RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MOB3A (Homo sapiens)

Ensembl gene IDs: ENSG00000172081

Ensembl transcript IDs: ENST00000357066.8, ENST00000586676.5, ENST00000589902.5, ENST00000591236.1, ENST00000591326.5, ENST00000591638.1, ENST00000592143.2, ENST00000592280.1

Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGGGATaGTGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCG +
Preference number: 1 (lower is better)
Translates to: RPLVSLRCSGRREAG*WFQSVLLQVSEAPA
Trigger: CGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
3UTR TCA 90 bp GGGAGGGAGGAAAGAGGCTGCCTGGGTCCAGGTTGTGCCTCTGTGTaGAGAGACACCAGCGGCTGCCAGTGGGGAGTGCGGAGTAAAGGC +
Preference number: 1 (lower is better)
Translates to: GREERGCLGPGCASV*RDTSGCQWGVRSKG
Trigger: GCCTTTACTCCGCACTCCCCACTGGCAGCCGCTGGTGTCTCTTCACACAGAGGCACAACCTGGACCCAGGCAGCCTCTTTCCTCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR GCA 90 bp GTTGTGCCTCTGTGTGAAGAGACACCAGCGGCTGCCAGTGGGGAGTaGGGAGTAAAGGCCTGCGGGAGGAGATGTCCGCTCTCAGGGGCT +
Preference number: 1 (lower is better)
Translates to: VVPLCEETPAAASGE*GVKACGRRCPLSGA
Trigger: AGCCCCTGAGAGCGGACATCTCCTCCCGCAGGCCTTTACTCCGCACTCCCCACTGGCAGCCGCTGGTGTCTCTTCACACAGAGGCACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR CCA 90 bp ACCTGGGAAGCTGCGTGGCCGGGCTGCTGGAGACATCCCGAGCCCTaGGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTA +
Preference number: 1 (lower is better)
Translates to: TWEAAWPGCWRHPEP*GRQRCGCLGFIFQV
Trigger: TACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCCCAGGGCTCGGGATGTCTCCAGCAGCCCGGCCACGCAGCTTCCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR TCA 90 bp TCTGGCAGAAGCCAGGAGAGACGGGGACAGCGTGCTTCTCTTCGGTaGCCATCCCAGGCGCCCAGAGGTGACCAGACTTCTGTGTGGTCT +
Preference number: 1 (lower is better)
Translates to: SGRSQERRGQRASLR*PSQAPRGDQTSVWS
Trigger: AGACCACACAGAAGTCTGGTCACCTCTGGGCGCCTGGGATGGTCACCGAAGAGAAGCACGCTGTCCCCGTCTCTCCTGGCTTCTGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR TCA 90 bp CAGAGTTCACGTTTTAGTCCCAGACGGGAGACTGAGGCTCGAGACTaGGGAAGGCATCTGCCGTCCGGGGTTGGAGCTCCTGAGGACCAA +
Preference number: 1 (lower is better)
Translates to: QSSRFSPRRETEARD*GRHLPSGVGAPEDQ
Trigger: TTGGTCCTCAGGAGCTCCAACCCCGGACGGCAGATGCCTTCCTCAGTCTCGAGCCTCAGTCTCCCGTCTGGGACTAAAACGTGAACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
3UTR CCA 90 bp GAAGCCGGGGTGCAGGACGTGGGGTCCCAGGAGTCCAGGAAGCCCTaGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGCAGAG +
Preference number: 1 (lower is better)
Translates to: EAGVQDVGSQESRKP*IQSAECFGRTEEAE
Trigger: CTCTGCTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACTCCTGGGACCCCACGTCCTGCACCCCGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR CCA 90 bp GCCGGGCTGCTGGAGACATCCCGAGCCCTGGGGGAGACAGAGGTGTaGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACATTTCA +
Preference number: 1 (lower is better)
Translates to: AGLLETSRALGETEV*VFGLHLPGTRRYIS
Trigger: TGAAATGTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCCCAGGGCTCGGGATGTCTCCAGCAGCCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR CCA 90 bp ATTCCAGACCAGGGGAGAGGCGTCCAGGGAGAGAAGAGTCCTGCTTaGGTTGATCATAAGCAAAGTGGACATCGTTCCGAAGAGGCAGAG +
Preference number: 1 (lower is better)
Translates to: IPDQGRGVQGEKSPA*VDHKQSGHRSEEAE
Trigger: CTCTGCCTCTTCGGAACGATGTCCACTTTGCTTATGATCAACCCAAGCAGGACTCTTCTCTCCCTGGACGCCTCTCCCCTGGTCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR TCA 90 bp GACGGGGACAGCGTGCTTCTCTTCGGTGACCATCCCAGGCGCCCAGAGGTGACCAGGTGGAGGATGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: DGDSVLLFGDHPRRPEVTRWRMQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCATCCTCCACCT...GGTCACCTCTGGGCGCCTGGGATGGTCACCGAAGAGAAGCACGCTGTCCCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR CCA 90 bp GACGGGGACAGCGTGCTTCTCTTCGGTGACCATCCCAGGCGCCCAGAGGTGACCGGTACACAGAACTCATaGATTTTGGTCTCGCAGCCC +
Preference number: 2 (lower is better)
Translates to: DGDSVLLFGDHPRRPEVTGTQNS*ILVSQP
Trigger: GGGCTGCGAGACCAAAATCCATGAGTTCTGTGTACC...GGTCACCTCTGGGCGCCTGGGATGGTCACCGAAGAGAAGCACGCTGTCCCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR CCA 90 bp ACGTCTGCGTCTGTAGTTTTATTCCGTATCTGGCTGGGGGAGGGTGGTCTCCGAGGCTCCCCAGCGAGGTaGAGGCAGAAGTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: TSASVVLFRIWLGEGGLRGSPAR*RQKFQE
Trigger: CTCCTGGAACTTCTGCCTCCACCTCGCTGGGGAGCC...TCGGAGACCACCCTCCCCCAGCCAGATACGGAATAAAACTACAGACGCAGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR GCA 90 bp ACGTCTGCGTCTGTAGTTTTATTCCGTATCTGGCTGGGGGAGGGTGGTCTCCGAAGCCCCTCAGCCTCTTaGCTCCCCAACGGGAGACAT +
Preference number: 2 (lower is better)
Translates to: TSASVVLFRIWLGEGGLRSPSAS*LPNGRH
Trigger: ATGTCTCCCGTTGGGGAGGCAAGAGGCTGAGGGGCT...TCGGAGACCACCCTCCCCCAGCCAGATACGGAATAAAACTACAGACGCAGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR GCA 90 bp GGGCCACACAGAAAAAGGGGTTCAACTGGAAGTTTGCAGCATCTGGGAAAGGCCACTGAGGAAGGCATCTaGCGTCCGGGGTTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: GPHRKRGSTGSLQHLGKATEEGI*RPGLEL
Trigger: GAGCTCCAACCCCGGACGGCAGATGCCTTCCTCAGT...GGCCTTTCCCAGATGCTGCAAACTTCCAGTTGAACCCCTTTTTCTGTGTGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR GCA 90 bp GGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACTGCGGAGTAAAGGCCTaGGGGAGGAGATGTCCGCTC +
Preference number: 2 (lower is better)
Translates to: GETEVWVFGLHLPGTRRYCGVKA*GRRCPL
Trigger: GAGCGGACATCTCCTCCCGCAGGCCTTTACTCCGCA...GTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR CAA 90 bp CAGACCAGGGGAGAGGCGTCCAGGGAGAGAAGAGTCCTGCTTGGGTaGATCATAAGCAAAGTGGACATCGTTCCGAAGAGGCAGAGAGCT +
Preference number: 2 (lower is better)
Translates to: QTRGEASRERRVLLG*IISKVDIVPKRQRA
Trigger: AGCTCTCTGCCTCTTCGGAACGATGTCCACTTTGCTTATGATCAACCCAAGCAGGACTCTTCTCTCCCTGGACGCCTCTCCCCTGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR TCA 90 bp GGCAGGAAGGACCACTGTGGTGAAAGGCCACTGACAATTCTGGTGAGGAGTAGGAAAATTAGCCGGGTGTaGCGGTGGGTGCCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: GRKDHCGERPLTILVRSRKISRV*RWVPVV
Trigger: GACTACAGGCACCCACCGTCACACCCGGCTAATTTT...CCTACTCCTCACCAGAATTGTCAGTGGCCTTTCACCACAGTGGTCCTTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR CCA 90 bp AGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACATTTCCGGGGTGCAGGACGTaGGGTCCCAGGAGTCCAGGA +
Preference number: 2 (lower is better)
Translates to: RQRCGCLGFIFQVQGDTFPGCRT*GPRSPG
Trigger: TCCTGGACTCCTGGGACCCCACGTCCTGCACCCCGG...AAATGTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR TCA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGGGTTGTGCCTCTGTGTaGAGAGACACCAGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKGCASV*RDTSGC
Trigger: GCAGCCGCTGGTGTCTCTTCACACAGAGGCACAACC...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR GCA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGCTGGTCTCCCTGAGATaGTCAGGCCGGAGAGAAGCG +
Preference number: 2 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKLVSLR*SGRREA
Trigger: CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAG...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR GCA 90 bp GGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACCTTTTCTCAGGGCCCTaGTCTCACCTTCCAAAGGTC +
Preference number: 2 (lower is better)
Translates to: GETEVWVFGLHLPGTRRYLFSGP*SHLPKV
Trigger: GACCTTTGGAAGGTGAGAGCAGGGCCCTGAGAAAAG...GTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR CCA 90 bp GGCAGGAAGGACCACTGTGGTGAAAGGCCACTGACAATTCTGGTGAGGAGTAGGGAGTCCAGGAAGCCCTaGATACAGTCAGCTGAATGT +
Preference number: 2 (lower is better)
Translates to: GRKDHCGERPLTILVRSRESRKP*IQSAEC
Trigger: ACATTCAGCTGACTGTATCCAGGGCTTCCTGGACTC...CCTACTCCTCACCAGAATTGTCAGTGGCCTTTCACCACAGTGGTCCTTCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR CCA 90 bp ACGTCTGCGTCTGTAGTTTTATTCCGTATCTGGCTGGGGGAGGGTGGTCTCCGAACTACAATAATTTCCTaGGCGTGGTGGCGCACACCT +
Preference number: 2 (lower is better)
Translates to: TSASVVLFRIWLGEGGLRTTIIS*AWWRTP
Trigger: AGGTGTGCGCCACCACGCCCAGGAAATTATTGTAGT...TCGGAGACCACCCTCCCCCAGCCAGATACGGAATAAAACTACAGACGCAGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR CCA 90 bp AGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACATTTGCTGAGGCAGGAGAATaGCGTGAATCTGGGAGGCGG +
Preference number: 2 (lower is better)
Translates to: RQRCGCLGFIFQVQGDTFAEAGE*RESGRR
Trigger: CCGCCTCCCAGATTCACGCCATTCTCCTGCCTCAGC...AAATGTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR CCA 90 bp GGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACGGACCTGGTGGTTTCTaGAAGGATCAAGGACAAGTC +
Preference number: 2 (lower is better)
