Pregenerated sensors for MNS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000138587Ensembl transcript IDs: ENST00000260453.4, ENST00000558694.1, ENST00000566386.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACTGTCTTGAGGATGGGGATGCAAACAGTGCTCTGTAGTGTTGTAGAAATCGGAAATCCAAACAGACAATaGATACCTAATGCCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: TVLRMGMQTVLCSVVEIGNPNRQ*IPNATE Trigger: TTCAGTGGCATTAGGTATCCATTGTCTGTTTGGATT...TCCGATTTCTACAACACTACAGAGCACTGTTTGCATCCCCATCCTCAAGACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| 3UTR CAA 90 bp | CACTTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATACTGTCTaGAGGATGGGGATGCAAACAGTGCTCTGTAGTGTTGTAGAAATC | + |
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Preference number: 2 (lower is better) Translates to: HFGVEFCISQGKYTV*RMGMQTVLCSVVEI Trigger: GATTTCTACAACACTACAGAGCACTGTTTGCATCCCCATCCTCAAGACAGTATATTTACCTTGACTAATACAGAACTCTACCCCAAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | ACTGTCTTGAGGATGGGGATGCAAACAGTGCTCTGTAGTGTTGTAGAAATCGGAAGGAGCGCACCTGGCTaGGCGCGCTCGGGTGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: TVLRMGMQTVLCSVVEIGRSAPG*ARSGVY Trigger: GTAAACACCCGAGCGCGCGCAGCCAGGTGCGCTCCT...TCCGATTTCTACAACACTACAGAGCACTGTTTGCATCCCCATCCTCAAGACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CCA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTCCCAAGGAGCGCACCTaGCTGCGCGCGCTCGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGPKERT*LRALGC Trigger: ACACCCGAGCGCGCGCAGCCAGGTGCGCTCCTTGGG...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CCA 90 bp | GTAGAGTTCTGTATTAGTCAAGGTAAATATACTGTCTTGAGGATGGGGATGCAAGCGTCTTGGCAACGGTaGAGCTGCGCGCCCTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: VEFCISQGKYTVLRMGMQASWQR*SCAPSA Trigger: AGCGGAGGGCGCGCAGCTCCACCGTTGCCAAGACGC...TTGCATCCCCATCCTCAAGACAGTATATTTACCTTGACTAATACAGAACTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | ACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATGGCAACGGTGGAGCTaGGCGCCCTCCGCTCGACCA | + |
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Preference number: 4 (lower is better) Translates to: TDNGYLMPLNCKTKVMLTWQRWS*APSARP Trigger: TGGTCGAGCGGAGGGCGCGCAGCTCCACCGTTGCCA...TGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CCA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTGTTTACGCGGCGTCTTaGCAACGGTGGAGCTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGVYAAS*QRWSCA Trigger: CGCGCAGCTCCACCGTTGCCAAGACGCCGCGTAAAC...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CCA 90 bp | CAAACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGAAATACCCCCTCTCGTaGGACCGCGGCCACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: QTDNGYLMPLNCKTKVMLKYPLS*DRGHHL Trigger: GAGGTGGTGGCCGCGGTCCCACGAGAGGGGGTATTT...CAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR TCA 90 bp | CCCTGGCTAAATCAAGTAAGTAAAGTTCGTAAACACAGACAGAAGGCAGTTCACGGAACCCATCTTGGCTaGCGAAAAATACCCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: PWLNQVSKVRKHRQKAVHGTHLG*RKIPPL Trigger: GAGAGGGGGTATTTTTCGTCAGCCAAGATGGGTTCC...GTGAACTGCCTTCTGTCTGTGTTTACGAACTTTACTTACTTGATTTAGCCAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTCCTTGCCGCCTTTGCTaGAACTGCCACTCTTCTAGT | + |
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Preference number: 4 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGPCRLC*NCHSSS Trigger: ACTAGAAGAGTGGCAGTTGCAGCAAAGGCGGCAAGG...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | TTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATACTGTCTTGAGGATGGGGAATCCTTGCCGCCTTTaGTGCAACTGCCACTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FGVEFCISQGKYTVLRMGNPCRL*CNCHSS Trigger: AGAAGAGTGGCAGTTGCAGCAAAGGCGGCAAGGATT...CCCCATCCTCAAGACAGTATATTTACCTTGACTAATACAGAACTCTACCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | ACTGTCTTGAGGATGGGGATGCAAACAGTGCTCTGTAGTGTTGTAGAAATCGGATCTTCTCTTTGCTGCTaGATGTTAGCAAACTCTATG | + |
