RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMS22L (Homo sapiens)

Ensembl gene IDs: ENSG00000146263

Ensembl transcript IDs: ENST00000275053.8, ENST00000369251.6, ENST00000482634.1, ENST00000496119.2, ENST00000506256.5, ENST00000508820.1, ENST00000508976.5, ENST00000509383.5, ENST00000510018.5, ENST00000511335.5, ENST00000514790.1, ENST00000683635.1

Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGACCATGAAGGTGCTCTCAAGATACAGTGGTCATTTTTGGTCTaGGGACTGGTTCCAGGATCCCCTGTGCATACCATAATCTGCACT +
Preference number: 1 (lower is better)
Translates to: EDHEGALKIQWSFLV*GLVPGSPVHTIICT
Trigger: AGTGCAGATTATGGTATGCACAGGGGATCCTGGAACCAGTCCCCAGACCAAAAATGACCACTGTATCTTGAGAGCACCTTCATGGTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR TCA 90 bp AGAGAGAGAAAAGCTGGAGTTATCAGTTCACCACTAACAGAATGTTaGGACAAAGCAGATGAAGGGTCGTATCTTACGACTGGGGACAGG +
Preference number: 1 (lower is better)
Translates to: RERKAGVISSPLTEC*DKADEGSYLTTGDR
Trigger: CCTGTCCCCAGTCGTAAGATACGACCCTTCATCTGCTTTGTCTCAACATTCTGTTAGTGGTGAACTGATAACTCCAGCTTTTCTCTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR TCA 90 bp TCCCTACCTAGTATTCTCTTCCCTGAGAGGTCTCAACAAATAATCTaGGCAAGTGGTAGATGGTGGTGTACTGCACAAAGAAGGCTAAGA +
Preference number: 1 (lower is better)
Translates to: SLPSILFPERSQQII*ASGRWWCTAQRRLR
Trigger: TCTTAGCCTTCTTTGTGCAGTACACCACCATCTACCACTTGCTCAGATTATTTGTTGAGACCTCTCAGGGAAGAGAATACTAGGTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR CCA 90 bp TCAAGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTaGTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATT +
Preference number: 1 (lower is better)
Translates to: SSPAVNPEEPASTKS*SSIYSDFASHKYCI
Trigger: AATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR TCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGGAGGCGGGCGGATCATaGGGTCAGGAGATCGAGCCC +
Preference number: 2 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLEAGGS*GQEIEP
Trigger: GGGCTCGATCTCCTGACCTCATGATCCGCCCGCCTC...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR CCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAAGTTTGAGACCCAGGTaGGTTCCCAAAACTAGGACT +
Preference number: 2 (lower is better)
Translates to: SYLTTGDRKEDHEGALKISLRPR*VPKTRT
Trigger: AGTCCTAGTTTTGGGAACCCACCTGGGTCTCAAACT...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR TCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAAGAAGATGGATCAGCTaGCTTCTCAGACCACTACTA +
Preference number: 2 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIRRWIS*LLRPLL
Trigger: TAGTAGTGGTCTGAGAAGTCAGCTGATCCATCTTCT...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR GCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATAAAACTCCTTAGTGACTaGTGGAACTTTCCAAGCCAT +
Preference number: 2 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIKLLSD*WNFPSH
Trigger: ATGGCTTGGAAAGTTCCAGCAGTCACTAAGGAGTTT...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR TCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGAAGCAGGAGGTAGTCTaGGATTTCAGGAGACTCCAA +
Preference number: 2 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLKQEVV*DFRRLQ
Trigger: TTGGAGTCTCCTGAAATCTCAGACTACCTCCTGCTT...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR TCA 90 bp TTAGCAAGGCCTTTAAAAGGAAGCCAAGAAATACTGAAGGAACTATTCAGGTTCCCTTGTCGTACCTGTTaGGTGACAGGCTTATTAAAT +
Preference number: 2 (lower is better)
Translates to: LARPLKGSQEILKELFRFPCRTC*VTGLLN
Trigger: ATTTAATAAGCCTGTCACTCAACAGGTACGACAAGG...GAACCTGAATAGTTCCTTCAGTATTTCTTGGCTTCCTTTTAAAGGCCTTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR CCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATGTACAGTCAGATAGGTaGCAGAAAGTCTCCAGACTG +
Preference number: 2 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYVQSDR*QKVSRL
Trigger: CAGTCTGGAGACTTTCTGCCACCTATCTGACTGTAC...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR TCA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGCCACCTTGGGGCTGCTaGATAGACTTGTATAGTAAA +
Preference number: 2 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKPPWGC*IDLYSK
Trigger: TTTACTATACAAGTCTATTCAGCAGCCCCAAGGTGG...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR CCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATGCTCTCAAGATACAGTaGTCATTTTTGGTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYALKIQ*SFLVWG
Trigger: TCCCCAGACCAAAAATGACCACTGTATCTTGAGAGC...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR TCA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACACGTACATTATCCCATTaGTTCTCACAACAACACTGT +
Preference number: 2 (lower is better)
Translates to: VLHILRFCIPQILYFRSTRTLSH*FSQQHC
Trigger: ACAGTGTTGTTGTGAGAATCAATGGGATAATGTACG...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR TCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATGAGAAAGCTGCTAAATaGGCCTCTTGTTTGGAAAGA +
Preference number: 2 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYEKAAK*ASCLER
Trigger: TCTTTCCAAACAAGAGGCTCATTTAGCAGCTTTCTC...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR TCA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATAGAGGATTCTTTCACTaGAGATCTTTGAAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHRGFFH*RSLKAG
Trigger: TCCTGCTTTCAAAGATCTTCAGTGAAAGAATCCTCT...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR GCA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATCATGACAGAAGATACTaGATATACCTTCCTTTGACT +
Preference number: 2 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHHDRRY*IYLPLT
Trigger: AGTCAAAGGAAGGTATATGCAGTATCTTCTGTCATG...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR CCA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACAAGTTATAAGAAGCTCTaGCTAAAGAGCAAGAAGATG +
Preference number: 2 (lower is better)
Translates to: VLHILRFCIPQILYFRSTSYKKL*LKSKKM
Trigger: CATCTTCTTGCTCTTTAGCCAGAGCTTCTTATAACT...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR CCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGGATGTAAGAAAACATTaGAAAGTGGGATCATTCATC +
Preference number: 2 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLDVRKH*KVGSFI
Trigger: GATGAATGATCCCACTTTCCAATGTTTTCTTACATC...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR CCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATAGATCCACATATAAGTaGACCTGCACAGTTCAAACT +
Preference number: 2 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYRSTYK*TCTVQT
Trigger: AGTTTGAACTGTGCAGGTCCACTTATATGTGGATCT...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR CCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATACAATGGTAAGTTACTaGAAGTCCTCGAGCAGAAAA +
Preference number: 2 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYTMVSY*KSSSRK
Trigger: TTTTCTGCTCGAGGACTTCCAGTAACTTACCATTGT...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR CCA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATAACAATTGCAATGTTTaGCTCCCAGAAATCACAAAG +
Preference number: 2 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHNNCNV*LPEITK
Trigger: CTTTGTGATTTCTGGGAGCCAAACATTGCAATTGTT...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR TCA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGGTTCTTCAAATAGGCTaGTGTTGGTTAAATTGTCAC +
Preference number: 2 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKVLQIG*CWLNCH
Trigger: GTGACAATTTAACCAACATCAGCCTATTTGAAGAAC...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR TCA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGTCTTCTTCGGTCACTTaGTTTTTCAAGCAGTGTTTT +
Preference number: 2 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKSSSVT*FFKQCF
Trigger: AAAACACTGCTTGAAAAATCAAGTGACCGAAGAAGA...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR CCA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGTTTTCTCATTTCATCTaGTACTCCATGGCGATCAAA +
Preference number: 2 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKFSHFI*YSMAIK
Trigger: TTTGATCGCCATGGAGTACCAGATGAAATGAGAAAA...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR CCA 72 bp GAAGGTGCTCTCAAGATACAGTGGTCATTTTTGGTCTaGGGACTGGTTCCAGGATCCCCTGTGCATACCATA +
Preference number: 3 (lower is better)
Translates to: EGALKIQWSFLV*GLVPGSPVHTI
Trigger: TATGGTATGCACAGGGGATCCTGGAACCAGTCCCCAGACCAAAAATGACCACTGTATCTTGAGAGCACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR TCA 72 bp GTCGTATCTTACGACTGGGGACAGGAAAGAAGACCATaGAGGTGCTCTCAAGATACAGTGGTCATTTTTGGT +
Preference number: 3 (lower is better)
Translates to: VVSYDWGQERRP*RCSQDTVVIFG
Trigger: ACCAAAAATGACCACTGTATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR CCA 72 bp GCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTaGTCCTCCATATACTCAGATTTTGCATCCCACAAA +
Preference number: 3 (lower is better)
Translates to: AVNPEEPASTKS*SSIYSDFASHK
Trigger: TTTGTGGGATGCAAAATCTGAGTATATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR TCA 72 bp ATCTGTTGGTTTAAGACAAACCCACCTTGGGGCTGCTaGATAGACTTGTATAGTAAAGGTACCTTCCAACCA +
Preference number: 3 (lower is better)
Translates to: ICWFKTNPPWGC*IDLYSKGTFQP
Trigger: TGGTTGGAAGGTACCTTTACTATACAAGTCTATTCAGCAGCCCCAAGGTGGGTTTGTCTTAAACCAACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR TCA 72 bp ACACTCATGACAGAAGATACTGCATATACCTTCCTTTaGCTTGTTTCCAAGGATGAGGGCCATTGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: TLMTEDTAYTFL*LVSKDEGHCSS
Trigger: TGAAGAGCAATGGCCCTCATCCTTGGAAACAAGTCAAAGGAAGGTATATGCAGTATCTTCTGTCATGAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR CCA 72 bp ATAATCCACCAACTAAAACCTAATGGATCCCTGGACTaGATTACAGGCATAGAGGATCTTCTTCGGTCACTT +
Preference number: 3 (lower is better)
Translates to: IIHQLKPNGSLD*ITGIEDLLRSL
Trigger: AAGTGACCGAAGAAGATCCTCTATGCCTGTAATCCAGTCCAGGGATCCATTAGGTTTTAGTTGGTGGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR TCA 72 bp AAAGCTGGAGTTATCAGTTCACCACTAACAGAATGTTaGGACAAAGCAGATGAAGGGTCGTATCTTACGACT +
Preference number: 3 (lower is better)
Translates to: KAGVISSPLTEC*DKADEGSYLTT
Trigger: AGTCGTAAGATACGACCCTTCATCTGCTTTGTCTCAACATTCTGTTAGTGGTGAACTGATAACTCCAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR CAA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACACTGCACAGTTCAAACTaGTGTTGCTCAAGGGTCAAC +
Preference number: 3 (lower is better)
Translates to: VLHILRFCIPQILYFRSTLHSSN*CCSRVN
Trigger: GTTGACCCTTGAGCAACACAAGTTTGAACTGTGCAG...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR CAA 90 bp TTAGCAAGGCCTTTAAAAGGAAGCCAAGAAATACTGAAGGAACTATTCAGGTTCACCTTGTCGTACCTGTaGAGTGACAGGCTTATTAAA +
Preference number: 3 (lower is better)
Translates to: LARPLKGSQEILKELFRFTLSYL*SDRLIK
Trigger: TTTAATAAGCCTGTCACTCAACAGGTACGACAAGGT...GAACCTGAATAGTTCCTTCAGTATTTCTTGGCTTCCTTTTAAAGGCCTTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR CAA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGTCAGAAGACCTAACCTaGTCGTACCTGTTGAGTGAC +
Preference number: 3 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKSEDLT*SYLLSD
Trigger: GTCACTCAACAGGTACGACAAGGTTAGGTCTTCTGA...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR CAA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACACCAAAAGACAATGGCTaGTATTACACTGGTAGAAGC +
Preference number: 3 (lower is better)
Translates to: VLHILRFCIPQILYFRSTPKDNG*YYTGRS
Trigger: GCTTCTACCAGTGTAATACAAGCCATTGTCTTTTGG...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR CAA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACAACGTACATTATCCCATaGATTCTCACAACAACACTG +
Preference number: 3 (lower is better)
Translates to: VLHILRFCIPQILYFRSTTYIIP*ILTTTL
Trigger: CAGTGTTGTTGTGAGAATCAATGGGATAATGTACGT...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR CAA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAAGGGAAAACCTCTGTCTaGTTCATTAGAGGATTCTTT +
Preference number: 3 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQGKTSV*FIRGFF
Trigger: AAAGAATCCTCTAATGAACAAGACAGAGGTTTTCCC...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR TCA 72 bp TTGGGCCACCAAATATTTTCACGTACATTATCCCATTaGTTCTCACAACAACACTGTCAAATAGTAAAGGGA +
Preference number: 3 (lower is better)
Translates to: LGHQIFSRTLSH*FSQQHCQIVKG
Trigger: TCCCTTTACTATTTGACAGTGTTGTTGTGAGAATCAATGGGATAATGTACGTGAAAATATTTGGTGGCCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR TCA 72 bp TTCATCTGGTACTCCATGGCGATCAAACTTGTAAAATaGTGCTACATGAGTAATAATCCACCAACTAAAACC +
Preference number: 3 (lower is better)
Translates to: FIWYSMAIKLVK*CYMSNNPPTKT
Trigger: GGTTTTAGTTGGTGGATTATTACTCATGTAGCATCATTTTACAAGTTTGATCGCCATGGAGTACCAGATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR TCA 72 bp ACCGCTGGGCTCAAAGAACACAAAAGTTTTATATGTTaGAACTATTACCTACCAACGTACAACTTGAAGATG +
Preference number: 3 (lower is better)
Translates to: TAGLKEHKSFIC*NYYLPTYNLKM
