCSHV*PAHGNFLLPLP
Trigger: AGGGAGGGGAAGAAGGAAGTTTCCATGTGCAGGCAATACGTGAGAGCATGGGCAAGTGAGGATTTGTATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp ACAGGTGGTCAGAACCACCACAGTTTTGTGAATGAATCAGAGAAGGCAACATTTGAGTTGAGGGATGCCTaGGCCCGTTTGTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TGGQNHHSFVNESEKATFELRDA*ARLCSS
Trigger: TGAGCTGCACAAACGGGCTCAGGCATCCCTCAACTC...AAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp CTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCATATTTGGGGCCCCCTaGCATCACAGGACAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LVLYHLTAMLIIFWGSWAIFGAP*HHRTGP
Trigger: CGGACCTGTCCTGTGATGTCAGGGGGCCCCAAATAT...GGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTTTGGCTTCTTATACTTaGGATCATCCTGCCACCGAT +
Preference number: 4 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCLASYT*DHPATD
Trigger: ATCGGTGGCAGGATGATCTCAAGTATAAGAAGCCAA...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATAGGTGGGGCGTCGCTTaGCAATCCACGCAAGGGACT +
Preference number: 4 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNRWGVA*QSTQGT
Trigger: AGTCCCTTGCGTGGATTGGCAAGCGACGCCCCACCT...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp GCTCCACAGCCCTGCACAGTGTTAAACCACAGATCAGAGCAGGAGCTTTTAGAGGCTCAAACCTCTGTGTaGCAGGTTCAAATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: APQPCTVLNHRSEQELLEAQTSV*QVQISS
Trigger: AGAGGAAATTTGAACCTGGCACACAGAGGTTTGAGC...CTCTAAAAGCTCCTGCTCTGATCTGTGGTTTAACACTGTGCAGGGCTGTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp ACAGGTGGTCAGAACCACCACAGTTTTGTGAATGAATCAGAGAAGGCAACATTTACCCGAGTTGAGGGATaGCTGAGCCCGTTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: TGGQNHHSFVNESEKATFTRVEG*LSPFVQ
Trigger: CTGCACAAACGGGCTCAGGCATCCCTCAACTCGGGT...AAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp GCTCCACAGCCCTGCACAGTGTTAAACCACAGATCAGAGCAGGAGCTTTTAGAGGGCACAGGATCTTCTTaGAGATCTGAAGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: APQPCTVLNHRSEQELLEGTGSS*RSEGSS
Trigger: AGAACTTCCTTCAGATCTGCAAGAAGATCCTGTGCC...CTCTAAAAGCTCCTGCTCTGATCTGTGGTTTAACACTGTGCAGGGCTGTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp GCTCCACAGCCCTGCACAGTGTTAAACCACAGATCAGAGCAGGAGCTTTTAGAGCTCTCACGTATTGCCTaGACATGGAAACTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: APQPCTVLNHRSEQELLELSRIA*TWKLPS
Trigger: AGAAGGAAGTTTCCATGTGCAGGCAATACGTGAGAG...CTCTAAAAGCTCCTGCTCTGATCTGTGGTTTAACACTGTGCAGGGCTGTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp AAGGCTAGTGGGGAGGGTTACAAGTCAGCCGTCTGGGTGTTAAATCTACACGTATCAGGGCTATGGACATaGTCTTCTCTTTCGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KASGEGYKSAVWVLNLHVSGLWT*SSLSLP
Trigger: AGGAAGCGAAAGAGAAGACCATGTCCATAGCCCTGA...TACGTGTAGATTTAACACCCAGACGGCTGACTTGTAACCCTCCCCACTAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTGATTCTAGTCTTTTGTaGCAGCCACAGAGGGCTTTA +
Preference number: 4 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCDSSLL*QPQRAL
Trigger: TAAAGCCCTCTGTGGCTGCCACAAAAGACTAGAATC...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATAGGGTTGTCAGTCTCTaGCCCAGAGGGCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNRVVSL*PRGLKL
Trigger: GAGCTTCAGCCCTCTGGGTCAGAGACTGACAACCCT...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp CTGGCTACTCAGGAGGCTAAGGTTGAAGCTCACTTGAGGCAAGGGGTTCAAGGCAACAGGCGAATTATTTaGTTAGAAATGGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: LATQEAKVEAHLRQGVQGNRRII*LEMDSS
Trigger: GGAAGAGTCCATTTCTAATCAAATAATTCGCCTGTT...GCCTTGAACCCCTTGCCTCAAGTGAGCTTCAACCTTAGCCTCCTGAGTAGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAGAGCTCCACAGCCCTaGACAGTGTTAAACCACAGA +
Preference number: 4 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGRAPQP*TVLNHR
Trigger: TCTGTGGTTTAACACTGTGCAGGGCTGTGGAGCTCT...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGACTCATGTTCTTTCCGTaGGGTTTTACCTCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGLMFFP*GFTSSP
Trigger: TGGGCTGGAGGTAAAACCCCACGGAAAGAACATGAG...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAACCGATACTCATATTTaGGGCCCCCTGACATCACAG +
Preference number: 4 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGTDTHI*GPLTSQ
Trigger: CTGTGATGTCAGGGGGCCCCAAATATGAGTATCGGT...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CTGATCAGTCCTAATATCAGAAAAGAGACAAGTAGACATTATGTGCTTCCTGAGTCATTTCAGCCAGGGTaGTCCACCTCCTGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LISPNIRKETSRHYVLPESFQPG*STSCPL
Trigger: GAGCGGGCAGGAGGTGGACCACCCTGGCTGAAATGA...CTCAGGAAGCACATAATGTCTACTTGTCTCTTTTCTGATATTAGGACTGATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGACTTTCTTCCAAAGGGTaGGGTGGAGCATTAGTGACA +
Preference number: 4 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGLSSKG*GGALVT
