Pregenerated sensors for MND1 (Homo sapiens)
Ensembl gene IDs: ENSG00000121211Ensembl transcript IDs: ENST00000240488.8, ENST00000508731.5, ENST00000509752.5
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTGGTTCGCTCTTCCGTTTCACATCGGCCAATTTTAGCTTTCTCAATGCTTTTCCAGACAACTCCATCTTaGACTTCATGTGGGGGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LVRSSVSHRPILAFSMLFQTTPS*TSCGGG Trigger: CCCACCCCCACATGAAGTGCAAGATGGAGTTGTCTG...GAAAAGCATTGAGAAAGCTAAAATTGGCCGATGTGAAACGGAAGAGCGAACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTTCGCTCTTCCGTTTCACATCGGCCAATTTTAGCTTTCTCAATGCTTTTCATCTTGCACTTCATGTaGGGGTGGGGGAAAGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: LVRSSVSHRPILAFSMLFILHFM*GWGKVT Trigger: GGTGACTTTCCCCCACCCCCACATGAAGTGCAAGAT...GAAAAGCATTGAGAAAGCTAAAATTGGCCGATGTGAAACGGAAGAGCGAACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTCCATCTGTTAGCAGCTTCTTTGGCTACTTTATTTGCTTGGCGTATTTCTTCGCTCTTTTGCTAGCCTaGTTCGCTCTTCCGTTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SPSVSSFFGYFICLAYFFALLLA*FALPFH Trigger: GTGAAACGGAAGAGCGAACCAGGCTAGCAAAAGAGC...GAAGAAATACGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| 3UTR-3UTR GCA 90 bp | AAAATCATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACATATGGTTATCATCCTaGTTTTGTTCTACCAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KIICKSAWTEMDGFLLSYIWLSS*FCSTKR Trigger: CCTTTTGGTAGAACAAAAGCAGGATGATAACCATAT...GTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAATGATTTT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCATCTGTTAGCAGCTTCTTTGGCTACTTTATTTGCTTGGCGTATTTCTTCTCAGACAACTCCATCTaGCACTTCATGTGGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SPSVSSFFGYFICLAYFFSDNSI*HFMWGW Trigger: CCACCCCCACATGAAGTGCAAGATGGAGTTGTCTGA...GAAGAAATACGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTCCATCTGTTAGCAGCTTCTTTGGCTACTTTATTTGCTTGGCGTATTTCTTCTGCGGATCACAGTCTTaGTATTTTTCTACTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SPSVSSFFGYFICLAYFFCGSQS*YFSTSA Trigger: GGCAGAAGTAGAAAAATACAAAGACTGTGATCCGCA...GAAGAAATACGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATTACATATTCACAAGCTaGTACATCCTTCACCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: ICKSAWTEMDGFLLSYFDYIFTS*YILHHH Trigger: ATGGTGGTGAAGGATGTACAAGCTTGTGAATATGTA...ATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTTGGTCTCGAAGTGAAGAAAGCTCTTTTGCTAGCCTGGTTCGCTCTTCCAGTCACCTCGTGATCTaGCCGCCTCAGCCTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLWSRSEESSFASLVRSSSHLVI*PPQPPK Trigger: TTTGGGAGGCTGAGGCGGGCAGATCACGAGGTGACT...GGAAGAGCGAACCAGGCTAGCAAAAGAGCTTTCTTCACTTCGAGACCAAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR GCA 90 bp | TCCCTTTGGTCTCGAAGTGAAGAAAGCTCTTTTGCTAGCCTGGTTCGCTCTTCCCAGACAACTCCATCTTaGACTTCATGTGGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLWSRSEESSFASLVRSSQTTPS*TSCGGG Trigger: CCCACCCCCACATGAAGTGCAAGATGGAGTTGTCTG...GGAAGAGCGAACCAGGCTAGCAAAAGAGCTTTCTTCACTTCGAGACCAAAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| 3UTR CAA 72 bp | GCTGTTCCCTTTGGTCTCGAAGTGAAGAAAGCTCTTTaGCTAGCCTGGTTCGCTCTTCCGTTTCACATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVPFGLEVKKAL*LAWFALPFHIG Trigger: GCCGATGTGAAACGGAAGAGCGAACCAGGCTAGCAAAAGAGCTTTCTTCACTTCGAGACCAAAGGGAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR TCA 90 bp | CTGGTTCGCTCTTCCGTTTCACATCGGCCAATTTTAGCTTTCTCAATGCTTTTCCAGCAGCCAGGGTCCTaGGATTCCAGAACCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVRSSVSHRPILAFSMLFQQPGS*DSRTSN Trigger: GTTGGAGGTTCTGGAATCTCAGGACCCTGGCTGCTG...GAAAAGCATTGAGAAAGCTAAAATTGGCCGATGTGAAACGGAAGAGCGAACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CCA 90 bp | GTCCATCTGTTAGCAGCTTCTTTGGCTACTTTATTTGCTTGGCGTATTTCTTCCGCTCTTTTGCTAGCCTaGTTCGCTCTTCCGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VHLLAASLATLFAWRISSALLLA*FALPFH Trigger: GTGAAACGGAAGAGCGAACCAGGCTAGCAAAAGAGC...GGAAGAAATACGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CCA 90 bp | TTATCAGTCCATCTGTTAGCAGCTTCTTTGGCTACTTTATTTGCTTGGCGTATTATCTTGCACTTCATGTaGGGGTGGGGGAAAGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSVHLLAASLATLFAWRIILHFM*GWGKVT Trigger: GGTGACTTTCCCCCACCCCCACATGAAGTGCAAGAT...AATACGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGACTGATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR TCA 90 bp | TTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATGCTTCCCTCAGACAACTaGGATTCCAGAACCTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FVNLPGLRWMDFYCPTLMLPSDN*DSRTSN Trigger: GTTGGAGGTTCTGGAATCTCAGTTGTCTGAGGGAAG...CATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR GCA 90 bp | TCTCGAAGTGAAGAAAGCTCTTTTGCTAGCCTGGTTCGCTCTTCCGTTTCACATCAACTTATGTTTCCTTaGATGAAGAGCTTTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRSEESSFASLVRSSVSHQLMFP*MKSFTW Trigger: CCAAGTAAAGCTCTTCATGCAAGGAAACATAAGTTG...ATGTGAAACGGAAGAGCGAACCAGGCTAGCAAAAGAGCTTTCTTCACTTCGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CCA 90 bp | ATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATGCTCTTTTGCTAGCCTaGTTCGCTCTTCCGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICKSAWTEMDGFLLSYFDALLLA*FALPFH Trigger: GTGAAACGGAAGAGCGAACCAGGCTAGCAAAAGAGC...ATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR TCA 90 bp | GTCCATCTGTTAGCAGCTTCTTTGGCTACTTTATTTGCTTGGCGTATTTCTTCCAAGGACTTCTTTTACTaGCATAGCAGTAATGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHLLAASLATLFAWRISSKDFFY*HSSNAF Trigger: AAAGGCATTACTGCTATGTCAGTAAAAGAAGTCCTT...GGAAGAAATACGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CCA 90 bp | TTATCAGTCCATCTGTTAGCAGCTTCTTTGGCTACTTTATTTGCTTGGCGTATTACTTTAATTATTTCATaGAAGCAGCAGCCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSVHLLAASLATLFAWRITLIIS*KQQPGS Trigger: GGACCCTGGCTGCTGCTTCCATGAAATAATTAAAGT...AATACGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGACTGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CCA 90 bp | GTCCATCTGTTAGCAGCTTCTTTGGCTACTTTATTTGCTTGGCGTATTTCTTCCGTAGTCAAAGTCTTCTaGAATTCCAAAAGTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: VHLLAASLATLFAWRISSVVKVF*NSKSSI Trigger: GATAGAACTTTTGGAATTCCAGAAGACTTTGACTAC...GGAAGAAATACGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR GCA 90 bp | TTATCAGTCCATCTGTTAGCAGCTTCTTTGGCTACTTTATTTGCTTGGCGTATTATTTCTTCCACAACTTaGGGATCACAGTCTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LSVHLLAASLATLFAWRIISSTT*GSQSLY Trigger: ATACAAAGACTGTGATCCGCAAGTTGTGGAAGAAAT...AATACGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGACTGATAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CCA 90 bp | AAAATCATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTACTTTGATGAGCACTaGGGGGATATGGTTATCATC | + |
|