Trigger: CATCTTCAAGTTGTACGTTGGTAGGTAATAGTTTCAACATATAAAACTTTTGTGTTCTTTGAGCCCAGCGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR CAA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACAGATCCTATTACACAGTaGCTAATTAACCTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: VLHILRFCIPQILYFRSTDPITQ*LINLQF
Trigger: GAACTGAAGGTTAATTAGCAACTGTGTAATAGGATC...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR-3UTR CAA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAACTGATGTTGGTTAAATaGTCACTTGCCAGATTCATA +
Preference number: 3 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQLMLVK*SLARFI
Trigger: TATGAATCTGGCAAGTGACAATTTAACCAACATCAG...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR CAA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGTCAAATAGGCTGATGTaGGTTAAATTGTCACTTGCC +
Preference number: 3 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKSNRLM*VKLSLA
Trigger: GGCAAGTGACAATTTAACCAACATCAGCCTATTTGA...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR CAA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATCTACCAACGTACAACTaGAAGATGTTTGTTTCTATC +
Preference number: 3 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHLPTYN*KMFVSI
Trigger: GATAGAAACAAACATCTTCAAGTTGTACGTTGGTAG...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR-3UTR CAA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGATCTTCTTCGGTCACTaGATTTTTCAAGCAGTGTTT +
Preference number: 3 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKIFFGH*IFQAVF
Trigger: AAACACTGCTTGAAAAATCAAGTGACCGAAGAAGAT...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR TCA 72 bp TTTGGCTCCCAGAAATCACAAAGTGTCAAACAACAGTaGAGATACATTCGTAATTGTTCTTCTAGAATGACA +
Preference number: 3 (lower is better)
Translates to: FGSQKSQSVKQQ*RYIRNCSSRMT
Trigger: TGTCATTCTAGAAGAACAATTACGAATGTATCTTCACTGTTGTTTGACACTTTGTGATTTCTGGGAGCCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
3UTR CCA 72 bp ATTTGGCAACTCTTGGAACCTAAATATAAACCCTGTTaGCATGTTTACACTTCTTTTTGGATATCAGCTGTA +
Preference number: 3 (lower is better)
Translates to: IWQLLEPKYKPC*HVYTSFWISAV
Trigger: TACAGCTGATATCCAAAAAGAAGTGTAAACATGCCAACAGGGTTTATATTTAGGTTCCAAGAGTTGCCAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
3UTR GCA 72 bp AAAATACAAATAGTAACACCTATCCAAAGATATCAGTaGACACTCATGACAGAAGATACTGCATATACCTTC +
Preference number: 3 (lower is better)
Translates to: KIQIVTPIQRYQ*TLMTEDTAYTF
Trigger: GAAGGTATATGCAGTATCTTCTGTCATGAGTGTGCACTGATATCTTTGGATAGGTGTTACTATTTGTATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATATTCCAGGCCCACGCCTaGCAGCACTCGGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIFQAHA*QHSGGE
Trigger: TTCTCCGCCCGAGTGCTGCCAGGCGTGGGCCTGGAA...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGGAGGCGGGCGGATCATaGGGTCAGGAGATCGAGCCC +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTREAGGS*GQEIEP
Trigger: GGGCTCGATCTCCTGACCTCATGATCCGCCCGCCTC...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAGTCGGTTACCCGCGGTaGCTGTCGTACCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIVGYPR*LSYPLT
Trigger: TGTGAGCGGGTACGACAGGCACCGCGGGTAACCGAC...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATACAGTGCACTGGCAACTaGAGCAAGGTGGCGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIQCTGN*SKVALF
Trigger: AAAGAGCGCCACCTTGCTGCAGTTGCCAGTGCACTG...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTCCCGCGTACCCGGCTaGAGCAAGGACCCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLSRVPG*SKDPGR
Trigger: ACGCCCCGGGTCCTTGCTGCAGCCGGGTACGCGGGA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCGGAGAAGGCGGGGTaGCGGTATCCCGCGTACCCG +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVAEKAG*RYPAYP
Trigger: CGGGTACGCGGGATACCGGCACCCCGCCTTCTCCGC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAAAGAGGAAGGCCATGTaGCCCTTCCAAATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIKRKAM*PFQMRA
Trigger: AGCCCTCATTTGGAAGGGTCACATGGCCTTCCTCTT...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGGGAAGGTTCTTCTTCTaGCCCCACTTGGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRGRFFF*PHLAGF
Trigger: AAAGCCTGCCAAGTGGGGTCAGAAGAAGAACCTTCC...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp TTAGCAAGGCCTTTAAAAGGAAGCCAAGAAATACTGAAGGAACTATTCAGGTTCGTCGGTTACCCGCGGTaGCTGTCGTACCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: LARPLKGSQEILKELFRFVGYPR*LSYPLT
Trigger: TGTGAGCGGGTACGACAGGCACCGCGGGTAACCGAC...GAACCTGAATAGTTCCTTCAGTATTTCTTGGCTTCCTTTTAAAGGCCTTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATACCAAGGCCCCATTTCTaGTCTGAATCCTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIPRPHF*SESFRD
Trigger: GTCTCTGAAGGATTCAGAGCAGAAATGGGGCCTTGG...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGTCGAGCCCAACATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRSSPTW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGGGCTCGA...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATAGTACAGTCAGATAGGTaGCAGAAAGTCTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIVQSDR*QKVSRL
Trigger: CAGTCTGGAGACTTTCTGCCACCTATCTGACTGTAC...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATACTCCCGGAAAGCACATaGAAATTTCTCAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSILPEST*KFLSQN
Trigger: GTTTTGGCTGAGAAATTTTCATGTGCTTTCCGGGAG...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATAAGAAGATGGATCAGCTaGCTTCTCAGACCACTACTA +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIRRWIS*LLRPLL
Trigger: TAGTAGTGGTCTGAGAAGTCAGCTGATCCATCTTCT...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATATTCCATGCTGTAAACTaGATGAGGCTGAGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIFHAVN*MRLSVG
Trigger: TCCTACACTCAGCCTCATTCAGTTTACAGCATGGAA...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAAAAAGTAAGGAGGTTTaGACCATTCCGTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIKSKEV*TIPSPA
Trigger: AGCTGGGGACGGAATGGTGCAAACCTCCTTACTTTT...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGGGCAGTTCCTTCTCTTaGTGTAATACTGCATGTGGC +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRGSSFS*CNTACG
Trigger: GCCACATGCAGTATTACAGCAAGAGAAGGAACTGCC...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCAGAAGAGATTCCCGGCTaGAGCAAGGACCCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSEEIPG*SKDPGR
Trigger: ACGCCCCGGGTCCTTGCTGCAGCCGGGAATCTCTTC...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAACTTTTCTGAATTGCTaGCAACATAGGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SYLTTGDRKEDHEGALKITFLNC*QHRCRQ
Trigger: CTGCCTGCACCTATGTTGTCAGCAATTCAGAAAAGT...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATATTTGTGCTATATTCCTaGCAAGGCCCCATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIFVLYS*QGPISA
Trigger: AGCAGAAATGGGGCCTTGGCAGGAATATAGCACAAA...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGGCTCTCAAGATACAGTaGTCATTTTTGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRALKIQ*SFLVWG
Trigger: TCCCCAGACCAAAAATGACCACTGTATCTTGAGAGC...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGAAACCTGCCTCCTGTaGCCCAGACCACCAACAGGA +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVETCLL*PRPPTG
Trigger: TCCTGTTGGTGGTCTGGGTCACAGGAGGCAGGTTTC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGGAAACCTGCCTCCTGTaGCCCAGACCACCAACAGGA +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLETCLL*PRPPTG
Trigger: TCCTGTTGGTGGTCTGGGTCACAGGAGGCAGGTTTC...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR TCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATAGTTTCAGTAACCCACTaGATGCCAAATATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIVSVTH*MPNISK
Trigger: CTTGGAAATATTTGGCATTCAGTGGGTTACTGAAAC...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGTTACAAAAGCAGGCTTaGGGAAATTCAGGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRLQKQA*GNSGGL
Trigger: TAGACCTCCTGAATTTCCTCAAGCCTGCTTTTGTAA...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATATTCAGATTCTCGACATaGTCGCAGAAGCATACTAAA +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIFRFST*SQKHTK
Trigger: TTTAGTATGCTTCTGCGAGCATGTCGAGAATCTGAA...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAAACACACGATACACATaGCCTGGAGATACAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SYLTTGDRKEDHEGALKINTRYT*PGDTKE
Trigger: TTCCTTTGTATCTCCAGGGCATGTGTATCGTGTGTT...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGTCTCCACAGTGCACTaGCAACTGCAGCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLVSTVH*QLQQGG
Trigger: GCCACCTTGCTGCAGTTGCCAGTGCACTGTGGAGAC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGGGTAGGATTTCCTTATaGCTTGCACAATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRGRISL*LAQCIS
Trigger: AGAAATGCATTGTGCAAGTCATAAGGAAATCCTACC...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATATTTAAAGATACTCCTTaGGCCAGAGAAGGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIFKDTP*AREGLK
Trigger: TTTCAACCCTTCTCTGGCTCAAGGAGTATCTTTAAA...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAATATGTCCTAAAGCATaGTTCAGTAGCAGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIICPKA*FSSSFS
Trigger: GGAAAAGCTGCTACTGAATCATGCTTTAGGACATAT...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCAGTGCACTGGCAACTaGAGCAAGGTGGCGCTCTTT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVQCTGN*SKVALF
Trigger: AAAGAGCGCCACCTTGCTGCAGTTGCCAGTGCACTG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGTTCCACAGTCCTCCATaGTTCCTTCCTTGCCATGGA +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLFHSPP*FLPCHG
Trigger: TCCATGGCAAGGAAGGAAGCATGGAGGACTGTGGAA...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGAAAACAAACAACCAGTaGATGCAAGGCACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRKTNNQ*MQGTAK
Trigger: TTTTGCAGTGCCTTGCATCCACTGGTTGTTTGTTTT...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAACTCATCAATCAACACTaGGGGAAGCTGAGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQLINQH*GKLSLQ
Trigger: TTGGAGGCTCAGCTTCCCTCAGTGTTGATTGATGAG...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGGTTCTTCAAATAGGCTaGTGTTGGTTAAATTGTCAC +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRVLQIG*CWLNCH
Trigger: GTGACAATTTAACCAACATCAGCCTATTTGAAGAAC...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACACAAATGAGGGCTCTCTaGGACGTTACAAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VLHILRFCIPQILYFRSTQMRAL*DVTKAG
Trigger: GCCTGCTTTTGTAACGTCTCAGAGAGCCCTCATTTG...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAAAGAGGAAGGCCATGTaGCCCTTCCAAATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLKRKAM*PFQMRA
Trigger: AGCCCTCATTTGGAAGGGTCACATGGCCTTCCTCTT...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAGGAAGGTTCTTCTTCTaGCCCCACTTGGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLGRFFF*PHLAGF
Trigger: AAAGCCTGCCAAGTGGGGTCAGAAGAAGAACCTTCC...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCCAAAGAGAAGGTGTaGAGAGATTCCCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLSKEKV*RDSRLQ
Trigger: CTGCAGCCGGGAATCTCTTCACACCTTCTCTTTGGA...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAACTGGTCTCAAACTCCTaGTCTCAAGTGATACGCCCA +
Preference number: 4 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQLVSNS*SQVIRP
Trigger: TGGGCGTATCACTTGAGATCAGGAGTTTGAGACCAG...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGGTGCTTCACATAATGTaGTATTTTGTAGGACATGAC +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRVLHIM*YFVGHD
Trigger: GTCATGTCCTACAAAATAGCACATTATGTGAAGCAC...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGGGCATACTATACTCTTaGCTGACAGGCAATATTTTT +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRGILYS*LTGNIF
Trigger: AAAAATATTGCCTGTCAGGCAAGAGTATAGTATGCC...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATAAGCACAATTCACAAATaGAATGAATTGGATAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSISTIHK*NELDSH
Trigger: ATGGCTATCCAATTCATTGCATTTGTGAATTGTGCT...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGAACAATTGCAATGTTTaGCTCCCAGAAATCACAAAG +
Preference number: 4 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRNNCNV*LPEITK
Trigger: CTTTGTGATTTCTGGGAGCCAAACATTGCAATTGTT...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATAGATGTAAGAAAACATTaGAAAGTGGGATCATTCATC +
Preference number: 4 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIDVRKH*KVGSFI
Trigger: GATGAATGATCCCACTTTCCAATGTTTTCTTACATC...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATGGATGGACAGGAACATaGCTCTCAGCATTCTGTACT +
Preference number: 4 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHGWTGT*LSAFCT
Trigger: AGTACAGAATGCTGAGAGTCATGTTCCTGTCCATCC...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCTCATCAATCAACACTaGGGGAAGCTGAGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLLINQH*GKLSLQ
Trigger: TTGGAGGCTCAGCTTCCCTCAGTGTTGATTGATGAG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCAAATGAGGGCTCTCTaGGACGTTACAAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLQMRAL*DVTKAG