Trigger: TGTCACTAATGCTCCACCTCACCCTTTGGAAGAAAG...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp AAGGCTAGTGGGGAGGGTTACAAGTCAGCCGTCTGGGTGTTAAATCTACACGTAAAGTATGTTTATTGTTaGCCAGGGCACAGCAACATG +
Preference number: 4 (lower is better)
Translates to: KASGEGYKSAVWVLNLHVKYVYC*PGHSNM
Trigger: CATGTTGCTGTGCCCTGGTCAACAATAAACATACTT...TACGTGTAGATTTAACACCCAGACGGCTGACTTGTAACCCTCCCCACTAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp TCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATCATGCCCAACGCTCCCGCATGTGCTTCCTGAGGTaGGGCAGTAGTAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: SLSLIKNKHCSNHAQRSRMCFLR*GSSKET
Trigger: TGTTTCCTTACTACTGCCTCACCTCAGGAAGCACAT...GCGGGAGCGTTGGGCATGATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp TCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATCATGCCCAACGCTCCCGCACATTATGTGCTTCCTaGGGTGAGGCAGTAGTAAGG +
Preference number: 4 (lower is better)
Translates to: SLSLIKNKHCSNHAQRSRTLCAS*GEAVVR
Trigger: CCTTACTACTGCCTCACCTCAGGAAGCACATAATGT...GCGGGAGCGTTGGGCATGATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAACTTCGCCGGGTCAGCTaGAGCCAGCGCGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TRQISGKIRTRISVSKPELRRVS*SQRERK
Trigger: TTTTCTTTCGCGCTGGCTGCAGCTGACCCGGCGAAG...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATCATGCCCAACGCTCCCGCTCGCTTCCTTTCTTTTaGAGGAAGCGAAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: SLSLIKNKHCSNHAQRSRSLPFF*RKRKGT
Trigger: GGTGCCTTTTCGCTTCCTGCAAAAGAAAGGAAGCGA...GCGGGAGCGTTGGGCATGATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATGTTGACATGGGCCTCTaGACCCATCACAATGACCCG +
Preference number: 4 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNVDMGL*THHNDP
Trigger: CGGGTCATTGTGATGGGTGCAGAGGCCCATGTCAAC...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTCTGAAGGAAGTTCTTTaGGAAGGGAACACCCACGCA +
Preference number: 4 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPLKEVL*EGNTHA
Trigger: TGCGTGGGTGTTCCCTTCCCAAAGAACTTCCTTCAG...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp ACAGGTGGTCAGAACCACCACAGTTTTGTGAATGAATCAGAGAAGGCAACATTTGAACGGTCAAGGGGCTaGTCCTTCTTTCACGTTGTG +
Preference number: 4 (lower is better)
Translates to: TGGQNHHSFVNESEKATFERSRG*SFFHVV
Trigger: CACAACGTGAAAGAAGGACCAGCCCCTTGACCGTTC...AAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp AGCACTCAGAAGGTTAAGAGCACACAAAGTGAGTGGGGAATGTCTCTCAGGAGTAAGGTTCAGGCTGCTTaGTTAGGTCAACAGAGAATG +
Preference number: 4 (lower is better)
Translates to: STQKVKSTQSEWGMSLRSKVQAA*LGQQRM
Trigger: CATTCTCTGTTGACCTAACCAAGCAGCCTGAACCTT...ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAACCTTCTGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp TCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAATGAGGTGTATTGCAGAGGCTaGGACTTAGGGGCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SKFLPLNLALRLWVFGNEVYCRG*DLGALV
Trigger: AACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACAC...CTCATTTCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp AAGGCTAGTGGGGAGGGTTACAAGTCAGCCGTCTGGGTGTTAAATCTACACGTAAATGTAAAAATCCTGTaGCGTTCCATGATGCACAGC +
Preference number: 4 (lower is better)
Translates to: KASGEGYKSAVWVLNLHVNVKIL*RSMMHS
Trigger: GCTGTGCATCATGGAACGCCACAGGATTTTTACATT...TACGTGTAGATTTAACACCCAGACGGCTGACTTGTAACCCTCCCCACTAGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp AGCACTCAGAAGGTTAAGAGCACACAAAGTGAGTGGGGAATGTCTCTCAGGAGTGAATTCAAGATGTTGTaGAGGGTTCAGTGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: STQKVKSTQSEWGMSLRSEFKML*RVQWVG
Trigger: ACCAACCCACTGAACCCTCCACAACATCTTGAATTC...ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAACCTTCTGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp ACAGGTGGTCAGAACCACCACAGTTTTGTGAATGAATCAGAGAAGGCAACATTTCACTTAACCTGGCTCTaGGACTCTGGGTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TGGQNHHSFVNESEKATFHLTWL*DSGSLE
Trigger: TTCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTG...AAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTCCTCCTGCTCGATTATaGACTGCTGAAATGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPPPARL*TAEMQE
Trigger: TTCCTGCATTTCAGCAGTGCATAATCGAGCAGGAGG...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTAGCACACAAAGTGAGTaGGGAATGTCTCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPSTQSE*GMSLRS
Trigger: ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCT...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATGAACTGTGCCATGTGTaGAAGTGCAGAGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNELCHV*KCRGFL
Trigger: GAGGAAGCCTCTGCACTTCCACACATGGCACAGTTC...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTAGACAAGCCACCCCATaGAGTGTCCCTGATAAAACT +
Preference number: 4 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPRQATP*SVPDKT