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Preference number: 4 (lower is better) Translates to: TVLRMGMQTVLCSVVEIGSSLCC*MLANSM Trigger: CATAGAGTTTGCTAACATGCAGCAGCAAAGAGAAGA...TCCGATTTCTACAACACTACAGAGCACTGTTTGCATCCCCATCCTCAAGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR TCA 90 bp | GTAGAGTTCTGTATTAGTCAAGGTAAATATACTGTCTTGAGGATGGGGATGCAATGTGTCAACGCATTCTaGAGCTGTAGCCTTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VEFCISQGKYTVLRMGMQCVNAF*SCSLFS Trigger: GGAGAAAAGGCTACAGCTTCAGAATGCGTTGACACA...TTGCATCCCCATCCTCAAGACAGTATATTTACCTTGACTAATACAGAACTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR TCA 90 bp | ACTGTCTTGAGGATGGGGATGCAAACAGTGCTCTGTAGTGTTGTAGAAATCGGAAAACAAAAGTTATGCTaGCATCTAGTGGTAACATGC | + |
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Preference number: 4 (lower is better) Translates to: TVLRMGMQTVLCSVVEIGKQKLC*HLVVTC Trigger: GCATGTTACCACTAGATGTCAGCATAACTTTTGTTT...TCCGATTTCTACAACACTACAGAGCACTGTTTGCATCCCCATCCTCAAGACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | ACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACACGCCTTTGCTGCAACTaGCACTCTTCTAGTTCACGT | + |
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Preference number: 4 (lower is better) Translates to: TDNGYLMPLNCKTKVMLTRLCCN*HSSSSR Trigger: ACGTGAACTAGAAGAGTGGCAGTTGCAGCAAAGGCG...TGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CCA 90 bp | TTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATACTGTCTTGAGGATGGGGTTTTGGAACCCATCTTaGCTGACGAAAAATACCCCC | + |
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Preference number: 4 (lower is better) Translates to: FGVEFCISQGKYTVLRMGFWNPS*LTKNTP Trigger: GGGGGTATTTTTCGTCAGCCAAGATGGGTTCCAAAA...CCCCATCCTCAAGACAGTATATTTACCTTGACTAATACAGAACTCTACCCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CCA 90 bp | CCCTGGCTAAATCAAGTAAGTAAAGTTCGTAAACACAGACAGAAGGCAGTTCACTCAAATTTCTCCTTTTaGAACCCATCTTGGCTGACG | + |
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Preference number: 4 (lower is better) Translates to: PWLNQVSKVRKHRQKAVHSNFSF*NPSWLT Trigger: CGTCAGCCAAGATGGGTTCCAAAAGGAGAAATTTGA...GTGAACTGCCTTCTGTCTGTGTTTACGAACTTTACTTACTTGATTTAGCCAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTGCATTAATAAATCCTTaGCGCCTTTGCTGCAACTGC | + |
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Preference number: 4 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGALINP*RLCCNC Trigger: GCAGTTGCAGCAAAGGCGGCAAGGATTTATTAATGC...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR TCA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTTTTTCTTCTGCCTTTTaGATGGCCTCTTCCATATCC | + |
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Preference number: 4 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGFSSAF*MASSIS Trigger: GGATATGGAAGAGGCCATTCAAAAGGCAGAAGAAAA...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | CTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTAACATGTTCACGTTGTTTGTCTaGAAGGAATTGTTGGCGACG | + |
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Preference number: 4 (lower is better) Translates to: LMPLNCKTKVMLTSSGNMFTLFV*KELLAT Trigger: CGTCGCCAACAATTCCTTGCAGACAAACAACGTGAA...CATGTTACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| 3UTR CAA 72 bp | GTAGAGTTCTGTATTAGTCAAGGTAAATATACTGTCTaGAGGATGGGGATGCAAACAGTGCTCTGTAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VEFCISQGKYTV*RMGMQTVLCSV Trigger: AACACTACAGAGCACTGTTTGCATCCCCATCCTCAAGACAGTATATTTACCTTGACTAATACAGAACTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR TCA 90 bp | AGACAGAAGGCAGTTCACTTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATTTCTCCTCATTTTCTTaGACTTTTGCCATCCGATCT | + |