Trigger: GCCTGCTTTTGTAACGTCTCAGAGAGCCCTCATTTG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTATGTGACCCTTCCAAATaGGGGCTCTCTGAGACGTTA +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLCDPSK*GLSETL
Trigger: TAACGTCTCAGAGAGCCCTCATTTGGAAGGGTCACA...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCTGAGGCTGAAAATCTaGTGGAGCTGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLLRLKI*WSCAWH
Trigger: ATGCCAAGCACAGCTCCATCAGATTTTCAGCCTCAG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCTGAGGCTGAAAATCTaGTGGAGCTGTGCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVLRLKI*WSCAWH
Trigger: ATGCCAAGCACAGCTCCATCAGATTTTCAGCCTCAG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATGCCCCATTTCTGCTCTaGATCCTTCAGAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYAPFLL*ILQRLS
Trigger: ACTCAGTCTCTGAAGGATTCAGAGCAGAAATGGGGC...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCCCCATTTCTGCTCTaGATCCTTCAGAGACTGAGT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVAPFLL*ILQRLS
Trigger: ACTCAGTCTCTGAAGGATTCAGAGCAGAAATGGGGC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGCACCAAGAATTCCTTTaGTTTCTCCCGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLHQEFL*FLPEST
Trigger: TGTGCTTTCCGGGAGAAAGCAAAGGAATTCTTGGTG...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATGAAATGTCTCCACAGTaGACTGGCAACTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYEMSPQ*TGNCSK
Trigger: CTTGCTGCAGTTGCCAGTGCACTGTGGAGACATTTC...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGAAATGTCTCCACAGTaGACTGGCAACTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLEMSPQ*TGNCSK
Trigger: CTTGCTGCAGTTGCCAGTGCACTGTGGAGACATTTC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAGTACTCTTTTTCAACTaGCTCTTCCAGATTTTTATC +
Preference number: 4 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIVLFFN*LFQIFI
Trigger: GATAAAAATCTGGAAGAGGCAGTTGAAAAAGAGTAC...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCCAAGGCCCCATTTCTaGTCTGAATCCTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLPRPHF*SESFRD
Trigger: GTCTCTGAAGGATTCAGAGCAGAAATGGGGCCTTGG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGAATGGATCCCTGGACTaGATTACAGGCATAGAGGAT +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLNGSLD*ITGIED
Trigger: ATCCTCTATGCCTGTAATCCAGTCCAGGGATCCATT...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCAACTGCAGCAAGGTaGCGCTCTTTAGCCGATAAT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVATAAR*RSLADN
Trigger: ATTATCGGCTAAAGAGCGCCACCTTGCTGCAGTTGC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAGCAACTGCAGCAAGGTaGCGCTCTTTAGCCGATAAT +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLATAAR*RSLADN
Trigger: ATTATCGGCTAAAGAGCGCCACCTTGCTGCAGTTGC...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATGCAAGTGGTAGATGGTaGTGTACTGCACAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHASGRW*CTAQRR
Trigger: CCTTCTTTGTGCAGTACACCACCATCTACCACTTGC...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGGATGGACAGGAACATaGCTCTCAGCATTCTGTACT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLGWTGT*LSAFCT
Trigger: AGTACAGAATGCTGAGAGTCATGTTCCTGTCCATCC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGGATGGACAGGAACATaGCTCTCAGCATTCTGTACT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVGWTGT*LSAFCT
Trigger: AGTACAGAATGCTGAGAGTCATGTTCCTGTCCATCC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACAACTTGTTTCCAAGGATaGGGGCCATTGCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: VLHILRFCIPQILYFRSTTCFQG*GPLLFI
Trigger: AATGAAGAGCAATGGCCCTCATCCTTGGAAACAAGT...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGCAACTTGAGGGCAGATaGTATCATCCCAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLQLEGR*YHPNQK
Trigger: TTTTTGGTTGGGATGATATCATCTGCCCTCAAGTTG...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGATTCCAAGGACTTTGTaGCCATGGCAGATTTATCAG +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLIPRTL*PWQIYQ
Trigger: CTGATAAATCTGCCATGGTCACAAAGTCCTTGGAAT...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACACCACTAACAGAATGTTaGGACAAAGCAGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: VLHILRFCIPQILYFRSTPLTEC*DKADEG
Trigger: CCCTTCATCTGCTTTGTCTCAACATTCTGTTAGTGG...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAAGCAGGAGGTAGTCTaGGATTTCAGGAGACTCCAA +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVKQEVV*DFRRLQ
Trigger: TTGGAGTCTCCTGAAATCTCAGACTACCTCCTGCTT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGGAACTCAATACTGAATaGCTTTTCCACAGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLELNTE*LFHSPP
Trigger: TGGAGGACTGTGGAAAAGTCATTCAGTATTGAGTTC...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCATCCAAAGAGAAGGTGTaGAGAGATTCCCGCTCACAT +
Preference number: 4 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSSKEKV*RDSRSH
Trigger: ATGTGAGCGGGAATCTCTTCACACCTTCTCTTTGGA...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496119.2
CDS-3UTR TCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGAAAAACCAGTGCTTGTaGACCGCTGGGCTCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLKNQCL*TAGLKE
Trigger: TTCTTTGAGCCCAGCGGTTCACAAGCACTGGTTTTT...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAAGTCAGGAACGTCGATaGAGCAGAACAGTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLSQERR*SRTVLH
Trigger: ATGGAGAACTGTTCTGCTGCATCGACGTTCCTGACT...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAAAAGTAAGGAGGTTTaGACCATTCCGTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVKSKEV*TIPSPA
Trigger: AGCTGGGGACGGAATGGTGCAAACCTCCTTACTTTT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGAAAAGTAAGGAGGTTTaGACCATTCCGTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLKSKEV*TIPSPA
Trigger: AGCTGGGGACGGAATGGTGCAAACCTCCTTACTTTT...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR GCA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGAAAAGTAAGGAGGTTTaGACCATTCCGTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKKSKEV*TIPSPA
Trigger: AGCTGGGGACGGAATGGTGCAAACCTCCTTACTTTT...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGGCAGTTCCTTCTCTTaGTGTAATACTGCATGTGGC +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVGSSFS*CNTACG
Trigger: GCCACATGCAGTATTACAGCAAGAGAAGGAACTGCC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGCTTTTACCATGTATTaGAGGTTCTCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLAFTMY*RFSVAS
Trigger: GCTGGCCACAGAGAACCTGCAATACATGGTAAAAGC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTTTTACCATGTATTaGAGGTTCTCTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVAFTMY*RFSVAS
Trigger: GCTGGCCACAGAGAACCTGCAATACATGGTAAAAGC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTATAGGCTTCCCTTTGTaGTATATTCCTGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVIGFPL*YIPAKA
Trigger: GGCCTTGGCAGGAATATAGCACAAAGGGAAGCCTAT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATAGGCTTCCCTTTGTaGTATATTCCTGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLIGFPL*YIPAKA
Trigger: GGCCTTGGCAGGAATATAGCACAAAGGGAAGCCTAT...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAGGGTAGAAATCAAGTaGATGACAACCTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVRVEIK*MTTCWS
Trigger: GGACCAGCAGGTTGTCATCCACTTGATTTCTACCCT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAGTTTGAGACCCAGGTaGGTTCCCAAAACTAGGACT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVSLRPR*VPKTRT
Trigger: AGTCCTAGTTTTGGGAACCCACCTGGGTCTCAAACT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAGTCGTATCTTACGACTaGGGACAGGAAAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLVVSYD*GQERRP
Trigger: TGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGAC...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAAACCAACAGGAATCTTTaGGGTCTAAACCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQTNRNL*GLNRKQ
Trigger: CTGTTTGCGGTTTAGACCCCAAAGATTCCTGTTGGT...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CCA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCAGTGCTTGTGAACCGCTaGGCTCAAAGAACACAAAAG +
Preference number: 4 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSVLVNR*AQRTQK
Trigger: CTTTTGTGTTCTTTGAGCCCAGCGGTTCACAAGCAC...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGCAACCAGTTCCAAAATaGTTCCGAGACAAACCATTT +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLQPVPK*FRDKPF
Trigger: AAATGGTTTGTCTCGGAATCATTTTGGAACTGGTTG...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTACTTGTTTCCAAGGATaGGGGCCATTGCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLTCFQG*GPLLFI
Trigger: AATGAAGAGCAATGGCCCTCATCCTTGGAAACAAGT...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCAACTTGTTTCCAAGGATaGGGGCCATTGCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSTCFQG*GPLLFI
Trigger: AATGAAGAGCAATGGCCCTCATCCTTGGAAACAAGT...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACAAGGAGGTCTAAAACATaGCTTGCAACATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: VLHILRFCIPQILYFRSTRRSKT*LATSST
Trigger: GGTAGAAGATGTTGCAAGTCATGTTTTAGACCTCCT...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTACTCCCGGAAAGCACATaGAAATTTCTCAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLLPEST*KFLSQN
Trigger: GTTTTGGCTGAGAAATTTTCATGTGCTTTCCGGGAG...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAACTTTTCTGAATTGCTaGCAACATAGGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLTFLNC*QHRCRQ
Trigger: CTGCCTGCACCTATGTTGTCAGCAATTCAGAAAAGT...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGGAACAAACTCAGATTTaGCCAAAAGACAATGGCTTG +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLEQTQI*PKDNGL
Trigger: CAAGCCATTGTCTTTTGGTCAAATCTGAGTTTGTTC...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATCAGGAAAGAAGACCATaGAGGTGCTCTCAAGATACA +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYQERRP*RCSQDT
Trigger: TGTATCTTGAGAGCACCTTCATGGTCTTCTTTCCTG...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATTTGAGACAAAGCAGATaGAGGGTCGTATCTTACGAC +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYLRQSR*RVVSYD
Trigger: GTCGTAAGATACGACCCTTCATCTGCTTTGTCTCAA...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAGGCTGAGTGTAGGATaGACATGGCAATCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVRLSVG*TWQSEK
Trigger: TTTCTCTGATTGCCATGTTCATCCTACACTCAGCCT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp TTAGCAAGGCCTTTAAAAGGAAGCCAAGAAATACTGAAGGAACTATTCAGGTTCAGAGGATTCTTTCACTaGAGATCTTTGAAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LARPLKGSQEILKELFRFRGFFH*RSLKAG
Trigger: TCCTGCTTTCAAAGATCTTCAGTGAAAGAATCCTCT...GAACCTGAATAGTTCCTTCAGTATTTCTTGGCTTCCTTTTAAAGGCCTTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp TTAGCAAGGCCTTTAAAAGGAAGCCAAGAAATACTGAAGGAACTATTCAGGTTCATCAGTGCACACTCATaGCAGAAGATACTGCATATA +
Preference number: 4 (lower is better)
Translates to: LARPLKGSQEILKELFRFISAHS*QKILHI
Trigger: TATATGCAGTATCTTCTGTCATGAGTGTGCACTGAT...GAACCTGAATAGTTCCTTCAGTATTTCTTGGCTTCCTTTTAAAGGCCTTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCACCAAGAATTCCTTTaGTTTCTCCCGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVHQEFL*FLPEST
Trigger: TGTGCTTTCCGGGAGAAAGCAAAGGAATTCTTGGTG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGAATCGCCCAATATACTaGTCAATAACATTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLNRPIY*SITFPS
Trigger: GCTAGGGAATGTTATTGAGCAGTATATTGGGCGATT...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGCCAAGCATTTTAAAATaGCAGGGAGGAGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLPSILK*QGGVVQ
Trigger: TTGAACTACTCCTCCCTGGCATTTTAAAATGCTTGG...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTTTTGTGCTATATTCCTaGCAAGGCCCCATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVFVLYS*QGPISA
Trigger: AGCAGAAATGGGGCCTTGGCAGGAATATAGCACAAA...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACATCATTTTCCAGTCTCTaGATCTCATCTTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: VLHILRFCIPQILYFRSTSFSSL*ISSCPI
Trigger: GATGGGACAAGATGAGATGCAGAGACTGGAAAATGA...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGCCTATACAGTTTCCATaGTGTAAACTGAATGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLPIQFP*CKLNEA
Trigger: AGCCTCATTCAGTTTACAGCATGGAAACTGTATAGG...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp TTAGCAAGGCCTTTAAAAGGAAGCCAAGAAATACTGAAGGAACTATTCAGGTTCCCTGGCCTTAAGTTTTaGAACTTCTATAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: LARPLKGSQEILKELFRFPGLKF*NFYNWL
Trigger: AAGCCAGTTATAGAAGTTGCAAAACTTAAGGCCAGG...GAACCTGAATAGTTCCTTCAGTATTTCTTGGCTTCCTTTTAAAGGCCTTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATGTTTCCTTGAAGAGTTaGAGGATGAAGGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYVSLKS*RMKARM