Trigger: AGTTTTATCAGGGACACTCCATGGGGTGGCTTGTCT...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp AGCACTCAGAAGGTTAAGAGCACACAAAGTGAGTGGGGAATGTCTCTCAGGAGTATGCTTATAATATTTTaGGGATCCTGGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: STQKVKSTQSEWGMSLRSMLIIF*GSWASL
Trigger: CAAGGAGGCCCAGGATCCCCAAAATATTATAAGCAT...ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAACCTTCTGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGACTGGCTCTGAGACTCTaGGTCTTTGGAAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGLALRL*VFGNEK
Trigger: TTTCTCATTTCCAAAGACCCAGAGTCTCAGAGCCAG...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTAGCAATTGGATTCCGTaGGATGACCTTTACGAGACA +
Preference number: 4 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPSNWIP*DDLYET
Trigger: TGTCTCGTAAAGGTCATCTCACGGAATCCAATTGCT...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATTCACAGGCAGAACTGTaGCATGTGTGGAAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNSQAEL*HVWKCR
Trigger: TCTGCACTTCCACACATGGCACAGTTCTGCCTGTGA...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp AGCACTCAGAAGGTTAAGAGCACACAAAGTGAGTGGGGAATGTCTCTCAGGAGTTGCATAAAAACTTGCTaGACATCCAGAGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: STQKVKSTQSEWGMSLRSCIKTC*TSRGPK
Trigger: TTTTGGACCTCTGGATGTGCAGCAAGTTTTTATGCA...ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAACCTTCTGAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp TCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATCATGCCCAACGCTCCCGCTGTTTTCTCCCAGTGTaGTACTCATGGAGTATGGAA +
Preference number: 4 (lower is better)
Translates to: SLSLIKNKHCSNHAQRSRCFLPV*YSWSME
Trigger: TTCCATACTCCATGAGTACCACACTGGGAGAAAACA...GCGGGAGCGTTGGGCATGATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 72 bp ATGCCACTGTACCCACAGAGACAGCCCTTTCTTAGCTaGGACAAAGATTTCATGATTCTAGTCTTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: MPLYPQRQPFLS*DKDFMILVFCG
Trigger: GCCACAAAAGACTAGAATCATGAAATCTTTGTCCAAGCTAAGAAAGGGCTGTCTCTGTGGGTACAGTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp TCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAATGAGATCTTCTTGCAGATCTaGAGGAAGTTCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SKFLPLNLALRLWVFGNEIFLQI*RKFFGK
Trigger: CTTCCCAAAGAACTTCCTTCAGATCTGCAAGAAGAT...CTCATTTCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGATTCTCTGGATCTCTGTaGTGGTCAGATATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGFSGSL*WSDILL
Trigger: CAAAAGAATATCTGACCATCACAGAGATCCAGAGAA...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp CTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCTCCTTGTTGAATACCTaGTTCAGGGCTATGGACATG +
Preference number: 4 (lower is better)
Translates to: LVLYHLTAMLIIFWGSWASLLNT*FRAMDM
Trigger: CATGTCCATAGCCCTGAAGCAGGTATTCAACAAGGA...GGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATCATGCCCAACGCTCCCGCATAAAGAACAAACACTaGAGTAATCATGCCCAACGC +
Preference number: 4 (lower is better)
Translates to: SLSLIKNKHCSNHAQRSRIKNKH*SNHAQR
Trigger: GCGTTGGGCATGATTACTGCAGTGTTTGTTCTTTAT...GCGGGAGCGTTGGGCATGATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAAGTAGTTACCTCTCTGTaGCACTGTGCTGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: TRQISGKIRTRISVSKPEVVTSL*HCAAFP
Trigger: TGGGAATGCAGCACAGTGGCACAGAGAGGTAACTAC...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTCACCAAGGAAGTTACTaGCATGGTTTGAGAGATAGA +
Preference number: 4 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPHQGSY*HGLRDR
Trigger: TCTATCTCTCAAACCATGCCAGTAACTTCCTTGGTG...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 72 bp GCAATGCTTATAATATTTTGGGGATCCTGGGCCTCCTaGAGAACATTAAGGGATGAATGTACGTATGCACAG +
Preference number: 4 (lower is better)
Translates to: AMLIIFWGSWAS*RTLRDECTYAQ
Trigger: CTGTGCATACGTACATTCATCCCTTAATGTTCTCAAGGAGGCCCAGGATCCCCAAAATATTATAAGCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAAAAATTGGAAAGGATaGAAGAAGGAAGTTAGCTCC +
Preference number: 4 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGKNWKG*KKEVSS
Trigger: GGAGCTAACTTCCTTCTTTCATCCTTTCCAATTTTT...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATTTGGATTCCGTGAGATaGCCTTTACGAGACACAAAG +
Preference number: 4 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNLDSVR*PLRDTK
Trigger: CTTTGTGTCTCGTAAAGGTCATCTCACGGAATCCAA...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATGAGAACATTAAGGGATaGATGTACGTATGCACAGCC +
Preference number: 4 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNENIKG*MYVCTA
Trigger: GGCTGTGCATACGTACATTCATCCCTTAATGTTCTC...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp GTATTTCTCAATTACAGCCGTGTAAGACATTTTCTTCCTAATCATCTCTCCCTTCAAGGGAAAGGAGGCTaGAGCACAACTGGTAATAGC +
Preference number: 4 (lower is better)