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Preference number: 4 (lower is better) Translates to: RQKAVHFGVEFCISQGKYFSSFS*TFAIRS Trigger: AGATCGGATGGCAAAAGTTCAAGAAAATGAGGAGAA...ATATTTACCTTGACTAATACAGAACTCTACCCCAAAGTGAACTGCCTTCTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR TCA 90 bp | CTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTAACATGGTAAATATACTGTCTTaGGGATGGGGATGCAAACAG | + |
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Preference number: 4 (lower is better) Translates to: LMPLNCKTKVMLTSSGNMVNILS*GWGCKQ Trigger: CTGTTTGCATCCCCATCCTCAAGACAGTATATTTAC...CATGTTACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTTCTCTTGTTTTCTTCTaGCTTTTGAATGGCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGSLVFF*LLNGLF Trigger: GAAGAGGCCATTCAAAAGGCAGAAGAAAACAAGAGA...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | TTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATACTGTCTTGAGGATGGGGGTCAAGATAGTACTGTaGTTTCGCTTTGTTTCGTTT | + |
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Preference number: 4 (lower is better) Translates to: FGVEFCISQGKYTVLRMGVKIVL*FRFVSF Trigger: AAACGAAACAAAGCGAAAGCACAGTACTATCTTGAC...CCCCATCCTCAAGACAGTATATTTACCTTGACTAATACAGAACTCTACCCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | GGTAAATATACTGTCTTGAGGATGGGGATGCAAACAGTGCTCTGTAGTGTTGTAATTTTCTTGAACTTTTaGCATCCGATCTTCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GKYTVLRMGMQTVLCSVVIFLNF*HPIFFS Trigger: AGAGAAGAAGATCGGATGGCAAAAGTTCAAGAAAAT...TACAACACTACAGAGCACTGTTTGCATCCCCATCCTCAAGACAGTATATTTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTTCCAAATCTTCACGTTaGCGCAGCATTTCTTCTAAT | + |
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Preference number: 4 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGSKSSR*RSISSN Trigger: ATTAGAAGAAATGCTGCGGCAACGTGAAGATTTGGA...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CCA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTTCAGCTTGTTCTTCCTaGTATAATTCTTGTCGCACT | + |
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Preference number: 4 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGSACSS*YNSCRT Trigger: AGTGCGACAAGAATTATACCAGGAAGAACAAGCTGA...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR TCA 90 bp | ACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACAAGAAATTGCTTGCGCTaGACACGGTTATCATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TDNGYLMPLNCKTKVMLTRNCLR*TRLSFS Trigger: TGAAAATGATAACCGTGTTCAGCGCAAGCAATTTCT...TGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR TCA 90 bp | AGACAGAAGGCAGTTCACTTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATGTTTTTCTTCTTGTTTaGGCTGGAGTTCTTTCAATC | + |
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Preference number: 4 (lower is better) Translates to: RQKAVHFGVEFCISQGKYVFLLV*AGVLSI Trigger: GATTGAAAGAACTCCAGCTCAAACAAGAAGAAAAAC...ATATTTACCTTGACTAATACAGAACTCTACCCCAAAGTGAACTGCCTTCTGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR TCA 90 bp | CTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTAACATGAGAGCCTGCTCTTTCTaGAACTCTTCTATATACCTT | + |
