RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMS19 (Homo sapiens)

Ensembl gene IDs: ENSG00000155229

Ensembl transcript IDs: ENST00000327238.14, ENST00000355839.10, ENST00000370782.6, ENST00000415383.5, ENST00000422685.5, ENST00000434392.5, ENST00000434538.5, ENST00000437002.5, ENST00000438925.7, ENST00000439048.1, ENST00000441194.5, ENST00000444411.5, ENST00000448660.5, ENST00000477575.1, ENST00000478452.1, ENST00000480108.1, ENST00000483626.5, ENST00000485400.1, ENST00000495415.5

Found 1005 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGAGACAAACACGCAGTCAGGGAGTGGAGGGCCGCCAGGCCCTCTaGCTCCACCCGCTCACTTGCCGTCTGGAACACCTCTCTGCGGAT +
Preference number: 1 (lower is better)
Translates to: ARQTRSQGVEGRQAL*LHPLTCRLEHLSAD
Trigger: ATCCGCAGAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAGGCAGAGGGCCTGGCGGCCCTCCACTCCCTGACTGCGTGTTTGTCTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 90 bp CTGGTGACAGAGTCACAGGCCCGGGCAGATGCACCTGCAGCTGCCTaGAACAGCTTGGCACTAGGCCACACCAGTTTCATGTCCGGTTCA +
Preference number: 1 (lower is better)
Translates to: LVTESQARADAPAAA*NSLALGHTSFMSGS
Trigger: TGAACCGGACATGAAACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGTGACTCTGTCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 90 bp ATTGCTGGTGACAGAGTCACAGGCCCGGGCAGATGCACCTGCAGCTaGCTGCAACAGCTTGGCACTAGGCCACACCAGTTTCATGTCCGG +
Preference number: 1 (lower is better)
Translates to: IAGDRVTGPGRCTCS*LQQLGTRPHQFHVR
Trigger: CCGGACATGAAACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGTGACTCTGTCACCAGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 90 bp CAGTACATTGCTGGTGACAGAGTCACAGGCCCGGGCAGATGCACCTaGAGCTGCCTGCAACAGCTTGGCACTAGGCCACACCAGTTTCAT +
Preference number: 1 (lower is better)
Translates to: QYIAGDRVTGPGRCT*SCLQQLGTRPHQFH
Trigger: ATGAAACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGTGACTCTGTCACCAGCAATGTACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 90 bp TGGAAGCCCTGGACCAAAGCAGGCACATTATCTGTGAAGAACCGCTaGCGGAACATGATCCGCACTTCGGCATGGCCAGCACGAGTCAGC +
Preference number: 1 (lower is better)
Translates to: WKPWTKAGTLSVKNR*RNMIRTSAWPARVS
Trigger: GCTGACTCGTGCTGGCCATGCCGAAGTGCGGATCATGTTCCGCCAGCGGTTCTTCACAGATAATGTGCCTGCTTTGGTCCAGGGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 90 bp GTCTCCTTGACGATGCTGGGATGTGTTGATACAGCTGACAAGGCTTaGAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATCTCCG +
Preference number: 1 (lower is better)
Translates to: VSLTMLGCVDTADKA*RQHRCREHWVGSSP
Trigger: CGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGTATCAACACATCCCAGCATCGTCAAGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR TCA 90 bp TCTGGCTGGGCACCCAAGACTGTCAGTGTACGGATGCCAACAAGCTaGAGCTGGGTGCTGGGGTCTGTTAGAGCCATGAATACCAGTGAG +
Preference number: 1 (lower is better)
Translates to: SGWAPKTVSVRMPTS*SWVLGSVRAMNTSE
Trigger: CTCACTGGTATTCATGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAGTCTTGGGTGCCCAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
3UTR CCA 90 bp ACACTGCTTCCTTGCGCACCAGTCTCTTCTTGTCATCCAGGGGTTTaGCTAAGGCCCGAATCACCTGTGGTTTGTACGGCAGCAGCACAG +
Preference number: 1 (lower is better)
Translates to: TLLPCAPVSSCHPGV*LRPESPVVCTAAAQ
Trigger: CTGTGCTGCTGCCGTACAAACCACAGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 90 bp GCTGGAATCTGCTCGGGAAGCTGTTTTCAGGCAGAAAGGACACGTTaGCATCCAAGAAGAGGGGCACAATGTGTGTCACACTCTGGGCAG +
Preference number: 1 (lower is better)
Translates to: AGICSGSCFQAERTR*HPRRGAQCVSHSGQ
Trigger: CTGCCCAGAGTGTGACACACATTGTGCCCCTCTTCTTGGATGGCAACGTGTCCTTTCTGCCTGAAAACAGCTTCCCGAGCAGATTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 90 bp GATACAGCTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTaGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGC +
Preference number: 1 (lower is better)
Translates to: DTADKACRQHRCREH*VGSSPLVKFDSPTR
Trigger: GCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
3UTR CCA 90 bp TTATCTGTGAAGAACCGCTGGCGGAACATGATCCGCACTTCGGCATaGCCAGCACGAGTCAGCACATCAGTGCAGTCAGACATGAGCAGA +
Preference number: 1 (lower is better)
Translates to: LSVKNRWRNMIRTSA*PARVSTSVQSDMSR
Trigger: TCTGCTCATGTCTGACTGCACTGATGTGCTGACTCGTGCTGGCCATGCCGAAGTGCGGATCATGTTCCGCCAGCGGTTCTTCACAGATAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR TCA 90 bp TGTTCACTTGCCAGAGATGCTGCAGCAGCAGAGGCAGTGTCTCCTTaGCGATGCTGGGATGTGTTGATACAGCTGACAAGGCTTGCAGAC +
Preference number: 1 (lower is better)
Translates to: CSLARDAAAAEAVSP*RCWDVLIQLTRLAD
Trigger: GTCTGCAAGCCTTGTCAGCTGTATCAACACATCCCAGCATCGTCAAGGAGACACTGCCTCTGCTGCTGCAGCATCTCTGGCAAGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 90 bp CAGGGCCACACACAGGCTAAGTGCCTTCAAACCCTGCAGGACAGATaGGATCACAAGATGATGGTCCTTCAGCCGGTTCTCATAGAACAG +
Preference number: 1 (lower is better)
Translates to: QGHTQAKCLQTLQDR*DHKMMVLQPVLIEQ
Trigger: CTGTTCTATGAGAACCGGCTGAAGGACCATCATCTTGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
3UTR GCA 90 bp CTGGGATGTGTTGATACAGCTGACAAGGCTTGCAGACAGCACAGATaGCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGAC +
Preference number: 1 (lower is better)
Translates to: LGCVDTADKACRQHR*REHWVGSSPLVKFD
Trigger: GTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGTATCAACACATCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 90 bp CTGGATTGTGCAACCATATTCCCTCTGTTCACTTGCCAGAGATGCTaGAGCAGCAGAGGCAGTGTCTCCTTGACGATGCTGGGATGTGTT +
Preference number: 1 (lower is better)
Translates to: LDCATIFPLFTCQRC*SSRGSVSLTMLGCV
Trigger: AACACATCCCAGCATCGTCAAGGAGACACTGCCTCTGCTGCTGCAGCATCTCTGGCAAGTGAACAGAGGGAATATGGTTGCACAATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 90 bp CCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTaGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCC +
Preference number: 1 (lower is better)
Translates to: PSICAVSVGKAVRDQ*FPCFGEDGSTVSNP
Trigger: GGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR GCA 90 bp TGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAGAT +
Preference number: 1 (lower is better)
Translates to: CAVSVGKAVRDQWFP*FGEDGSTVSNPRLD
Trigger: ATCTAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR GCA 90 bp CTGGTGGAAATACCAGCAACTCTCAGGGTCCTGCTGACATTTTTCTaGCATCTGTCTGAGGCTCTGACAGACAGCAATAACGTCACTGGA +
Preference number: 1 (lower is better)
Translates to: LVEIPATLRVLLTFF*HLSEALTDSNNVTG
Trigger: TCCAGTGACGTTATTGCTGTCTGTCAGAGCCTCAGACAGATGGCAGAAAAATGTCAGCAGGACCCTGAGAGTTGCTGGTATTTCCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTaGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCAT +
Preference number: 1 (lower is better)
Translates to: KEIFILQQVDNICQP*SSGPHSYALTPQQH
Trigger: ATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR CCA 90 bp CATACACAGCACAGCAAGCATTCAGAGTCTGTAGAGAATCCAACTTaGCACTCAGAACCTCAGAATCCACTTTCTCAATCAACAGGGGCA +
Preference number: 1 (lower is better)
Translates to: HTQHSKHSESVENPT*HSEPQNPLSQSTGA
Trigger: TGCCCCTGTTGATTGAGAAAGTGGATTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTACAGACTCTGAATGCTTGCTGTGCTGTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR CCA 90 bp CGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATaGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCA +
Preference number: 1 (lower is better)
Translates to: RKCLTHTYFTNPLEI*TLMFFVQPCNRGLA
Trigger: TGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR CAA 90 bp GAGTCACAGGCCCGGGCAGATGCACCTGCAGCTGCCTGCAACAGCTaGGCACTAGGCCACACCAGTTTCATGTCCGGTTCACACAGGTGG +
Preference number: 2 (lower is better)
Translates to: ESQARADAPAAACNS*ALGHTSFMSGSHRW
Trigger: CCACCTGTGTGAACCGGACATGAAACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGTGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CCA 90 bp CCAGCTCCAAGTCCTCATAAGATAGGAGATCTGGCTGGGCACCCAAGACTGTCACACGCAGTCAGGGAGTaGAGGGCCGCCAGGCCCTCT +
Preference number: 2 (lower is better)
Translates to: PAPSPHKIGDLAGHPRLSHAVRE*RAARPS
Trigger: AGAGGGCCTGGCGGCCCTCCACTCCCTGACTGCGTG...TGACAGTCTTGGGTGCCCAGCCAGATCTCCTATCTTATGAGGACTTGGAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR GCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCAGGGCCACACTCATATaGACTCACCCCTCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPRATLI*THPSAA
Trigger: TGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCT...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR CAA 90 bp GGGGCAGCTGTGGCAGCAGCTCAGTTCCAAAAGCTCCCGCATGAGTaGGTTCAGCTGAGGGATTTCCACATTTCGAGGCAGGGAGCAGAC +
Preference number: 2 (lower is better)
Translates to: GAAVAAAQFQKLPHE*VQLRDFHISRQGAD
Trigger: GTCTGCTCCCTGCCTCGAAATGTGGAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGGAACTGAGCTGCTGCCACAGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR GCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPDQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR GCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGAGGGCCACACTCATATaGACTCACCCCTCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISRATLI*THPSAA
Trigger: TGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCT...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCGCTCACTTGCCGTCTaGAACACCTCTCTGCGGATA +
Preference number: 2 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISRSLAV*NTSLRI
Trigger: TATCCGCAGAGAGGTGTTCCAGACGGCAAGTGAGCG...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CAA 90 bp CACTCCCCTCTGGCTGACACTGCTTCCTTGCGCACCAGTCTCTTCTaGTCATCCAGGGGTTTGGCTAAGGCCCGAATCACCTGTGGTTTG +
Preference number: 2 (lower is better)
Translates to: HSPLADTASLRTSLF*SSRGLAKARITCGL
Trigger: CAAACCACAGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGCCAGAGGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR GCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIDQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR GCA 90 bp AGCACGAGTCAGCACATCAGTGCAGTCAGACATGAGCAGAGAGAAGCCATCAGCCCGGGCAGATGCACCTaGAGCTGCCTGCAACAGCTT +