Translates to: VFLNYSRVRHFLPNHLSLQGKGG*STTGNS
Trigger: GCTATTACCAGTTGTGCTTCAGCCTCCTTTCCCTTG...AAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATCATGCCCAACGCTCCCGCGGATGTAGTACAGAATaGATTATTCTGACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLSLIKNKHCSNHAQRSRGCSTE*IILTVF
Trigger: GAAGACAGTCAGAATAATGCATTCTGTACTACATCC...GCGGGAGCGTTGGGCATGATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp AGCACTCAGAAGGTTAAGAGCACACAAAGTGAGTGGGGAATGTCTCTCAGGAGTTATGCACTGCTGAAATaGAGGAACATATTCAACTTT +
Preference number: 4 (lower is better)
Translates to: STQKVKSTQSEWGMSLRSYALLK*RNIFNF
Trigger: AAAGTTGAATATGTTCCTGCATTTCAGCAGTGCATA...ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAACCTTCTGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCATATTTTGGGGATCCTaGGCCTCCTTGAGAACATTA +
Preference number: 4 (lower is better)
Translates to: LVLYHLTAMLIIFWGSWAIFWGS*ASLRTL
Trigger: TAATGTTCTCAAGGAGGCCCAGGATCCCCAAAATAT...GGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 72 bp AGTGCTATATCATCTGACTGCAATGCTTATAATATTTaGGGGATCCTGGGCCTCCTTGAGAACATTAAGGGA +
Preference number: 4 (lower is better)
Translates to: SAISSDCNAYNI*GILGLLENIKG
Trigger: TCCCTTAATGTTCTCAAGGAGGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp CTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCCCACAGTTTTGTGAATaGATCAGAGAAGGCAACATT +
Preference number: 4 (lower is better)
Translates to: LVLYHLTAMLIIFWGSWAPQFCE*IREGNI
Trigger: AATGTTGCCTTCTCTGATTCATTCACAAAACTGTGG...GGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp ACAGGTGGTCAGAACCACCACAGTTTTGTGAATGAATCAGAGAAGGCAACATTTTCGATTATGCACTGCTaGAATGCAGGAACATATTCA +
Preference number: 4 (lower is better)
Translates to: TGGQNHHSFVNESEKATFSIMHC*NAGTYS
Trigger: TGAATATGTTCCTGCATTTCAGCAGTGCATAATCGA...AAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATATAATGTCAGTGTCATaGAAGACACACCACACACAC +
Preference number: 4 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNIMSVS*KTHHTH
Trigger: GTGTGTGTGGTGTGTCTTTCATGACACTGACATTAT...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp CTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCGTTACTGGCATGGTTTaGGAGATAGAAGGAATTGAT +
Preference number: 4 (lower is better)
Translates to: LVLYHLTAMLIIFWGSWAVTGMV*EIEGID
Trigger: ATCAATTCCTTCTATCTCTCAAACCATGCCAGTAAC...GGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAATATTTATTAGGGAAATaGTATGGACGCCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: TRQISGKIRTRISVSKPEYLLGK*YGRLGR
Trigger: CCTGCCGAGGCGTCCATAGCATTTCCCTAATAAATA...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTGACAAGACAGATAAGTaGAAAAATACGAACACGCAT +
Preference number: 4 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPDKTDK*KNTNTH
Trigger: ATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGTC...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp ACAGGTGGTCAGAACCACCACAGTTTTGTGAATGAATCAGAGAAGGCAACATTTGTTGAGTTACATCAGTaGTCAACAATGGAGCAACAA +
Preference number: 4 (lower is better)
Translates to: TGGQNHHSFVNESEKATFVELHQ*STMEQQ
Trigger: TTGTTGCTCCATTGTTGACCACTGATGTAACTCAAC...AAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp CTGATCAGTCCTAATATCAGAAAAGAGACAAGTAGACATTATGTGCTTCCTGAGTACATTCTGATCAGGTaGACTGGTAACTTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LISPNIRKETSRHYVLPEYILIR*TGNLSA
Trigger: AGCTGACAAGTTACCAGTTCACCTGATCAGAATGTA...CTCAGGAAGCACATAATGTCTACTTGTCTCTTTTCTGATATTAGGACTGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAAACAGTGTCAACCAAATaGTGCCTCCAACTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: TRQISGKIRTRISVSKPETVSTK*CLQLLL
Trigger: TAAAAGGAGTTGGAGGCATCATTTGGTTGACACTGT...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATTACTTGAGATCATCCTaGCACCGATACTCATATTTG +
Preference number: 4 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNYLRSS*HRYSYL
Trigger: CAAATATGAGTATCGGTGGCAGGATGATCTCAAGTA...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CTGATCAGTCCTAATATCAGAAAAGAGACAAGTAGACATTATGTGCTTCCTGAGTACAAGTCAGCCGTCTaGGTGTTAAATCTACACGTA +
Preference number: 4 (lower is better)
Translates to: LISPNIRKETSRHYVLPEYKSAV*VLNLHV
Trigger: TACGTGTAGATTTAACACCCAGACGGCTGACTTGTA...CTCAGGAAGCACATAATGTCTACTTGTCTCTTTTCTGATATTAGGACTGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAACTCCCTCCTGTTATATaGAAAGGGATGAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: TRQISGKIRTRISVSKPELPPVI*KGMNAL
Trigger: CAAAGCATTCATCCCTTTCCATATAACAGGAGGGAG...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp TCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAATGAGTCTATAAATAAACTATaGGTCCAAATGGGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SKFLPLNLALRLWVFGNESINKL*VQMGGH