Translates to: GETEVWVFGLHLPGTRRYGPGGF*KDQGQV
Trigger: GACTTGTCCTTGATCCTTCCAGAAACCACCAGGTCC...GTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR CCA 90 bp ACGTCTGCGTCTGTAGTTTTATTCCGTATCTGGCTGGGGGAGGGTGGTCTCCGACAGCCTCCTGGAAAGTaGAAGTGGTTTAAAAACACA +
Preference number: 2 (lower is better)
Translates to: TSASVVLFRIWLGEGGLRQPPGK*KWFKNT
Trigger: TGTGTTTTTAAACCACTTCCACTTTCCAGGAGGCTG...TCGGAGACCACCCTCCCCCAGCCAGATACGGAATAAAACTACAGACGCAGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR GCA 72 bp CTCCCCGAGCCCACCTGGGAAGCTGCGTGGCCGGGCTaGTGGAGACATCCCGAGCCCTGGGGGAGACAGAGG +
Preference number: 3 (lower is better)
Translates to: LPEPTWEAAWPG*WRHPEPWGRQR
Trigger: CCTCTGTCTCCCCCAGGGCTCGGGATGTCTCCAGCAGCCCGGCCACGCAGCTTCCCAGGTGGGCTCGGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR TCA 72 bp CTGAGGAAGGCATCTGCCGTCCGGGGTTGGAGCTCCTaGGGACCAACACCTGCTCAGCGGCTCGGCCCCTGG +
Preference number: 3 (lower is better)
Translates to: LRKASAVRGWSS*GPTPAQRLGPW
Trigger: CCAGGGGCCGAGCCGCTGAGCAGGTGTTGGTCCTCAGGAGCTCCAACCCCGGACGGCAGATGCCTTCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
3UTR CCA 72 bp GCTGCGTGGCCGGGCTGCTGGAGACATCCCGAGCCCTaGGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATC +
Preference number: 3 (lower is better)
Translates to: AAWPGCWRHPEP*GRQRCGCLGFI
Trigger: GATGAAGCCCAAACACCCACACCTCTGTCTCCCCCAGGGCTCGGGATGTCTCCAGCAGCCCGGCCACGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR TCA 72 bp CCAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTaGGATGCTCAGGCCGGAGAGAAGCGGGATGATGGT +
Preference number: 3 (lower is better)
Translates to: PTPAQRLGPWSP*DAQAGEKRDDG
Trigger: ACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
3UTR CCA 72 bp CTCCCCAACGGGAGACATGTAGGAGGCCGAGCAAGCTaGGTGCCCTTGAGAGACAGGCCCAGGCAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: LPNGRHVGGRAS*VPLRDRPRQGC
Trigger: ACAGCCCTGCCTGGGCCTGTCTCTCAAGGGCACCCAGCTTGCTCGGCCTCCTACATGTCTCCCGTTGGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR TCA 72 bp GAAAGAGGCTGCCTGGGTCCAGGTTGTGCCTCTGTGTaGAGAGACACCAGCGGCTGCCAGTGGGGAGTGCGG +
Preference number: 3 (lower is better)
Translates to: ERGCLGPGCASV*RDTSGCQWGVR
Trigger: CCGCACTCCCCACTGGCAGCCGCTGGTGTCTCTTCACACAGAGGCACAACCTGGACCCAGGCAGCCTCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR GCA 72 bp CTGTGTGAAGAGACACCAGCGGCTGCCAGTGGGGAGTaGGGAGTAAAGGCCTGCGGGAGGAGATGTCCGCTC +
Preference number: 3 (lower is better)
Translates to: LCEETPAAASGE*GVKACGRRCPL
Trigger: GAGCGGACATCTCCTCCCGCAGGCCTTTACTCCGCACTCCCCACTGGCAGCCGCTGGTGTCTCTTCACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR TCA 72 bp AGCCAGGAGAGACGGGGACAGCGTGCTTCTCTTCGGTaGCCATCCCAGGCGCCCAGAGGTGACCAGACTTCT +
Preference number: 3 (lower is better)
Translates to: SQERRGQRASLR*PSQAPRGDQTS
Trigger: AGAAGTCTGGTCACCTCTGGGCGCCTGGGATGGTCACCGAAGAGAAGCACGCTGTCCCCGTCTCTCCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR CAA 90 bp GACGGGGACAGCGTGCTTCTCTTCGGTGACCATCCCAGGCGCCCAGAGGTGACCGGTTCAACTGGAAGTTaGCAGCATCTGGGAAAGGCC +
Preference number: 3 (lower is better)
Translates to: DGDSVLLFGDHPRRPEVTGSTGS*QHLGKA
Trigger: GGCCTTTCCCAGATGCTGCAAACTTCCAGTTGAACC...GGTCACCTCTGGGCGCCTGGGATGGTCACCGAAGAGAAGCACGCTGTCCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR TCA 72 bp GTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGGGATaGTGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAG +
Preference number: 3 (lower is better)
Translates to: VSLRCSGRREAG*WFQSVLLQVSE
Trigger: CTCGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
3UTR GCA 72 bp ATTTTCTGGCAGAAGCCAGGAGAGACGGGGACAGCGTaGTTCTCTTCGGTGACCATCCCAGGCGCCCAGAGG +
Preference number: 3 (lower is better)
Translates to: IFWQKPGETGTA*FSSVTIPGAQR
Trigger: CCTCTGGGCGCCTGGGATGGTCACCGAAGAGAAGCACGCTGTCCCCGTCTCTCCTGGCTTCTGCCAGAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR CCA 72 bp GTGCAGGACGTGGGGTCCCAGGAGTCCAGGAAGCCCTaGATACAGTCAGCTGAATGTTTCGGAAGAACGGAA +
Preference number: 3 (lower is better)
Translates to: VQDVGSQESRKP*IQSAECFGRTE
Trigger: TTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACTCCTGGGACCCCACGTCCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR CCA 72 bp CAGGGGAGAGGCGTCCAGGGAGAGAAGAGTCCTGCTTaGGTTGATCATAAGCAAAGTGGACATCGTTCCGAA +
Preference number: 3 (lower is better)
Translates to: QGRGVQGEKSPA*VDHKQSGHRSE
Trigger: TTCGGAACGATGTCCACTTTGCTTATGATCAACCCAAGCAGGACTCTTCTCTCCCTGGACGCCTCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR CCA 72 bp AAGGAGATACATTTCATCAAGCAGTTCCTGATTTCATaGAGTTCTTTGAGGGCTCGGCTGGGAGGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: KEIHFIKQFLIS*SSLRARLGGPS
Trigger: AGAGGGACCTCCCAGCCGAGCCCTCAAAGAACTCCATGAAATCAGGAACTGCTTGATGAAATGTATCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR-3UTR CAA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGAGTGGGCTTTTCCGGTaGCTAGTAACACATAGAATT +
Preference number: 3 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKSGLFR*LVTHRI
Trigger: AATTCTATGTGTTACTAGCAACCGGAAAAGCCCACT...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR CCA 72 bp ACAGAAAAAGGGGTTCAACTGGAAGTTTGCAGCATCTaGGAAAGGCCAATTCTGGCAGAACTGGAAGATTCC +
Preference number: 3 (lower is better)
Translates to: TEKGVQLEVCSI*ERPILAELEDS
Trigger: GGAATCTTCCAGTTCTGCCAGAATTGGCCTTTCCCAGATGCTGCAAACTTCCAGTTGAACCCCTTTTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp CAGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGCTGGCTGGGGGTGCTaGCCAACCCGAGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: QSVLLQVSEAPAAVRAPGAGWGC*PTREAT
Trigger: CGTGGCCTCTCGGGTTGGTCAGCACCCCCAGCCAGC...TCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp TCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGCCTGGGCGCGGAGAGTaGCGTGGGCTTCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: SSKSPRPQRRFGHRETRGPGRGE*RGLPEL
Trigger: AAGTTCCGGAAGCCCACGGCACTCTCCGCGCCCAGG...CCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp TCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGGCTCTGAGGACCAACACCTaGTCAGCGGCTCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SKSPRPQRRFGHRETRGALRTNT*SAARPL
Trigger: CAGGGGCCGAGCCGCTGAGCAGGTGTTGGTCCTCAG...AGCCCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp AGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGGCTGCGTGGCCGGGCTaGTGGAGACATCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: RASSSKSPRPQRRFGHREAAWPG*WRHPEP
Trigger: GGGCTCGGGATGTCTCCAGCAGCCCGGCCACGCAGC...CTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp GTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGATGACGGGGCAGGACTaGTCCGTGCAGCCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: VLLQVSEAPAAVRAPGDPMTGQD*SVQPSL
Trigger: CAGCGACGGCTGCACGGAGCAGTCCTGCCCCGTCAT...CGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp TCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGGCCTCGGAGCCCATCTaGGCGATGCGGTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SSKSPRPQRRFGHRETRGASEPI*AMRSKW
Trigger: CCACTTTGACCGCATCGCGCAGATGGGCTCCGAGGC...CCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp CCAGCGGCTGCCAGTGGGGAGTGCGGAGTAAAGGCCTGCGGGAGGAGATGTCCGCTCCCCGAGCCCACCTaGGAAGCTGCGTGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PAAASGECGVKACGRRCPLPEPT*EAAWPG
Trigger: GCCCGGCCACGCAGCTTCCCAGGTGGGCTCGGGGAG...CGGACATCTCCTCCCGCAGGCCTTTACTCCGCACTCCCCACTGGCAGCCGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp TCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGGCTGCTCGAAGCGCTGGGTaGCTGGCTCAAACTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SKSPRPQRRFGHRETRGAARSAG*LAQTCA
Trigger: AGCGCAAGTTTGAGCCAGGCACCCAGCGCTTCGAGC...AGCCCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp TCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGTGCGGAGTAAAGGCCTaGGGGAGGAGATGTCCGCTC +
Preference number: 4 (lower is better)
Translates to: SSKSPRPQRRFGHRETRGCGVKA*GRRCPL
Trigger: GAGCGGACATCTCCTCCCGCAGGCCTTTACTCCGCA...CCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp CAGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACAGAGATGGTCCCTaGTCCCACCTCCCCGAGCCC +
Preference number: 4 (lower is better)
Translates to: QSVLLQVSEAPAAVRAPGDRDGP*SHLPEP
Trigger: GGGCTCGGGGAGGTGGGAGCAGGGACCATCTCTGTC...TCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp CAGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGACGGGGTTGGAGCTCCTaGGGACCAACACCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QSVLLQVSEAPAAVRAPGRGWSS*GPTPAQ