Preference number: 2 (lower is better)
Translates to: STSQHISAVRHEQREAISPGRCT*SCLQQL
Trigger: AAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGG...GCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTGATGTGCTGACTCGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CCA 90 bp AGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGTGCCTTCAAACCACCTGTGACAAAAGCTaGATTGCTCGTGCCCGAGTT +
Preference number: 2 (lower is better)
Translates to: RNSQPWGQGHTQAKCLQTTCDKS*IARARV
Trigger: AACTCGGGCACGAGCAATCCAGCTTTTGTCACAGGT...GGTTTGAAGGCACTTAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR-3UTR CCA 90 bp AGCACGAGTCAGCACATCAGTGCAGTCAGACATGAGCAGAGAGAAGCCATCAGCAGCTTGGGTACGAGGTaGCTGCTGAAGGCCACAGGG +
Preference number: 2 (lower is better)
Translates to: STSQHISAVRHEQREAISSLGTR*LLKATG
Trigger: CCCTGTGGCCTTCAGCAGCCACCTCGTACCCAAGCT...GCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTGATGTGCTGACTCGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CAA 90 bp GACACTGCTTCCTTGCGCACCAGTCTCTTCTTGTCATCCAGGGGTTaGGCTAAGGCCCGAATCACCTGTGGTTTGTACGGCAGCAGCACA +
Preference number: 2 (lower is better)
Translates to: DTASLRTSLFLSSRG*AKARITCGLYGSST
Trigger: TGTGCTGCTGCCGTACAAACCACAGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR GCA 90 bp CAAGTAGTTTGGCTTCACATCTTGGGGAGCAGCATGGAAGCCCTGGACCAAAGCCTCCACCCGCTCACTTaGCGTCTGGAACACCTCTCT +
Preference number: 2 (lower is better)
Translates to: QVVWLHILGSSMEALDQSLHPLT*RLEHLS
Trigger: AGAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAG...GCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAACTACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR GCA 90 bp AGTAGTTTGGCTTCACATCTTGGGGAGCAGCATGGAAGCCCTGGACCAAAGCAGATCCAGCTGCTGCCCTaGAGGGTGCTTGTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: SSLASHLGEQHGSPGPKQIQLLP*RVLVEE
Trigger: CTCCTCAACAAGCACCCTGCAGGGCAGCAGCTGGAT...CTGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 2 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CCA 90 bp ACTTCCTGGAAGATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCACCTGTGACAAAAGCTaGATTGCTCGTGCCCGAGTT +
Preference number: 2 (lower is better)
Translates to: TSWKMALSTETASPGGRATCDKS*IARARV
Trigger: AACTCGGGCACGAGCAATCCAGCTTTTGTCACAGGT...GGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCATCTTCCAGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR CAA 90 bp GGCTGGAATCTGCTCGGGAAGCTGTTTTCAGGCAGAAAGGACACGTaGCCATCCAAGAAGAGGGGCACAATGTGTGTCACACTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: GWNLLGKLFSGRKDT*PSKKRGTMCVTLWA
Trigger: TGCCCAGAGTGTGACACACATTGTGCCCCTCTTCTTGGATGGCAACGTGTCCTTTCTGCCTGAAAACAGCTTCCCGAGCAGATTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAACATCTGCCAGCCCTaGTCCTCAGGGCCACACTCA +
Preference number: 2 (lower is better)
Translates to: CTAMQQRPSICAVSVGKANICQP*SSGPHS
Trigger: TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CCA 90 bp GTCAGCACATCAGTGCAGTCAGACATGAGCAGAGAGAAGCCATCAGCTGCTGCTGGAGCCATCCTGGAATaGCTGGAATCTGCTCGGGAA +
Preference number: 2 (lower is better)
Translates to: VSTSVQSDMSREKPSAAAGAILE*LESARE
Trigger: TTCCCGAGCAGATTCCAGCCATTCCAGGATGGCTCC...AGCAGCAGCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTGATGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CAA 90 bp CTGTTCACTTGCCAGAGATGCTGCAGCAGCAGAGGCAGTGTCTCCTaGACGATGCTGGGATGTGTTGATACAGCTGACAAGGCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: LFTCQRCCSSRGSVS*TMLGCVDTADKACR
Trigger: TCTGCAAGCCTTGTCAGCTGTATCAACACATCCCAGCATCGTCAAGGAGACACTGCCTCTGCTGCTGCAGCATCTCTGGCAAGTGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR GCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: LYSSAGRQHLPALVLRATDQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR GCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAGGGCCACACTCATATaGACTCACCCCTCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: CTAMQQRPSICAVSVGKARATLI*THPSAA
Trigger: TGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR GCA 90 bp GGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCAGTGCCTTCAAACCCTaGAGGACAGATGGGATCACA +
Preference number: 2 (lower is better)
Translates to: GSSPLVKFDSPTRSSSASSAFKP*RTDGIT
Trigger: TGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACT...GCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CCA 90 bp AACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCGTGTCGGTCCACCTGTaGCAGGGACTGTACATGCAC +
Preference number: 2 (lower is better)
Translates to: NRMSLQTTPPQRVPGYSPVSVHL*QGLYMH
Trigger: GTGCATGTACAGTCCCTGCCACAGGTGGACCGACAC...GGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
3UTR-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGATGGGATCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 2 (lower is better)
Translates to: CTAMQQRPSICAVSVGKADGITR*WSFSRF
Trigger: GAACCGGCTGAAGGACCATCATCTTGTGATCCCATC...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGGTTCAGAAACTTGGTaGCGAGGGTGTCCACGTGAA +
Preference number: 2 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAGSETW*RGCPRE
Trigger: TTCACGTGGACACCCTCGTCACCAAGTTTCTGAACC...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR GCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: NLYSSAGRQHLPALVLRADQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR GCA 90 bp ACCTGGATGAAGCCAAAGGTGAAGTCAGCTCCTAGGCTCTTTAGCTCTTCTTCCAGGGCCACACTCATATaGACTCACCCCTCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: TWMKPKVKSAPRLFSSSSRATLI*THPSAA
Trigger: TGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCT...GGAAGAAGAGCTAAAGAGCCTAGGAGCTGACTTCACCTTTGGCTTCATCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR GCA 90 bp ATGGTCCTTCAGCCGGTTCTCATAGAACAGTATCAGGTGTACCACTTCCTTCTCAAGCTGGATTGCTCGTaGCCGAGTTCGGGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: MVLQPVLIEQYQVYHFLLKLDCS*PSSGFW
Trigger: CCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTT...GAGAAGGAAGTGGTACACCTGATACTGTTCTATGAGAACCGGCTGAAGGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR-3UTR GCA 90 bp AGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGCACACACAGGCTAAGTaGCTTCAAACCCTGCAGGAC +
Preference number: 2 (lower is better)
Translates to: RMSLQTTPPQRVPGYSPWHTQAK*LQTLQD
Trigger: GTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG...CCAGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
3UTR-3UTR CCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 2 (lower is better)
Translates to: LYSSAGRQHLPALVLRATVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 2 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR GCA 90 bp TCCACCTGTGGCAGGGACTGTACATGCACTTCCTGGAAGATGGCTTTAAGCACAAGTGCCTTCAAACCCTaGAGGACAGATGGGATCACA +
Preference number: 2 (lower is better)
Translates to: STCGRDCTCTSWKMALSTSAFKP*RTDGIT
Trigger: TGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACT...TGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCCACAGGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
3UTR-3UTR GCA 90 bp ACCTGGATGAAGCCAAAGGTGAAGTCAGCTCCTAGGCTCTTTAGCTCTTCTTCCGGCAGGGACTGTACATaGACTTCCTGGAAGATGGCT +
Preference number: 2 (lower is better)
Translates to: TWMKPKVKSAPRLFSSSSGRDCT*TSWKMA
Trigger: AGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCC...GGAAGAAGAGCTAAAGAGCCTAGGAGCTGACTTCACCTTTGGCTTCATCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
3UTR-3UTR GCA 90 bp ACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGCAGGGACTGTACATaGACTTCCTGGAAGATGGCT +
Preference number: 2 (lower is better)
Translates to: TGCHFKQLLHKGSQAIVPGRDCT*TSWKMA
Trigger: AGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCC...AGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
3UTR-3UTR CCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 2 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR TCA 90 bp CAGATGGGATCACAAGATGATGGTCCTTCAGCCGGTTCTCATAGAACAGTATCATCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGT +
Preference number: 2 (lower is better)
Translates to: QMGSQDDGPSAGSHRTVSSRSKV*QWSSTC
Trigger: ACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGA...TGATACTGTTCTATGAGAACCGGCTGAAGGACCATCATCTTGTGATCCCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR-3UTR GCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRDQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 2 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAAACTCAGCAAATCGTaGTGTAGAAGCCAGCACAGC +
Preference number: 2 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAKLSKS*CRSQHS
Trigger: GCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR GCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACATTCTTTGTACAGCCATaGAACAGAGGCCTAGCATTT +
Preference number: 2 (lower is better)
Translates to: LYSSAGRQHLPALVLRATFFVQP*NRGLAF
Trigger: AAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR GCA 90 bp AAGGTGAAGTCAGCTCCTAGGCTCTTTAGCTCTTCTTCCCGGGTTCGCATAAAAAGTGCCTTCAAACCCTaGAGGACAGATGGGATCACA +
Preference number: 2 (lower is better)
Translates to: KVKSAPRLFSSSSRVRIKSAFKP*RTDGIT
Trigger: TGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACT...TTTTATGCGAACCCGGGAAGAAGAGCTAAAGAGCCTAGGAGCTGACTTCACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
3UTR-3UTR CCA 90 bp AGGGAAATAACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTACCCTGCAGGACAGATaGGATCACAAGATGATGGTC +
Preference number: 2 (lower is better)
Translates to: REITGCHFKQLLHKGSQATLQDR*DHKMMV
Trigger: GACCATCATCTTGTGATCCCATCTGTCCTGCAGGGT...AGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGTTATTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