Trigger: ATGACCTCCCATTTGGACCCATAGTTTATTTATAGA...CTCATTTCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTTTAATGATTGTGCCTTaGTACACATTTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPLMIVP*YTFPQR
Trigger: TCTTTGAGGAAATGTGTACCAAGGCACAATCATTAA...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
3UTR CAA 72 bp GAATGGAATTCAAGATGTTGTGGAGGGTTCAGTGGGTaGGTTATACCAAAGAATGCTATAGAATTTCCATGC +
Preference number: 4 (lower is better)
Translates to: EWNSRCCGGFSG*VIPKNAIEFPC
Trigger: GCATGGAAATTCTATAGCATTCTTTGGTATAACCAACCCACTGAACCCTCCACAACATCTTGAATTCCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATATTAGTGACACATCCTaGTCGTCATTTCTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNISDTS*SSFLSK
Trigger: CTTTGAAAGAAATGACGAGCAGGATGTGTCACTAAT...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp GTATTTCTCAATTACAGCCGTGTAAGACATTTTCTTCCTAATCATCTCTCCCTTATACAAATCCTCACTTaGCCATGCTCTCACGTATTG +
Preference number: 4 (lower is better)
Translates to: VFLNYSRVRHFLPNHLSLIQILT*PCSHVL
Trigger: CAATACGTGAGAGCATGGGCAAGTGAGGATTTGTAT...AAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAATCAGCTCGAGTTGAATaGAATTCAAGATGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: TRQISGKIRTRISVSKPESARVE*NSRCCG
Trigger: TCCACAACATCTTGAATTCCATTCAACTCGAGCTGA...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR TCA 90 bp CTGATCAGTCCTAATATCAGAAAAGAGACAAGTAGACATTATGTGCTTCCTGAGATATTTCCTCGTTGTTaGTCTGAACCTCAATCCAAT +
Preference number: 4 (lower is better)
Translates to: LISPNIRKETSRHYVLPEIFPRC*SEPQSN
Trigger: ATTGGATTGAGGTTCAGATCAACAACGAGGAAATAT...CTCAGGAAGCACATAATGTCTACTTGTCTCTTTTCTGATATTAGGACTGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR GCA 90 bp CTGATCAGTCCTAATATCAGAAAAGAGACAAGTAGACATTATGTGCTTCCTGAGGGTTATACCAAAGAATaGTATAGAATTTCCATGCCC +
Preference number: 4 (lower is better)
Translates to: LISPNIRKETSRHYVLPEGYTKE*YRISMP
Trigger: GGGCATGGAAATTCTATAGCATTCTTTGGTATAACC...CTCAGGAAGCACATAATGTCTACTTGTCTCTTTTCTGATATTAGGACTGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CCA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAAAAAAAGTCTAGATTGTaGGACATTCCACAAACTTGC +
Preference number: 4 (lower is better)
Translates to: TRQISGKIRTRISVSKPEKKSRL*DIPQTC
Trigger: GCAAGTTTGTGGAATGTCCCACAATCTAGACTTTTT...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS GCA 90 bp GTCCCGGCGAGCCAACCGGCGGACGGGCGAGCGCCTGGCTCCAGCTaGAGCCGCCGTCGCTCCGGAGCAGCCCCCTCATGCACCCAGCGC +
Preference number: 5 (lower is better)
Translates to: VPASQPADGRAPGSS*SRRRSGAAPSCTQR
Trigger: GCGCTGGGTGCATGAGGGGGCTGCTCCGGAGCGACGGCGGCTGCAGCTGGAGCCAGGCGCTCGCCCGTCCGCCGGTTGGCTCGCCGGGAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS CCA 90 bp GGTGCGCGAGGTCCCGGCGAGCCAACCGGCGGACGGGCGAGCGCCTaGCTCCAGCTGCAGCCGCCGTCGCTCCGGAGCAGCCCCCTCATG +
Preference number: 5 (lower is better)
Translates to: GARGPGEPTGGRASA*LQLQPPSLRSSPLM
Trigger: CATGAGGGGGCTGCTCCGGAGCGACGGCGGCTGCAGCTGGAGCCAGGCGCTCGCCCGTCCGCCGGTTGGCTCGCCGGGACCTCGCGCACC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS GCA 90 bp GGTGGGGCGTCGCTTGCCAATCCACGCAAGGGACTCTGCCGCCGGTaGGCGAGGTCCCGGCGAGCCAACCGGCGGACGGGCGAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: GGASLANPRKGLCRR*ARSRRANRRTGERL
Trigger: CAGGCGCTCGCCCGTCCGCCGGTTGGCTCGCCGGGACCTCGCGCACCGGCGGCAGAGTCCCTTGCGTGGATTGGCAAGCGACGCCCCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS GCA 90 bp CTCGGGGCAGGTGGGGCGTCGCTTGCCAATCCACGCAAGGGACTCTaGCGCCGGTGCGCGAGGTCCCGGCGAGCCAACCGGCGGACGGGC +
Preference number: 5 (lower is better)
Translates to: LGAGGASLANPRKGL*RRCARSRRANRRTG
Trigger: GCCCGTCCGCCGGTTGGCTCGCCGGGACCTCGCGCACCGGCGGCAGAGTCCCTTGCGTGGATTGGCAAGCGACGCCCCACCTGCCCCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp TCAAGGGGCTGGTCCTTCTTTCACGTTGTGGTCTGCCTCGTCCACAGGTCTGGGCAGGTGGGGCGTCGCTaGCCAATCCACGCAAGGGAC +
Preference number: 5 (lower is better)
Translates to: SRGWSFFHVVVCLVHRSGQVGRR*PIHARD
Trigger: GTCCCTTGCGTGGATTGGCAAGCGACGCCCCACCTG...CCCAGACCTGTGGACGAGGCAGACCACAACGTGAAAGAAGGACCAGCCCCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CCACCTCTGCTGTTCCTGGGAGTAGGTGTGTCATTTCAGCCAGGGTGGTCCACCAGCTCCACTGTTACCTaGGCAACCGTGGCCCAATCA +
Preference number: 5 (lower is better)
Translates to: PPLLFLGVGVSFQPGWSTSSTVT*ATVAQS
Trigger: TGATTGGGCCACGGTTGCCAAGGTAACAGTGGAGCT...GGTGGACCACCCTGGCTGAAATGACACACCTACTCCCAGGAACAGCAGAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CCACCTCTGCTGTTCCTGGGAGTAGGTGTGTCATTTCAGCCAGGGTGGTCCACCGTGATGTGGAGAGCTTaGGGAAGGTTTCACGTTGAG +
Preference number: 5 (lower is better)
Translates to: PPLLFLGVGVSFQPGWSTVMWRA*GRFHVE
Trigger: CTCAACGTGAAACCTTCCCAAAGCTCTCCACATCAC...GGTGGACCACCCTGGCTGAAATGACACACCTACTCCCAGGAACAGCAGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CTGGCTACTCAGGAGGCTAAGGTTGAAGCTCACTTGAGGCAAGGGGTTCAAGGCCACCGATACTCATATTaGGGGCCCCCTGACATCACA +