Trigger: CATTCTGGCCTTCATCCTCCAACTCTTCAAGGAAAC...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGTTTCCTTGAAGAGTTaGAGGATGAAGGCCAGAATG +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVVSLKS*RMKARM
Trigger: CATTCTGGCCTTCATCCTCCAACTCTTCAAGGAAAC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTCTTCTGACCCCACTTaGCAGGCTTTTACCATGTAT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLSSDPT*QAFTMY
Trigger: ATACATGGTAAAAGCCTGCCAAGTGGGGTCAGAAGA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTATCTTCTGACCCCACTTaGCAGGCTTTTACCATGTAT +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLSSDPT*QAFTMY
Trigger: ATACATGGTAAAAGCCTGCCAAGTGGGGTCAGAAGA...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTAACACAGAAGTCAGCTaGGAGGAAGGTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLNTEVS*EEGSSS
Trigger: AGAAGAAGAACCTTCCTCCCAGCTGACTTCTGTGTT...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAACACAGAAGTCAGCTaGGAGGAAGGTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVNTEVS*EEGSSS
Trigger: AGAAGAAGAACCTTCCTCCCAGCTGACTTCTGTGTT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTATGGATGACAACCTGCTaGTCCAATGTTGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLWMTTC*SNVATV
Trigger: AACAGTAGCAACATTGGACCAGCAGGTTGTCATCCA...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTGGATGACAACCTGCTaGTCCAATGTTGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLWMTTC*SNVATV
Trigger: AACAGTAGCAACATTGGACCAGCAGGTTGTCATCCA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCTCCTTAGTGACTGCTaGAACTTTCCAAGCCATACA +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVLLSDC*NFPSHT
Trigger: TGTATGGCTTGGAAAGTTCCAGCAGTCACTAAGGAG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCAACCAACAGGAATCTTTaGGGTCTAAACCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSTNRNL*GLNRKQ
Trigger: CTGTTTGCGGTTTAGACCCCAAAGATTCCTGTTGGT...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR TCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATCCTTGTCGTACCTGTTaGGTGACAGGCTTATTAAAT +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYPCRTC*VTGLLN
Trigger: ATTTAATAAGCCTGTCACTCAACAGGTACGACAAGG...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCCTTGTCGTACCTGTTaGGTGACAGGCTTATTAAAT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLPCRTC*VTGLLN
Trigger: ATTTAATAAGCCTGTCACTCAACAGGTACGACAAGG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGCCTTGTCGTACCTGTTaGGTGACAGGCTTATTAAAT +
Preference number: 4 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKPCRTC*VTGLLN
Trigger: ATTTAATAAGCCTGTCACTCAACAGGTACGACAAGG...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGCTGTGGTCTAGAAGATaGATAAGTAGAACCCATAAT +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLLWSRR*ISRTHN
Trigger: ATTATGGGTTCTACTTATTCATCTTCTAGACCACAG...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATCAACCAGTTCCAAAATaGTTCCGAGACAAACCATTT +
Preference number: 4 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHQPVPK*FRDKPF
Trigger: AAATGGTTTGTCTCGGAATCATTTTGGAACTGGTTG...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAAGAAGCCAAGAAATACTaGAGGAACTATTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQEAKKY*RNYSGS
Trigger: AGAACCTGAATAGTTCCTTCAGTATTTCTTGGCTTC...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAGGAGGTCTAAAACATaGCTTGCAACATCTTCTACC +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVRRSKT*LATSST
Trigger: GGTAGAAGATGTTGCAAGTCATGTTTTAGACCTCCT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTTACAAAAGCAGGCTTaGGGAAATTCAGGAGGTCTA +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLLQKQA*GNSGGL
Trigger: TAGACCTCCTGAATTTCCTCAAGCCTGCTTTTGTAA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCAACTTGAGGGCAGATaGTATCATCCCAACCAAAAA +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVQLEGR*YHPNQK
Trigger: TTTTTGGTTGGGATGATATCATCTGCCCTCAAGTTG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGAAAAGATACATAGCCTaGATGAGAAAGTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLKRYIA*MRKCFT
Trigger: TGTGAAGCACTTTCTCATTCAGGCTATGTATCTTTT...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCCAGATTTTTATCTATaGGCAAATCATCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLPDFYL*ANHQAQ
Trigger: CTGGGCCTGATGATTTGCTCATAGATAAAAATCTGG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCCAGATTTTTATCTATaGGCAAATCATCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVPDFYL*ANHQAQ
Trigger: CTGGGCCTGATGATTTGCTCATAGATAAAAATCTGG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTATTCCAAGGACTTTGTaGCCATGGCAGATTTATCAG +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVIPRTL*PWQIYQ
Trigger: CTGATAAATCTGCCATGGTCACAAAGTCCTTGGAAT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGCTTCCAACCAACCTCTaGTTCTACTACAGCTTAATC +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLLPTNL*FYYSLI
Trigger: GATTAAGCTGTAGTAGAATCAGAGGTTGGTTGGAAG...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGGCATATACCTTCCTTTaGCTTGTTTCCAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLAYTFL*LVSKDE
Trigger: CTCATCCTTGGAAACAAGTCAAAGGAAGGTATATGC...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp TTAGCAAGGCCTTTAAAAGGAAGCCAAGAAATACTGAAGGAACTATTCAGGTTCAATAGTACACACTGCTaGCTAATATTGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LARPLKGSQEILKELFRFNSTHC*LILSAL
Trigger: CAAAGCAGACAATATTAGGCAGCAGTGTGTACTATT...GAACCTGAATAGTTCCTTCAGTATTTCTTGGCTTCCTTTTAAAGGCCTTGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACATGGAGATGTAATAAATaGCATGACGGTGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: VLHILRFCIPQILYFRSTWRCNK*HDGGKS
Trigger: GCTTTTTCCACCGTCATGGCATTTATTACATCTCCA...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAAACACACGATACACATaGCCTGGAGATACAAAGGAA +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLNTRYT*PGDTKE
Trigger: TTCCTTTGTATCTCCAGGGCATGTGTATCGTGTGTT...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGGTGAGACAAAAGTTTaGTATAGGCTTCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLGETKV*YRLPFV
Trigger: CACAAAGGGAAGCCTATAGCAAACTTTTGTCTCACC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTATCATTTTCCAGTCTCTaGATCTCATCTTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLSFSSL*ISSCPI
Trigger: GATGGGACAAGATGAGATGCAGAGACTGGAAAATGA...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAAACTCCTTAGTGACTaGTGGAACTTTCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVKLLSD*WNFPSH
Trigger: ATGGCTTGGAAAGTTCCAGCAGTCACTAAGGAGTTT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATTCCCAAAATCACAACTaGACTGTAACAAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHSQNHN*TVTRFP
Trigger: TGGAAACCTTGTTACAGTCCAGTTGTGATTTTGGGA...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CCA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGCGGAATAGTAATTTTTaGGCTTTAGAAGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLRNSNF*ALEVAK
Trigger: CTTTGCCACTTCTAAAGCCCAAAAATTACTATTCCG...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTACGATACACATGCCCTaGAGATACAAAGGAAGACTT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLTIHMP*RYKGRL
Trigger: AAGTCTTCCTTTGTATCTCCAGGGCATGTGTATCGT...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
3UTR CAA 72 bp TTTGGGCCACCAAATATTTTCACGTACATTATCCCATaGATTCTCACAACAACACTGTCAAATAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: FGPPNIFTYIIP*ILTTTLSNSKG
Trigger: CCCTTTACTATTTGACAGTGTTGTTGTGAGAATCAATGGGATAATGTACGTGAAAATATTTGGTGGCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGTTTCAGTAACCCACTaGATGCCAAATATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLVSVTH*MPNISK
Trigger: CTTGGAAATATTTGGCATTCAGTGGGTTACTGAAAC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGGTTTCAGTAACCCACTaGATGCCAAATATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLVSVTH*MPNISK
Trigger: CTTGGAAATATTTGGCATTCAGTGGGTTACTGAAAC...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR TCA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAAGTTCTTCAAATAGGCTaGTGTTGGTTAAATTGTCAC +
Preference number: 4 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQVLQIG*CWLNCH
Trigger: GTGACAATTTAACCAACATCAGCCTATTTGAAGAAC...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCAACCAGTTCCAAAATaGTTCCGAGACAAACCATTT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVQPVPK*FRDKPF
Trigger: AAATGGTTTGTCTCGGAATCATTTTGGAACTGGTTG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGAAGCCAAGAAATACTaGAGGAACTATTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLEAKKY*RNYSGS
Trigger: AGAACCTGAATAGTTCCTTCAGTATTTCTTGGCTTC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACAAAAGATTTGTGCCCATaGTTTCACAAGAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: VLHILRFCIPQILYFRSTKDLCP*FHKNSH
Trigger: ATGGGAATTCTTGTGAAATCATGGGCACAAATCTTT...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAGGTAGGATTTCCTTATaGCTTGCACAATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLGRISL*LAQCIS
Trigger: AGAAATGCATTGTGCAAGTCATAAGGAAATCCTACC...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATCGTACATTATCCCATTaGTTCTCACAACAACACTGT +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYRTLSH*FSQQHC
Trigger: ACAGTGTTGTTGTGAGAATCAATGGGATAATGTACG...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGAAGCCAAGAAATACTaGAGGAACTATTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVEAKKY*RNYSEH
Trigger: GTGTTCAGAATAGTTCCTTCAGTATTTCTTGGCTTC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369251.6
CDS-3UTR TCA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATAGGAATTTCATTAAGTaGTTCTTGAGAAGTCCCTAC +
Preference number: 4 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHRNFIK*FLRSPY
Trigger: GTAGGGACTTCTCAAGAATCACTTAATGAAATTCCT...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAATATTCAGGACAGAAATaGGTAATGCTCATGAGAGTT +
Preference number: 4 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQYSGQK*VMLMRV
Trigger: AACTCTCATGAGCATTACTCATTTCTGTCCTGAATA...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTGGAGATGTAATAAATaGCATGACGGTGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLWRCNK*HDGGKS
Trigger: GCTTTTTCCACCGTCATGGCATTTATTACATCTCCA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCATGGAGATGTAATAAATaGCATGACGGTGGAAAAAGC +
Preference number: 4 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSWRCNK*HDGGKS
Trigger: GCTTTTTCCACCGTCATGGCATTTATTACATCTCCA...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTTTCAGATTCTCGACATaGTCGCAGAAGCATACTAAA +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVFRFST*SQKHTK
Trigger: TTTAGTATGCTTCTGCGAGCATGTCGAGAATCTGAA...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAAATCGCCCAATATACTaGTCAATAACATTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLNRPIY*SITFPS
Trigger: GCTAGGGAATGTTATTGAGCAGTATATTGGGCGATT...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCCAAGCATTTTAAAATaGCAGGGAGGAGTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLPSILK*QGGVVQ
Trigger: TTGAACTACTCCTCCCTGGCATTTTAAAATGCTTGG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATATGGGGAGACATGAGTaGTATGATAACATACGGTTT +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYMGRHE*YDNIRF
Trigger: AAACCGTATGTTATCATAGCACTCATGTCTCCCCAT...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATTCCCAAAATCACAACTaGACTGTAACAAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYSQNHN*TVTRFP
Trigger: TGGAAACCTTGTTACAGTCCAGTTGTGATTTTGGGA...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTCCCAAAATCACAACTaGACTGTAACAAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLSQNHN*TVTRFP
Trigger: TGGAAACCTTGTTACAGTCCAGTTGTGATTTTGGGA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAATTTTCTCATTTCATCTaGTACTCCATGGCGATCAAA +
Preference number: 4 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQFSHFI*YSMAIK
Trigger: TTTGATCGCCATGGAGTACCAGATGAAATGAGAAAA...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATGAAAACATTGGAAAGTaGGATCATTCATCTGGGACA +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYENIGK*DHSSGT
Trigger: TGTCCCAGATGAATGATCCCACTTTCCAATGTTTTC...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAGCCTCTACAAAAAGTTaGTCCTCCATATACTCAGAT +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLASTKS*SSIYSD
Trigger: ATCTGAGTATATGGAGGACCAACTTTTTGTAGAGGC...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp TTAGCAAGGCCTTTAAAAGGAAGCCAAGAAATACTGAAGGAACTATTCAGGTTCTGCAACTTCTATAACTaGCTTATTCAGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: LARPLKGSQEILKELFRFCNFYN*LIQDRN
Trigger: ATTTCTGTCCTGAATAAGCCAGTTATAGAAGTTGCA...GAACCTGAATAGTTCCTTCAGTATTTCTTGGCTTCCTTTTAAAGGCCTTGCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTATGTACAGTTGTTGCCTaGATAAATGAAAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLCTVVA*INERVL