3UTR CAA 90 bp CCATACACAGCACAGCAAGCATTCAGAGTCTGTAGAGAATCCAACTaGGCACTCAGAACCTCAGAATCCACTTTCTCAATCAACAGGGGC +
Preference number: 2 (lower is better)
Translates to: PYTAQQAFRVCRESN*ALRTSESTFSINRG
Trigger: GCCCCTGTTGATTGAGAAAGTGGATTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTACAGACTCTGAATGCTTGCTGTGCTGTGTATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR-3UTR TCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTCCCAGAGAAGAAGAGTaGAGGCCTGACTACGACAGG +
Preference number: 2 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFPREEE*RPDYDR
Trigger: CCTGTCGTAGTCAGGCCTTCACTCTTCTTCTCTGGG...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATACCCTGCAGGACAGATaGGATCACAAGATGATGGTC +
Preference number: 2 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYTLQDR*DHKMMV
Trigger: GACCATCATCTTGTGATCCCATCTGTCCTGCAGGGT...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAATATCGCCCCTTTTCTaGCATATAAATGCAAGAGAC +
Preference number: 2 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAISPLF*HINARD
Trigger: GTCTCTTGCATTTATATGTCAGAAAAGGGGCGATAT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR TCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGATATCGCCCCTTTTCTaGCATATAAATGCAAGAGAC +
Preference number: 2 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRISPLF*HINARD
Trigger: GTCTCTTGCATTTATATGTCAGAAAAGGGGCGATAT...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR TCA 90 bp GGTAAAATCGATAGGGAAATAACAGGATGTCACTTCAAACAACTCCTCCACAAATATAGTCCCTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 2 (lower is better)
Translates to: GKIDREITGCHFKQLLHKYSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAGGGACTATA...TTTGTGGAGGAGTTGTTTGAAGTGACATCCTGTTATTTCCCTATCGATTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
3UTR-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCATTCTTTGTACAGCCATaGAACAGAGGCCTAGCATTT +
Preference number: 2 (lower is better)
Translates to: KEIFILQQVDNICQPWSSFFVQP*NRGLAF
Trigger: AAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR TCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTATATCGCCCCTTTTCTaGCATATAAATGCAAGAGAC +
Preference number: 2 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFISPLF*HINARD
Trigger: GTCTCTTGCATTTATATGTCAGAAAAGGGGCGATAT...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CCA 90 bp ATTAGGTGGAGGGGTAAAATCGATAGGGAAATAACAGGATGTCACTTCAAACAATGTACATGCACTTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 2 (lower is better)
Translates to: IRWRGKIDREITGCHFKQCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACA...TTGTTTGAAGTGACATCCTGTTATTTCCCTATCGATTTTACCCCTCCACCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR-3UTR GCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTTTCTTTGTACAGCCATaGAACAGAGGCCTAGCATTT +
Preference number: 2 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSFFVQP*NRGLAF
Trigger: AAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR GCA 72 bp ACACGCAGTCAGGGAGTGGAGGGCCGCCAGGCCCTCTaGCTCCACCCGCTCACTTGCCGTCTGGAACACCTC +
Preference number: 3 (lower is better)
Translates to: TRSQGVEGRQAL*LHPLTCRLEHL
Trigger: GAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAGGCAGAGGGCCTGGCGGCCCTCCACTCCCTGACTGCGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 72 bp CTCAGCACAGAGCGAGACAAACACGCAGTCAGGGAGTaGAGGGCCGCCAGGCCCTCTGCCTCCACCCGCTCA +
Preference number: 3 (lower is better)
Translates to: LSTERDKHAVRE*RAARPSASTRS
Trigger: TGAGCGGGTGGAGGCAGAGGGCCTGGCGGCCCTCCACTCCCTGACTGCGTGTTTGTCTCGCTCTGTGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 72 bp GCTGGTGACAGAGTCACAGGCCCGGGCAGATGCACCTaGAGCTGCCTGCAACAGCTTGGCACTAGGCCACAC +
Preference number: 3 (lower is better)
Translates to: AGDRVTGPGRCT*SCLQQLGTRPH
Trigger: GTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGTGACTCTGTCACCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 72 bp ACAGGGGTGGGCAGGCGAGTGAGAGCATGCATGCACTaGAGTGCGGCGATCCGGACAGCCATGGAAGGGCTA +
Preference number: 3 (lower is better)
Translates to: TGVGRRVRACMH*SAAIRTAMEGL
Trigger: TAGCCCTTCCATGGCTGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCTCACTCGCCTGCCCACCCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 72 bp GAGTCACAGGCCCGGGCAGATGCACCTGCAGCTGCCTaGAACAGCTTGGCACTAGGCCACACCAGTTTCATG +
Preference number: 3 (lower is better)
Translates to: ESQARADAPAAA*NSLALGHTSFM
Trigger: CATGAAACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGTGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 72 bp GACAGAGTCACAGGCCCGGGCAGATGCACCTGCAGCTaGCTGCAACAGCTTGGCACTAGGCCACACCAGTTT +
Preference number: 3 (lower is better)
Translates to: DRVTGPGRCTCS*LQQLGTRPHQF
Trigger: AAACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGTGACTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CAA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCGGAGCATTTCAAGGATaGTCCGCCGCTGGCTGCTCT +
Preference number: 3 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPGAFQG*SAAGCS
Trigger: AGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCC...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CAA 90 bp GGGGCACAATGTGTGTCACACTCTGGGCAGCTAACTCAGGGCTCAGGTGGGTTGCAGATGCCGGGAGCATaGGGTGGGCTCATCTCCGTT +
Preference number: 3 (lower is better)
Translates to: GAQCVSHSGQLTQGSGGLQMPGA*GGLISV
Trigger: AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTG...CAACCCACCTGAGCCCTGAGTTAGCTGCCCAGAGTGTGACACACATTGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 72 bp TACATTGCTGGTGACAGAGTCACAGGCCCGGGCAGATaGACCTGCAGCTGCCTGCAACAGCTTGGCACTAGG +
Preference number: 3 (lower is better)
Translates to: YIAGDRVTGPGR*TCSCLQQLGTR
Trigger: CCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGTGACTCTGTCACCAGCAATGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 72 bp AAGAACCGCTGGCGGAACATGATCCGCACTTCGGCATaGCCAGCACGAGTCAGCACATCAGTGCAGTCAGAC +
Preference number: 3 (lower is better)
Translates to: KNRWRNMIRTSA*PARVSTSVQSD
Trigger: GTCTGACTGCACTGATGTGCTGACTCGTGCTGGCCATGCCGAAGTGCGGATCATGTTCCGCCAGCGGTTCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR TCA 72 bp CCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGAGATaGGGTCATGGACGATGCGGAAGGCCACCAGAAGAT +
Preference number: 3 (lower is better)
Translates to: PPQRVPGYSPWR*GHGRCGRPPED
Trigger: ATCTTCTGGTGGCCTTCCGCATCGTCCATGACCTCATCTCCAGGGACTATAGCCTGGGACCCTTTGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
3UTR GCA 72 bp GATCTGGCTGGGCACCCAAGACTGTCAGTGTACGGATaGCAACAAGCTGAAGCTGGGTGCTGGGGTCTGTTA +
Preference number: 3 (lower is better)
Translates to: DLAGHPRLSVYG*QQAEAGCWGLL
Trigger: TAACAGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAGTCTTGGGTGCCCAGCCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
3UTR GCA 72 bp ACGATGCTGGGATGTGTTGATACAGCTGACAAGGCTTaGAGACAGCACAGATGCCGGGAGCATTGGGTGGGC +
Preference number: 3 (lower is better)
Translates to: TMLGCVDTADKA*RQHRCREHWVG
Trigger: GCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGTATCAACACATCCCAGCATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 72 bp CAGACAAAGGCCATAAGCAGTGCAATCAGCCGCCTCTaGCCTGAGGAGCCATCCTGGAATGGCTGGAATCTG +
Preference number: 3 (lower is better)
Translates to: QTKAISSAISRL*PEEPSWNGWNL
Trigger: CAGATTCCAGCCATTCCAGGATGGCTCCTCAGGGCAGAGGCGGCTGATTGCACTGCTTATGGCCTTTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CAA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCGTGACAAAAGCTGGATaGCTCGTGCCCGAGTTCGGG +
Preference number: 3 (lower is better)
Translates to: CNRGLAFVLCLWERQSETVTKAG*LVPEFG
Trigger: CCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCAC...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CAA 90 bp ATCAACAGGGGCAGCAGAAACTCAGCAAATCGTGGTGTAGAAGCCAGCACAGCGGTGACAAAAGCTGGATaGCTCGTGCCCGAGTTCGGG +
Preference number: 3 (lower is better)
Translates to: INRGSRNSANRGVEASTAVTKAG*LVPEFG
Trigger: CCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCAC...CGCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTTCTGCTGCCCCTGTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR GCA 72 bp GTTGATACAGCTGACAAGGCTTGCAGACAGCACAGATaGCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTC +
Preference number: 3 (lower is better)
Translates to: VDTADKACRQHR*REHWVGSSPLV
Trigger: GACTAACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGTATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
3UTR CCA 72 bp TGTGTCACACTCTGGGCAGCTAACTCAGGGCTCAGGTaGGTTGTAGCAGTGCCAATGACAGACACCATGGCA +
Preference number: 3 (lower is better)
Translates to: CVTLWAANSGLR*VVAVPMTDTMA
Trigger: TGCCATGGTGTCTGTCATTGGCACTGCTACAACCCACCTGAGCCCTGAGTTAGCTGCCCAGAGTGTGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 72 bp TGGACCAAAGCAGGCACATTATCTGTGAAGAACCGCTaGCGGAACATGATCCGCACTTCGGCATGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: WTKAGTLSVKNR*RNMIRTSAWPA
Trigger: TGCTGGCCATGCCGAAGTGCGGATCATGTTCCGCCAGCGGTTCTTCACAGATAATGTGCCTGCTTTGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 72 bp CCTTGCGCACCAGTCTCTTCTTGTCATCCAGGGGTTTaGCTAAGGCCCGAATCACCTGTGGTTTGTACGGCA +
Preference number: 3 (lower is better)
Translates to: PCAPVSSCHPGV*LRPESPVVCTA
Trigger: TGCCGTACAAACCACAGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 72 bp CGGTCCACCTGTGGCAGGGACTGTACATGCACTTCCTaGAAGATGGCTTTAAGCACAGAAACAGCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: RSTCGRDCTCTS*KMALSTETASP
Trigger: AGGGCTGGCTGTTTCTGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCCACAGGTGGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
3UTR CCA 72 bp GACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTaGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCC +
Preference number: 3 (lower is better)
Translates to: DKACRQHRCREH*VGSSPLVKFDS