Trigger: CTGAGCAGGTGTTGGTCCTCAGGAGCTCCAACCCCG...TCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR TCA 90 bp GTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGTCCCAGACGGGAGACTaGGGCTCGAGACTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VLLQVSEAPAAVRAPGDPSQTGD*GSRLRK
Trigger: CTTCCTCAGTCTCGAGCCTCAGTCTCCCGTCTGGGA...CGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp GTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCCGAGATCCCACCACTaGACTCCAGCCTGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: VLLQVSEAPAAVRAPGDPPRSHH*TPAWLG
Trigger: GCCTAACCAGGCTGGAGTGCAGTGGTGGGATCTCGG...CGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp TGCGGGAGGAGATGTCCGCTCTCAGGGGCTCGGAAGCCCCTCAGCCTCTTGCCTCTCCCGGTACCCAACTaGCCGCCTCGGCCGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CGRRCPLSGARKPLSLLPLPVPN*PPRPPQ
Trigger: CTGAGGCGGCCGAGGCGGCCAGTTGGGTACCGGGAG...AGGCAAGAGGCTGAGGGGCTTCCGAGCCCCTGAGAGCGGACATCTCCTCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp TGCGGGAGGAGATGTCCGCTCTCAGGGGCTCGGAAGCCCCTCAGCCTCTTGCCTCCCGCGGACCGTGTCTaGGGCTCCCTCCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CGRRCPLSGARKPLSLLPPADRV*GSLRSA
Trigger: AGCAGAGCGGAGGGAGCCCCAGACACGGTCCGCGGG...AGGCAAGAGGCTGAGGGGCTTCCGAGCCCCTGAGAGCGGACATCTCCTCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp GTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGGCGCGGAGAGTGCCGTaGGCTTCCGGAACTTATGCT +
Preference number: 4 (lower is better)
Translates to: VLLQVSEAPAAVRAPGDPARRVP*ASGTYA
Trigger: AGCATAAGTTCCGGAAGCCCACGGCACTCTCCGCGC...CGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR TCA 90 bp TCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGTTTCATGGAGTTCTTTaGGGGCTCGGCTGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SSKSPRPQRRFGHRETRGFHGVL*GLGWEV
Trigger: GACCTCCCAGCCGAGCCCTCAAAGAACTCCATGAAA...CCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp CAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGCCTGGGCGCGGAGAGTaGCGTGGGCTTCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: QHLLSGSAPGLPEMLRPEPGRGE*RGLPEL
Trigger: AAGTTCCGGAAGCCCACGGCACTCTCCGCGCCCAGG...CTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp AGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACTGAGGAAGGCATCTaGCGTCCGGGGTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RASSSKSPRPQRRFGHRETEEGI*RPGLEL
Trigger: GAGCTCCAACCCCGGACGGCAGATGCCTTCCTCAGT...CTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp GTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGGAGACGGGGACAGCGTaGTTCTCTTCGGTGACCATC +
Preference number: 4 (lower is better)
Translates to: VLLQVSEAPAAVRAPGDPETGTA*FSSVTI
Trigger: GATGGTCACCGAAGAGAAGCACGCTGTCCCCGTCTC...CGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp CTGAGGACCAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGCCCACCTGGGAAGCTaGGTGGCCGGGCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRTNTCSAARPLVSLRCSAHLGS*VAGLLE
Trigger: CTCCAGCAGCCCGGCCACGCAGCTTCCCAGGTGGGC...TGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTGGTCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGTCTGTAGAGGGGTCCTaGGCCAGCTGGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CSAARPLVSLRCSGRREASVEGS*ASWLGV
Trigger: CACCCCCAGCCAGCTGGCCCAGGACCCCTCTACAGA...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp CAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGCCGCGGGGCTCTCAGTaGCACATCCGGGCGGTCATT +
Preference number: 4 (lower is better)
Translates to: QHLLSGSAPGLPEMLRPEPRGSQ*HIRAVI
Trigger: AATGACCGCCCGGATGTGCCACTGAGAGCCCCGCGG...CTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR TCA 90 bp CTGAGGACCAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCCCTGGTCTCCCTaGGATGCTCAGGCCGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRTNTCSAARPLVSLRCSGPWSP*DAQAGE
Trigger: CTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCC...TGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTGGTCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp CCAGCGGCTGCCAGTGGGGAGTGCGGAGTAAAGGCCTGCGGGAGGAGATGTCCGGCGTTCAGCGACGCCTaGGCCTTCTTGTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PAAASGECGVKACGRRCPAFSDA*AFLCSS
Trigger: CGAGCTGCACAAGAAGGCGCAGGCGTCGCTGAACGC...CGGACATCTCCTCCCGCAGGCCTTTACTCCGCACTCCCCACTGGCAGCCGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp GAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCATCGCCCGGGGGCAACTaGACGGCCAGCCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: EMLRPERSGMMVPERPPPSPGGN*TASRRS
Trigger: GGACCTGCGGCTGGCCGTGCAGTTGCCCCCGGGCGA...TGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp TGCGGGAGGAGATGTCCGCTCTCAGGGGCTCGGAAGCCCCTCAGCCTCTTGCCTCTGAGGACCAACACCTaGTCAGCGGCTCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: CGRRCPLSGARKPLSLLPLRTNT*SAARPL
Trigger: CAGGGGCCGAGCCGCTGAGCAGGTGTTGGTCCTCAG...AGGCAAGAGGCTGAGGGGCTTCCGAGCCCCTGAGAGCGGACATCTCCTCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp CAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAGACACCAGCGGCTaGCAGTGGGGAGTGCGGAGT +
Preference number: 4 (lower is better)
Translates to: QHLLSGSAPGLPEMLRPERDTSG*QWGVRS
Trigger: ACTCCGCACTCCCCACTGGCAGCCGCTGGTGTCTCT...CTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTGCTGGCTGGGGGTGCTaGCCAACCCGAGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: PEMLRPERSGMMVPERPPAGWGC*PTREAT
Trigger: CGTGGCCTCTCGGGTTGGTCAGCACCCCCAGCCAGC...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR TCA 90 bp CAGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAAGAGGTCCTCGTTGTTaGTCTGCGCCTCGATCCAGT +
Preference number: 4 (lower is better)
Translates to: QSVLLQVSEAPAAVRAPGRGPRC*SAPRSS
Trigger: ACTGGATCGAGGCGCAGATCAACAACGAGGACCTCT...TCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR TCA 90 bp CCAGCGGCTGCCAGTGGGGAGTGCGGAGTAAAGGCCTGCGGGAGGAGATGTCCGCGGAGAGAAGCGGGATaGTGGTTCCAGAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: PAAASGECGVKACGRRCPRREAG*WFQSVL
Trigger: GAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCG...CGGACATCTCCTCCCGCAGGCCTTTACTCCGCACTCCCCACTGGCAGCCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp CCAGCGGCTGCCAGTGGGGAGTGCGGAGTAAAGGCCTGCGGGAGGAGATGTCCGTCCCAGACGGGAGACTaGGGCTCGAGACTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PAAASGECGVKACGRRCPSQTGD*GSRLRK
Trigger: CTTCCTCAGTCTCGAGCCTCAGTCTCCCGTCTGGGA...CGGACATCTCCTCCCGCAGGCCTTTACTCCGCACTCCCCACTGGCAGCCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGGAAGCGCTGGGTGCCTaGCTCAAACTTGCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: CSAARPLVSLRCSGRREAEALGA*LKLALG
Trigger: CCCAAGCGCAAGTTTGAGCCAGGCACCCAGCGCTTC...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp AGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGGAGTGCCAACGTTGGTaGGGAAGAGGTCCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: RASSSKSPRPQRRFGHREECQRW*GRGPRC
Trigger: ACAACGAGGACCTCTTCCCCACCAACGTTGGCACTC...CTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp TCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGGCTTCTGCAGGAAGTTCTTaGGAAACGGAGTGCCAACGT +
Preference number: 4 (lower is better)
Translates to: SKSPRPQRRFGHRETRGASAGSS*ETECQR
Trigger: ACGTTGGCACTCCGTTTCCCAAGAACTTCCTGCAGA...AGCCCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp TCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGGCTGGTCATTTCTTTCAGTaGCTCCAGCTCCTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SKSPRPQRRFGHRETRGAGHFFQ*LQLLGV
Trigger: GACACCAAGGAGCTGGAGCCACTGAAAGAAATGACC...AGCCCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp GTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGAAGTGCCGGACCTGGTaGTTTCTGGAAGGATCAAGG +
Preference number: 4 (lower is better)
Translates to: VLLQVSEAPAAVRAPGDPKCRTW*FLEGSR
Trigger: CCTTGATCCTTCCAGAAACCACCAGGTCCGGCACTT...CGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp GACGGGGACAGCGTGCTTCTCTTCGGTGACCATCCCAGGCGCCCAGAGGTGACCACCTGGGAAGCTGCGTaGCCGGGCTGCTGGAGACAT +
Preference number: 4 (lower is better)
Translates to: DGDSVLLFGDHPRRPEVTTWEAA*PGCWRH
Trigger: ATGTCTCCAGCAGCCCGGCCACGCAGCTTCCCAGGT...GGTCACCTCTGGGCGCCTGGGATGGTCACCGAAGAGAAGCACGCTGTCCCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp TGCGGGAGGAGATGTCCGCTCTCAGGGGCTCGGAAGCCCCTCAGCCTCTTGCCTACTGAGGAAGGCATCTaGCGTCCGGGGTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: CGRRCPLSGARKPLSLLPTEEGI*RPGLEL
Trigger: GAGCTCCAACCCCGGACGGCAGATGCCTTCCTCAGT...AGGCAAGAGGCTGAGGGGCTTCCGAGCCCCTGAGAGCGGACATCTCCTCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGACGGAGTGCCAACGTTaGTGGGGAAGAGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: CSAARPLVSLRCSGRREATECQR*WGRGPR