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Preference number: 4 (lower is better) Translates to: LMPLNCKTKVMLTSSGNMRACSF*NSSIYL Trigger: AAGGTATATAGAAGAGTTTCAGAAAGAGCAGGCTCT...CATGTTACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | CTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTAACATGTCTTCTTCTCTTTGCTaGTGCATGTTAGCAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: LMPLNCKTKVMLTSSGNMSSSLC*CMLANS Trigger: AGAGTTTGCTAACATGCAGCAGCAAAGAGAAGAAGA...CATGTTACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CCA 90 bp | AATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTTCTGCAAGGAATTGTTaGCGACGCTCTTCAATAAGT | + |
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Preference number: 4 (lower is better) Translates to: NGYLMPLNCKTKVMLTSSSARNC*RRSSIS Trigger: ACTTATTGAAGAGCGTCGCCAACAATTCCTTGCAGA...ACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CCA 90 bp | AGACAGAAGGCAGTTCACTTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATAATCCAAACAGACAATaGATACCTAATGCCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: RQKAVHFGVEFCISQGKYNPNRQ*IPNATE Trigger: TTCAGTGGCATTAGGTATCCATTGTCTGTTTGGATT...ATATTTACCTTGACTAATACAGAACTCTACCCCAAAGTGAACTGCCTTCTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR TCA 90 bp | AATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGTTGATATACTTTCCTaGACTCTTCACCAAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: NGYLMPLNCKTKVMLTSSVDILS*TLHQAD Trigger: ATCTGCTTGGTGAAGAGTTCAGGAAAGTATATCAAC...ACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTTTCATGTTTCAGTTTTaGCAATTCCATAGCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGFMFQF*QFHSQF Trigger: AAACTGGCTATGGAATTGGCAAAACTGAAACATGAA...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR GCA 90 bp | AATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGTTTCGTTTGTCTTCTaGAGCATTCTCTTCCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: NGYLMPLNCKTKVMLTSSVSFVF*SILFLY Trigger: ATAAAGGAAGAGAATGCTGCAGAAGACAAACGAAAC...ACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS CCA 90 bp | CCTCCCGCCGCAAACGCAGCAGCCAGCAGCCCCAAGGAGCGCACCTaGCTGCGCGCGCTCGGGTGTTTACGCGGCGTCTTGGCAACGGTG | + |
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Preference number: 5 (lower is better) Translates to: PPAANAAASSPKERT*LRALGCLRGVLATV Trigger: CACCGTTGCCAAGACGCCGCGTAAACACCCGAGCGCGCGCAGCCAGGTGCGCTCCTTGGGGCTGCTGGCTGCTGCGTTTGCGGCGGGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS TCA 90 bp | GACAGGCCGGCTCCAGAAACCCAGGTCTTTACGATTACACCGAGCTaGGGCACAATCAGGCATCACTTACCTGCTGCTGTTGTTTATCTA | + |
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Preference number: 5 (lower is better) Translates to: DRPAPETQVFTITPS*GTIRHHLPAAVVYL Trigger: TAGATAAACAACAGCAGCAGGTAAGTGATGCCTGATTGTGCCTCAGCTCGGTGTAATCGTAAAGACCTGGGTTTCTGGAGCCGGCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558694.1 |
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| CDS-3UTR CAA 90 bp | CAAACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGTGTTTACGCGGCGTCTaGGCAACGGTGGAGCTGCGC | + |
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Preference number: 5 (lower is better) Translates to: QTDNGYLMPLNCKTKVMLCLRGV*ATVELR Trigger: GCGCAGCTCCACCGTTGCCAAGACGCCGCGTAAACA...CAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | TTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATACTGTCTTGAGGATGGGGAAATCCTTGCCGCCTTaGCTGCAACTGCCACTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FGVEFCISQGKYTVLRMGKSLPP*LQLPLF Trigger: GAAGAGTGGCAGTTGCAGCAAAGGCGGCAAGGATTT...CCCCATCCTCAAGACAGTATATTTACCTTGACTAATACAGAACTCTACCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | ACTGTCTTGAGGATGGGGATGCAAACAGTGCTCTGTAGTGTTGTAGAAATCGGAGGTAAATATACTGTCTaGAGGATGGGGATGCAAACA | + |