Trigger: GGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
3UTR-3UTR CAA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGGACTCTTATGTTCTTaGTACAGCCATGCAACAGAG +
Preference number: 3 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISGLLCS*YSHATE
Trigger: CTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCC...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CAA 90 bp AGTAGTTTGGCTTCACATCTTGGGGAGCAGCATGGAAGCCCTGGACCAAAGCAGAGAGGCAGTGTCTCCTaGACGATGCTGGGATGTGTT +
Preference number: 3 (lower is better)
Translates to: SSLASHLGEQHGSPGPKQRGSVS*TMLGCV
Trigger: AACACATCCCAGCATCGTCAAGGAGACACTGCCTCT...CTGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAACTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR TCA 72 bp CTCAGTTCCAAAAGCTCCCGCATGAGTTGGTTCAGCTaGGGGATTTCCACATTTCGAGGCAGGGAGCAGACA +
Preference number: 3 (lower is better)
Translates to: LSSKSSRMSWFS*GISTFRGREQT
Trigger: TGTCTGCTCCCTGCCTCGAAATGTGGAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGGAACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR TCA 72 bp AGCTGTGGCAGCAGCTCAGTTCCAAAAGCTCCCGCATaGGTTGGTTCAGCTGAGGGATTTCCACATTTCGAG +
Preference number: 3 (lower is better)
Translates to: SCGSSSVPKAPA*VGSAEGFPHFE
Trigger: CTCGAAATGTGGAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGGAACTGAGCTGCTGCCACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 72 bp TGTGCAACCATATTCCCTCTGTTCACTTGCCAGAGATaGTGCAGCAGCAGAGGCAGTGTCTCCTTGACGATG +
Preference number: 3 (lower is better)
Translates to: CATIFPLFTCQR*CSSRGSVSLTM
Trigger: CATCGTCAAGGAGACACTGCCTCTGCTGCTGCAGCATCTCTGGCAAGTGAACAGAGGGAATATGGTTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 72 bp TGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTaGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTT +
Preference number: 3 (lower is better)
Translates to: CAVSVGKAVRDQ*FPCFGEDGSTV
Trigger: AACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR CCA 72 bp ACACAGGCTAAGTGCCTTCAAACCCTGCAGGACAGATaGGATCACAAGATGATGGTCCTTCAGCCGGTTCTC +
Preference number: 3 (lower is better)
Translates to: TQAKCLQTLQDR*DHKMMVLQPVL
Trigger: GAGAACCGGCTGAAGGACCATCATCTTGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
3UTR CCA 72 bp TTTGGCTTCACATCTTGGGGAGCAGCATGGAAGCCCTaGACCAAAGCAGGCACATTATCTGTGAAGAACCGC +
Preference number: 3 (lower is better)
Translates to: FGFTSWGAAWKP*TKAGTLSVKNR
Trigger: GCGGTTCTTCACAGATAATGTGCCTGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CAA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDSGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CAA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: CTAMQQRPSICAVSVGKASGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CAA 90 bp TCCCCATCCATCACCTGGATGAAGCCAAAGGTGAAGTCAGCTCCTAGGCTCTTTAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: SPSITWMKPKVKSAPRLFSGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...AAAGAGCCTAGGAGCTGACTTCACCTTTGGCTTCATCCAGGTGATGGATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR-3UTR CAA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERSGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CAA 90 bp CAAGTAGTTTGGCTTCACATCTTGGGGAGCAGCATGGAAGCCCTGGACCAAAGCCAGTCCTGTAGAATGTaGCTAAGGAAGGAGTCAAGG +
Preference number: 3 (lower is better)
Translates to: QVVWLHILGSSMEALDQSQSCRM*LRKESR
Trigger: CCTTGACTCCTTCCTTAGCAACATTCTACAGGACTG...GCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAACTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR TCA 72 bp CTGAGGTTCAGAAACTTGGTGACGAGGGTGTCCACGTaGAGACTCATGACTTGGGGTGCTTCCAGTAGAAGA +
Preference number: 3 (lower is better)
Translates to: LRFRNLVTRVST*RLMTWGASSRR
Trigger: TCTTCTACTGGAAGCACCCCAAGTCATGAGTCTTCACGTGGACACCCTCGTCACCAAGTTTCTGAACCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR GCA 72 bp TCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCAACAGTTAGTAATCCC +
Preference number: 3 (lower is better)
Translates to: SVGKAVRDQWFP*FGEDGSTVSNP
Trigger: GGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR CCA 72 bp AGCACAGCGCGAAGACTCAGGATGAGGTCTTCTCTCTaGATACCATGGGGATCATTAGGTGGAGGGGTAAAA +
Preference number: 3 (lower is better)
Translates to: STARRLRMRSSL*IPWGSLGGGVK
Trigger: TTTTACCCCTCCACCTAATGATCCCCATGGTATCCAGAGAGAAGACCTCATCCTGAGTCTTCGCGCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR-3UTR CAA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 3 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWESGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR TCA 72 bp ATCAGGTGTACCACTTCCTTCTCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGTGACAAAAGCTGGATT +
Preference number: 3 (lower is better)
Translates to: IRCTTSFSRSKV*QWSSTCDKSWI
Trigger: AATCCAGCTTTTGTCACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGAGAAGGAAGTGGTACACCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR CCA 72 bp CGAAGACTCAGGATGAGGTCTTCTCTCTGGATACCATaGGGATCATTAGGTGGAGGGGTAAAATCGATAGGG +
Preference number: 3 (lower is better)
Translates to: RRLRMRSSLWIP*GSLGGGVKSIG
Trigger: CCCTATCGATTTTACCCCTCCACCTAATGATCCCCATGGTATCCAGAGAGAAGACCTCATCCTGAGTCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR-3UTR CAA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGGACTCTTATGTTCTTaGTACAGCCATGCAACAGAG +
Preference number: 3 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAGLLCS*YSHATE
Trigger: CTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCC...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGGACTCTTATGTTCTTaGTACAGCCATGCAACAGAG +
Preference number: 3 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRGLLCS*YSHATE
Trigger: CTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR GCA 72 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTaGCAGCCCTGGTCCTCAGGGCCACACTCATATGCA +
Preference number: 3 (lower is better)
Translates to: KEIFILQQVDNI*QPWSSGPHSYA
Trigger: TGCATATGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
3UTR-3UTR CAA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTAGTAAAGGCAGTACATaGCTGGTGACAGAGTCACAG +
Preference number: 3 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFSKGST*LVTESQ
Trigger: CTGTGACTCTGTCACCAGCAATGTACTGCCTTTACT...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CCA 72 bp CACAGCAAGCATTCAGAGTCTGTAGAGAATCCAACTTaGCACTCAGAACCTCAGAATCCACTTTCTCAATCA +
Preference number: 3 (lower is better)
Translates to: HSKHSESVENPT*HSEPQNPLSQS
Trigger: TGATTGAGAAAGTGGATTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTACAGACTCTGAATGCTTGCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
3UTR-3UTR CAA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTGGACTCTTATGTTCTTaGTACAGCCATGCAACAGAG +
Preference number: 3 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFGLLCS*YSHATE
Trigger: CTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCC...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp TCAGGGAGTGGAGGGCCGCCAGGCCCTCTGCCTCCACCCGCTCACTTGCCGTCTCGCCGCTGGCTGCTCTaGCTGTGCTTGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SGSGGPPGPLPPPAHLPSRRWLL*LCLWNC
Trigger: ACAGTTCCACAAGCACAGTCAGAGCAGCCAGCGGCG...AGACGGCAAGTGAGCGGGTGGAGGCAGAGGGCCTGGCGGCCCTCCACTCCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGGCCGCCAGGCCCTCTaGCTCCACCCGCTCACTTGC +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISGRQAL*LHPLTC
Trigger: GCAAGTGAGCGGGTGGAGGCAGAGGGCCTGGCGGCC...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TCAGGGAGTGGAGGGCCGCCAGGCCCTCTGCCTCCACCCGCTCACTTGCCGTCTTCTTGGGGAGCAGCATaGAAGCCCTGGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SGSGGPPGPLPPPAHLPSSWGAA*KPWTKA
Trigger: TGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGA...AGACGGCAAGTGAGCGGGTGGAGGCAGAGGGCCTGGCGGCCCTCCACTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCACGCAGTCAGGGAGTaGAGGGCCGCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPHAVRE*RAARPS
Trigger: AGAGGGCCTGGCGGCCCTCCACTCCCTGACTGCGTG...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGCGGGGCCCTCTTGCTaGCCCACGACGAAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISAGPSC*PTTKSC
Trigger: GCACGACTTCGTCGTGGGTCAGCAAGAGGGCCCCGC...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCCGGGCTCTCCGCGCATaGGCCTCCCGAGCCAATCTC +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIRALRA*ASRANL
Trigger: GAGATTGGCTCGGGAGGCGCATGCGCGGAGAGCCCG...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS-3UTR GCA 90 bp CTTCCAGTGCTGCCACCCTGCAACTCTGGGAATCCTCCTTCAGGAAGCTCAGTCGGCCGCCAGGCCCTCTaGCTCCACCCGCTCACTTGC +
Preference number: 4 (lower is better)
Translates to: LPVLPPCNSGNPPSGSSVGRQAL*LHPLTC
Trigger: GCAAGTGAGCGGGTGGAGGCAGAGGGCCTGGCGGCC...GACTGAGCTTCCTGAAGGAGGATTCCCAGAGTTGCAGGGTGGCAGCACTGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS-3UTR TCA 90 bp AGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGTGCCTTCAAACCCTGCAGCTCAGTCTGTACAGGTaGCCCACTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SQPWGQGHTQAKCLQTLQLSLYR*PTASSK
Trigger: CTTGGAGCTGGCAGTGGGTCACCTGTACAGACTGAG...CTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCACCGCTGGCGGAACATaGTCCGCACTTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPTAGGT*SALRHG
Trigger: GCCATGCCGAAGTGCGGATCATGTTCCGCCAGCGGT...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCGGGTGGGCAGGCGAGTaGGAGCATGCATGCACTGCA +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPGWAGE*EHACTA
Trigger: TGCAGTGCATGCATGCTCTCACTCGCCTGCCCACCC...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTAGTCTAGGCCAGGACTaGGGGCTCAGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPSLGQD*GLSCQG
Trigger: GCCCTGGCAGCTGAGCCCTCAGTCCTGGCCTAGACT...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCCCCACGACGAAGTCGTaGACGAGGCCCCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPPTTKS*TRPHRA