Trigger: ACGAGGACCTCTTCCCCACCAACGTTGGCACTCCGT...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp CTGAGGACCAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAAGGAAGAGAGAGGGCTaGGTGCGGTGGCTCACCCCT +
Preference number: 4 (lower is better)
Translates to: LRTNTCSAARPLVSLRCSRKREG*VRWLTP
Trigger: AGGGGTGAGCCACCGCACCCAGCCCTCTCTCTTCCT...TGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTGGTCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR CAA 72 bp AGGCTCGAGACTGAGGAAGGCATCTGCCGTCCGGGGTaGGAGCTCCTGAGGACCAACACCTGCTCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: RLETEEGICRPG*ELLRTNTCSAA
Trigger: AGCCGCTGAGCAGGTGTTGGTCCTCAGGAGCTCCAACCCCGGACGGCAGATGCCTTCCTCAGTCTCGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp GGCAGGAAGGACCACTGTGGTGAAAGGCCACTGACAATTCTGGTGAGGAGTAGGTCGCCCGGGGGCAACTaGACGGCCAGCCGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GRKDHCGERPLTILVRSRSPGGN*TASRRS
Trigger: GGACCTGCGGCTGGCCGTGCAGTTGCCCCCGGGCGA...CCTACTCCTCACCAGAATTGTCAGTGGCCTTTCACCACAGTGGTCCTTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGGGCTTCCGGAACTTATaGTCATCCTGCCAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: CSAARPLVSLRCSGRREAGFRNL*SSCQRY
Trigger: GTACCGCTGGCAGGATGAGCATAAGTTCCGGAAGCC...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp GAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAGCTGCCAGTGGGGAGTaGGGAGTAAAGGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: EMLRPERSGMMVPERPPPAASGE*GVKACG
Trigger: CCCGCAGGCCTTTACTCCGCACTCCCCACTGGCAGC...TGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTGCAGGTCCATGTACCTaGGCGCGGAGAGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PEMLRPERSGMMVPERPPAGPCT*ARRVPW
Trigger: CCACGGCACTCTCCGCGCCCAGGTACATGGACCTGC...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGGAGTGCCAACGTTGGTaGGGAAGAGGTCCTCGTTGT +
Preference number: 4 (lower is better)
Translates to: CSAARPLVSLRCSGRREAECQRW*GRGPRC
Trigger: ACAACGAGGACCTCTTCCCCACCAACGTTGGCACTC...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp GCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAGGGGAGGCCGAGCAAGCTaGGTGCCCTTGAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: AGEKRDDGSRASSSKSPRGGRAS*VPLRDR
Trigger: CCTGTCTCTCAAGGGCACCCAGCTTGCTCGGCCTCC...CCTCGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp CCAGCGGCTGCCAGTGGGGAGTGCGGAGTAAAGGCCTGCGGGAGGAGATGTCCGAGGATGGAGGATCACTaGAGGCCAGGAGTTCAGCGA +
Preference number: 4 (lower is better)
Translates to: PAAASGECGVKACGRRCPRMEDH*RPGVQR
Trigger: TCGCTGAACTCCTGGCCTCCAGTGATCCTCCATCCT...CGGACATCTCCTCCCGCAGGCCTTTACTCCGCACTCCCCACTGGCAGCCGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp GTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCAGTTCCTGATTTCATaGAGTTCTTTGAGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: VLLQVSEAPAAVRAPGDPQFLIS*SSLRAR
Trigger: CCGAGCCCTCAAAGAACTCCATGAAATCAGGAACTG...CGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp GATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGACCCTTGGAAACTTCTaGTCGCCTCTGCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: DAQAGEKRDDGSRASSSKTLGNF*SPLPPA
Trigger: GGCGGGCGGCAGAGGCGATCAGAAGTTTCCAAGGGT...CTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp AGCCCTGGGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGGCCCCTGGTCTCCCTaGGATGCTCAGGCCGGAGAG +
Preference number: 4 (lower is better)
Translates to: SPGGDRGVGVWASSSRYKGPWSP*DAQAGE
Trigger: CTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCC...CTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCCCAGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp GAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCACGTGCTTCTCTTCGGTaGCCATCCCAGGCGCCCAGA +
Preference number: 4 (lower is better)
Translates to: EMLRPERSGMMVPERPPPRASLR*PSQAPR
Trigger: TCTGGGCGCCTGGGATGGTCACCGAAGAGAAGCACG...TGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTGCCTCGGAGCCCATCTaGGCGATGCGGTCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: PEMLRPERSGMMVPERPPASEPI*AMRSKW
Trigger: CCACTTTGACCGCATCGCGCAGATGGGCTCCGAGGC...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp CAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGGCTCAAACTTGCGCTTaGGGCGGAATGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QHLLSGSAPGLPEMLRPEAQTCA*GGMSCP
Trigger: AGGACAAGACATTCCGCCCCAAGCGCAAGTTTGAGC...CTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp CAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGGTTTTATTCCGTATCTaGCTGGGGGAGGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QHLLSGSAPGLPEMLRPEVLFRI*LGEGGL
Trigger: GAGACCACCCTCCCCCAGCCAGATACGGAATAAAAC...CTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp GATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGCGGAGAGAAGCGGGATaGTGGTTCCAGAGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: DAQAGEKRDDGSRASSSKRREAG*WFQSVL
Trigger: GAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCG...CTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR TCA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTGGTTGTGCCTCTGTGTaGAGAGACACCAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PEMLRPERSGMMVPERPPGCASV*RDTSGC
Trigger: GCAGCCGCTGGTGTCTCTTCACACAGAGGCACAACC...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGATCTTCCGCACCGTCTaGAGGAAGTTCTTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: CSAARPLVSLRCSGRREAIFRTV*RKFLGN
Trigger: GTTTCCCAAGAACTTCCTGCAGACGGTGCGGAAGAT...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCTGGTCTCCCTGAGATaGTCAGGCCGGAGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: PEMLRPERSGMMVPERPPLVSLR*SGRREA
Trigger: CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAG...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp GCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAGGCCAGGAGGTGGAGGATaGAGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: AGEKRDDGSRASSSKSPRPGGGG*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCATCCTCCACCTCCTGG...CCTCGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp GCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAGGTGCAGCTCGAAGCGCTaGGTGCCTGGCTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: AGEKRDDGSRASSSKSPRCSSKR*VPGSNL
Trigger: CAAGTTTGAGCCAGGCACCCAGCGCTTCGAGCTGCA...CCTCGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp ACGTCTGCGTCTGTAGTTTTATTCCGTATCTGGCTGGGGGAGGGTGGTCTCCGACCGGGGTGCAGGACGTaGGGTCCCAGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TSASVVLFRIWLGEGGLRPGCRT*GPRSPG
Trigger: TCCTGGACTCCTGGGACCCCACGTCCTGCACCCCGG...TCGGAGACCACCCTCCCCCAGCCAGATACGGAATAAAACTACAGACGCAGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp GACGGGGACAGCGTGCTTCTCTTCGGTGACCATCCCAGGCGCCCAGAGGTGACCTCCAAGTGCCGGACCTaGTGGTTTCTGGAAGGATCA +
Preference number: 4 (lower is better)
Translates to: DGDSVLLFGDHPRRPEVTSKCRT*WFLEGS
Trigger: TGATCCTTCCAGAAACCACCAGGTCCGGCACTTGGA...GGTCACCTCTGGGCGCCTGGGATGGTCACCGAAGAGAAGCACGCTGTCCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp GCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAGGAAAATTAGCCGGGTGTaGCGGTGGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: AGEKRDDGSRASSSKSPRKISRV*RWVPVV
Trigger: GACTACAGGCACCCACCGTCACACCCGGCTAATTTT...CCTCGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp GCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAGGGCTCTCCCGCGGACCTaGAATACACAGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: AGEKRDDGSRASSSKSPRALPRT*NTQGNH
Trigger: ATGATTCCCCTGTGTATTTCAGGTCCGCGGGAGAGC...CCTCGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592280.1
CDS-3UTR GCA 90 bp GCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAGGAGCCCATCTGCGCGATaGGGTCAAAGTGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: AGEKRDDGSRASSSKSPRSPSAR*GQSGGC
Trigger: ACATCCACCACTTTGACCGCATCGCGCAGATGGGCT...CCTCGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp GGCAGGAAGGACCACTGTGGTGAAAGGCCACTGACAATTCTGGTGAGGAGTAGGAGTCAGAAGCCGGGGTaGAGGACGTGGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRKDHCGERPLTILVRSRSQKPG*RTWGPR
Trigger: CCTGGGACCCCACGTCCTGCACCCCGGCTTCTGACT...CCTACTCCTCACCAGAATTGTCAGTGGCCTTTCACCACAGTGGTCCTTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp GAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCATGCAGCTCGAAGCGCTaGGTGCCTGGCTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: EMLRPERSGMMVPERPPPCSSKR*VPGSNL