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Preference number: 5 (lower is better) Translates to: TVLRMGMQTVLCSVVEIGGKYTV*RMGMQT Trigger: TGTTTGCATCCCCATCCTCAAGACAGTATATTTACC...TCCGATTTCTACAACACTACAGAGCACTGTTTGCATCCCCATCCTCAAGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | TTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATACTGTCTTGAGGATGGGGTGCATTAATAAATCCTaGCCGCCTTTGCTGCAACTG | + |
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Preference number: 5 (lower is better) Translates to: FGVEFCISQGKYTVLRMGCINKS*PPLLQL Trigger: CAGTTGCAGCAAAGGCGGCAAGGATTTATTAATGCA...CCCCATCCTCAAGACAGTATATTTACCTTGACTAATACAGAACTCTACCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | ACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACACTTTTGGAACCCATCTaGGCTGACGAAAAATACCCC | + |
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Preference number: 5 (lower is better) Translates to: TDNGYLMPLNCKTKVMLTLLEPI*ADEKYP Trigger: GGGGTATTTTTCGTCAGCCAAGATGGGTTCCAAAAG...TGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | CCCTGGCTAAATCAAGTAAGTAAAGTTCGTAAACACAGACAGAAGGCAGTTCACGTTTTCTCTTACTTGTaGCCTCATCTTTTCGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: PWLNQVSKVRKHRQKAVHVFSYL*PHLFVL Trigger: AAGGACGAAAAGATGAGGCAACAAGTAAGAGAAAAC...GTGAACTGCCTTCTGTCTGTGTTTACGAACTTTACTTACTTGATTTAGCCAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTTCTCCTCTTCCTCTTTaGCAGCCTGTAGCACTAATT | + |
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Preference number: 5 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGSPLPL*QPVALI Trigger: AATTAGTGCTACAGGCTGCAAAAGAGGAAGAGGAGA...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | CAAACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGGTCTGCAAGGAATTGTaGGCGACGCTCTTCAATAAG | + |
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Preference number: 5 (lower is better) Translates to: QTDNGYLMPLNCKTKVMLVCKEL*ATLFNK Trigger: CTTATTGAAGAGCGTCGCCAACAATTCCTTGCAGAC...CAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | TTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATACTGTCTTGAGGATGGGGTCTAGTTCACGTTGTTaGTCTGCAAGGAATTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: FGVEFCISQGKYTVLRMGSSSRC*SARNCW Trigger: CCAACAATTCCTTGCAGACAAACAACGTGAACTAGA...CCCCATCCTCAAGACAGTATATTTACCTTGACTAATACAGAACTCTACCCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | CTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTAACATGCTCAAATTTCTCCTTTaGGAACCCATCTTGGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: LMPLNCKTKVMLTSSGNMLKFLL*EPILAD Trigger: GTCAGCCAAGATGGGTTCCAAAAGGAGAAATTTGAG...CATGTTACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | AGACAGAAGGCAGTTCACTTTGGGGTAGAGTTCTGTATTAGTCAAGGTAAATATTCTTCCATCATGGTTTaGGCTATTTCAGCATCACGT | + |
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Preference number: 5 (lower is better) Translates to: RQKAVHFGVEFCISQGKYSSIMV*AISASR Trigger: ACGTGATGCTGAAATAGCCAAAACCATGATGGAAGA...ATATTTACCTTGACTAATACAGAACTCTACCCCAAAGTGAACTGCCTTCTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | ACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACACCGATCTTCTTCTCTTaGCTGCTGCATGTTAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: TDNGYLMPLNCKTKVMLTPIFFS*LLHVSK Trigger: TTTGCTAACATGCAGCAGCAAAGAGAAGAAGATCGG...TGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | ACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATTTGTCTGCAAGGAATaGTTGGCGACGCTCTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: TDNGYLMPLNCKTKVMLTFVCKE*LATLFN Trigger: ATTGAAGAGCGTCGCCAACAATTCCTTGCAGACAAA...TGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | ACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACAGTTTTCTTCTGCCTTTaGAATGGCCTCTTCCATATC | + |