Trigger: TGCCCTATGGGGCCTCGTGCACGACTTCGTCGTGGG...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTAGGGGATATGGGCGGTaGCTCGAGACGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPRGYGR*LETGSP
Trigger: CGGAGAGCCCGTCTCGAGCCACCGCCCATATCCCCT...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS-3UTR CCA 90 bp TCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCTTGGGTACGAGGTGGCCACGCAGTCAGGGAGTaGAGGGCCGCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SNLTPLHAAPQRAWVRGGHAVRE*RAARPS
Trigger: AGAGGGCCTGGCGGCCCTCCACTCCCTGACTGCGTG...GCCACCTCGTACCCAAGCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
3UTR CAA 72 bp TCCAGGGGTTTGGCTAAGGCCCGAATCACCTGTGGTTaGTACGGCAGCAGCACAGGGGTGGGCAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: SRGLAKARITCG*YGSSTGVGRRV
Trigger: CACTCGCCTGCCCACCCCTGTGCTGCTGCCGTACAAACCACAGGTGATTCGGGCCTTAGCCAAACCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCAGCAGCCAGGGTTCCTaGTGCTTCCAGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPSSQGS*CFQCCH
Trigger: GTGGCAGCACTGGAAGCATCAGGAACCCTGGCTGCT...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTACCGCTGGCGGAACATaGTCCGCACTTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPTAGGT*SALRHG
Trigger: GCCATGCCGAAGTGCGGATCATGTTCCGCCAGCGGT...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GGGCACCCAAGACTGTCAGTGTACGGATGCCAACAAGCTGAAGCTGGGTGCTGGGGGTGGGCAGGCGAGTaGGAGCATGCATGCACTGCA +
Preference number: 4 (lower is better)
Translates to: GHPRLSVYGCQQAEAGCWGWAGE*EHACTA
Trigger: TGCAGTGCATGCATGCTCTCACTCGCCTGCCCACCC...CCAGCACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAGTCTTGGGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGGTGGGCAGGCGAGTaGGAGCATGCATGCACTGCA +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIGWAGE*EHACTA
Trigger: TGCAGTGCATGCATGCTCTCACTCGCCTGCCCACCC...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTGGGTGGGCAGGCGAGTaGGAGCATGCATGCACTGCA +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPGWAGE*EHACTA
Trigger: TGCAGTGCATGCATGCTCTCACTCGCCTGCCCACCC...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTCCCACGACGAAGTCGTaGACGAGGCCCCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPPTTKS*TRPHRA
Trigger: TGCCCTATGGGGCCTCGTGCACGACTTCGTCGTGGG...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTGCAATCAGCCGCCTCTaGCCTGAGGAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPAISRL*PEEPSW
Trigger: CCAGGATGGCTCCTCAGGGCAGAGGCGGCTGATTGC...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGTGCCTGCCGGCTTCTaGCTAGGCAGTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISVPAGF*LGSSRE
Trigger: CTCCCTGGAACTGCCTAGGCAGAAGCCGGCAGGCAC...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS-3UTR GCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGACAGGCCCGGGCAGATaGACCTGCAGCTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISTGPGR*TCSCLQ
Trigger: TTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGT...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATCTCCGTTACAGGCCCGGGCAGATaGACCTGCAGCTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: QGLQTAQMPGALGGLISVTGPGR*TCSCLQ
Trigger: TTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGT...AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCATGCATGCACTGCAGTaGGGCGATCCGGACAGCCGT +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPMHALQ*GDPDSR
Trigger: ACGGCTGTCCGGATCGCCGCACTGCAGTGCATGCAT...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444411.5
CDS-3UTR CCA 90 bp AGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGTGCCTTCAAACCCTGCAGCCATCCTGGAATGGCTaGAATCTGCTCGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SQPWGQGHTQAKCLQTLQPSWNG*NLLGKL
Trigger: CAGCTTCCCGAGCAGATTCCAGCCATTCCAGGATGG...CTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CAA 72 bp GCCCGGGCAGATGCACCTGCAGCTGCCTGCAACAGCTaGGCACTAGGCCACACCAGTTTCATGTCCGGTTCA +
Preference number: 4 (lower is better)
Translates to: ARADAPAAACNS*ALGHTSFMSGS
Trigger: TGAACCGGACATGAAACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAGCGGGGCCCTCTTGCTaGCCCACGACGAAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATAGPSC*PTTKSC
Trigger: GCACGACTTCGTCGTGGGTCAGCAAGAGGGCCCCGC...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGTGCCTTCAAACCCTCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: ETASPGGRATHRLSAFKPSRSKV*QWSSTC
Trigger: ACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGA...GGGTTTGAAGGCACTTAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR TCA 90 bp ATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGCAGCCAGGGTTCCTaGTGCTTCCAGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: MALSTETASPGGRATHRLSSQGS*CFQCCH
Trigger: GTGGCAGCACTGGAAGCATCAGGAACCCTGGCTGCT...TAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGAGCAGCCAGGGTTCCTaGTGCTTCCAGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISSSQGS*CFQCCH
Trigger: GTGGCAGCACTGGAAGCATCAGGAACCCTGGCTGCT...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GGCACTAGGCCACACCAGTTTCATGTCCGGTTCACACAGGTGGTGCCTGCAGTCGTACGAGGTGGCTGCTaGAGGCCACAGGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: GTRPHQFHVRFTQVVPAVVRGGC*RPQGRE
Trigger: CTCTCTACCCTGTGGCCTTCAGCAGCCACCTCGTAC...GACTGCAGGCACCACCTGTGTGAACCGGACATGAAACTGGTGTGGCCTAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCAGAAGAGTGAAGGCCTaGCTACGACAGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPRRVKA*LRQGPE
Trigger: CTCTGGGCCCTGTCGTAGTCAGGCCTTCACTCTTCT...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTCCAGTAGAAGAGGCTaGAGGCAGCTGAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPSSRRG*RQLRVE
Trigger: CTCCACCCTCAGCTGCCTTCAGCCTCTTCTACTGGA...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCCGCCGCTGGCTGCTCTaGCTGTGCTTGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIRRWLL*LCLWNC
Trigger: ACAGTTCCACAAGCACAGTCAGAGCAGCCAGCGGCG...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCGCCGCTGGCTGCTCTaGCTGTGCTTGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISRRWLL*LCLWNC
Trigger: ACAGTTCCACAAGCACAGTCAGAGCAGCCAGCGGCG...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGTGCAGACAGCACAGATaGCGGGAGCATTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISCRQHR*REHWVG
Trigger: GCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCA...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCATCCAGCTGCTGCCCTaGAGGGTGCTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPIQLLP*RVLVEE
Trigger: CTCCTCAACAAGCACCCTGCAGGGCAGCAGCTGGAT...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCAGGCGAGTGAGAGCATaGATGCACTGCAGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIRRVRA*MHCSAA
Trigger: CGCCGCACTGCAGTGCATGCATGCTCTCACTCGCCT...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCCCGGGGTCACGTGCCTaGCGGCTTCTGCCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETPGSRA*RLLPRQ
Trigger: CTGCCTAGGCAGAAGCCGGCAGGCACGTGACCCCGG...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS-3UTR GCA 90 bp CTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATCTCCCGGGCAGATGCACCTaGAGCTGCCTGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LTRLADSTDAGSIGWAHLPGRCT*SCLQQL
Trigger: AAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGG...GAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCGTGTCGGTCCACCTGTaGCAGGGACTGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPVSVHL*QGLYMH
Trigger: GTGCATGTACAGTCCCTGCCACAGGTGGACCGACAC...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR CCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTAGCTTGGGTACGAGGTaGCTGCTGAAGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPSLGTR*LLKATG
Trigger: CCCTGTGGCCTTCAGCAGCCACCTCGTACCCAAGCT...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCATCCGCACTTCGGCATaGCCAGCACGAGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPIRTSA*PARVST
Trigger: TGTGCTGACTCGTGCTGGCCATGCCGAAGTGCGGAT...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CGAGACAAACACGCAGTCAGGGAGTGGAGGGCCGCCAGGCCCTCTGCCTCCACCACCCTTCAAGTAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RDKHAVREWRAARPSASTTLQVV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGT...GGTGGAGGCAGAGGGCCTGGCGGCCCTCCACTCCCTGACTGCGTGTTTGTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCAACATCTGCCAGCCCTaGTCCTCAGGGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPNICQP*SSGPHS
Trigger: TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTT...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACCGTGGGAGGGGATATaGGCGGTGGCTCGAGACGGG +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATPWEGI*AVARDG
Trigger: CCCGTCTCGAGCCACCGCCCATATCCCCTCCCACGG...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS-3UTR CCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCCACGCAGTCAGGGAGTaGAGGGCCGCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETHAVRE*RAARPS
Trigger: AGAGGGCCTGGCGGCCCTCCACTCCCTGACTGCGTG...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
3UTR CAA 72 bp CCTGCAGGGTGCTTGTTGAGGAGTCCTGCAAAGCACTaGGCAGCAGCGGTGGAAGAAAAGGGGCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PAGCLLRSPAKH*AAAVEEKGQLW
Trigger: CCACAGCTGCCCCTTTTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCGCGGGGCCCTCTTGCTaGCCCACGACGAAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAAGPSC*PTTKSC
Trigger: GCACGACTTCGTCGTGGGTCAGCAAGAGGGCCCCGC...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GGGCACCCAAGACTGTCAGTGTACGGATGCCAACAAGCTGAAGCTGGGTGCTGGCTCAGTCTGTACAGGTaGCCCACTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GHPRLSVYGCQQAEAGCWLSLYR*PTASSK