Trigger: CAAGTTTGAGCCAGGCACCCAGCGCTTCGAGCTGCA...TGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTACGGAGTGCCAACGTTaGTGGGGAAGAGGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PEMLRPERSGMMVPERPPTECQR*WGRGPR
Trigger: ACGAGGACCTCTTCCCCACCAACGTTGGCACTCCGT...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp TGCGGGAGGAGATGTCCGCTCTCAGGGGCTCGGAAGCCCCTCAGCCTCTTGCCTTCTGCAGGAAGTTCTTaGGAAACGGAGTGCCAACGT +
Preference number: 4 (lower is better)
Translates to: CGRRCPLSGARKPLSLLPSAGSS*ETECQR
Trigger: ACGTTGGCACTCCGTTTCCCAAGAACTTCCTGCAGA...AGGCAAGAGGCTGAGGGGCTTCCGAGCCCCTGAGAGCGGACATCTCCTCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp CAGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGGTTTAAAAACACAGTaGGCTTTTCCGGTTGCTAGT +
Preference number: 4 (lower is better)
Translates to: QSVLLQVSEAPAAVRAPGGLKTQ*AFPVAS
Trigger: ACTAGCAACCGGAAAAGCCCACTGTGTTTTTAAACC...TCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp TGCGGGAGGAGATGTCCGCTCTCAGGGGCTCGGAAGCCCCTCAGCCTCTTGCCTACTACAATAATTTCCTaGGCGTGGTGGCGCACACCT +
Preference number: 4 (lower is better)
Translates to: CGRRCPLSGARKPLSLLPTTIIS*AWWRTP
Trigger: AGGTGTGCGCCACCACGCCCAGGAAATTATTGTAGT...AGGCAAGAGGCTGAGGGGCTTCCGAGCCCCTGAGAGCGGACATCTCCTCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGGCCTGGCCAACATGGTaGAATCTTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: CSAARPLVSLRCSGRREAAWPTW*NLVSTK
Trigger: TTTAGTAGAGACAAGATTTCACCATGTTGGCCAGGC...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp GGCAGGAAGGACCACTGTGGTGAAAGGCCACTGACAATTCTGGTGAGGAGTAGGAGGCGGAGCTTGCAGTaGGCCGAGATCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: GRKDHCGERPLTILVRSRRRSLQ*AEIPPL
Trigger: CAGTGGTGGGATCTCGGCTCACTGCAAGCTCCGCCT...CCTACTCCTCACCAGAATTGTCAGTGGCCTTTCACCACAGTGGTCCTTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGAACTTATGCTCATCCTaGCAGCGGTACTCATACTTG +
Preference number: 4 (lower is better)
Translates to: CSAARPLVSLRCSGRREANLCSS*QRYSYL
Trigger: CAAGTATGAGTACCGCTGGCAGGATGAGCATAAGTT...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTAGCCCATCTGCGCGATaGGGTCAAAGTGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: PEMLRPERSGMMVPERPPSPSAR*GQSGGC
Trigger: ACATCCACCACTTTGACCGCATCGCGCAGATGGGCT...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCTGGGTCCAGGTTGTaGCTCTGTGTGAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: PEMLRPERSGMMVPERPPPGSRL*LCVKRH
Trigger: GTGTCTCTTCACACAGAGGCACAACCTGGACCCAGG...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp CAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGCTTTTCTCAGGGCCCTaGTCTCACCTTCCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: QAGEKRDDGSRASSSKSPLFSGP*SHLPKV
Trigger: GACCTTTGGAAGGTGAGAGCAGGGCCCTGAGAAAAG...CGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp CTGAGGACCAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGTCATTTCTTTCAGTaGCTCCAGCTCCTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LRTNTCSAARPLVSLRCSGHFFQ*LQLLGV
Trigger: GACACCAAGGAGCTGGAGCCACTGAAAGAAATGACC...TGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTGGTCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGGCGTGGCCGGGCTGCTaGAGACATCCCGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKAWPGC*RHPEPW
Trigger: CCAGGGCTCGGGATGTCTCCAGCAGCCCGGCCACGC...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp GGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACCGGGGTTGGAGCTCCTaGGGACCAACACCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GETEVWVFGLHLPGTRRYRGWSS*GPTPAQ
Trigger: CTGAGCAGGTGTTGGTCCTCAGGAGCTCCAACCCCG...GTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTAGCAGGAGAATCACTTaGACCCAGGAGGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PEMLRPERSGMMVPERPPSRRIT*TQEVED
Trigger: ATCCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCT...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp GGCAGGAAGGACCACTGTGGTGAAAGGCCACTGACAATTCTGGTGAGGAGTAGGAGCCCCTCAGCCTCTTaGCTCCCCAACGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: GRKDHCGERPLTILVRSRSPSAS*LPNGRH
Trigger: ATGTCTCCCGTTGGGGAGGCAAGAGGCTGAGGGGCT...CCTACTCCTCACCAGAATTGTCAGTGGCCTTTCACCACAGTGGTCCTTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp GGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACCACACCAAGGCCTTCTaGGCTCCCCCGGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GETEVWVFGLHLPGTRRYHTKAF*APPVFP
Trigger: TGGGAAGACCGGGGGAGCCCAGAAGGCCTTGGTGTG...GTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp GAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAGCTCAAACTTGCGCTTaGGGCGGAATGTCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: EMLRPERSGMMVPERPPPAQTCA*GGMSCP
Trigger: AGGACAAGACATTCCGCCCCAAGCGCAAGTTTGAGC...TGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp CAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGCAGCCTCCTGGAAAGTaGAAGTGGTTTAAAAACACA +
Preference number: 4 (lower is better)
Translates to: QHLLSGSAPGLPEMLRPEQPPGK*KWFKNT
Trigger: TGTGTTTTTAAACCACTTCCACTTTCCAGGAGGCTG...CTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGCCCTGGGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGTATTCCGTATCTGGCTaGGGGAGGGTGGTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SPGGDRGVGVWASSSRYKYSVSG*GRVVSE
Trigger: CTCGGAGACCACCCTCCCCCAGCCAGATACGGAATA...CTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCCCAGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGATGACGGGGCAGGACTaGTCCGTGCAGCCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKMTGQD*SVQPSL
Trigger: CAGCGACGGCTGCACGGAGCAGTCCTGCCCCGTCAT...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp GATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGGAGTCCAGGAAGCCCTaGATACAGTCAGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: DAQAGEKRDDGSRASSSKESRKP*IQSAEC
Trigger: ACATTCAGCTGACTGTATCCAGGGCTTCCTGGACTC...CTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp CAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGGAAGTTTGCAGCATCTaGGAAAGGCCAATTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QAGEKRDDGSRASSSKSPEVCSI*ERPILA
Trigger: TGCCAGAATTGGCCTTTCCCAGATGCTGCAAACTTC...CGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp GAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAGGTACACAGAACTCATaGATTTTGGTCTCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: EMLRPERSGMMVPERPPPGTQNS*ILVSQP
Trigger: GGGCTGCGAGACCAAAATCCATGAGTTCTGTGTACC...TGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGCCAGGCGCCCAGAGGTaGCCAGACTTCTGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKPGAQR*PDFCVV
Trigger: GACCACACAGAAGTCTGGTCACCTCTGGGCGCCTGG...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp GAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCATCCTTGTTGAAGACTTaGTTCAGGAAGGGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: EMLRPERSGMMVPERPPPSLLKT*FRKGLD
Trigger: GTCCAACCCCTTCCTGAAGCAAGTCTTCAACAAGGA...TGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp CAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAACTTATGCTCATCCTaGCAGCGGTACTCATACTTG +
Preference number: 4 (lower is better)
Translates to: QAGEKRDDGSRASSSKSPNLCSS*QRYSYL
Trigger: CAAGTATGAGTACCGCTGGCAGGATGAGCATAAGTT...CGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp ATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTATCTTCCGCACCGTCTaGAGGAAGTTCTTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: MLRPERSGMMVPERPPPSIFRTV*RKFLGN
Trigger: GTTTCCCAAGAACTTCCTGCAGACGGTGCGGAAGAT...ACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CCA 90 bp ATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTGGACCTGGTGGTTTCTaGAAGGATCAAGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: MLRPERSGMMVPERPPPSGPGGF*KDQGQV
Trigger: GACTTGTCCTTGATCCTTCCAGAAACCACCAGGTCC...ACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGCCCTGGGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGGGGAGACAGAGGTGTaGGTGTTTGGGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SPGGDRGVGVWASSSRYKGETEV*VFGLHL
Trigger: AAGATGAAGCCCAAACACCCACACCTCTGTCTCCCC...CTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCCCAGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp GGGCCACACAGAAAAAGGGGTTCAACTGGAAGTTTGCAGCATCTGGGAAAGGCCAGAAGCAGAGTGCATTaGGGAAGAGAGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPHRKRGSTGSLQHLGKARSRVH*GRERAG