Trigger: GAGAACTCTTTCATTTATTCAGGCAACAACTGTACA...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTTGTACAGTTGTTGCCTaGATAAATGAAAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVCTVVA*INERVL
Trigger: GAGAACTCTTTCATTTATTCAGGCAACAACTGTACA...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTGTACAGTTGTTGCCTaGATAAATGAAAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLCTVVA*INERVL
Trigger: GAGAACTCTTTCATTTATTCAGGCAACAACTGTACA...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR TCA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCATGTACAGTTGTTGCCTaGATAAATGAAAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSCTVVA*INERVL
Trigger: GAGAACTCTTTCATTTATTCAGGCAACAACTGTACA...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTACAAGAGTAATCCATaGAGCTCATCAATCAACACT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLYKSNP*SSSINT
Trigger: AGTGTTGATTGATGAGCTTCATGGATTACTCTTGTA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCATACAAGAGTAATCCATaGAGCTCATCAATCAACACT +
Preference number: 4 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSYKSNP*SSSINT
Trigger: AGTGTTGATTGATGAGCTTCATGGATTACTCTTGTA...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGTTCTTCAAATAGGCTaGTGTTGGTTAAATTGTCAC +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLVLQIG*CWLNCH
Trigger: GTGACAATTTAACCAACATCAGCCTATTTGAAGAAC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGGTTCTTCAAATAGGCTaGTGTTGGTTAAATTGTCAC +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLVLQIG*CWLNCH
Trigger: GTGACAATTTAACCAACATCAGCCTATTTGAAGAAC...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCTGTGGTCTAGAAGATaGATAAGTAGAACCCATAAT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLLWSRR*ISRTHN
Trigger: ATTATGGGTTCTACTTATTCATCTTCTAGACCACAG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGCTGTGGTCTAGAAGATaGATAAGTAGAACCCATAAT +
Preference number: 4 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKLWSRR*ISRTHN
Trigger: ATTATGGGTTCTACTTATTCATCTTCTAGACCACAG...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTATCTTCTTCGGTCACTTaGTTTTTCAAGCAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLSSSVT*FFKQCF
Trigger: AAAACACTGCTTGAAAAATCAAGTGACCGAAGAAGA...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCTTCTTCGGTCACTTaGTTTTTCAAGCAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLSSSVT*FFKQCF
Trigger: AAAACACTGCTTGAAAAATCAAGTGACCGAAGAAGA...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAAAAGATACATAGCCTaGATGAGAAAGTGCTTCACA +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVKRYIA*MRKCFT
Trigger: TGTGAAGCACTTTCTCATTCAGGCTATGTATCTTTT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATTTCAACTTGGGCCTTTaGGAAAATACTCTTTACTTC +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYFNLGL*ENTLYF
Trigger: GAAGTAAAGAGTATTTTCTCAAAGGCCCAAGTTGAA...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR TCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTTTCAACTTGGGCCTTTaGGAAAATACTCTTTACTTC +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVFNLGL*ENTLYF
Trigger: GAAGTAAAGAGTATTTTCTCAAAGGCCCAAGTTGAA...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTAAAGATTTGTGCCCATaGTTTCACAAGAATTCCCAT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLKDLCP*FHKNSH
Trigger: ATGGGAATTCTTGTGAAATCATGGGCACAAATCTTT...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR TCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTAACTATTCTGAACACTaGTGGACTTTTTCAGCAGTT +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLNYSEH*WTFSAV
Trigger: AACTGCTGAAAAAGTCCATCAGTGTTCAGAATAGTT...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369251.6
CDS-3UTR GCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATAATAGTACACACTGCTaGCTAATATTGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYNSTHC*LILSAL
Trigger: CAAAGCAGACAATATTAGGCAGCAGTGTGTACTATT...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAATAGTACACACTGCTaGCTAATATTGTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVNSTHC*LILSAL
Trigger: CAAAGCAGACAATATTAGGCAGCAGTGTGTACTATT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATAGAAATAGTACACACTaGTGCCTAATATTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYRNSTH*CLILSA
Trigger: AGCAGACAATATTAGGCAGCAGTGTGTACTATTTCT...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAGAAATAGTACACACTaGTGCCTAATATTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVRNSTH*CLILSA
Trigger: AGCAGACAATATTAGGCAGCAGTGTGTACTATTTCT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGAGAAATAGTACACACTaGTGCCTAATATTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKRNSTH*CLILSA
Trigger: AGCAGACAATATTAGGCAGCAGTGTGTACTATTTCT...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGTGCTTCACATAATGTaGTATTTTGTAGGACATGAC +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVVLHIM*YFVGHD
Trigger: GTCATGTCCTACAAAATAGCACATTATGTGAAGCAC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR GCA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCACATGACAGAAGATACTaGATATACCTTCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSHDRRY*IYLPLT
Trigger: AGTCAAAGGAAGGTATATGCAGTATCTTCTGTCATG...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGATCCAAAGATATCAGTaGACACTCATGACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKIQRYQ*TLMTED
Trigger: ATCTTCTGTCATGAGTGTGCACTGATATCTTTGGAT...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTTTTCTCATTTCATCTaGTACTCCATGGCGATCAAA +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLFSHFI*YSMAIK
Trigger: TTTGATCGCCATGGAGTACCAGATGAAATGAGAAAA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGAACAATTGCAATGTTTaGCTCCCAGAAATCACAAAG +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLNNCNV*LPEITK
Trigger: CTTTGTGATTTCTGGGAGCCAAACATTGCAATTGTT...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCGGAATAGTAATTTTTaGGCTTTAGAAGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVRNSNF*ALEVAK
Trigger: CTTTGCCACTTCTAAAGCCCAAAAATTACTATTCCG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CCA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTAGTTATAAGAAGCTCTaGCTAAAGAGCAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: VKSSKDPITQLLINLQFLSYKKL*LKSKKM
Trigger: CATCTTCTTGCTCTTTAGCCAGAGCTTCTTATAACT...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTACAAATGCAATGAATTaGATAGCCATTGGCACATCA +
Preference number: 4 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVTNAMN*IAIGTS
Trigger: TGATGTGCCAATGGCTATCCAATTCATTGCATTTGT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CCA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGAAGCAAAATCACAACTaGACTGTAACAAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLKQNHN*TVTRFP
Trigger: TGGAAACCTTGTTACAGTCCAGTTGTGATTTTGCTT...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496119.2
CDS-3UTR CCA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATAGAACATTAGTTATCTaGTTCTACTATACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHRTLVI*FYYTVV
Trigger: GACCACAGTATAGTAGAACCAGATAACTAATGTTCT...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR GCA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAGTACTCTTTTTCAACTaGCTCTTCCAGATTTTTATC +
Preference number: 4 (lower is better)
Translates to: KVECSFVKSSKDPITQLLVLFFN*LFQIFI
Trigger: GATAAAAATCTGGAAGAGGCAGTTGAAAAAGAGTAC...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS GCA 90 bp GATTCCAGGCCCACGCCTGGCAGCACTCGGGCGGAGAAGGCGGGGTaGCGGTATCCCGCGTACCCGGCTGCAGCAAGGACCCGGGGCGTC +
Preference number: 5 (lower is better)
Translates to: DSRPTPGSTRAEKAG*RYPAYPAAARTRGV
Trigger: GACGCCCCGGGTCCTTGCTGCAGCCGGGTACGCGGGATACCGGCACCCCGCCTTCTCCGCCCGAGTGCTGCCAGGCGTGGGCCTGGAATC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS GCA 90 bp CACTCGGGCGGAGAAGGCGGGGTGCCGGTATCCCGCGTACCCGGCTaGAGCAAGGACCCGGGGCGTCGGTTACCCGCGGTGCCTGTCGTA +
Preference number: 5 (lower is better)
Translates to: HSGGEGGVPVSRVPG*SKDPGRRLPAVPVV
Trigger: TACGACAGGCACCGCGGGTAACCGACGCCCCGGGTCCTTGCTGCAGCCGGGTACGCGGGATACCGGCACCCCGCCTTCTCCGCCCGAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS GCA 90 bp GCGTACCCGGCTGCAGCAAGGACCCGGGGCGTCGGTTACCCGCGGTaGCTGTCGTACCCGCTCACATTTCCAGCTCCCGAAACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: AYPAAARTRGVGYPR*LSYPLTFPAPETCL
Trigger: GAGGCAGGTTTCGGGAGCTGGAAATGTGAGCGGGTACGACAGGCACCGCGGGTAACCGACGCCCCGGGTCCTTGCTGCAGCCGGGTACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS GCA 90 bp AGATTCCCGGCTGCAGCAAGGACCCGGGGCGTCGGTTACCCGCGGTaGCTGTCGTACCCGCTCACATTTCCAGCTCCCGAAACCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RFPAAARTRGVGYPR*LSYPLTFPAPETCL
Trigger: GAGGCAGGTTTCGGGAGCTGGAAATGTGAGCGGGTACGACAGGCACCGCGGGTAACCGACGCCCCGGGTCCTTGCTGCAGCCGGGAATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS CCA 90 bp TCCCGAAACCTGCCTCCTGTGACCCAGACCACCAACAGGAATCTTTaGGGTCTAAACCGCAAACAGGCGAAATTCCCGCCACCGCGCGCC +
Preference number: 5 (lower is better)
Translates to: SRNLPPVTQTTNRNL*GLNRKQAKFPPPRA
Trigger: GGCGCGCGGTGGCGGGAATTTCGCCTGTTTGCGGTTTAGACCCCAAAGATTCCTGTTGGTGGTCTGGGTCACAGGAGGCAGGTTTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496119.2
ENST00000508820.1
ENST00000683635.1
CDS CCA 90 bp AACACAGAAGTCAGCTGGGAGGAAGGTTCTTCTTCTGACCCCACTTaGCAGGCTTTTACCATGTATTGCAGGTTCTCTGTGGCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: NTEVSWEEGSSSDPT*QAFTMYCRFSVASL
Trigger: AAGGCTGGCCACAGAGAACCTGCAATACATGGTAAAAGCCTGCCAAGTGGGGTCAGAAGAAGAACCTTCCTCCCAGCTGACTTCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000514790.1
ENST00000683635.1
CDS-3UTR CAA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGCTGATGGAGCTGTGCTaGGCATGTCCATTGCTAGCA +
Preference number: 5 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRLMELC*ACPLLA
Trigger: TGCTAGCAATGGACATGCCAAGCACAGCTCCATCAG...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS TCA 90 bp GGCTTCCCTTTGTGCTATATTCCTGCCAAGGCCCCATTTCTGCTCTaGATCCTTCAGAGACTGAGTAAGGGTAGAAATCAAGTGGATGAC +
Preference number: 5 (lower is better)
Translates to: GFPLCYIPAKAPFLL*ILQRLSKGRNQVDD
Trigger: GTCATCCACTTGATTTCTACCCTTACTCAGTCTCTGAAGGATTCAGAGCAGAAATGGGGCCTTGGCAGGAATATAGCACAAAGGGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS TCA 90 bp ACAAAAAGTCCTCCGAGGGTAGAGAAGACTCCCTGTGCTTCATACTaGAACACTGTTCTTTTCCTGCCTTCAGACTTGGACTCAGACTGG +
Preference number: 5 (lower is better)
Translates to: TKSPPRVEKTPCASY*NTVLFLPSDLDSDW
Trigger: CCAGTCTGAGTCCAAGTCTGAAGGCAGGAAAAGAACAGTGTTTCAGTATGAAGCACAGGGAGTCTTCTCTACCCTCGGAGGACTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506256.5
ENST00000511335.5
CDS-3UTR CAA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATAACACCAAGAATTCCTTaGCTTTCTCCCGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: SPAVNPEEPASTKSWSSITPRIP*LSPGKH
Trigger: GTGCTTTCCGGGAGAAAGCAAAGGAATTCTTGGTGT...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS TCA 90 bp ATATTCCTGCCAAGGCCCCATTTCTGCTCTGAATCCTTCAGAGACTaGGTAAGGGTAGAAATCAAGTGGATGACAACCTGCTGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: IFLPRPHFCSESFRD*VRVEIKWMTTCWSN
Trigger: ATTGGACCAGCAGGTTGTCATCCACTTGATTTCTACCCTTACTCAGTCTCTGAAGGATTCAGAGCAGAAATGGGGCCTTGGCAGGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS CCA 90 bp CCTTCAGACTTGGACTCAGACTGGAAATTACACCATTGGCTTTCCTaGTTTGCAGACCTTTGGACTGAGACTGGAAACTATACCATCAGC +
Preference number: 5 (lower is better)
Translates to: PSDLDSDWKLHHWLS*FADLWTETGNYTIS
Trigger: GCTGATGGTATAGTTTCCAGTCTCAGTCCAAAGGTCTGCAAACCAGGAAAGCCAATGGTGTAATTTCCAGTCTGAGTCCAAGTCTGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506256.5
ENST00000511335.5
CDS TCA 90 bp TTTCTCTTCTGGTGCCCTTCACCACCCAATCACCAATGGGTACCATaGTTCATTTTTGCCTTCTACAGAAACTCCATGTCATGTGGACAC +
Preference number: 5 (lower is better)
Translates to: FLFWCPSPPNHQWVP*FIFAFYRNSMSCGH
Trigger: GTGTCCACATGACATGGAGTTTCTGTAGAAGGCAAAAATGAATCATGGTACCCATTGGTGATTGGGTGGTGAAGGGCACCAGAAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS GCA 90 bp TGTATACAGCTGACGTTTGAACAACACGGGTTTGAAATGCATGGGTaGGCTTATACATGGATTTTCTTCCATCTCTACCACCCCGAAGAC +
Preference number: 5 (lower is better)
Translates to: CIQLTFEQHGFEMHG*AYTWIFFHLYHPED
Trigger: GTCTTCGGGGTGGTAGAGATGGAAGAAAATCCATGTATAAGCGCACCCATGCATTTCAAACCCGTGTTGTTCAAACGTCAGCTGTATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS GCA 90 bp ACCACTGTTAGTTCTCTTCTCAGAGTAGTTTTTCTCAGACTGCCCTaGCTTGCTAGAAAGGCTCGTGGTAAGAGCTTTAGAGGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: TTVSSLLRVVFLRLP*LARKARGKSFRGFL
Trigger: CAGAAAACCTCTAAAGCTCTTACCACGAGCCTTTCTAGCAAGGCAGGGCAGTCTGAGAAAAACTACTCTGAGAAGAGAACTAACAGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS-3UTR CAA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGCACTGCTGCCTAATATaGTCTGCTTTGCAGTGTAGA +