Trigger: CTTGGAGCTGGCAGTGGGTCACCTGTACAGACTGAG...CCAGCACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAGTCTTGGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR TCA 90 bp TCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCTTGGGTACGAGGTGGCAGCAGCCAGGGTTCCTaGTGCTTCCAGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SNLTPLHAAPQRAWVRGGSSQGS*CFQCCH
Trigger: GTGGCAGCACTGGAAGCATCAGGAACCCTGGCTGCT...GCCACCTCGTACCCAAGCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR TCA 90 bp CTTCCAGTGCTGCCACCCTGCAACTCTGGGAATCCTCCTTCAGGAAGCTCAGTCGTACGAGGTGGCTGCTaGAGGCCACAGGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: LPVLPPCNSGNPPSGSSVVRGGC*RPQGRE
Trigger: CTCTCTACCCTGTGGCCTTCAGCAGCCACCTCGTAC...GACTGAGCTTCCTGAAGGAGGATTCCCAGAGTTGCAGGGTGGCAGCACTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS-3UTR TCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCCAAAAGCTCCCGCATaGGTTGGTTCAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPPKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGG...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCCCAAAAGCTCCCGCATaGGTTGGTTCAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPPKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGG...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCACGAGGGTGTCCACGTaGAGACTCATGACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPTRVST*RLMTWG
Trigger: ACCCCAAGTCATGAGTCTTCACGTGGACACCCTCGT...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAAGTCTAGGCCAGGACTaGGGGCTCAGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATSLGQD*GLSCQG
Trigger: GCCCTGGCAGCTGAGCCCTCAGTCCTGGCCTAGACT...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTAAGCTGGATTGCTCGTaGCCGAGTTCGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPKLDCS*PSSGFW
Trigger: CCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTT...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAAGCTGGATTGCTCGTaGCCGAGTTCGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: MALSTETASPGGRATHRLKLDCS*PSSGFW
Trigger: CCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTT...TAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR GCA 90 bp TCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCTTGGGTACGAGGTGGCTGCAGACAGCACAGATaGCGGGAGCATTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: SNLTPLHAAPQRAWVRGGCRQHR*REHWVG
Trigger: GCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCA...GCCACCTCGTACCCAAGCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAGCAATCAGCCGCCTCTaGCCTGAGGAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSAISRL*PEEPSW
Trigger: CCAGGATGGCTCCTCAGGGCAGAGGCGGCTGATTGC...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCAGGTAGACAACATCTaGCAGCCCTGGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISQVDNI*QPWSSG
Trigger: CCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTG...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp GCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGTCTCCACCCGCTCACTTaGCGTCTGGAACACCTCTCT +
Preference number: 4 (lower is better)
Translates to: ALSTETASPGGRATHRLSLHPLT*RLEHLS
Trigger: AGAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAG...ACTTAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp GGCACTAGGCCACACCAGTTTCATGTCCGGTTCACACAGGTGGTGCCTGCAGTCCTGGAGATGAGGTCATaGACGATGCGGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: GTRPHQFHVRFTQVVPAVLEMRS*TMRKAT
Trigger: GGTGGCCTTCCGCATCGTCCATGACCTCATCTCCAG...GACTGCAGGCACCACCTGTGTGAACCGGACATGAAACTGGTGTGGCCTAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp GTTCCTGATGCTTCCAGTGCTGCCACCCTGCAACTCTGGGAATCCTCCTTCAGGAGCTTGGGTACGAGGTaGCTGCTGAAGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: VPDASSAATLQLWESSFRSLGTR*LLKATG
Trigger: CCCTGTGGCCTTCAGCAGCCACCTCGTACCCAAGCT...CCTGAAGGAGGATTCCCAGAGTTGCAGGGTGGCAGCACTGGAAGCATCAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS-3UTR CCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCAGGAGCTGAGAGGATaGTATCTGAGCACTAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPQELRG*YLSTRA
Trigger: GGCCCTAGTGCTCAGATACCATCCTCTCAGCTCCTG...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCATCCGCACTTCGGCATaGCCAGCACGAGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIIRTSA*PARVST
Trigger: TGTGCTGACTCGTGCTGGCCATGCCGAAGTGCGGAT...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGTGCCTTCTTTGGCTTCACATCTTaGGGAGCAGCATGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: STETASPGGRATHRLSAFFGFTS*GAAWKP
Trigger: GGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAA...GAAGGCACTTAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGGCCCGAATCACCTGTaGTTTGTACGGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISGPNHL*FVRQQH
Trigger: GTGCTGCTGCCGTACAAACCACAGGTGATTCGGGCC...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCCGCTCACTTGCCGTCTaGAACACCTCTCTGCGGATA +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPRSLAV*NTSLRI
Trigger: TATCCGCAGAGAGGTGTTCCAGACGGCAAGTGAGCG...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAGGCAGGACAGGGCCGTaGGCAGCTCTGGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSGRTGP*AALARV
Trigger: TACTCTTGCCAGAGCTGCCCACGGCCCTGTCCTGCC...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434538.5
CDS-3UTR TCA 90 bp GCAGGACAGATGGGATCACAAGATGATGGTCCTTCAGCCGGTTCTCATAGAACAGCGGGGCCCTCTTGCTaGCCCACGACGAAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: AGQMGSQDDGPSAGSHRTAGPSC*PTTKSC
Trigger: GCACGACTTCGTCGTGGGTCAGCAAGAGGGCCCCGC...TGTTCTATGAGAACCGGCTGAAGGACCATCATCTTGTGATCCCATCTGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR TCA 90 bp GGGGCACAATGTGTGTCACACTCTGGGCAGCTAACTCAGGGCTCAGGTGGGTTGTCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: GAQCVSHSGQLTQGSGGLSRSKV*QWSSTC
Trigger: ACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGA...CAACCCACCTGAGCCCTGAGTTAGCTGCCCAGAGTGTGACACACATTGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCAAAAGCTCCCGCATaGGTTGGTTCAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISPKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGG...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCCTGCAGGGTGCTTGTTaGGGAGTCCTGCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHILQGAC*GVLQST
Trigger: AGTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAG...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCCCACGTGAAGACTCATaGCTTGGGGTGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPPREDS*LGVLPV
Trigger: TACTGGAAGCACCCCAAGTCATGAGTCTTCACGTGG...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCCACGTGAAGACTCATaGCTTGGGGTGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPPREDS*LGVLPV
Trigger: TACTGGAAGCACCCCAAGTCATGAGTCTTCACGTGG...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCACGCCGCTGGCTGCTCTaGCTGTGCTTGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSRRWLL*LCLWNC
Trigger: ACAGTTCCACAAGCACAGTCAGAGCAGCCAGCGGCG...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GTCAGCACATCAGTGCAGTCAGACATGAGCAGAGAGAAGCCATCAGCTGCTGCTCCCACGACGAAGTCGTaGACGAGGCCCCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: VSTSVQSDMSREKPSAAAPTTKS*TRPHRA
Trigger: TGCCCTATGGGGCCTCGTGCACGACTTCGTCGTGGG...AGCAGCAGCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTGATGTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp GAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGTGCCTTCAAACCCAGTGCCTTCAAACCCTaGAGGACAGATGGGATCACA +
Preference number: 4 (lower is better)
Translates to: ETASPGGRATHRLSAFKPSAFKP*RTDGIT
Trigger: TGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACT...GGGTTTGAAGGCACTTAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR GCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCCAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAGCTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATACAGCTGACAAGGCTTaGAGACAGCACAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: QLTRLADSTDAGSIGWAHTADKA*RQHRCR
Trigger: CCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGT...ATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTTGTTGAGGAGTCCTaGAAAGCACTTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPLVEES*KALGSS
Trigger: GCTGCTGCCAAGTGCTTTGCAGGACTCCTCAACAAG...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCAGGAATTCATCCAGCTaGTGCCCTGCAGGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIRNSSS*CPAGCL
Trigger: CAAGCACCCTGCAGGGCAGCAGCTGGATGAATTCCT...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAGGGGCAGCAGAAACTCAGCAAATCGTGGTGTAGAAGCCAGCACAGCGCGAAGAGAGCATGCATGCACTaGAGTGCGGCGATCCGGACA +
Preference number: 4 (lower is better)
Translates to: QGQQKLSKSWCRSQHSAKRACMH*SAAIRT
Trigger: TGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCT...CTTCGCGCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTTCTGCTGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp GCAAGGTGTGACAGTGGAGTAGCACCTGTGACAAAAGCTGGATTGCTCGTGCCCAGGCGAGTGAGAGCATaGATGCACTGCAGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: ARCDSGVAPVTKAGLLVPRRVRA*MHCSAA
Trigger: CGCCGCACTGCAGTGCATGCATGCTCTCACTCGCCT...GGGCACGAGCAATCCAGCTTTTGTCACAGGTGCTACTCCACTGTCACACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp CTGTCAGTGTACGGATGCCAACAAGCTGAAGCTGGGTGCTGGGGTCTGTTAGAGCCGGGCAGATGCACCTaGAGCTGCCTGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LSVYGCQQAEAGCWGLLEPGRCT*SCLQQL
Trigger: AAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGG...CTCTAACAGACCCCAGCACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp TGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACAACAGGCCCGGGCAGATaGACCTGCAGCTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: CREHWVGSSPLVKFDSPTTGPGR*TCSCLQ
Trigger: TTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGT...TGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAAGCTTGGGTACGAGGTaGCTGCTGAAGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSSLGTR*LLKATG