Preference number: 4 (lower is better) Translates to: KIICKSAWTEMDGFLLSYYFDEH*GDMVII Trigger: GATGATAACCATATCCCCCCAGTGCTCATCAAAGTA...GTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAATGATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR CCA 90 bp | AAATCATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTCTGCCTGGACTGAGATaGATGGATTTTTATTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSFVNLPGLRWMDFYCPTLPGLR*MDFYCP Trigger: AGGACAATAAAAATCCATCCATCTCAGTCCAGGCAG...AGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAATGATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATGCAACTTATGTTTCCTTaGATGAAGAGCTTTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FVNLPGLRWMDFYCPTLMQLMFP*MKSFTW Trigger: CCAAGTAAAGCTCTTCATGCAAGGAAACATAAGTTG...CATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATGATTTGTAAATCTGCCTaGACTGAGATGGATGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FVNLPGLRWMDFYCPTLMICKSA*TEMDGF Trigger: AAATCCATCCATCTCAGTCCAGGCAGATTTACAAAT...CATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACAAGGACTTCTTTTACTaGCATAGCAGTAATGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KIICKSAWTEMDGFLLSYKDFFY*HSSNAF Trigger: AAAGGCATTACTGCTATGTCAGTAAAAGAAGTCCTT...GTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAATGATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR GCA 90 bp | AAATCATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTATTTCTTCCACAACTTaGGGATCACAGTCTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KSFVNLPGLRWMDFYCPTISSTT*GSQSLY Trigger: ATACAAAGACTGTGATCCGCAAGTTGTGGAAGAAAT...AGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAATGATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATGCATCCTTCACCACCATaGAATATTTTAGTCTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FVNLPGLRWMDFYCPTLMHPSPP*NILVYV Trigger: TACATAGACTAAAATATTCCATGGTGGTGAAGGATG...CATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATATATGGTTATCATCCTaGTTTTGTTCTACCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ICKSAWTEMDGFLLSYFDIWLSS*FCSTKR Trigger: CCTTTTGGTAGAACAAAAGCAGGATGATAACCATAT...ATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR CCA 90 bp | ATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATGTAGTCAAAGTCTTCTaGAATTCCAAAAGTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: ICKSAWTEMDGFLLSYFDVVKVF*NSKSSI Trigger: GATAGAACTTTTGGAATTCCAGAAGACTTTGACTAC...ATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTTGGTCTCGAAGTGAAGAAAGCTCTTTTGCTAGCCTGGTTCGCTCTTCCGGCTACTTTATTTGCTaGGCGTATTTCTTCCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLWSRSEESSFASLVRSSGYFIC*AYFFHN Trigger: GTTGTGGAAGAAATACGCCAAGCAAATAAAGTAGCC...GGAAGAGCGAACCAGGCTAGCAAAAGAGCTTTCTTCACTTCGAGACCAAAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CAA 90 bp | TCTCGAAGTGAAGAAAGCTCTTTTGCTAGCCTGGTTCGCTCTTCCGTTTCACATTGCGGATCACAGTCTTaGTATTTTTCTACTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRSEESSFASLVRSSVSHCGSQS*YFSTSA Trigger: GGCAGAAGTAGAAAAATACAAAGACTGTGATCCGCA...ATGTGAAACGGAAGAGCGAACCAGGCTAGCAAAAGAGCTTTCTTCACTTCGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CAA 90 bp | TTATCAGTCCATCTGTTAGCAGCTTCTTTGGCTACTTTATTTGCTTGGCGTATTTCAGACAACTCCATCTaGCACTTCATGTGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSVHLLAASLATLFAWRISDNSI*HFMWGW Trigger: CCACCCCCACATGAAGTGCAAGATGGAGTTGTCTGA...AATACGCCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAGATGGACTGATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CAA 90 bp | TCTCGAAGTGAAGAAAGCTCTTTTGCTAGCCTGGTTCGCTCTTCCGTTTCACATCTTTGGCTACTTTATTaGCTTGGCGTATTTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SRSEESSFASLVRSSVSHLWLLY*LGVFLP Trigger: TGGAAGAAATACGCCAAGCAAATAAAGTAGCCAAAG...ATGTGAAACGGAAGAGCGAACCAGGCTAGCAAAAGAGCTTTCTTCACTTCGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTTCGCTCTTCCGTTTCACATCGGCCAATTTTAGCTTTCTCAATGCTTTTCCTGTTAGCAGCTTCTTaGGCTACTTTATTTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVRSSVSHRPILAFSMLFLLAAS*ATLFAW Trigger: CCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAG...GAAAAGCATTGAGAAAGCTAAAATTGGCCGATGTGAAACGGAAGAGCGAACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTTCGCTCTTCCGTTTCACATCGGCCAATTTTAGCTTTCTCAATGCTTTTCCCAACTTATGTTTCCTaGCATGAAGAGCTTTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVRSSVSHRPILAFSMLFPTYVS*HEELYL Trigger: CAAGTAAAGCTCTTCATGCAAGGAAACATAAGTTGG...GAAAAGCATTGAGAAAGCTAAAATTGGCCGATGTGAAACGGAAGAGCGAACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000509752.5 |
||
| CDS-3UTR CAA 90 bp | TTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATGTGCGGATCACAGTCTTaGTATTTTTCTACTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FVNLPGLRWMDFYCPTLMCGSQS*YFSTSA Trigger: GGCAGAAGTAGAAAAATACAAAGACTGTGATCCGCA...CATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR CAA 90 bp | ATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATGGCTACTTTATTTGCTaGGCGTATTTCTTCCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: ICKSAWTEMDGFLLSYFDGYFIC*AYFFHN Trigger: GTTGTGGAAGAAATACGCCAAGCAAATAAAGTAGCC...ATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTTGATGCTTTGGCTACTTTATTaGCTTGGCGTATTTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FVNLPGLRWMDFYCPTLMLWLLY*LGVFLP Trigger: TGGAAGAAATACGCCAAGCAAATAAAGTAGCCAAAG...CATCAAAGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR CAA 90 bp | AAATCATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTCTGTTAGCAGCTTCTTaGGCTACTTTATTTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSFVNLPGLRWMDFYCPTLLAAS*ATLFAW Trigger: CCAAGCAAATAAAGTAGCCAAAGAAGCTGCTAACAG...AGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAATGATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACCCAACTTATGTTTCCTaGCATGAAGAGCTTTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KIICKSAWTEMDGFLLSYPTYVS*HEELYL Trigger: CAAGTAAAGCTCTTCATGCAAGGAAACATAAGTTGG...GTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAATGATTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS-3UTR CAA 90 bp | AAATCATTTGTAAATCTGCCTGGACTGAGATGGATGGATTTTTATTGTCCTACTTATTTCTTCCACAACTaGCGGATCACAGTCTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KSFVNLPGLRWMDFYCPTYFFHN*RITVFV Trigger: TACAAAGACTGTGATCCGCAAGTTGTGGAAGAAATA...AGTAGGACAATAAAAATCCATCCATCTCAGTCCAGGCAGATTTACAAATGATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000240488.8 |
||
| CDS GCA 72 bp | ACAACCAGCAGCACCCGGCACAAGAGCAGCGACTCCTaGCCTTTGGCAGAAACCGGGGCGTTTTCACAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TTSSTRHKSSDS*PLAETGAFSQK Trigger: TTTCTGTGAAAACGCCCCGGTTTCTGCCAAAGGGCAGGAGTCGCTGCTCTTGTGCCGGGTGCTGCTGGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508731.5 |
||