Preference number: 5 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRHCCLI*SALQCR
Trigger: TCTACACTGCAAAGCAGACAATATTAGGCAGCAGTG...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAGTCCACATTGTCCCTTaGAAGTTCCTGACACAATTG +
Preference number: 5 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIVHIVP*KFLTQL
Trigger: CAATTGTGTCAGGAACTTCAAAGGGACAATGTGGAC...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGAGTTTCCTTGAAGAGTaGGAGGATGAAGGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRSFLEE*EDEGQN
Trigger: ATTCTGGCCTTCATCCTCCAACTCTTCAAGGAAACT...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGCCTGCTGGTCCAATGTaGCTACTGTTTCTAAAATGC +
Preference number: 5 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRPAGPM*LLFLKC
Trigger: GCATTTTAGAAACAGTAGCAACATTGGACCAGCAGG...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATACCAAAAGACAATGGCTaGTATTACACTGGTAGAAGC +
Preference number: 5 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIPKDNG*YYTGRS
Trigger: GCTTCTACCAGTGTAATACAAGCCATTGTCTTTTGG...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATACACAAATGCAATGAATaGGATAGCCATTGGCACATC +
Preference number: 5 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIHKCNE*DSHWHI
Trigger: GATGTGCCAATGGCTATCCAATTCATTGCATTTGTG...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAACCTTGTCGTACCTGTaGAGTGACAGGCTTATTAAA +
Preference number: 5 (lower is better)
Translates to: SYLTTGDRKEDHEGALKITLSYL*SDRLIK
Trigger: TTTAATAAGCCTGTCACTCAACAGGTACGACAAGGT...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGAAAGCAAAGCTGAGTTaGAGACCCAGGTGGGTTCCC +
Preference number: 5 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLKAKLS*RPRWVP
Trigger: GGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTT...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATATCAAATAGGCTGATGTaGGTTAAATTGTCACTTGCC +
Preference number: 5 (lower is better)
Translates to: SYLTTGDRKEDHEGALKISNRLM*VKLSLA
Trigger: GGCAAGTGACAATTTAACCAACATCAGCCTATTTGA...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATAATCTTCTTCGGTCACTaGATTTTTCAAGCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIIFFGH*IFQAVF
Trigger: AAACACTGCTTGAAAAATCAAGTGACCGAAGAAGAT...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGATATCTTGCTACAACTaGAGGGCAGATGATATCATC +
Preference number: 5 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRISCYN*RADDII
Trigger: GATGATATCATCTGCCCTCAAGTTGTAGCAAGATAT...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATAATTCGGATTTTGAGATaGACAACACACGATACACAT +
Preference number: 5 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIIRILR*TTHDTH
Trigger: ATGTGTATCGTGTGTTGTCAATCTCAAAATCCGAAT...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGTCTCTGCATCTCATCTaGTCCCATCTGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLSLHLI*SHLSKV
Trigger: CACCTTGGACAGATGGGACAAGATGAGATGCAGAGA...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AGTCCTGCAGTTAACCCTGAGGAACCTGCCTCTACAAAAAGTTGGTCCTCCATAATTTCCCAACAGAATTaGGGCCACCAAATATTTTCA +
Preference number: 5 (lower is better)
Translates to: SPAVNPEEPASTKSWSSIISQQN*GHQIFS
Trigger: TGAAAATATTTGGTGGCCCAAATTCTGTTGGGAAAT...TATGGAGGACCAACTTTTTGTAGAGGCAGGTTCCTCAGGGTTAACTGCAGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGTCAGAAGACCTAACCTaGTCGTACCTGTTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLSEDLT*SYLLSD
Trigger: GTCACTCAACAGGTACGACAAGGTTAGGTCTTCTGA...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCTGATGGAGCTGTGCTaGGCATGTCCATTGCTAGCA +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVLMELC*ACPLLA
Trigger: TGCTAGCAATGGACATGCCAAGCACAGCTCCATCAG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAGATCCTATTACACAGTaGCTAATTAACCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIDPITQ*LINLQF
Trigger: GAACTGAAGGTTAATTAGCAACTGTGTAATAGGATC...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGCTGCACAGTTCAAACTaGTGTTGCTCAAGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLLHSSN*CCSRVN
Trigger: GTTGACCCTTGAGCAACACAAGTTTGAACTGTGCAG...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CAAGATCATAAAGCAAAGCTGAGTTTGAGACCCAGGTGGGTTCCCAAAACTAGGCAGATGATTCAACTTTaGGTGAGGTTTCTGTATCTA +
Preference number: 5 (lower is better)
Translates to: QDHKAKLSLRPRWVPKTRQMIQL*VRFLYL
Trigger: TAGATACAGAAACCTCACCAAAAGTTGAATCATCTG...CCTAGTTTTGGGAACCCACCTGGGTCTCAAACTCAGCTTTGCTTTATGATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp TCGTATCTTACGACTGGGGACAGGAAAGAAGACCATGAAGGTGCTCTCAAGATAGTCAATTCCAACCATTaGGTAATTTACAATGCAGGT +
Preference number: 5 (lower is better)
Translates to: SYLTTGDRKEDHEGALKIVNSNH*VIYNAG
Trigger: ACCTGCATTGTAAATTACCAAATGGTTGGAATTGAC...TATCTTGAGAGCACCTTCATGGTCTTCTTTCCTGTCCCCAGTCGTAAGATACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGGCTTTTACCATGTATaGCAGGTTCTCTGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLGFYHV*QVLCGQ
Trigger: CTGGCCACAGAGAACCTGCAATACATGGTAAAAGCC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACAGCTATAGGCTTCCCTTaGTGCTATATTCCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: VLHILRFCIPQILYFRSTAIGFP*CYIPAK
Trigger: CTTGGCAGGAATATAGCACAAAGGGAAGCCTATAGC...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTTCTCTGCATCTCATCTaGTCCCATCTGTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVSLHLI*SHLSKV
Trigger: CACCTTGGACAGATGGGACAAGATGAGATGCAGAGA...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATCACCAACAGGAATCTTaGGGGTCTAAACCGCAAACA +
Preference number: 5 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHHQQES*GSKPQT
Trigger: TGTTTGCGGTTTAGACCCCAAAGATTCCTGTTGGTG...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CAA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAAATACCTTCCTTTGACTaGTTTCCAAGGATGAGGGCC +
Preference number: 5 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQIPSFD*FPRMRA
Trigger: GGCCCTCATCCTTGGAAACAAGTCAAAGGAAGGTAT...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CAA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAACAGAATTTCACCATGTaGTCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQQNFTM*SRLVSN
Trigger: GTTTGAGACCAGCCTGGACAACATGGTGAAATTCTG...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS CCA 90 bp GCATGTGGCAGCAGTAAACAATCTATGATCCGGAATAGTAATTTTTaGGCTTTAGAAGTGGCAAAGATTTGTGCCCATGATTTCACAAGA +
Preference number: 5 (lower is better)
Translates to: ACGSSKQSMIRNSNF*ALEVAKICAHDFTR
Trigger: TCTTGTGAAATCATGGGCACAAATCTTTGCCACTTCTAAAGCCCAAAAATTACTATTCCGGATCATAGATTGTTTACTGCTGCCACATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS-3UTR CAA 90 bp TCCCAAATGAGAACATTAGTTATCTGGTTCTACTATACTGTGGTCAGTTCTCATCACTGCTGCCTAATATaGTCTGCTTTGCAGTGTAGA +
Preference number: 5 (lower is better)
Translates to: SQMRTLVIWFYYTVVSSHHCCLI*SALQCR
Trigger: TCTACACTGCAAAGCAGACAATATTAGGCAGCAGTG...ATGAGAACTGACCACAGTATAGTAGAACCAGATAACTAATGTTCTCATTTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTCAGAAGACCTAACCTaGTCGTACCTGTTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLSEDLT*SYLLSD
Trigger: GTCACTCAACAGGTACGACAAGGTTAGGTCTTCTGA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTACACCAAGAATTCCTTaGCTTTCTCCCGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVTPRIP*LSPGKH
Trigger: GTGCTTTCCGGGAGAAAGCAAAGGAATTCTTGGTGT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGCTATAGGCTTCCCTTaGTGCTATATTCCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLAIGFP*CYIPAK
Trigger: CTTGGCAGGAATATAGCACAAAGGGAAGCCTATAGC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGTGCCTCTACAAAAAGTaGGTCCTCCATATACTCAGA +
Preference number: 5 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLCLYKK*VLHILR
Trigger: TCTGAGTATATGGAGGACCAACTTTTTGTAGAGGCA...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATATACAGTGGTCATTTTaGGTCTGGGGACTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYIQWSF*VWGLVP
Trigger: TGGAACCAGTCCCCAGACCAAAAATGACCACTGTAT...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCACACCAACAGGAATCTTaGGGGTCTAAACCGCAAACA +
Preference number: 5 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSHQQES*GSKPQT
Trigger: TGTTTGCGGTTTAGACCCCAAAGATTCCTGTTGGTG...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS TCA 90 bp TGTATATGTGGTCTGTCACTGACTAAAACTTTGTTACACAGTGTATaGCCCTACTATTCAGCCTTGAGAAGATGGAAATGCTGTCATTTG +
Preference number: 5 (lower is better)
Translates to: CICGLSLTKTLLHSV*PYYSALRRWKCCHL
Trigger: CAAATGACAGCATTTCCATCTTCTCAAGGCTGAATAGTAGGGTCATACACTGTGTAACAAAGTTTTAGTCAGTGACAGACCACATATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508820.1
ENST00000511335.5
CDS CCA 90 bp CTATTCAGCCTTGAGAAGATGGAAATGCTGTCATTTGCAACAATATaGATGAACCTGGAGGACATTAAATTAAGTGAAATAAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LFSLEKMEMLSFATI*MNLEDIKLSEISQA
Trigger: TGCCTGGCTTATTTCACTTAATTTAATGTCCTCCAGGTTCATCCATATTGTTGCAAATGACAGCATTTCCATCTTCTCAAGGCTGAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508820.1
ENST00000511335.5
CDS-3UTR CAA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATTTTCCTCCTCCTCTGTaGTCAACAGCACAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYFPPPL*STAQEK
Trigger: CTTTTCTTGTGCTGTTGACAACAGAGGAGGAGGAAA...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTTTTCCTCCTCCTCTGTaGTCAACAGCACAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVFPPPL*STAQEK
Trigger: CTTTTCTTGTGCTGTTGACAACAGAGGAGGAGGAAA...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCACTGCTGCCTAATATaGTCTGCTTTGCAGTGTAGA +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLHCCLI*SALQCR
Trigger: TCTACACTGCAAAGCAGACAATATTAGGCAGCAGTG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGTTACAAAAGCAGGCTaGAGGAAATTCAGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLVTKAG*RKFRRS
Trigger: AGACCTCCTGAATTTCCTCAAGCCTGCTTTTGTAAC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGTCCACATTGTCCCTTaGAAGTTCCTGACACAATTG +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLVHIVP*KFLTQL
Trigger: CAATTGTGTCAGGAACTTCAAAGGGACAATGTGGAC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAGTTTCCTTGAAGAGTaGGAGGATGAAGGCCAGAAT +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVSFLEE*EDEGQN
Trigger: ATTCTGGCCTTCATCCTCCAACTCTTCAAGGAAACT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTACCTGCTGGTCCAATGTaGCTACTGTTTCTAAAATGC +
Preference number: 5 (lower is better)
Translates to: KVECSFVKSSKDPITQLLPAGPM*LLFLKC
Trigger: GCATTTTAGAAACAGTAGCAACATTGGACCAGCAGG...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTCCATGCTTCCTTCCTaGCCATGGAAACGTTCTAAT +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLSMLPS*PWKRSN
Trigger: ATTAGAACGTTTCCATGGCAAGGAAGGAAGCATGGA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS CCA 90 bp AGTGGTGACAAGAAAACCCTTGCACAGTTTGGTGAGAATGTAAATTaGTACAGCCATCATGTAATACAGTATGCAAATTCCTCACAAAAT +
Preference number: 5 (lower is better)
Translates to: SGDKKTLAQFGENVN*YSHHVIQYANSSQN
Trigger: ATTTTGTGAGGAATTTGCATACTGTATTACATGATGGCTGTACCAATTTACATTCTCACCAAACTGTGCAAGGGTTTTCTTGTCACCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508820.1
ENST00000511335.5
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCATGTTCTGAAACACTaGGGGTTCGTCGTATCATTA +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVHVLKH*GFVVSL
Trigger: TAATGATACGACGAACCCCAAGTGTTTCAGAACATG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTACATGTTCTGAAACACTaGGGGTTCGTCGTATCATTA +
Preference number: 5 (lower is better)
Translates to: KVECSFVKSSKDPITQLLHVLKH*GFVVSL
Trigger: TAATGATACGACGAACCCCAAGTGTTTCAGAACATG...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGCATGTTCTGAAACACTaGGGGTTCGTCGTATCATTA +
Preference number: 5 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLHVLKH*GFVVSL
Trigger: TAATGATACGACGAACCCCAAGTGTTTCAGAACATG...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR CAA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACAAACAAGGTTTCCAAGTaGTACAGTTGTTGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: VLHILRFCIPQILYFRSTNKVSK*YSCCLN
Trigger: ATTCAGGCAACAACTGTACAACTTGGAAACCTTGTT...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTACTTTGCAGTGTAGAGTaGATACCTTCCCAAAATCAC +
Preference number: 5 (lower is better)
Translates to: KVECSFVKSSKDPITQLLLCSVE*IPSQNH
Trigger: GTGATTTTGGGAAGGTATCAACTCTACACTGCAAAG...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCACTTTGCAGTGTAGAGTaGATACCTTCCCAAAATCAC +
Preference number: 5 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSLCSVE*IPSQNH
Trigger: GTGATTTTGGGAAGGTATCAACTCTACACTGCAAAG...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CAA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAACTAATATTGTCTGCTTaGCAGTGTAGAGTTGATACC +