Trigger: CCCTGTGGCCTTCAGCAGCCACCTCGTACCCAAGCT...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGATGCCGGGAGCATTaGGTGGGCTCATCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: MALSTETASPGGRATHRLRCREH*VGSSPL
Trigger: TAACGGAGATGAGCCCACCCAATGCTCCCGGCATCT...TAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp CAGCTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATAGATGCCGGGAGCATTaGGTGGGCTCATCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: QLTRLADSTDAGSIGWAHRCREH*VGSSPL
Trigger: TAACGGAGATGAGCCCACCCAATGCTCCCGGCATCT...ATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTCCATCCTGGAATGGCTaGAATCTGCTCGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPPSWNG*NLLGKL
Trigger: CAGCTTCCCGAGCAGATTCCAGCCATTCCAGGATGG...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGGAGCCATCCTGGAATaGCTGGAATCTGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISGAILE*LESARE
Trigger: TTCCCGAGCAGATTCCAGCCATTCCAGGATGGCTCC...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCTGAGGAGCCATCCTaGAATGGCTGGAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISPEEPS*NGWNLL
Trigger: GAGCAGATTCCAGCCATTCCAGGATGGCTCCTCAGG...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGACTTGGCAGCAGCGGTaGAAGAAAAGGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISTWQQR*KKRGSC
Trigger: ACAGCTGCCCCTTTTCTTCCACCGCTGCTGCCAAGT...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTACTTGGCAGCAGCGGTaGAAGAAAAGGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPTWQQR*KKRGSC
Trigger: ACAGCTGCCCCTTTTCTTCCACCGCTGCTGCCAAGT...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCGTCCTGCAAAGCACTTaGCAGCAGCGGTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPVLQST*QQRWKK
Trigger: TTTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGAC...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCGCAAGGAAAGAAGCGTaGGCAGCTCTGGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPARKEA*AALARV
Trigger: TACTCTTGCCAGAGCTGCCCACGCTTCTTTCCTTGC...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTGTCATCCAGGGGTTTaGCTAAGGCCCGAATCACCT +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPCHPGV*LRPESP
Trigger: AGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACA...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCTGTCATCCAGGGGTTTaGCTAAGGCCCGAATCACCT +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPCHPGV*LRPESP
Trigger: AGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACA...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGGGCGGGGCCTGAAATaGGGCGGTGGCACCGAGAGG +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRGRGLK*GGGTER
Trigger: CCTCTCGGTGCCACCGCCCCATTTCAGGCCCCGCCC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS-3UTR CCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTCGCTCACTTGCCGTCTaGAACACCTCTCTGCGGATA +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPRSLAV*NTSLRI
Trigger: TATCCGCAGAGAGGTGTTCCAGACGGCAAGTGAGCG...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTACGCTCACTTGCCGTCTaGAACACCTCTCTGCGGATA +
Preference number: 4 (lower is better)
Translates to: MALSTETASPGGRATHRLRSLAV*NTSLRI
Trigger: TATCCGCAGAGAGGTGTTCCAGACGGCAAGTGAGCG...TAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAGCGGGGCCCTCTTGCTaGCCCACGACGAAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLAGPSC*PTTKSC
Trigger: GCACGACTTCGTCGTGGGTCAGCAAGAGGGCCCCGC...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTAGCACAGCTGGTCCTTaGAGCCATTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPSTAGP*SHSEAF
Trigger: AAAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCT...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGAGCACAGCTGGTCCTTaGAGCCATTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISSTAGP*SHSEAF
Trigger: AAAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCT...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGCACAGCTGGTCCTTaGAGCCATTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: QGLQTAQMPGALGGLISVSTAGP*SHSEAF
Trigger: AAAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCT...AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR TCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCGGTCTGTTAGAGCCATaGATACCAGTGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPGLLEP*IPVSTA
Trigger: AGCTGTGCTCACTGGTATTCATGGCTCTAACAGACC...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCTCCGTTAGTCAAATTTaGCTCCCCTACACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPSVSQI*LPYTQL
Trigger: GAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGA...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCAGTGCAGTCAGACATaGGCAGAGAGAAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISQCSQT*AERSHQ
Trigger: CTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTG...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCCAGGCACATTATCTGTaGAGAACCGCTGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIQAHYL*RTAGGT
Trigger: TGTTCCGCCAGCGGTTCTTCACAGATAATGTGCCTG...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGCACTTCCTGGAAGATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGTCCAGTAGAAGAGGCTaGAGGCAGCTGAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: MHFLEDGFKHRNSQPWGQSSRRG*RQLRVE
Trigger: CTCCACCCTCAGCTGCCTTCAGCCTCTTCTACTGGA...CTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCATCTTCCAGGAAGTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTCCACGTGAAGACTCATaGCTTGGGGTGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPPREDS*LGVLPV
Trigger: TACTGGAAGCACCCCAAGTCATGAGTCTTCACGTGG...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGTTCAGAAACTTGGTaGCGAGGGTGTCCACGTGAA +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIGSETW*RGCPRE
Trigger: TTCACGTGGACACCCTCGTCACCAAGTTTCTGAACC...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGAGTCTAGGCCAGGACTaGGGGCTCAGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERSLGQD*GLSCQG
Trigger: GCCCTGGCAGCTGAGCCCTCAGTCCTGGCCTAGACT...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCCCACGACGAAGTCGTaGACGAGGCCCCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDPTTKS*TRPHRA
Trigger: TGCCCTATGGGGCCTCGTGCACGACTTCGTCGTGGG...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCACACACAGGCTAAGTaGCTTCAAACCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISHTQAK*LQTLQD
Trigger: GTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGCAGGGACTGTACATaGACTTCCTGGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIGRDCT*TSWKMA
Trigger: AGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCC...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR GCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCTGCAGACAGCACAGATaGCGGGAGCATTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETCRQHR*REHWVG
Trigger: GCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCA...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GAGATGAGGTCATGGACGATGCGGAAGGCCACCAGAAGATTACGGGGATCCTTTTGCAGACAGCACAGATaGCGGGAGCATTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: EMRSWTMRKATRRLRGSFCRQHR*REHWVG
Trigger: GCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCA...AAAGGATCCCCGTAATCTTCTGGTGGCCTTCCGCATCGTCCATGACCTCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTGCAATCAGCCGCCTCTaGCCTGAGGAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLAISRL*PEEPSW
Trigger: CCAGGATGGCTCCTCAGGGCAGAGGCGGCTGATTGC...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCTTGTTGAGGAGTCCTaGAAAGCACTTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISLVEES*KALGSS
Trigger: GCTGCTGCCAAGTGCTTTGCAGGACTCCTCAACAAG...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCCTTGTTGAGGAGTCCTaGAAAGCACTTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHILVEES*KALGSS
Trigger: GCTGCTGCCAAGTGCTTTGCAGGACTCCTCAACAAG...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAATCCAGCTGCTGCCCTaGAGGGTGCTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSIQLLP*RVLVEE
Trigger: CTCCTCAACAAGCACCCTGCAGGGCAGCAGCTGGAT...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCTTGGGTACGAGGTGGCAGGAATTCATCCAGCTaGTGCCCTGCAGGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SNLTPLHAAPQRAWVRGGRNSSS*CPAGCL
Trigger: CAAGCACCCTGCAGGGCAGCAGCTGGATGAATTCCT...GCCACCTCGTACCCAAGCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPDQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATGGCCGCCAGGCCCTCTaGCTCCACCCGCTCACTTGC +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYGRQAL*LHPLTC
Trigger: GCAAGTGAGCGGGTGGAGGCAGAGGGCCTGGCGGCC...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGCAGCTCCGCACCTGCAGCTGCCTaGAACAGCTTGGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: HWVGSSPLVKFDSPTRSSAPAAA*NSLALG
Trigger: GCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGC...GGAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACCGGGCAGATGCACCTaGAGCTGCCTGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATPGRCT*SCLQQL
Trigger: AAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGG...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ATCAACAGGGGCAGCAGAAACTCAGCAAATCGTGGTGTAGAAGCCAGCACAGCGTCTCTAGAGAGGACCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: INRGSRNSANRGVEASTASLERT*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGGTCCTCTCTAGAGA...CGCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTTCTGCTGCCCCTGTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
CDS-3UTR GCA 90 bp CCTCCTTCAGGAAGCTCAGTCTGTACAGGTGACCCACTGCCAGCTCCAAGTCCTTTGTCCGCCGCTGGCTaGTCTGTAACGTTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: PPSGSSVCTGDPLPAPSPLSAAG*SVTFQG