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Preference number: 5 (lower is better) Translates to: TDNGYLMPLNCKTKVMLTVFFCL*NGLFHI Trigger: GATATGGAAGAGGCCATTCAAAAGGCAGAAGAAAAC...TGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | CTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTAACATGTTCGCTTTGTTTCGTTaGTCTTCTGCAGCATTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LMPLNCKTKVMLTSSGNMFALFR*SSAAFS Trigger: AGAGAATGCTGCAGAAGACAAACGAAACAAAGCGAA...CATGTTACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | CAAACAGACAATGGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGTACTGTGCTTTCGCTTaGTTTCGTTTGTCTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QTDNGYLMPLNCKTKVMLYCAFA*FRLSSA Trigger: TGCAGAAGACAAACGAAACAAAGCGAAAGCACAGTA...CAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCCATTGTCTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS-3UTR CAA 90 bp | GGATACCTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTTTCATTCTGCACCATTaGATTCCTGATTTGACTGTT | + |
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Preference number: 5 (lower is better) Translates to: GYLMPLNCKTKVMLTSSGFILHH*IPDLTV Trigger: AACAGTCAAATCAGGAATCAAATGGTGCAGAATGAA...ACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAGGTATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS TCA 90 bp | TGGCCTCTTCCATATCCAACTCAAATTGTTCATTTTGTAATAATCTaGGAAATTGCTTGCGCTGAACACGGTTATCATTTTCATTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: WPLPYPTQIVHFVII*EIACAEHGYHFHSA Trigger: TGCAGAATGAAAATGATAACCGTGTTCAGCGCAAGCAATTTCTCAGATTATTACAAAATGAACAATTTGAGTTGGATATGGAAGAGGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000260453.4 ENST00000558694.1 |
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| CDS-3UTR CAA 90 bp | CTAATGCCACTGAACTGTAAAACAAAAGTTATGCTGACATCTAGTGGTAACATGTTCCTTCAAGGCCATTaGTTCTTCAAAATCTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LMPLNCKTKVMLTSSGNMFLQGH*FFKILL Trigger: AAGCAAGATTTTGAAGAACAAATGGCCTTGAAGGAA...CATGTTACCACTAGATGTCAGCATAACTTTTGTTTTACAGTTCAGTGGCATTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS CCA 72 bp | CCTGGCTGCGCGCGCTCGGGTGTTTACGCGGCGTCTTaGCAACGGTGGAGCTGCGCGCCCTCCGCTCGACCA | + |
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Preference number: 6 (lower is better) Translates to: PGCARSGVYAAS*QRWSCAPSARP Trigger: TGGTCGAGCGGAGGGCGCGCAGCTCCACCGTTGCCAAGACGCCGCGTAAACACCCGAGCGCGCGCAGCCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS CAA 72 bp | ACCTGGCTGCGCGCGCTCGGGTGTTTACGCGGCGTCTaGGCAACGGTGGAGCTGCGCGCCCTCCGCTCGACC | + |
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Preference number: 6 (lower is better) Translates to: TWLRALGCLRGV*ATVELRALRST Trigger: GGTCGAGCGGAGGGCGCGCAGCTCCACCGTTGCCAAGACGCCGCGTAAACACCCGAGCGCGCGCAGCCAGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS CCA 72 bp | GAACCCATCTTGGCTGACGAAAAATACCCCCTCTCGTaGGACCGCGGCCACCACCTCCCGCCGCAAACGCAG | + |
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Preference number: 6 (lower is better) Translates to: EPILADEKYPLS*DRGHHLPPQTQ Trigger: CTGCGTTTGCGGCGGGAGGTGGTGGCCGCGGTCCCACGAGAGGGGGTATTTTTCGTCAGCCAAGATGGGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000260453.4 ENST00000558694.1 |
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| CDS TCA 72 bp | GCTCCAGAAACCCAGGTCTTTACGATTACACCGAGCTaGGGCACAATCAGGCATCACTTACCTGCTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: APETQVFTITPS*GTIRHHLPAAV Trigger: AACAGCAGCAGGTAAGTGATGCCTGATTGTGCCTCAGCTCGGTGTAATCGTAAAGACCTGGGTTTCTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558694.1 |