Preference number: 5 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQLILSA*QCRVDT
Trigger: GGTATCAACTCTACACTGCAAAGCAGACAATATTAG...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CAA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGCTGATGTTGGTTAAATaGTCACTTGCCAGATTCATA +
Preference number: 5 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLLMLVK*SLARFI
Trigger: TATGAATCTGGCAAGTGACAATTTAACCAACATCAG...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAACCTTGTCGTACCTGTaGAGTGACAGGCTTATTAAA +
Preference number: 5 (lower is better)
Translates to: KVECSFVKSSKDPITQLLTLSYL*SDRLIK
Trigger: TTTAATAAGCCTGTCACTCAACAGGTACGACAAGGT...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGACCTTGTCGTACCTGTaGAGTGACAGGCTTATTAAA +
Preference number: 5 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLTLSYL*SDRLIK
Trigger: TTTAATAAGCCTGTCACTCAACAGGTACGACAAGGT...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CAA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATGGTCTAAAACATGACTaGCAACATCTTCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYGLKHD*QHLLPL
Trigger: CAGAGGTAGAAGATGTTGCAAGTCATGTTTTAGACC...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAGGTCTAAAACATGACTaGCAACATCTTCTACCTCTG +
Preference number: 5 (lower is better)
Translates to: KVECSFVKSSKDPITQLLGLKHD*QHLLPL
Trigger: CAGAGGTAGAAGATGTTGCAAGTCATGTTTTAGACC...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACATTCCTGACACAATTGTaGATGCATACTCCTGATTCT +
Preference number: 5 (lower is better)
Translates to: VLHILRFCIPQILYFRSTFLTQL*MHTPDS
Trigger: AGAATCAGGAGTATGCATCAACAATTGTGTCAGGAA...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp GTCCTCCATATACTCAGATTTTGCATCCCACAAATACTGTATTTTAGATCCACAAAGTTCCTGACACAATaGTTGATGCATACTCCTGAT +
Preference number: 5 (lower is better)
Translates to: VLHILRFCIPQILYFRSTKFLTQ*LMHTPD
Trigger: ATCAGGAGTATGCATCAACAATTGTGTCAGGAACTT...TGTGGATCTAAAATACAGTATTTGTGGGATGCAAAATCTGAGTATATGGAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp AGTCTCCAGACTGAAGGGTTTGAACATCACCTTATAAACAATGGTAAGTTACTGAGTAATCTTGTCAGTTaGACCAACTGTTTCATGTAC +
Preference number: 5 (lower is better)
Translates to: SLQTEGFEHHLINNGKLLSNLVS*TNCFMY
Trigger: GTACATGAAACAGTTGGTCAAACTGACAAGATTACT...CAGTAACTTACCATTGTTTATAAGGTGATGTTCAAACCCTTCAGTCTGGAGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS TCA 90 bp CATAAGGGTTCCGAGACAAACCATTTACTTCTGTGGTCTAGAAGATaGATAAGTAGAACCCATAATTCTTTAATGCATAAACATGGACAC +
Preference number: 5 (lower is better)
Translates to: HKGSETNHLLLWSRR*ISRTHNSLMHKHGH
Trigger: GTGTCCATGTTTATGCATTAAAGAATTATGGGTTCTACTTATTCATCTTCTAGACCACAGAAGTAAATGGTTTGTCTCGGAACCCTTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTAACAAGGTTTCCAAGTaGTACAGTTGTTGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLNKVSK*YSCCLN
Trigger: ATTCAGGCAACAACTGTACAACTTGGAAACCTTGTT...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp TCACAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGAACAAGGTTTCCAAGTaGTACAGTTGTTGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: SQRRVSQCSSNRLMLVKLNKVSK*YSCCLN
Trigger: ATTCAGGCAACAACTGTACAACTTGGAAACCTTGTT...CAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR CAA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGAACAAGGTTTCCAAGTaGTACAGTTGTTGCCTGAAT +
Preference number: 5 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKNKVSK*YSCCLN
Trigger: ATTCAGGCAACAACTGTACAACTTGGAAACCTTGTT...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTCTAATATTGTCTGCTTaGCAGTGTAGAGTTGATACC +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVLILSA*QCRVDT
Trigger: GGTATCAACTCTACACTGCAAAGCAGACAATATTAG...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTCAAATAGGCTGATGTaGGTTAAATTGTCACTTGCC +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLSNRLM*VKLSLA
Trigger: GGCAAGTGACAATTTAACCAACATCAGCCTATTTGA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCATCAAATAGGCTGATGTaGGTTAAATTGTCACTTGCC +
Preference number: 5 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSSNRLM*VKLSLA
Trigger: GGCAAGTGACAATTTAACCAACATCAGCCTATTTGA...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR CAA 90 bp ATATCCAAGTGGAGATGTAATAAATGCCATGACGGTGGAAAAAGCACTATTCAAATCTTCTTCGGTCACTaGATTTTTCAAGCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: ISKWRCNKCHDGGKSTIQIFFGH*IFQAVF
Trigger: AAACACTGCTTGAAAAATCAAGTGACCGAAGAAGAT...TTGAATAGTGCTTTTTCCACCGTCATGGCATTTATTACATCTCCACTTGGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTTTCCTGACACAATTGTaGATGCATACTCCTGATTCT +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVFLTQL*MHTPDS
Trigger: AGAATCAGGAGTATGCATCAACAATTGTGTCAGGAA...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAAAGTTCCTGACACAATaGTTGATGCATACTCCTGAT +
Preference number: 5 (lower is better)
Translates to: KVECSFVKSSKDPITQLLKFLTQ*LMHTPD
Trigger: ATCAGGAGTATGCATCAACAATTGTGTCAGGAACTT...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTATATCTTGCTACAACTaGAGGGCAGATGATATCATC +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVISCYN*RADDII
Trigger: GATGATATCATCTGCCCTCAAGTTGTAGCAAGATAT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCATGACTTAAATATCTaGCTACAACTTGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLHDLNI*LQLEGR
Trigger: TCTGCCCTCAAGTTGTAGCAAGATATTTAAGTCATG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTACATGACTTAAATATCTaGCTACAACTTGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: KVECSFVKSSKDPITQLLHDLNI*LQLEGR
Trigger: TCTGCCCTCAAGTTGTAGCAAGATATTTAAGTCATG...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATATAGGCATTCGGATTTaGAGATTGACAACACACGAT +
Preference number: 5 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYIGIRI*RLTTHD
Trigger: ATCGTGTGTTGTCAATCTCAAAATCCGAATGCCTAT...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTATAGGCATTCGGATTTaGAGATTGACAACACACGAT +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLIGIRI*RLTTHD
Trigger: ATCGTGTGTTGTCAATCTCAAAATCCGAATGCCTAT...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTACGTACATTATCCCATaGATTCTCACAACAACACTG +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLTYIIP*ILTTTL
Trigger: CAGTGTTGTTGTGAGAATCAATGGGATAATGTACGT...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTGGCATACTATACTCTaGCCTGACAGGCAATATTTT +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLWHTIL*PDRQYF
Trigger: AAAATATTGCCTGTCAGGCAAGAGTATAGTATGCCA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCAGGGAAAACCTCTGTCTaGTTCATTAGAGGATTCTTT +
Preference number: 5 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSGKTSV*FIRGFF
Trigger: AAAGAATCCTCTAATGAACAAGACAGAGGTTTTCCC...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTCTGATGTTGGTTAAATaGTCACTTGCCAGATTCATA +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLLMLVK*SLARFI
Trigger: TATGAATCTGGCAAGTGACAATTTAACCAACATCAG...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp CAAAGGAGAGTTTCACAATGTTCTTCAAATAGGCTGATGTTGGTTAAATTGTCACTGATGTTGGTTAAATaGTCACTTGCCAGATTCATA +
Preference number: 5 (lower is better)
Translates to: QRRVSQCSSNRLMLVKLSLMLVK*SLARFI
Trigger: TATGAATCTGGCAAGTGACAATTTAACCAACATCAG...TGACAATTTAACCAACATCAGCCTATTTGAAGAACATTGTGAAACTCTCCTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496119.2
ENST00000509383.5
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTATCTTCTTCGGTCACTaGATTTTTCAAGCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVIFFGH*IFQAVF
Trigger: AAACACTGCTTGAAAAATCAAGTGACCGAAGAAGAT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp CAAATGCCTAATAAAGTCCTTTCATCACTCTGTTGTCCTTCAGTTGTCTTTTATGGTCTCAAACACTTCTaGAACACCATCAATGTATAT +
Preference number: 5 (lower is better)
Translates to: QMPNKVLSSLCCPSVVFYGLKHF*NTINVY
Trigger: ATATACATTGATGGTGTTCAAGAAGTGTTTGAGACC...ATAAAAGACAACTGAAGGACAACAGAGTGATGAAAGGACTTTATTAGGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGGTCTCAAACACTTCTaGAACACCATCAATGTATAT +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVGLKHF*NTINVY
Trigger: ATATACATTGATGGTGTTCAAGAAGTGTTTGAGACC...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp CATCAAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTAGTAATCTTGTCAGTTaGACCAACTGTTTCATGTAC +
Preference number: 5 (lower is better)
Translates to: HQGRMQFCKKFQGSYYTVSNLVS*TNCFMY
Trigger: GTACATGAAACAGTTGGTCAAACTGACAAGATTACT...AACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTTGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTATTCGGATTTTGAGATaGACAACACACGATACACAT +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLIRILR*TTHDTH
Trigger: ATGTGTATCGTGTGTTGTCAATCTCAAAATCCGAAT...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTGATCCTATTACACAGTaGCTAATTAACCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLDPITQ*LINLQF
Trigger: GAACTGAAGGTTAATTAGCAACTGTGTAATAGGATC...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000369251.6
CDS-3UTR CAA 90 bp AAGGTAGAATGCAGTTTTGTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTACCATATACTCAGATTTaGCATCCCACAAATACTGTA +
Preference number: 5 (lower is better)
Translates to: KVECSFVKSSKDPITQLLPYTQI*HPTNTV
Trigger: TACAGTATTTGTGGGATGCAAAATCTGAGTATATGG...TAGCAACTGTGTAATAGGATCCTTGGAACTTTTTACAAAACTGCATTCTACCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp GTAAAAAGTTCCAAGGATCCTATTACACAGTTGCTAATTAACCTTCAGTTCCTTTCTGTTGTCCTTCAGTaGTCTTTTATACTCTATCTG +
Preference number: 5 (lower is better)
Translates to: VKSSKDPITQLLINLQFLSVVLQ*SFILYL
Trigger: CAGATAGAGTATAAAAGACAACTGAAGGACAACAGA...AAGGAACTGAAGGTTAATTAGCAACTGTGTAATAGGATCCTTGGAACTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS-3UTR CAA 90 bp TATAACTACTGCTGGATTTATATAGTTCCTGATCTTGTTTATCGCAACAGCAAGCTACCAACGTACAACTaGAAGATGTTTGTTTCTATC +
Preference number: 5 (lower is better)
Translates to: YNYCWIYIVPDLVYRNSKLPTYN*KMFVSI
Trigger: GATAGAAACAAACATCTTCAAGTTGTACGTTGGTAG...CTTGCTGTTGCGATAAACAAGATCAGGAACTATATAAATCCAGCAGTAGTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509383.5
CDS GCA 72 bp GGAGAAGGCGGGGTGCCGGTATCCCGCGTACCCGGCTaGAGCAAGGACCCGGGGCGTCGGTTACCCGCGGTG +
Preference number: 6 (lower is better)
Translates to: GEGGVPVSRVPG*SKDPGRRLPAV
Trigger: CACCGCGGGTAACCGACGCCCCGGGTCCTTGCTGCAGCCGGGTACGCGGGATACCGGCACCCCGCCTTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS GCA 72 bp CCCACGCCTGGCAGCACTCGGGCGGAGAAGGCGGGGTaGCGGTATCCCGCGTACCCGGCTGCAGCAAGGACC +
Preference number: 6 (lower is better)
Translates to: PTPGSTRAEKAG*RYPAYPAAART
Trigger: GGTCCTTGCTGCAGCCGGGTACGCGGGATACCGGCACCCCGCCTTCTCCGCCCGAGTGCTGCCAGGCGTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275053.8
CDS GCA 72 bp GCTGCAGCAAGGACCCGGGGCGTCGGTTACCCGCGGTaGCTGTCGTACCCGCTCACATTTCCAGCTCCCGAA +
Preference number: 6 (lower is better)
Translates to: AAARTRGVGYPR*LSYPLTFPAPE
Trigger: TTCGGGAGCTGGAAATGTGAGCGGGTACGACAGGCACCGCGGGTAACCGACGCCCCGGGTCCTTGCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275053.8
ENST00000509383.5
CDS CAA 90 bp CTCCCGAAACCTGCCTCCTGTGACCCAGACCACCAACAGGAATCTTaGGGGTCTAAACCGCAAACAGGCGAAATTCCCGCCACCGCGCGC +
Preference number: 6 (lower is better)
Translates to: LPKPASCDPDHQQES*GSKPQTGEIPATAR
Trigger: GCGCGCGGTGGCGGGAATTTCGCCTGTTTGCGGTTTAGACCCCAAAGATTCCTGTTGGTGGTCTGGGTCACAGGAGGCAGGTTTCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000496119.2
ENST00000508820.1
ENST00000683635.1
CDS CAA 72 bp CCTGCCTCCTGTGACCCAGACCACCAACAGGAATCTTaGGGGTCTAAACCGCAAACAGGCGAAATTCCCGCC +
Preference number: 6 (lower is better)
Translates to: PASCDPDHQQES*GSKPQTGEIPA
Trigger: GGCGGGAATTTCGCCTGTTTGCGGTTTAGACCCCAAAGATTCCTGTTGGTGGTCTGGGTCACAGGAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000496119.2
ENST00000508820.1
ENST00000683635.1
CDS CCA 72 bp CTGCCTCCTGTGACCCAGACCACCAACAGGAATCTTTaGGGTCTAAACCGCAAACAGGCGAAATTCCCGCCA +
Preference number: 6 (lower is better)
Translates to: LPPVTQTTNRNL*GLNRKQAKFPP
Trigger: TGGCGGGAATTTCGCCTGTTTGCGGTTTAGACCCCAAAGATTCCTGTTGGTGGTCTGGGTCACAGGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000496119.2
ENST00000508820.1
ENST00000683635.1
CDS TCA 72 bp ACACCATTGGCTTTCCTGGTTTGCAGACCTTTGGACTaGGACTGGAAACTATACCATCAGCTCCTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: TPLAFLVCRPLD*DWKLYHQLLWV
Trigger: GACCCAGAGGAGCTGATGGTATAGTTTCCAGTCTCAGTCCAAAGGTCTGCAAACCAGGAAAGCCAATGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506256.5
ENST00000511335.5
CDS TCA 72 bp AAACACAGAAGTCAGCTGGGAGGAAGGTTCTTCTTCTaGCCCCACTTGGCAGGCTTTTACCATGTATTGCAG +
Preference number: 6 (lower is better)
Translates to: KHRSQLGGRFFF*PHLAGFYHVLQ
Trigger: CTGCAATACATGGTAAAAGCCTGCCAAGTGGGGTCAGAAGAAGAACCTTCCTCCCAGCTGACTTCTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000514790.1