Preference number: 5 (lower is better)
Translates to: LATQEAKVEAHLRQGVQGHRYSY*GPPDIT
Trigger: TGTGATGTCAGGGGGCCCCAAATATGAGTATCGGTG...GCCTTGAACCCCTTGCCTCAAGTGAGCTTCAACCTTAGCCTCCTGAGTAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CTGGCTACTCAGGAGGCTAAGGTTGAAGCTCACTTGAGGCAAGGGGTTCAAGGCCATGATTCTAGTCTTTaGTGGCAGCCACAGAGGGCT +
Preference number: 5 (lower is better)
Translates to: LATQEAKVEAHLRQGVQGHDSSL*WQPQRA
Trigger: AGCCCTCTGTGGCTGCCACAAAAGACTAGAATCATG...GCCTTGAACCCCTTGCCTCAAGTGAGCTTCAACCTTAGCCTCCTGAGTAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp TCATTTCAGCCAGGGTGGTCCACCTCCTGCCCGCTCAGGGCACCAGGAGGAAACGGACATTCCACAAACTaGCCTGAACTCTTTAATAAT +
Preference number: 5 (lower is better)
Translates to: SFQPGWSTSCPLRAPGGNGHSTN*PELFNN
Trigger: ATTATTAAAGAGTTCAGGCAAGTTTGTGGAATGTCC...GTTTCCTCCTGGTGCCCTGAGCGGGCAGGAGGTGGACCACCCTGGCTGAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CCACCTCTGCTGTTCCTGGGAGTAGGTGTGTCATTTCAGCCAGGGTGGTCCACCAATGCTTATAATATTTaGGGGATCCTGGGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: PPLLFLGVGVSFQPGWSTNAYNI*GILGLL
Trigger: AAGGAGGCCCAGGATCCCCAAAATATTATAAGCATT...GGTGGACCACCCTGGCTGAAATGACACACCTACTCCCAGGAACAGCAGAGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CATGTGTGGAAGTGCAGAGGCTTCCTCGTGGACAATTCCCCAGCCAGAACGGTCCATACAAATCCTCACTaGCCCATGCTCTCACGTATT +
Preference number: 5 (lower is better)
Translates to: HVWKCRGFLVDNSPARTVHTNPH*PMLSRI
Trigger: AATACGTGAGAGCATGGGCAAGTGAGGATTTGTATG...GACCGTTCTGGCTGGGGAATTGTCCACGAGGAAGCCTCTGCACTTCCACACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp TCATTTCAGCCAGGGTGGTCCACCTCCTGCCCGCTCAGGGCACCAGGAGGAAACTTTAATGATTGTGCCTaGGTACACATTTCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SFQPGWSTSCPLRAPGGNFNDCA*VHISSK
Trigger: CTTTGAGGAAATGTGTACCAAGGCACAATCATTAAA...GTTTCCTCCTGGTGCCCTGAGCGGGCAGGAGGTGGACCACCCTGGCTGAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp GCTCCACAGCCCTGCACAGTGTTAAACCACAGATCAGAGCAGGAGCTTTTAGAGTCTGGTAACTGTGTATaGCAGAGGCTGGGACTTAGG +
Preference number: 5 (lower is better)
Translates to: APQPCTVLNHRSEQELLESGNCV*QRLGLR
Trigger: CCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGA...CTCTAAAAGCTCCTGCTCTGATCTGTGGTTTAACACTGTGCAGGGCTGTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS TCA 90 bp CGCTCAGGGCACCAGGAGGAAACAGCTTTCCTTTCTTCCAAAGGGTaGGGTGGAGCATTAGTGACACATCCTGCTCGTCATTTCTTTCAA +
Preference number: 5 (lower is better)
Translates to: RSGHQEETAFLSSKG*GGALVTHPARHFFQ
Trigger: TTGAAAGAAATGACGAGCAGGATGTGTCACTAATGCTCCACCTCACCCTTTGGAAGAAAGGAAAGCTGTTTCCTCCTGGTGCCCTGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp GCATTCCCATCTGGTAACTGTGTATTGCAGAGGCTGGGACTTAGGGGCTCTTGTTTCGCTTCCTTTCTTTaGCAGGAAGCGAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: AFPSGNCVLQRLGLRGSCFASFL*QEAKRH
Trigger: GTGCCTTTTCGCTTCCTGCAAAAGAAAGGAAGCGAA...ACAAGAGCCCCTAAGTCCCAGCCTCTGCAATACACAGTTACCAGATGGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS CCA 90 bp AGGGCACCAGGAGGAAACAGCTTTCCTTTCTTCCAAAGGGTGAGGTaGAGCATTAGTGACACATCCTGCTCGTCATTTCTTTCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: RAPGGNSFPFFQRVR*SISDTSCSSFLSKA
Trigger: AGCCTTTGAAAGAAATGACGAGCAGGATGTGTCACTAATGCTCCACCTCACCCTTTGGAAGAAAGGAAAGCTGTTTCCTCCTGGTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp TCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAATGAGGGTCCTTCTTTCACGTaGTGGTCTGCCTCGTCCACA +
Preference number: 5 (lower is better)
Translates to: SKFLPLNLALRLWVFGNEGPSFT*WSASST
Trigger: TGTGGACGAGGCAGACCACAACGTGAAAGAAGGACC...CTCATTTCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp AGCACTCAGAAGGTTAAGAGCACACAAAGTGAGTGGGGAATGTCTCTCAGGAGTGGATCCTGGGCCTCCTaGAGAACATTAAGGGATGAA +
Preference number: 5 (lower is better)
Translates to: STQKVKSTQSEWGMSLRSGSWAS*RTLRDE
Trigger: TTCATCCCTTAATGTTCTCAAGGAGGCCCAGGATCC...ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAACCTTCTGAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp AGCACTCAGAAGGTTAAGAGCACACAAAGTGAGTGGGGAATGTCTCTCAGGAGTCCATGCTCTCACGTATaGCCTGCACATGGAAACTTC +
Preference number: 5 (lower is better)
Translates to: STQKVKSTQSEWGMSLRSPCSHV*PAHGNF
Trigger: GAAGTTTCCATGTGCAGGCAATACGTGAGAGCATGG...ACTCCTGAGAGACATTCCCCACTCACTTTGTGTGCTCTTAACCTTCTGAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp GCTCCACAGCCCTGCACAGTGTTAAACCACAGATCAGAGCAGGAGCTTTTAGAGTGGGAAGGTTTCACGTaGAGTTACATCAGTGGTCAA +
Preference number: 5 (lower is better)
Translates to: APQPCTVLNHRSEQELLEWEGFT*SYISGQ