Trigger: CCCAGCCCTCTCTCTTCCTCAATGCACTCTGCTTCT...GGCCTTTCCCAGATGCTGCAAACTTCCAGTTGAACCCCTTTTTCTGTGTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp GGCAGGAAGGACCACTGTGGTGAAAGGCCACTGACAATTCTGGTGAGGAGTAGGCTGAAGTCAGGAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: GRKDHCGERPLTILVRSRLKSGV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTCCTGACTTCAG...CCTACTCCTCACCAGAATTGTCAGTGGCCTTTCACCACAGTGGTCCTTCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp ATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTTCCTTGTTGAAGACTTaGTTCAGGAAGGGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: MLRPERSGMMVPERPPPSSLLKT*FRKGLD
Trigger: GTCCAACCCCTTCCTGAAGCAAGTCTTCAACAAGGA...ACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR GCA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGGCTCGAAGCGCTGGGTaGCTGGCTCAAACTTGCGCT +
Preference number: 4 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKARSAG*LAQTCA
Trigger: AGCGCAAGTTTGAGCCAGGCACCCAGCGCTTCGAGC...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp GGGCCACACAGAAAAAGGGGTTCAACTGGAAGTTTGCAGCATCTGGGAAAGGCCGGCTTCCGGAACTTATaGTCATCCTGCCAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: GPHRKRGSTGSLQHLGKAGFRNL*SSCQRY
Trigger: GTACCGCTGGCAGGATGAGCATAAGTTCCGGAAGCC...GGCCTTTCCCAGATGCTGCAAACTTCCAGTTGAACCCCTTTTTCTGTGTGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR GCA 90 bp GGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACAGTGAGCCGAGATTGTaGCACTGGACTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GETEVWVFGLHLPGTRRYSEPRL*HWTPVW
Trigger: CCAGACTGGAGTCCAGTGGCACAATCTCGGCTCACT...GTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGGAAGCGCTGGGTGCCTaGCTCAAACTTGCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKEALGA*LKLALG
Trigger: CCCAAGCGCAAGTTTGAGCCAGGCACCCAGCGCTTC...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACATTTGCAGGTCCATGTACCTaGGCGCGGAGAGTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: RQRCGCLGFIFQVQGDTFAGPCT*ARRVPW
Trigger: CCACGGCACTCTCCGCGCCCAGGTACATGGACCTGC...AAATGTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
3UTR CAA 72 bp GGAGAGGCGTCCAGGGAGAGAAGAGTCCTGCTTGGGTaGATCATAAGCAAAGTGGACATCGTTCCGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GEASRERRVLLG*IISKVDIVPKR
Trigger: CCTCTTCGGAACGATGTCCACTTTGCTTATGATCAACCCAAGCAGGACTCTTCTCTCCCTGGACGCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGCCCTGGGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGACTTGTTCGATTTTCTaGCAGAAGCCAGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: SPGGDRGVGVWASSSRYKTCSIF*QKPGET
Trigger: CGTCTCTCCTGGCTTCTGCCAGAAAATCGAACAAGT...CTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCCCAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACATTTGCGCGGAGAGTGCCGTaGGCTTCCGGAACTTATGCT +
Preference number: 4 (lower is better)
Translates to: RQRCGCLGFIFQVQGDTFARRVP*ASGTYA
Trigger: AGCATAAGTTCCGGAAGCCCACGGCACTCTCCGCGC...AAATGTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp TTGATCATAAGCAAAGTGGACATCGTTCCGAAGAGGCAGAGAGCTCACTATGTTGGCTCCCCAGCGAGGTaGAGGCAGAAGTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LIISKVDIVPKRQRAHYVGSPAR*RQKFQE
Trigger: CTCCTGGAACTTCTGCCTCCACCTCGCTGGGGAGCC...AACATAGTGAGCTCTCTGCCTCTTCGGAACGATGTCCACTTTGCTTATGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp TTGATCATAAGCAAAGTGGACATCGTTCCGAAGAGGCAGAGAGCTCACTATGTTACCAGCGGCTGCCAGTaGGGAGTGCGGAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LIISKVDIVPKRQRAHYVTSGCQ*GVRSKG
Trigger: GCCTTTACTCCGCACTCCCCACTGGCAGCCGCTGGT...AACATAGTGAGCTCTCTGCCTCTTCGGAACGATGTCCACTTTGCTTATGATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp AGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACATTTAGGTGGAGGATGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: RQRCGCLGFIFQVQGDTFRWRMQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCATCCTCCACCT...AAATGTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp GCTTGGGTTGATCATAAGCAAAGTGGACATCGTTCCGAAGAGGCAGAGAGCTCACGGACGAGACACAAGTaGCCCTTGGAAACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: AWVDHKQSGHRSEEAESSRTRHK*PLETSD
Trigger: ATCAGAAGTTTCCAAGGGTCACTTGTGTCTCGTCCG...TGAGCTCTCTGCCTCTTCGGAACGATGTCCACTTTGCTTATGATCAACCCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACATTTGTGATTCCAGCACTTTaGGAGGCCGAGGATGGAGGA +
Preference number: 4 (lower is better)
Translates to: RQRCGCLGFIFQVQGDTFVIPAL*EAEDGG
Trigger: TCCTCCATCCTCGGCCTCCCAAAGTGCTGGAATCAC...AAATGTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGATCAAGGACAAGTCCTaGGAGTTTCAGGCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKIKDKS*EFQASA
Trigger: TGCCGAAGCCTGAAACTCCCAGGACTTGTCCTTGAT...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp ACGTCTGCGTCTGTAGTTTTATTCCGTATCTGGCTGGGGGAGGGTGGTCTCCGAAAATCAAACCCTTTATaGTACACAAAGGGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: TSASVVLFRIWLGEGGLRKSNPL*YTKGPL
Trigger: TAAGGGCCCCTTTGTGTATCATAAAGGGTTTGATTT...TCGGAGACCACCCTCCCCCAGCCAGATACGGAATAAAACTACAGACGCAGACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGGACACAAGTGACCCTTaGAAACTTCTGATCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKDTSDP*KLLIAS
Trigger: AGAGGCGATCAGAAGTTTCCAAGGGTCACTTGTGTC...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACATTTAGAGGTGTGGGTGTTTaGGCTTCATCTTCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RQRCGCLGFIFQVQGDTFRGVGV*ASSSRY
Trigger: GTACCTGGAAGATGAAGCCCAAACACCCACACCTCT...AAATGTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR TCA 90 bp AGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACATTTCTGGATACAGTCAGCTaGATGTTTCGGAAGAACGGA +
Preference number: 4 (lower is better)
Translates to: RQRCGCLGFIFQVQGDTFLDTVS*MFRKNG
Trigger: TCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAG...AAATGTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CCA 90 bp AGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGAGATACATTTAAAAAGGGGTTCAACTaGAAGTTTGCAGCATCTGGG +
Preference number: 4 (lower is better)
Translates to: RQRCGCLGFIFQVQGDTFKKGFN*KFAASG
Trigger: CCCAGATGCTGCAAACTTCCAGTTGAACCCCTTTTT...AAATGTATCTCCTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS CCA 90 bp CCCGGGCGGCGAAGGCGCACGGAGCCAAGTTCCGGGCAGCAGCCCTaGGATGCCCTGAGCCGGGCCGGGCGGAGGTCTCCGTTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: PGRRRRTEPSSGQQP*DALSRAGRRSPLPS
Trigger: GCTAGGCAACGGAGACCTCCGCCCGGCCCGGCTCAGGGCATCCCAGGGCTGCTGCCCGGAACTTGGCTCCGTGCGCCTTCGCCGCCCGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589902.5
CDS TCA 90 bp GAAGGCGCACGGAGCCAAGTTCCGGGCAGCAGCCCTGGGATGCCCTaGGCCGGGCCGGGCGGAGGTCTCCGTTGCCTAGCAACCGGGGCC +
Preference number: 5 (lower is better)
Translates to: EGARSQVPGSSPGMP*AGPGGGLRCLATGA
Trigger: GGCCCCGGTTGCTAGGCAACGGAGACCTCCGCCCGGCCCGGCTCAGGGCATCCCAGGGCTGCTGCCCGGAACTTGGCTCCGTGCGCCTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589902.5
CDS-3UTR CAA 90 bp TCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGGCTATCTGCCGTCCGGGGTaGGAGCTCCTGAGGACCAAC +
Preference number: 5 (lower is better)
Translates to: SKSPRPQRRFGHRETRGAICRPG*ELLRTN
Trigger: GTTGGTCCTCAGGAGCTCCAACCCCGGACGGCAGAT...AGCCCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS CCA 90 bp GCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGGCTCTCAGTaGCACATCCGGGCGGTCATTTCTTTCAGTGGCTCCAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: APAAVRAPGDPRGSQ*HIRAVISFSGSSSL
Trigger: CAAGGAGCTGGAGCCACTGAAAGAAATGACCGCCCGGATGTGCCACTGAGAGCCCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp GTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGAACGGAGTGCCAACGTaGGTGGGGAAGAGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: VLLQVSEAPAAVRAPGDPNGVPT*VGKRSS
Trigger: CGAGGACCTCTTCCCCACCAACGTTGGCACTCCGTT...CGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp TCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGGCTCTGCCTGGGTCCAGGTaGTGCCTCTGTGTGAAGAGA +
Preference number: 5 (lower is better)
Translates to: SKSPRPQRRFGHRETRGALPGSR*CLCVKR
Trigger: TCTCTTCACACAGAGGCACAACCTGGACCCAGGCAG...AGCCCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp TCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGACCCGCGGGGCTGTCTGCAGGAAGTTCTaGGGAAACGGAGTGCCAACG +
Preference number: 5 (lower is better)
Translates to: SKSPRPQRRFGHRETRGAVCRKF*GNGVPT
Trigger: CGTTGGCACTCCGTTTCCCAAGAACTTCCTGCAGAC...AGCCCCGCGGGTCTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp CAGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGGCTCAAACTTGCGCTaGGGGCGGAATGTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: QSVLLQVSEAPAAVRAPGGSNLR*GRNVLS
Trigger: GGACAAGACATTCCGCCCCAAGCGCAAGTTTGAGCC...TCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGATCTGCCGTCCGGGGTaGGAGCTCCTGAGGACCAAC +