ENST00000683635.1
CDS CCA 72 bp CAACACGGGTTTGAAATGCATGGGTGCGCTTATACATaGATTTTCTTCCATCTCTACCACCCCGAAGACAGC +
Preference number: 6 (lower is better)
Translates to: QHGFEMHGCAYT*IFFHLYHPEDS
Trigger: GCTGTCTTCGGGGTGGTAGAGATGGAAGAAAATCCATGTATAAGCGCACCCATGCATTTCAAACCCGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS CCA 72 bp GGCATATTTTCCAGTTACCTAAACACAGAAGTCAGCTaGGAGGAAGGTTCTTCTTCTGACCCCACTTGGCAG +
Preference number: 6 (lower is better)
Translates to: GIFSSYLNTEVS*EEGSSSDPTWQ
Trigger: CTGCCAAGTGGGGTCAGAAGAAGAACCTTCCTCCCAGCTGACTTCTGTGTTTAGGTAACTGGAAAATATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514790.1
CDS CAA 72 bp GGGTCTTCAGCTTGCCAACCTCAGATTCGGGACTTCTaGGCCTCCATAACTTTCCGAGACAAACCATTTACT +
Preference number: 6 (lower is better)
Translates to: GSSACQPQIRDF*ASITFRDKPFT
Trigger: AGTAAATGGTTTGTCTCGGAAAGTTATGGAGGCCAAGAAGTCCCGAATCTGAGGTTGGCAAGCTGAAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506256.5
CDS CAA 90 bp CAGACTTGGACTCAGACTGGAAATTACACCATTGGCTTTCCTGGTTaGCAGACCTTTGGACTGAGACTGGAAACTATACCATCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: QTWTQTGNYTIGFPG*QTFGLRLETIPSAP
Trigger: AGGAGCTGATGGTATAGTTTCCAGTCTCAGTCCAAAGGTCTGCAAACCAGGAAAGCCAATGGTGTAATTTCCAGTCTGAGTCCAAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506256.5
ENST00000511335.5
CDS TCA 72 bp GCCCTGGAGATACAAAGGAAGACTTTTCTGAATTGCTaGCAACATAGGTGCAGGCAGTTCCTTCTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: ALEIQRKTFLNC*QHRCRQFLLLL
Trigger: CAGCAAGAGAAGGAACTGCCTGCACCTATGTTGTCAGCAATTCAGAAAAGTCTTCCTTTGTATCTCCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS CCA 72 bp AAATGTCTCCACAGTGCACTGGCAACTGCAGCAAGGTaGCGCTCTTTAGCCGATAATGAAGACTGTACAAAT +
Preference number: 6 (lower is better)
Translates to: KCLHSALATAAR*RSLADNEDCTN
Trigger: ATTTGTACAGTCTTCATTATCGGCTAAAGAGCGCCACCTTGCTGCAGTTGCCAGTGCACTGTGGAGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS TCA 72 bp TGGTGCCCTTCACCACCCAATCACCAATGGGTACCATaGTTCATTTTTGCCTTCTACAGAAACTCCATGTCA +
Preference number: 6 (lower is better)
Translates to: WCPSPPNHQWVP*FIFAFYRNSMS
Trigger: TGACATGGAGTTTCTGTAGAAGGCAAAAATGAATCATGGTACCCATTGGTGATTGGGTGGTGAAGGGCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS GCA 72 bp AAAGTTTGCTATAGGCTTCCCTTTGTGCTATATTCCTaGCAAGGCCCCATTTCTGCTCTGAATCCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: KVCYRLPFVLYS*QGPISALNPSE
Trigger: CTCTGAAGGATTCAGAGCAGAAATGGGGCCTTGGCAGGAATATAGCACAAAGGGAAGCCTATAGCAAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS GCA 72 bp AACAAAAAGTCCTCCGAGGGTAGAGAAGACTCCCTGTaGTTCATACTGAAACACTGTTCTTTTCCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: NKKSSEGREDSL*FILKHCSFPAF
Trigger: GAAGGCAGGAAAAGAACAGTGTTTCAGTATGAAGCACAGGGAGTCTTCTCTACCCTCGGAGGACTTTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506256.5
ENST00000511335.5
CDS GCA 72 bp AGTTCTCTTCTCAGAGTAGTTTTTCTCAGACTGCCCTaGCTTGCTAGAAAGGCTCGTGGTAAGAGCTTTAGA +
Preference number: 6 (lower is better)
Translates to: SSLLRVVFLRLP*LARKARGKSFR
Trigger: TCTAAAGCTCTTACCACGAGCCTTTCTAGCAAGGCAGGGCAGTCTGAGAAAAACTACTCTGAGAAGAGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS CAA 90 bp CTAAGCTGTCAGTCAGGAACGTCGATGCAGCAGAACAGTTCTCCATaGTTTACTTCATGTTCTGAAACACTTGGGGTTCGTCGTATCATT +
Preference number: 6 (lower is better)
Translates to: LSCQSGTSMQQNSSP*FTSCSETLGVRRII
Trigger: AATGATACGACGAACCCCAAGTGTTTCAGAACATGAAGTAAACAATGGAGAACTGTTCTGCTGCATCGACGTTCCTGACTGACAGCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000496119.2
ENST00000508820.1
ENST00000509383.5
ENST00000683635.1
CDS TCA 72 bp TTGTGCTATATTCCTGCCAAGGCCCCATTTCTGCTCTaGATCCTTCAGAGACTGAGTAAGGGTAGAAATCAA +
Preference number: 6 (lower is better)
Translates to: LCYIPAKAPFLL*ILQRLSKGRNQ
Trigger: TTGATTTCTACCCTTACTCAGTCTCTGAAGGATTCAGAGCAGAAATGGGGCCTTGGCAGGAATATAGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS GCA 72 bp CATCTTGTCCCATCTGTCCAAGGTGAGACAAAAGTTTaGTATAGGCTTCCCTTTGTGCTATATTCCTGCCAA +
Preference number: 6 (lower is better)
Translates to: HLVPSVQGETKV*YRLPFVLYSCQ
Trigger: TTGGCAGGAATATAGCACAAAGGGAAGCCTATAGCAAACTTTTGTCTCACCTTGGACAGATGGGACAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS GCA 72 bp CTGACGTTTGAACAACACGGGTTTGAAATGCATGGGTaGGCTTATACATGGATTTTCTTCCATCTCTACCAC +
Preference number: 6 (lower is better)
Translates to: LTFEQHGFEMHG*AYTWIFFHLYH
Trigger: GTGGTAGAGATGGAAGAAAATCCATGTATAAGCGCACCCATGCATTTCAAACCCGTGTTGTTCAAACGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS CCA 72 bp AAATTACACCATTGGCTTTCCTGGTTTGCAGACCTTTaGACTGAGACTGGAAACTATACCATCAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: KLHHWLSWFADL*TETGNYTISSS
Trigger: AGAGGAGCTGATGGTATAGTTTCCAGTCTCAGTCCAAAGGTCTGCAAACCAGGAAAGCCAATGGTGTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506256.5
ENST00000511335.5
CDS CAA 72 bp ACTCAGACTGGAAATTACACCATTGGCTTTCCTGGTTaGCAGACCTTTGGACTGAGACTGGAAACTATACCA +
Preference number: 6 (lower is better)
Translates to: TQTGNYTIGFPG*QTFGLRLETIP
Trigger: TGGTATAGTTTCCAGTCTCAGTCCAAAGGTCTGCAAACCAGGAAAGCCAATGGTGTAATTTCCAGTCTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506256.5
ENST00000511335.5
CDS CAA 72 bp CACCACCCAATCACCAATGGGTACCATGATTCATTTTaGCCTTCTACAGAAACTCCATGTCATGTGGACACT +
Preference number: 6 (lower is better)
Translates to: HHPITNGYHDSF*PSTETPCHVDT
Trigger: AGTGTCCACATGACATGGAGTTTCTGTAGAAGGCAAAAATGAATCATGGTACCCATTGGTGATTGGGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS CAA 90 bp TGCAGCAGAACAGTTCTCCATTGTTTACTTCATGTTCTGAAACACTaGGGGTTCGTCGTATCATTAAGGGCTCCAAAGAGAAGGTGTGAA +
Preference number: 6 (lower is better)
Translates to: CSRTVLHCLLHVLKH*GFVVSLRAPKRRCE
Trigger: TTCACACCTTCTCTTTGGAGCCCTTAATGATACGACGAACCCCAAGTGTTTCAGAACATGAAGTAAACAATGGAGAACTGTTCTGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000496119.2
ENST00000508820.1
ENST00000509383.5
ENST00000683635.1
CDS GCA 72 bp ACCACCCAATCACCAATGGGTACCATGATTCATTTTTaGCTTCTACAGAAACTCCATGTCATGTGGACACTT +
Preference number: 6 (lower is better)
Translates to: TTQSPMGTMIHF*LLQKLHVMWTL
Trigger: AAGTGTCCACATGACATGGAGTTTCTGTAGAAGGCAAAAATGAATCATGGTACCCATTGGTGATTGGGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS TCA 72 bp TATTTTAAAAGGAGGTCAAGTCTGACCTCTAGGCCATaGAGCACTACATTAACAGCTCTGAACACTGATGGA +
Preference number: 6 (lower is better)
Translates to: YFKRRSSLTSRP*STTLTALNTDG
Trigger: TCCATCAGTGTTCAGAGCTGTTAATGTAGTGCTTCATGGCCTAGAGGTCAGACTTGACCTCCTTTTAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482634.1
CDS GCA 72 bp GAAGCTCAATACTGTCCTAAGTTCAGATTCTCGACATaGTCGCAGAAGCATACTAAATCCATCATTAAGCAG +
Preference number: 6 (lower is better)
Translates to: EAQYCPKFRFST*SQKHTKSIIKQ
Trigger: CTGCTTAATGATGGATTTAGTATGCTTCTGCGAGCATGTCGAGAATCTGAACTTAGGACAGTATTGAGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS CAA 72 bp GGAAGGATACAAGCAATAGCTGGTCTCAAACACTTCTaGAACACCATCAATGTATATGGAAAGAAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: GRIQAIAGLKHF*NTINVYGKKGP
Trigger: TGGACCCTTCTTTCCATATACATTGATGGTGTTCAAGAAGTGTTTGAGACCAGCTATTGCTTGTATCCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS CAA 90 bp TTTTTCATGGGAAGGATACAAGCAATAGCTGGTCTCAAACACTTCTaGAACACCATCAATGTATATGGAAAGAAGGGTCCAGATAGTCTG +
Preference number: 6 (lower is better)
Translates to: FFMGRIQAIAGLKHF*NTINVYGKKGPDSL
Trigger: CAGACTATCTGGACCCTTCTTTCCATATACATTGATGGTGTTCAAGAAGTGTTTGAGACCAGCTATTGCTTGTATCCTTCCCATGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS CCA 72 bp CAGTGTTGTCAGTTTCTTCTGTTTTATGGTTGTTTCTaGGGGAGAGGGTACCATCAACTAAAGTGTTATCAA +
Preference number: 6 (lower is better)
Translates to: QCCQFLLFYGCF*GRGYHQLKCYQ
Trigger: TTGATAACACTTTAGTTGATGGTACCCTCTCCCCCAGAAACAACCATAAAACAGAAGAAACTGACAACACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS CAA 72 bp AGAAATAGTACACACTGCTGCCTAATATTGTCTGCTTaGCAGTGTAGAGTTGATACCTTCCCTGAAACCAAA +
Preference number: 6 (lower is better)
Translates to: RNSTHCCLILSA*QCRVDTFPETK
Trigger: TTTGGTTTCAGGGAAGGTATCAACTCTACACTGCAAAGCAGACAATATTAGGCAGCAGTGTGTACTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS CAA 72 bp CTAGGGATTGCATTTATATGTACAGTTATTTCCTCCTaGCCTACCTTCCATCTCAACCATTTTCTCACTCTC +
Preference number: 6 (lower is better)
Translates to: LGIAFICTVISS*PTFHLNHFLTL
Trigger: GAGAGTGAGAAAATGGTTGAGATGGAAGGTAGGCAAGGAGGAAATAACTGTACATATAAATGCAATCCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS CAA 72 bp AACAGTTTTAGTAAGACTTGTCTTCGGGTGGATTGCTaGGGGTTAATCTTTCAAATTATCCAGCAGACCCTT +
Preference number: 6 (lower is better)
Translates to: NSFSKTCLRVDC*GLIFQIIQQTL
Trigger: AAGGGTCTGCTGGATAATTTGAAAGATTAACCCCAAGCAATCCACCCGAAGACAAGTCTTACTAAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS TCA 72 bp TTTTTGGGCTTTAGAAGTGGCAAAGATTTGTGCCCATaGTTTCACAAGAATTCCCATCATTCCATAAGTCAG +
Preference number: 6 (lower is better)
Translates to: FLGFRSGKDLCP*FHKNSHHSISQ
Trigger: CTGACTTATGGAATGATGGGAATTCTTGTGAAATCATGGGCACAAATCTTTGCCACTTCTAAAGCCCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS TCA 72 bp CTTTGTTACACAGTGTATGACCCTACTATTCAGCCTTaGGAAGATGGAAATGCTGTCATTTGCAACAATATG +
Preference number: 6 (lower is better)
Translates to: LCYTVYDPTIQP*EDGNAVICNNM
Trigger: CATATTGTTGCAAATGACAGCATTTCCATCTTCTCAAGGCTGAATAGTAGGGTCATACACTGTGTAACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508820.1
ENST00000511335.5
CDS CAA 72 bp AGAAATAGTACACACTGCTGCCTAATATTGTCTGCTTaGCAGTGTAGAGTTGATACCTTCCCAAAATCACAA +
Preference number: 6 (lower is better)
Translates to: RNSTHCCLILSA*QCRVDTFPKSQ
Trigger: TTGTGATTTTGGGAAGGTATCAACTCTACACTGCAAAGCAGACAATATTAGGCAGCAGTGTGTACTATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000508820.1
ENST00000508976.5
ENST00000509383.5
ENST00000510018.5
ENST00000683635.1
CDS TCA 72 bp TATTCAACCAGTTCCAAAATGACTTGTCGTACCTGTTaGGTGACAGGCTTATTAAATCACAAAGGAGAGTTT +
Preference number: 6 (lower is better)
Translates to: YSTSSKMTCRTC*VTGLLNHKGEF
Trigger: AAACTCTCCTTTGTGATTTAATAAGCCTGTCACTCAACAGGTACGACAAGTCATTTTGGAACTGGTTGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510018.5
CDS CCA 72 bp AGCAGTAAACAATCTATGATCCGGAATAGTAATTTTTaGGCTTTAGAAGTGGCAAAGATTTGTGCCCATGAT +
Preference number: 6 (lower is better)
Translates to: SSKQSMIRNSNF*ALEVAKICAHD
Trigger: ATCATGGGCACAAATCTTTGCCACTTCTAAAGCCCAAAAATTACTATTCCGGATCATAGATTGTTTACTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275053.8
ENST00000369251.6
ENST00000683635.1
CDS CAA 90 bp AAACTAATTCAATCTACAGTGTTGTCAGTTTCTTCTGTTTTATGGTaGTTTCTGGGGGAGAGGGTACCATCAACTAAAGTGTTATCAAAT +
Preference number: 6 (lower is better)
Translates to: KLIQSTVLSVSSVLW*FLGERVPSTKVLSN
Trigger: ATTTGATAACACTTTAGTTGATGGTACCCTCTCCCCCAGAAACAACCATAAAACAGAAGAAACTGACAACACTGTAGATTGAATTAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS CAA 90 bp TTTTCTTCTCTAGGGATTGCATTTATATGTACAGTTATTTCCTCCTaGCCTACCTTCCATCTCAACCATTTTCTCACTCTCTTCATATTT +
Preference number: 6 (lower is better)
Translates to: FSSLGIAFICTVISS*PTFHLNHFLTLFIF
Trigger: AAATATGAAGAGAGTGAGAAAATGGTTGAGATGGAAGGTAGGCAAGGAGGAAATAACTGTACATATAAATGCAATCCCTAGAGAAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS TCA 72 bp AGGACATGTTCTGAGAAGCACGTCTTTAGGCTAACATaGTTTATTGTACTTAAACTTTTTCAGCCTACTACT +
Preference number: 6 (lower is better)
Translates to: RTCSEKHVFRLT*FIVLKLFQPTT
Trigger: AGTAGTAGGCTGAAAAAGTTTAAGTACAATAAATCATGTTAGCCTAAAGACGTGCTTCTCAGAACATGTCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508820.1
ENST00000511335.5
CDS GCA 72 bp AGTATGTTTAAGAGATATCTGCATTCCCATGTTCACTaGAGCATTATTTATAAGAGCCAAGACATGGAATCA +
Preference number: 6 (lower is better)
Translates to: SMFKRYLHSHVH*SIIYKSQDMES
Trigger: TGATTCCATGTCTTGGCTCTTATAAATAATGCTGCAGTGAACATGGGAATGCAGATATCTCTTAAACATACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508820.1
ENST00000511335.5
CDS TCA 72 bp TATTCAAGGTGTTTTTCTATACTCCCAGATGTAGTCTaGACAGACAAACTAATTCAATCTACAGTGTTGTCA +
Preference number: 6 (lower is better)
Translates to: YSRCFSILPDVV*TDKLIQSTVLS
Trigger: TGACAACACTGTAGATTGAATTAGTTTGTCTGTTCAGACTACATCTGGGAGTATAGAAAAACACCTTGAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS TCA 72 bp CTGTTATATTCCATTGAGTGCACCTTTCATACAGATTaGTTTAATTTTAGGGCATGTGGAACATTAACACGA +
Preference number: 6 (lower is better)
Translates to: LLYSIECTFHTD*FNFRACGTLTR
Trigger: TCGTGTTAATGTTCCACATGCCCTAAAATTAAATCAATCTGTATGAAAGGTGCACTCAATGGAATATAACAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511335.5
CDS CCA 72 bp ATACAATACATTATTAAAGAGCTGGCCTCTACTATTTaGATAGAAATTAGGCTTCCAGTGATTTCGGTAAAC +
Preference number: 6 (lower is better)
Translates to: IQYIIKELASTI*IEIRLPVISVN
Trigger: GTTTACCGAAATCACTGGAAGCCTAATTTCTATCCAAATAGTAGAGGCCAGCTCTTTAATAATGTATTGTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508820.1
ENST00000511335.5