Trigger: TTGACCACTGATGTAACTCAACGTGAAACCTTCCCA...CTCTAAAAGCTCCTGCTCTGATCTGTGGTTTAACACTGTGCAGGGCTGTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS CCA 90 bp GAGTTAAGTGAGAGTAGCATAAAGTGCAGGTCTTTTTGCTCACCTTaGGTGCTCCTTTCAAACCACGCAGTTCTCTACAAAGCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: ELSESSIKCRSFCSP*VLLSNHAVLYKAAR
Trigger: TCTGGCTGCTTTGTAGAGAACTGCGTGGTTTGAAAGGAGCACCCAAGGTGAGCAAAAAGACCTGCACTTTATGCTACTCTCACTTAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603061.1
CDS-3UTR CAA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTGGTTCAAATTTCCTCTaGGGTCGGAAGGTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPGSNFL*GRKVLS
Trigger: GGACAAGACCTTCCGACCCAAGAGGAAATTTGAACC...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CTAGTGCTATATCATCTGACTGCAATGCTTATAATATTTTGGGGATCCTGGGCCGAAGAAGAAGGAGGGTaGTCAGTCTCTGACCCAGAG +
Preference number: 5 (lower is better)
Translates to: LVLYHLTAMLIIFWGSWAEEEGG*SVSDPE
Trigger: CTCTGGGTCAGAGACTGACAACCCTCCTTCTTCTTC...GGCCCAGGATCCCCAAAATATTATAAGCATTGCAGTCAGATGATATAGCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp TCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAATGAGGTTGGCTTCTTATACTaGAGATCATCCTGCCACCGA +
Preference number: 5 (lower is better)
Translates to: SKFLPLNLALRLWVFGNEVGFLY*RSSCHR
Trigger: TCGGTGGCAGGATGATCTCAAGTATAAGAAGCCAAC...CTCATTTCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp ACAGGTGGTCAGAACCACCACAGTTTTGTGAATGAATCAGAGAAGGCAACATTTAAAGGCTCTAGCTCCTaGCGGTCTATGAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: TGGQNHHSFVNESEKATFKGSSS*RSMRFI
Trigger: GATGAACCTCATAGACCGCAAGGAGCTAGAGCCTTT...AAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTTGTACTTGTGATCCTTaGGAGGGTCACAACTCACTG +
Preference number: 5 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPCTCDP*EGHNSL
Trigger: CAGTGAGTTGTGACCCTCCAAAGGATCACAAGTACA...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CTGATCAGTCCTAATATCAGAAAAGAGACAAGTAGACATTATGTGCTTCCTGAGTCTGAAGGAAGTTCTTaGGGAAGGGAACACCCACGC +
Preference number: 5 (lower is better)
Translates to: LISPNIRKETSRHYVLPESEGSS*GREHPR
Trigger: GCGTGGGTGTTCCCTTCCCAAAGAACTTCCTTCAGA...CTCAGGAAGCACATAATGTCTACTTGTCTCTTTTCTGATATTAGGACTGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAAAAGGGATGAATGCTTaGCTAGTGCTATATCATCTG +
Preference number: 5 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGKGMNA*LVLYHL
Trigger: CAGATGATATAGCACTAGCAAAGCATTCATCCCTTT...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CTGATCAGTCCTAATATCAGAAAAGAGACAAGTAGACATTATGTGCTTCCTGAGCAAGGTTCAGGCTGCTaGGTTAGGTCAACAGAGAAT +
Preference number: 5 (lower is better)
Translates to: LISPNIRKETSRHYVLPEQGSGC*VRSTEN
Trigger: ATTCTCTGTTGACCTAACCAAGCAGCCTGAACCTTG...CTCAGGAAGCACATAATGTCTACTTGTCTCTTTTCTGATATTAGGACTGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp CCCCATGGAGTGTCCCTGATAAAACTATTTATTAGGGAAATGCTATGGACGCCTAAAGTATGTTTATTGTaGACCAGGGCACAGCAACAT +
Preference number: 5 (lower is better)
Translates to: PHGVSLIKLFIREMLWTPKVCLL*TRAQQH
Trigger: ATGTTGCTGTGCCCTGGTCAACAATAAACATACTTT...AGGCGTCCATAGCATTTCCCTAATAAATAGTTTTATCAGGGACACTCCATGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp AACCTCTCAAAGTTTCTTCCACTTAACCTGGCTCTGAGACTCTGGGTCTTTGGAATACTTCAGCTCGAGTaGAATGGAATTCAAGATGTT +
Preference number: 5 (lower is better)
Translates to: NLSKFLPLNLALRLWVFGILQLE*NGIQDV
Trigger: AACATCTTGAATTCCATTCAACTCGAGCTGAAGTAT...TCCAAAGACCCAGAGTCTCAGAGCCAGGTTAAGTGGAAGAAACTTTGAGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAAGAACACCCACGCATGTaGGAAATATTTCCTCGTTGT +
Preference number: 5 (lower is better)
Translates to: TRQISGKIRTRISVSKPEEHPRM*EIFPRC
Trigger: ACAACGAGGAAATATTTCCAACATGCGTGGGTGTTC...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp TGTAGAGACAGCCACGACTCCCTGTCTTTAATAAAGAACAAACACTGCAGTAATCTAATCATCTCTCCCTaGCACCATCACCATGAAATT +
Preference number: 5 (lower is better)
Translates to: CRDSHDSLSLIKNKHCSNLIISP*HHHHEI
Trigger: AATTTCATGGTGATGGTGCAAGGGAGAGATGATTAG...ATTACTGCAGTGTTTGTTCTTTATTAAAGACAGGGAGTCGTGGCTGTCTCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAATTATTGCATAAAAACTaGCTGCACATCCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: TRQISGKIRTRISVSKPELLHKN*LHIQRS
Trigger: GGACCTCTGGATGTGCAGCAAGTTTTTATGCAATAA...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp GTATTTCTCAATTACAGCCGTGTAAGACATTTTCTTCCTAATCATCTCTCCCTTATGGAATTCAAGATGTaGTGGAGGGTTCAGTGGGTT +
Preference number: 5 (lower is better)
Translates to: VFLNYSRVRHFLPNHLSLMEFKM*WRVQWV
Trigger: AACCCACTGAACCCTCCACAACATCTTGAATTCCAT...AAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp ACAGGTGGTCAGAACCACCACAGTTTTGTGAATGAATCAGAGAAGGCAACATTTCCAAACACACTTTGTTaGTCTAATTCTAGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: TGGQNHHSFVNESEKATFPNTLC*SNSRRE