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| CDS CAA 72 bp | GCTGAGGCACAATCAGGCATCACTTACCTGCTGCTGTaGTTTATCTACTCATTTCCAGCATTAACAGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: AEAQSGITYLLL*FIYSFPALTAD Trigger: GTCAGCTGTTAATGCTGGAAATGAGTAGATAAACAACAGCAGCAGGTAAGTGATGCCTGATTGTGCCTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558694.1 |
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| CDS CAA 90 bp | TTACACCGAGCTGAGGCACAATCAGGCATCACTTACCTGCTGCTGTaGTTTATCTACTCATTTCCAGCATTAACAGCTGACTTTCATCGT | + |
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Preference number: 6 (lower is better) Translates to: LHRAEAQSGITYLLL*FIYSFPALTADFHR Trigger: ACGATGAAAGTCAGCTGTTAATGCTGGAAATGAGTAGATAAACAACAGCAGCAGGTAAGTGATGCCTGATTGTGCCTCAGCTCGGTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558694.1 |
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| CDS GCA 72 bp | ATTGCATTAATAAATCCTTGCCGCCTTTGCTGCAACTaGCACTCTTCTAGTTCACGTTGTTTGTCTGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: IALINPCRLCCN*HSSSSRCLSAR Trigger: CCTTGCAGACAAACAACGTGAACTAGAAGAGTGGCAGTTGCAGCAAAGGCGGCAAGGATTTATTAATGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260453.4 ENST00000566386.1 |
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| CDS CCA 72 bp | TCTTCTAGTTCACGTTGTTTGTCTGCAAGGAATTGTTaGCGACGCTCTTCAATAAGTTTTTCCACAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSSSRCLSARNC*RRSSISFSTAL Trigger: GAGGGCTGTGGAAAAACTTATTGAAGAGCGTCGCCAACAATTCCTTGCAGACAAACAACGTGAACTAGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000260453.4 ENST00000566386.1 |
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| CDS TCA 72 bp | GCCCTCCTGTGTTCCAGCTGCTTCATTCTTTGTTTCTaGGCATTCATTAATTCTATTCGATCATCCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ALLCSSCFILCF*AFINSIRSSSA Trigger: TGCTGAGGATGATCGAATAGAATTAATGAATGCTCAGAAACAAAGAATGAAGCAGCTGGAACACAGGAGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS TCA 72 bp | CTTCACAAATTTCACTCCTTTGTTGATATACTTTCCTaGACTCTTCACCAAGCAGATCAATATCATCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LHKFHSFVDILS*TLHQADQYHPL Trigger: AAGAGGATGATATTGATCTGCTTGGTGAAGAGTTCAGGAAAGTATATCAACAAAGGAGTGAAATTTGTGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260453.4 ENST00000566386.1 |
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| CDS CCA 72 bp | TTTAGCTTGCTCTTATATATTTCAGCTTGTTCTTCCTaGTATAATTCTTGTCGCACTTGTTCCAAATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FSLLLYISACSS*YNSCRTCSKSS Trigger: TGAAGATTTGGAACAAGTGCGACAAGAATTATACCAGGAAGAACAAGCTGAAATATATAAGAGCAAGCTAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260453.4 |
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| CDS CAA 72 bp | ATGATATCATTTCTCTTCACAAATTTCACTCCTTTGTaGATATACTTTCCTGAACTCTTCACCAAGCAGATC | + |
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Preference number: 6 (lower is better) Translates to: MISFLFTNFTPL*IYFPELFTKQI Trigger: GATCTGCTTGGTGAAGAGTTCAGGAAAGTATATCAACAAAGGAGTGAAATTTGTGAAGAGAAATGATATCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260453.4 ENST00000566386.1 |
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| CDS CAA 72 bp | TTGATGATATCATTTCTCTTCACAAATTTCACTCCTTaGTTGATATACTTTCCTGAACTCTTCACCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LMISFLFTNFTP*LIYFPELFTKQ Trigger: CTGCTTGGTGAAGAGTTCAGGAAAGTATATCAACAAAGGAGTGAAATTTGTGAAGAGAAATGATATCATCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000260453.4 ENST00000566386.1 |
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