Preference number: 5 (lower is better)
Translates to: CSAARPLVSLRCSGRREAICRPG*ELLRTN
Trigger: GTTGGTCCTCAGGAGCTCCAACCCCGGACGGCAGAT...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS GCA 90 bp TTCCTTCCGGAGGTTTCCACATCCTGCCACTGCCTCGGGGACCGCTaGCCCAGAGCACGGGAGGCGCCTGAGAGACAAGCCCTGAGTGGA +
Preference number: 5 (lower is better)
Translates to: FLPEVSTSCHCLGDR*PRAREAPERQALSG
Trigger: TCCACTCAGGGCTTGTCTCTCAGGCGCCTCCCGTGCTCTGGGGCAGCGGTCCCCGAGGCAGTGGCAGGATGTGGAAACCTCCGGAAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586676.5
CDS-3UTR CAA 90 bp AGAGCGTCCTCCTCCAAGTCTCCGAGGCCCCAGCGGCGGTTCGGGCACCGGGAGAAGAGGTCCTCGTTGTaGATCTGCGCCTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: RASSSKSPRPQRRFGHREKRSSL*ICASIQ
Trigger: CTGGATCGAGGCGCAGATCAACAACGAGGACCTCTT...CTCCCGGTGCCCGAACCGCCGCTGGGGCCTCGGAGACTTGGAGGAGGACGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGGGGAAGAGGTCCTCGTaGTTGATCTGCGCCTCGATC +
Preference number: 5 (lower is better)
Translates to: CSAARPLVSLRCSGRREAGKRSS*LICASI
Trigger: GATCGAGGCGCAGATCAACAACGAGGACCTCTTCCC...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS GCA 90 bp ATCCATCTTAGCCCAGCCAAGTCCGCATCCCCAGAGCTCCGCAGCTaGCAGGCGCTTCTGAAACCAGCATCTGCAGCCCGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: IHLSPAKSASPELRS*QALLKPASAARQSW
Trigger: CCAGCTCTGCCGGGCTGCAGATGCTGGTTTCAGAAGCGCCTGGCAGCTGCGGAGCTCTGGGGATGCGGACTTGGCTGGGCTAAGATGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591326.5
CDS-3UTR CAA 90 bp CCAGCGGCTGCCAGTGGGGAGTGCGGAGTAAAGGCCTGCGGGAGGAGATGTCCGTGCTTCAGGAAGGGGTaGGACATCTTGGTGACGCCT +
Preference number: 5 (lower is better)
Translates to: PAAASGECGVKACGRRCPCFRKG*DILVTP
Trigger: AGGCGTCACCAAGATGTCCAACCCCTTCCTGAAGCA...CGGACATCTCCTCCCGCAGGCCTTTACTCCGCACTCCCCACTGGCAGCCGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp CAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGTGCTTCAGGAAGGGGTaGGACATCTTGGTGACGCCT +
Preference number: 5 (lower is better)
Translates to: QHLLSGSAPGLPEMLRPECFRKG*DILVTP
Trigger: AGGCGTCACCAAGATGTCCAACCCCTTCCTGAAGCA...CTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp GATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGGACGCCTGCGCCTTCTaGTGCAGCTCGAAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: DAQAGEKRDDGSRASSSKDACAF*CSSKRW
Trigger: CCAGCGCTTCGAGCTGCACAAGAAGGCGCAGGCGTC...CTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGGTCTGCAGGAAGTTCTaGGGAAACGGAGTGCCAACG +
Preference number: 5 (lower is better)
Translates to: CSAARPLVSLRCSGRREAVCRKF*GNGVPT
Trigger: CGTTGGCACTCCGTTTCCCAAGAACTTCCTGCAGAC...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp TGCGGGAGGAGATGTCCGCTCTCAGGGGCTCGGAAGCCCCTCAGCCTCTTGCCTTGTGATTCCAGCACTTaGGGAGGCCGAGGATGGAGG +
Preference number: 5 (lower is better)
Translates to: CGRRCPLSGARKPLSLLPCDSST*GGRGWR
Trigger: CCTCCATCCTCGGCCTCCCAAAGTGCTGGAATCACA...AGGCAAGAGGCTGAGGGGCTTCCGAGCCCCTGAGAGCGGACATCTCCTCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp CTGAGGACCAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGGAAGAGGTCCTCGTaGTTGATCTGCGCCTCGATC +
Preference number: 5 (lower is better)
Translates to: LRTNTCSAARPLVSLRCSGKRSS*LICASI
Trigger: GATCGAGGCGCAGATCAACAACGAGGACCTCTTCCC...TGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTGGTCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp GATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGAAGCCCCTCAGCCTCTaGCCTCCCCAACGGGAGACA +
Preference number: 5 (lower is better)
Translates to: DAQAGEKRDDGSRASSSKKPLSL*PPQRET
Trigger: TGTCTCCCGTTGGGGAGGCAAGAGGCTGAGGGGCTT...CTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp TGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGAAGCGGTCCTTGTTGAAGACTaGCTTCAGGAAGGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: CSAARPLVSLRCSGRREAVLVED*LQEGVG
Trigger: TCCAACCCCTTCCTGAAGCAAGTCTTCAACAAGGAC...CGCTTCTCTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTGTGCCTGGCTCAAACTaGCGCTTGGGGCGGAATGTC +
Preference number: 5 (lower is better)
Translates to: PEMLRPERSGMMVPERPPVPGSN*RLGRNV
Trigger: GACATTCCGCCCCAAGCGCAAGTTTGAGCCAGGCAC...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp GATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGAGTGGCTCCAGCTCCTaGGTGTCGATGAGGCCGAAC +
Preference number: 5 (lower is better)
Translates to: DAQAGEKRDDGSRASSSKSGSSS*VSMRPN
Trigger: GTTCGGCCTCATCGACACCAAGGAGCTGGAGCCACT...CTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTAAGGGGTTGGACATCTaGGTGACGCCTGCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: PEMLRPERSGMMVPERPPKGLDI*VTPALL
Trigger: CAGGAGAGCAGGCGTCACCAAGATGTCCAACCCCTT...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp GAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAGGCTCAAACTTGCGCTaGGGGCGGAATGTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: EMLRPERSGMMVPERPPPGSNLR*GRNVLS
Trigger: GGACAAGACATTCCGCCCCAAGCGCAAGTTTGAGCC...TGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp GGCAGGAAGGACCACTGTGGTGAAAGGCCACTGACAATTCTGGTGAGGAGTAGGGACGCCTGCGCCTTCTaGTGCAGCTCGAAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: GRKDHCGERPLTILVRSRDACAF*CSSKRW
Trigger: CCAGCGCTTCGAGCTGCACAAGAAGGCGCAGGCGTC...CCTACTCCTCACCAGAATTGTCAGTGGCCTTTCACCACAGTGGTCCTTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp ATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTAACGGAGTGCCAACGTaGGTGGGGAAGAGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: MLRPERSGMMVPERPPPSNGVPT*VGKRSS
Trigger: CGAGGACCTCTTCCCCACCAACGTTGGCACTCCGTT...ACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp CTGAGGACCAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGTTCAACTGGAAGTTaGCAGCATCTGGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: LRTNTCSAARPLVSLRCSGSTGS*QHLGKA
Trigger: GGCCTTTCCCAGATGCTGCAAACTTCCAGTTGAACC...TGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTGGTCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS TCA 90 bp GGGACCGCTGCCCCAGAGCACGGGAGGCGCCTGAGAGACAAGCCCTaGGTGGAGAAGTCAGTTCCATATGTTCTAGGTCAGTGCACAACA +
Preference number: 5 (lower is better)
Translates to: GTAAPEHGRRLRDKP*VEKSVPYVLGQCTT
Trigger: TGTTGTGCACTGACCTAGAACATATGGAACTGACTTCTCCACTCAGGGCTTGTCTCTCAGGCGCCTCCCGTGCTCTGGGGCAGCGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586676.5
CDS-3UTR CAA 90 bp AGCCCTGGGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGGTGCCTGGCTCAAACTaGCGCTTGGGGCGGAATGTC +
Preference number: 5 (lower is better)
Translates to: SPGGDRGVGVWASSSRYKVPGSN*RLGRNV
Trigger: GACATTCCGCCCCAAGCGCAAGTTTGAGCCAGGCAC...CTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCCCAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp CCTGAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTAAGAGGTCCTCGTTGTaGATCTGCGCCTCGATCCAG +
Preference number: 5 (lower is better)
Translates to: PEMLRPERSGMMVPERPPKRSSL*ICASIQ
Trigger: CTGGATCGAGGCGCAGATCAACAACGAGGACCTCTT...AGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS-3UTR CAA 90 bp AGCCCTGGGGGAGACAGAGGTGTGGGTGTTTGGGCTTCATCTTCCAGGTACAAGAGTGGCTCCAGCTCCTaGGTGTCGATGAGGCCGAAC +
Preference number: 5 (lower is better)
Translates to: SPGGDRGVGVWASSSRYKSGSSS*VSMRPN
Trigger: GTTCGGCCTCATCGACACCAAGGAGCTGGAGCCACT...CTTGTACCTGGAAGATGAAGCCCAAACACCCACACCTCTGTCTCCCCCAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp GCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAGGATTTCATGGAGTTCTTaGAGGGCTCGGCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: AGEKRDDGSRASSSKSPRISWSS*RARLGG
Trigger: ACCTCCCAGCCGAGCCCTCAAAGAACTCCATGAAAT...CCTCGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp GCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCAAGTCTCCGAGGCAGAGGTGTGGGTGTTaGGGCTTCATCTTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: AGEKRDDGSRASSSKSPRQRCGC*GFIFQV
Trigger: TACCTGGAAGATGAAGCCCAAACACCCACACCTCTG...CCTCGGAGACTTGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp CAACACCTGCTCAGCGGCTCGGCCCCTGGTCTCCCTGAGATGCTCAGGCCGGAGAGTGGGCTTTTCCGGTaGCTAGTAACACATAGAATT +
Preference number: 5 (lower is better)
Translates to: QHLLSGSAPGLPEMLRPESGLFR*LVTHRI
Trigger: AATTCTATGTGTTACTAGCAACCGGAAAAGCCCACT...CTCCGGCCTGAGCATCTCAGGGAGACCAGGGGCCGAGCCGCTGAGCAGGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp GGGCCACACAGAAAAAGGGGTTCAACTGGAAGTTTGCAGCATCTGGGAAAGGCCAAGGGGTTGGACATCTaGGTGACGCCTGCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GPHRKRGSTGSLQHLGKAKGLDI*VTPALL