Trigger: TTCTCTCCTAGAATTAGACAAACAAAGTGTGTTTGG...AAATGTTGCCTTCTCTGATTCATTCACAAAACTGTGGTGGTTCTGACCACCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp GTATTTCTCAATTACAGCCGTGTAAGACATTTTCTTCCTAATCATCTCTCCCTTGGGCAGAAATTAATTTaGTGCCGTAACATAACGTGG +
Preference number: 5 (lower is better)
Translates to: VFLNYSRVRHFLPNHLSLGQKLI*CRNITW
Trigger: CCACGTTATGTTACGGCACAAAATTAATTTCTGCCC...AAGGGAGAGATGATTAGGAAGAAAATGTCTTACACGGCTGTAATTGAGAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAACAGCCCTTTCTTAGCTaGGACAAAGATTTCATGATT +
Preference number: 5 (lower is better)
Translates to: TRQISGKIRTRISVSKPEQPFLS*DKDFMI
Trigger: AATCATGAAATCTTTGTCCAAGCTAAGAAAGGGCTG...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS-3UTR CAA 90 bp ACAAGACAGATAAGTGGAAAAATACGAACACGCATCTCAGTCTCAAAACCTGAAATGGGCGTGAAAATATaGCAGATTTATAGGACAATG +
Preference number: 5 (lower is better)
Translates to: TRQISGKIRTRISVSKPEMGVKI*QIYRTM
Trigger: CATTGTCCTATAAATCTGCAATATTTTCACGCCCAT...TTCAGGTTTTGAGACTGAGATGCGTGTTCGTATTTTTCCACTTATCTGTCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS GCA 72 bp TCGCTTGCCAATCCACGCAAGGGACTCTGCCGCCGGTaGGCGAGGTCCCGGCGAGCCAACCGGCGGACGGGC +
Preference number: 6 (lower is better)
Translates to: SLANPRKGLCRR*ARSRRANRRTG
Trigger: GCCCGTCCGCCGGTTGGCTCGCCGGGACCTCGCGCACCGGCGGCAGAGTCCCTTGCGTGGATTGGCAAGCGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS GCA 72 bp GGTGGGGCGTCGCTTGCCAATCCACGCAAGGGACTCTaGCGCCGGTGCGCGAGGTCCCGGCGAGCCAACCGG +
Preference number: 6 (lower is better)
Translates to: GGASLANPRKGL*RRCARSRRANR
Trigger: CCGGTTGGCTCGCCGGGACCTCGCGCACCGGCGGCAGAGTCCCTTGCGTGGATTGGCAAGCGACGCCCCACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS GCA 72 bp CACAGCCGCCTTCAGGTCCACACCCGAGTTGAGGGATaGCTGAGCCCGTTTGTGCAGCTCAAACCTCTGTGT +
Preference number: 6 (lower is better)
Translates to: HSRLQVHTRVEG*LSPFVQLKPLC
Trigger: ACACAGAGGTTTGAGCTGCACAAACGGGCTCAGGCATCCCTCAACTCGGGTGTGGACCTGAAGGCGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS GCA 72 bp TTCAGGGAGAGATCACAGCCCAACAGTGTTTTCCACTaGCAGCACTCAGGCCCCAGTCTTACAGCCTGTAGC +
Preference number: 6 (lower is better)
Translates to: FRERSQPNSVFH*QHSGPSLTACS
Trigger: GCTACAGGCTGTAAGACTGGGGCCTGAGTGCTGGCAGTGGAAAACACTGTTGGGCTGTGATCTCTCCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS TCA 72 bp CACCAGGAGGAAACAGCTTTCCTTTCTTCCAAAGGGTaGGGTGGAGCATTAGTGACACATCCTGCTCGTCAT +
Preference number: 6 (lower is better)
Translates to: HQEETAFLSSKG*GGALVTHPARH
Trigger: ATGACGAGCAGGATGTGTCACTAATGCTCCACCTCACCCTTTGGAAGAAAGGAAAGCTGTTTCCTCCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS CCA 72 bp AAGAAGGTTCATGTACTGGGGAGCTGGCAGCGCTGTTaGCTTCTTATACTTGAGATCATCCTGCCACCGATA +
Preference number: 6 (lower is better)
Translates to: KKVHVLGSWQRC*LLILEIILPPI
Trigger: TATCGGTGGCAGGATGATCTCAAGTATAAGAAGCCAACAGCGCTGCCAGCTCCCCAGTACATGAACCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS GCA 72 bp TTCCAAAGGGTGAGGTGGAGCATTAGTGACACATCCTaGTCGTCATTTCTTTCAAAGGCTCTAGCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: FQRVRWSISDTS*SSFLSKALAPC
Trigger: GCAAGGAGCTAGAGCCTTTGAAAGAAATGACGAGCAGGATGTGTCACTAATGCTCCACCTCACCCTTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS CCA 72 bp GGAGGAAACAGCTTTCCTTTCTTCCAAAGGGTGAGGTaGAGCATTAGTGACACATCCTGCTCGTCATTTCTT +
Preference number: 6 (lower is better)
Translates to: GGNSFPFFQRVR*SISDTSCSSFL
Trigger: AAGAAATGACGAGCAGGATGTGTCACTAATGCTCCACCTCACCCTTTGGAAGAAAGGAAAGCTGTTTCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS CAA 90 bp ATCCTCAGAATAAAGTCCCAAAACCTTACTGTGGCCTCACATAATTaGTCTACCTCCAACTTCCTCCATTTCCACACTCCAGCTGCACTG +
Preference number: 6 (lower is better)
Translates to: ILRIKSQNLTVASHN*STSNFLHFHTPAAL
Trigger: CAGTGCAGCTGGAGTGTGGAAATGGAGGAAGTTGGAGGTAGACAAATTATGTGAGGCCACAGTAAGGTTTTGGGACTTTATTCTGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603061.1
CDS GCA 72 bp GAGTTAAGTGAGAGTAGCATAAAGTGCAGGTCTTTTTaGTCACCTTGGGTGCTCCTTTCAAACCACGCAGTT +
Preference number: 6 (lower is better)
Translates to: ELSESSIKCRSF*SPWVLLSNHAV
Trigger: AACTGCGTGGTTTGAAAGGAGCACCCAAGGTGAGCAAAAAGACCTGCACTTTATGCTACTCTCACTTAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603061.1
CDS CCA 72 bp GCACAGGATCTTCTTGCAGATCTGAAGGAAGTTCTTTaGGAAGGGAACACCCACGCATGTTGGAAATATTTC +
Preference number: 6 (lower is better)
Translates to: AQDLLADLKEVL*EGNTHACWKYF
Trigger: GAAATATTTCCAACATGCGTGGGTGTTCCCTTCCCAAAGAACTTCCTTCAGATCTGCAAGAAGATCCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262244.6
CDS CAA 72 bp ATAAAGTCCCAAAACCTTACTGTGGCCTCACATAATTaGTCTACCTCCAACTTCCTCCATTTCCACACTCCA +
Preference number: 6 (lower is better)
Translates to: IKSQNLTVASHN*STSNFLHFHTP
Trigger: TGGAGTGTGGAAATGGAGGAAGTTGGAGGTAGACAAATTATGTGAGGCCACAGTAAGGTTTTGGGACTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603061.1