Trigger: CAGGAGAGCAGGCGTCACCAAGATGTCCAACCCCTT...GGCCTTTCCCAGATGCTGCAAACTTCCAGTTGAACCCCTTTTTCTGTGTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS-3UTR CAA 90 bp GAGATGCTCAGGCCGGAGAGAAGCGGGATGATGGTTCCAGAGCGTCCTCCTCCACGGAATGTCTTGTCCTaGTTGAAGACTTGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: EMLRPERSGMMVPERPPPRNVLS*LKTCFR
Trigger: CCTGAAGCAAGTCTTCAACAAGGACAAGACATTCCG...TGGAGGAGGACGCTCTGGAACCATCATCCCGCTTCTCTCCGGCCTGAGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS TCA 90 bp AAGGCCTTCTGGGCTCCCCCGGTCTTCCCACGGACGAGACACAAGTaGCCCTTGGAAACTTCTAGAGAAATGAAAGGTGAAATGACAAAT +
Preference number: 5 (lower is better)
Translates to: KAFWAPPVFPRTRHK*PLETSREMKGEMTN
Trigger: ATTTGTCATTTCACCTTTCATTTCTCTAGAAGTTTCCAAGGGTCACTTGTGTCTCGTCCGTGGGAAGACCGGGGGAGCCCAGAAGGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591638.1
CDS-3UTR CAA 90 bp AGTCCAGGAAGCCCTGGATACAGTCAGCTGAATGTTTCGGAAGAACGGAAGAAGAGAGTCCTGCTTGGGTaGATCATAAGCAAAGTGGAC +
Preference number: 5 (lower is better)
Translates to: SPGSPGYSQLNVSEERKKRVLLG*IISKVD
Trigger: GTCCACTTTGCTTATGATCAACCCAAGCAGGACTCT...CTTCTTCCGTTCTTCCGAAACATTCAGCTGACTGTATCCAGGGCTTCCTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS CAA 90 bp CAGCAGCCCTGGGATGCCCTGAGCCGGGCCGGGCGGAGGTCTCCGTaGCCTAGCAACCGGGGCCGCGGCCTGTGGGCGGAGCCTGCACCG +
Preference number: 6 (lower is better)
Translates to: QQPWDALSRAGRRSP*PSNRGRGLWAEPAP
Trigger: CGGTGCAGGCTCCGCCCACAGGCCGCGGCCCCGGTTGCTAGGCAACGGAGACCTCCGCCCGGCCCGGCTCAGGGCATCCCAGGGCTGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589902.5
CDS CAA 72 bp TGGGATGCCCTGAGCCGGGCCGGGCGGAGGTCTCCGTaGCCTAGCAACCGGGGCCGCGGCCTGTGGGCGGAG +
Preference number: 6 (lower is better)
Translates to: WDALSRAGRRSP*PSNRGRGLWAE
Trigger: CTCCGCCCACAGGCCGCGGCCCCGGTTGCTAGGCAACGGAGACCTCCGCCCGGCCCGGCTCAGGGCATCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589902.5
CDS GCA 72 bp GCGCACGGAGCCAAGTTCCGGGCAGCAGCCCTGGGATaGCCTGAGCCGGGCCGGGCGGAGGTCTCCGTTGCC +
Preference number: 6 (lower is better)
Translates to: AHGAKFRAAALG*PEPGRAEVSVA
Trigger: GGCAACGGAGACCTCCGCCCGGCCCGGCTCAGGGCATCCCAGGGCTGCTGCCCGGAACTTGGCTCCGTGCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589902.5
CDS CCA 72 bp AGGTCTCCGTTGCCTAGCAACCGGGGCCGCGGCCTGTaGGCGGAGCCTGCACCGTGGCTGCGACACGGGGCG +
Preference number: 6 (lower is better)
Translates to: RSPLPSNRGRGL*AEPAPWLRHGA
Trigger: CGCCCCGTGTCGCAGCCACGGTGCAGGCTCCGCCCACAGGCCGCGGCCCCGGTTGCTAGGCAACGGAGACCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589902.5
CDS TCA 72 bp CGGAGCCAAGTTCCGGGCAGCAGCCCTGGGATGCCCTaGGCCGGGCCGGGCGGAGGTCTCCGTTGCCTAGCA +
Preference number: 6 (lower is better)
Translates to: RSQVPGSSPGMP*AGPGGGLRCLA
Trigger: TGCTAGGCAACGGAGACCTCCGCCCGGCCCGGCTCAGGGCATCCCAGGGCTGCTGCCCGGAACTTGGCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589902.5
CDS GCA 72 bp TCCTTAAAGGGCCCGGGGCTCCGCGCAGAAGCGGCGTaGAGGGGTCTCCCAGACTCGGTCCCGCGGGCTTTA +
Preference number: 6 (lower is better)
Translates to: SLKGPGLRAEAA*RGLPDSVPRAL
Trigger: TAAAGCCCGCGGGACCGAGTCTGGGAGACCCCTGCACGCCGCTTCTGCGCGGAGCCCCGGGCCCTTTAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589902.5
ENST00000591236.1
CDS GCA 72 bp GAGGTTTCCACATCCTGCCACTGCCTCGGGGACCGCTaGCCCAGAGCACGGGAGGCGCCTGAGAGACAAGCC +
Preference number: 6 (lower is better)
Translates to: EVSTSCHCLGDR*PRAREAPERQA
Trigger: GGCTTGTCTCTCAGGCGCCTCCCGTGCTCTGGGGCAGCGGTCCCCGAGGCAGTGGCAGGATGTGGAAACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586676.5
CDS CCA 72 bp GCGGTTCGGGCACCGGGAGACCCGCGGGGCTCTCAGTaGCACATCCGGGCGGTCATTTCTTTCAGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: AVRAPGDPRGSQ*HIRAVISFSGS
Trigger: GGAGCCACTGAAAGAAATGACCGCCCGGATGTGCCACTGAGAGCCCCGCGGGTCTCCCGGTGCCCGAACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS CCA 72 bp GCGGTTCGGGCACCGGGAGACCCGCGGGGCTCTCAGTaGCACATCCGGGCGGTCATTTCTTTCGTGTCTGGG +
Preference number: 6 (lower is better)
Translates to: AVRAPGDPRGSQ*HIRAVISFVSG
Trigger: CCCAGACACGAAAGAAATGACCGCCCGGATGTGCCACTGAGAGCCCCGCGGGTCTCCCGGTGCCCGAACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592143.2
CDS CAA 72 bp AGGTCCAGCCCGGCGTTCAGCGACGCCTGCGCCTTCTaGTGCAGCTCGAAGCGCTGGGTGCCTGGCTCAAAC +
Preference number: 6 (lower is better)
Translates to: RSSPAFSDACAF*CSSKRWVPGSN
Trigger: GTTTGAGCCAGGCACCCAGCGCTTCGAGCTGCACAAGAAGGCGCAGGCGTCGCTGAACGCCGGGCTGGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357066.8
ENST00000589902.5
ENST00000591236.1
ENST00000591326.5
ENST00000591638.1
ENST00000592280.1
CDS TCA 72 bp TGGGCTCCCCCGGTCTTCCCACGGACGAGACACAAGTaGCCCTTGGAAACTTCTGATCGCCTCTGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: WAPPVFPRTRHK*PLETSDRLCRP
Trigger: CGGGCGGCAGAGGCGATCAGAAGTTTCCAAGGGTCACTTGTGTCTCGTCCGTGGGAAGACCGGGGGAGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357066.8
CDS TCA 72 bp TGGGCTCCCCCGGTCTTCCCACGGACGAGACACAAGTaGCCCTTGGAAATTTCCTTAAAGGGCCCGGGGCTC +
Preference number: 6 (lower is better)
Translates to: WAPPVFPRTRHK*PLEISLKGPGL
Trigger: GAGCCCCGGGCCCTTTAAGGAAATTTCCAAGGGTCACTTGTGTCTCGTCCGTGGGAAGACCGGGGGAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591236.1
CDS GCA 72 bp GTCCATCAGCAGGTCCATGTACCTGGGCGCGGAGAGTaGCGTGGGCTTCCGGAACTTATGCTCATCCTGCCA +
Preference number: 6 (lower is better)
Translates to: VHQQVHVPGRGE*RGLPELMLILP
Trigger: TGGCAGGATGAGCATAAGTTCCGGAAGCCCACGGCACTCTCCGCGCCCAGGTACATGGACCTGCTGATGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS TCA 72 bp TGGGCTCCCCCGGTCTTCCCACGGACGAGACACAAGTaGCCCTTGGAAACTTTTTCCTTAAAGGGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: WAPPVFPRTRHK*PLETFSLKGPG
Trigger: CCCCGGGCCCTTTAAGGAAAAAGTTTCCAAGGGTCACTTGTGTCTCGTCCGTGGGAAGACCGGGGGAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589902.5
CDS GCA 72 bp ACGCGGAACAGCCGCGACAGGATCTTCCGCACCGTCTaGAGGAAGTTCTTGGGAAACGGAGTGCCAACGTTG +
Preference number: 6 (lower is better)
Translates to: TRNSRDRIFRTV*RKFLGNGVPTL
Trigger: CAACGTTGGCACTCCGTTTCCCAAGAACTTCCTGCAGACGGTGCGGAAGATCCTGTCGCGGCTGTTCCGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS CAA 72 bp CGCGACAGGATCTTCCGCACCGTCTGCAGGAAGTTCTaGGGAAACGGAGTGCCAACGTTGGTGGGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: RDRIFRTVCRKF*GNGVPTLVGKR
Trigger: CCTCTTCCCCACCAACGTTGGCACTCCGTTTCCCAAGAACTTCCTGCAGACGGTGCGGAAGATCCTGTCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS TCA 72 bp GCCCCAGAGCACGGGAGGCGCCTGAGAGACAAGCCCTaGGTGGAGAAGTCAGTTCCATATGTTCTAGGTCAG +
Preference number: 6 (lower is better)
Translates to: APEHGRRLRDKP*VEKSVPYVLGQ
Trigger: CTGACCTAGAACATATGGAACTGACTTCTCCACTCAGGGCTTGTCTCTCAGGCGCCTCCCGTGCTCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586676.5
CDS TCA 72 bp TGGGCTCCCCCGGTCTTCCCACGGACGAGACACAAGTaGCCCTTGGAAACTTTTCCTTCCGGAGGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: WAPPVFPRTRHK*PLETFPSGGFH
Trigger: GTGGAAACCTCCGGAAGGAAAAGTTTCCAAGGGTCACTTGTGTCTCGTCCGTGGGAAGACCGGGGGAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586676.5
CDS CCA 72 bp GCGACAGGATCTTCCGCACCGTCTGCAGGAAGTTCTTaGGAAACGGAGTGCCAACGTTGGTGGGGAAGAGGT +
Preference number: 6 (lower is better)
Translates to: ATGSSAPSAGSS*ETECQRWWGRG
Trigger: ACCTCTTCCCCACCAACGTTGGCACTCCGTTTCCCAAGAACTTCCTGCAGACGGTGCGGAAGATCCTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357066.8
ENST00000592280.1
CDS CAA 90 bp TGGGTGCCTGGCTCAAACTTGCGCTTGGGGCGGAATGTCTTGTCCTaGTTGAAGACTTGCTTCAGGAAGGGGTTGGACATCTTGGTGACG +
Preference number: 6 (lower is better)
Translates to: WVPGSNLRLGRNVLS*LKTCFRKGLDILVT
Trigger: CGTCACCAAGATGTCCAACCCCTTCCTGAAGCAAGTCTTCAACAAGGACAAGACATTCCGCCCCAAGCGCAAGTTTGAGCCAGGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357066.8
ENST00000586676.5
ENST00000589902.5
ENST00000591236.1
ENST00000591326.5
ENST00000591638.1
ENST00000592280.1
CDS TCA 72 bp TGGGCTCCCCCGGTCTTCCCACGGACGAGACACAAGTaGCCCTTGGAAACTTCTAGAGAAATGAAAGGTGAA +
Preference number: 6 (lower is better)
Translates to: WAPPVFPRTRHK*PLETSREMKGE
Trigger: TTCACCTTTCATTTCTCTAGAAGTTTCCAAGGGTCACTTGTGTCTCGTCCGTGGGAAGACCGGGGGAGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591638.1
CDS CAA 72 bp GGCTCAAACTTGCGCTTGGGGCGGAATGTCTTGTCCTaGTTGAAGACTTGCTTCAGGAAGGGGTTGGACATC +
Preference number: 6 (lower is better)
Translates to: GSNLRLGRNVLS*LKTCFRKGLDI
Trigger: GATGTCCAACCCCTTCCTGAAGCAAGTCTTCAACAAGGACAAGACATTCCGCCCCAAGCGCAAGTTTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357066.8
ENST00000586676.5
ENST00000589902.5
ENST00000591236.1
ENST00000591326.5
ENST00000591638.1
ENST00000592280.1