Trigger: CCCTTGAAACGTTACAGAGCAGCCAGCGGCGGACAA...AGGACTTGGAGCTGGCAGTGGGTCACCTGTACAGACTGAGCTTCCTGAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS-3UTR CCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCACCCTGCAGGACAGATaGGATCACAAGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPTLQDR*DHKMMV
Trigger: GACCATCATCTTGTGATCCCATCTGTCCTGCAGGGT...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAGTGTCGGTCCACCTGTaGCAGGGACTGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSVSVHL*QGLYMH
Trigger: GTGCATGTACAGTCCCTGCCACAGGTGGACCGACAC...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR CCA 90 bp CAGCTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATGATAGGAGATCTGGCTaGGCACCCAAGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: QLTRLADSTDAGSIGWAHDRRSG*APKTVS
Trigger: ACTGACAGTCTTGGGTGCCCAGCCAGATCTCCTATC...ATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGATGTGTGTCACACTCTaGGCAGCTAACTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISMCVTL*AANSGL
Trigger: GAGCCCTGAGTTAGCTGCCCAGAGTGTGACACACAT...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACTTCCTGGAAGATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCGTCCTGCAAAGCACTTaGCAGCAGCGGTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TSWKMALSTETASPGGRAVLQST*QQRWKK
Trigger: TTTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGAC...GGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCATCTTCCAGGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAATCCGCACTTCGGCATaGCCAGCACGAGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSIRTSA*PARVST
Trigger: TGTGCTGACTCGTGCTGGCCATGCCGAAGTGCGGAT...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTTCTGTGAAGAACCGCTaGCGGAACATGATCCGCACT +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPSVKNR*RNMIRT
Trigger: AGTGCGGATCATGTTCCGCCAGCGGTTCTTCACAGA...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCTTTGGCTTCACATCTTaGGGAGCAGCATGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIFGFTS*GAAWKP
Trigger: GGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAA...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GGGCACCCAAGACTGTCAGTGTACGGATGCCAACAAGCTGAAGCTGGGTGCTGGTGTCATCCAGGGGTTTaGCTAAGGCCCGAATCACCT +
Preference number: 4 (lower is better)
Translates to: GHPRLSVYGCQQAEAGCWCHPGV*LRPESP
Trigger: AGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACA...CCAGCACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAGTCTTGGGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTTGTCATCCAGGGGTTTaGCTAAGGCCCGAATCACCT +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPCHPGV*LRPESP
Trigger: AGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACA...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp TGGCTGGGCACCCAAGACTGTCAGTGTACGGATGCCAACAAGCTGAAGCTGGGTCGCTCACTTGCCGTCTaGAACACCTCTCTGCGGATA +
Preference number: 4 (lower is better)
Translates to: WLGTQDCQCTDANKLKLGRSLAV*NTSLRI
Trigger: TATCCGCAGAGAGGTGTTCCAGACGGCAAGTGAGCG...ACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAGTCTTGGGTGCCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
3UTR CAA 72 bp CTGGCTGACACTGCTTCCTTGCGCACCAGTCTCTTCTaGTCATCCAGGGGTTTGGCTAAGGCCCGAATCACC +
Preference number: 4 (lower is better)
Translates to: LADTASLRTSLF*SSRGLAKARIT
Trigger: GGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp TGCACTTCCTGGAAGATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGTATAGTCCCTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: CTSWKMALSTETASPGGRYSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAGGGACTATA...CCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCATCTTCCAGGAAGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR TCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACGTACGAGGTGGCTGCTaGAGGCCACAGGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDVRGGC*RPQGRE
Trigger: CTCTCTACCCTGTGGCCTTCAGCAGCCACCTCGTAC...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCGTACGAGGTGGCTGCTaGAGGCCACAGGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAVRGGC*RPQGRE
Trigger: CTCTCTACCCTGTGGCCTTCAGCAGCCACCTCGTAC...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGTCCGTTAGTCAAATTTaGCTCCCCTACACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISSVSQI*LPYTQL
Trigger: GAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGA...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCATCTGTCTGAGGCTCTaGCAGACAGCAATAACGTCA +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPICLRL*QTAITS
Trigger: TGACGTTATTGCTGTCTGTCAGAGCCTCAGACAGAT...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCATCTGTCTGAGGCTCTaGCAGACAGCAATAACGTCA +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPICLRL*QTAITS
Trigger: TGACGTTATTGCTGTCTGTCAGAGCCTCAGACAGAT...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTTTTCTGCCATCTGTCTaGGGCTCTGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPFLPSV*GSDRQQ
Trigger: TTGCTGTCTGTCAGAGCCTCAGACAGATGGCAGAAA...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CACAGATGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCAGAAGAGTGAAGGCCTaGCTACGACAGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: HRCREHWVGSSPLVKFDSRRVKA*LRQGPE
Trigger: CTCTGGGCCCTGTCGTAGTCAGGCCTTCACTCTTCT...GGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGACCGCTGGCGGAACATaGTCCGCACTTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERTAGGT*SALRHG
Trigger: GCCATGCCGAAGTGCGGATCATGTTCCGCCAGCGGT...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACATCCAGTAGAAGAGGCTaGAGGCAGCTGAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATSSRRG*RQLRVE
Trigger: CTCCACCCTCAGCTGCCTTCAGCCTCTTCTACTGGA...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGAGTCTAGGCCAGGACTaGGGGCTCAGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWSLGQD*GLSCQG
Trigger: GCCCTGGCAGCTGAGCCCTCAGTCCTGGCCTAGACT...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp ATAGTCCCTGGAGATGAGGTCATGGACGATGCGGAAGGCCACCAGAAGATTACGAAGCTGGATTGCTCGTaGCCGAGTTCGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: IVPGDEVMDDAEGHQKITKLDCS*PSSGFW
Trigger: CCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTT...CGTAATCTTCTGGTGGCCTTCCGCATCGTCCATGACCTCATCTCCAGGGACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR GCA 90 bp GGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCCAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSSPLVKFDSPTRSSSASQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...GCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAACAGCTGACAAGGCTTaGAGACAGCACAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSTADKA*RQHRCR
Trigger: CCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGT...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCCTGCTGACATTTTTCTaGCATCTGTCTGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPLLTFF*HLSEAL
Trigger: CAGAGCCTCAGACAGATGGCAGAAAAATGTCAGCAG...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTCTGAGGGTGGAGAGCTaGACCACACAGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLLRVES*TTQSGQ
Trigger: CTGCCCTGACTGTGTGGTGCAGCTCTCCACCCTCAG...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGCTGAGGGTGGAGAGCTaGACCACACAGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RMSLQTTPPQRVPGYSPWLRVES*TTQSGQ
Trigger: CTGCCCTGACTGTGTGGTGCAGCTCTCCACCCTCAG...CCAGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAGGCGAGTGAGAGCATaGATGCACTGCAGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKARRVRA*MHCSAA
Trigger: CGCCGCACTGCAGTGCATGCATGCTCTCACTCGCCT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCTGACACTGCTTCCTTaGGCACCAGTCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISLTLLP*APVSSC
Trigger: ACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAG...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAAGGGCCACACTCATATaGACTCACCCCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSRATLI*THPSAA
Trigger: TGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCT...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AGCAGTAAAGGCAGTACATTGCTGGTGACAGAGTCACAGGCCCGGGCAGATGCAAGGGCCACACTCATATaGACTCACCCCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSKGSTLLVTESQARADARATLI*THPSAA
Trigger: TGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCT...TGCATCTGCCCGGGCCTGTGACTCTGTCACCAGCAATGTACTGCCTTTACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGACAGGTAGACAACATCTaGCAGCCCTGGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRQVDNI*QPWSSG
Trigger: CCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTG...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp CACAGATGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCTCCACCCGCTCACTTaGCGTCTGGAACACCTCTCT +
Preference number: 4 (lower is better)
Translates to: HRCREHWVGSSPLVKFDSLHPLT*RLEHLS
Trigger: AGAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAG...GGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACGCACCTGCAGCTGCCTaGAACAGCTTGGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDAPAAA*NSLALG
Trigger: GCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGC...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAGGAGCATTTCAAGGATTGTCCGCCGCTGGCTGCTCTGACTGTGCTTGTGGAAAGATGCACCTGCAGCTaGCTGCAACAGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: QEHFKDCPPLAALTVLVERCTCS*LQQLGT
Trigger: AGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCT...TTCCACAAGCACAGTCAGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCCCGGGCAGATGCACCTaGAGCTGCCTGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAPGRCT*SCLQQL
Trigger: AAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGG...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TCCACCTGTGGCAGGGACTGTACATGCACTTCCTGGAAGATGGCTTTAAGCACATCTCTAGAGAGGACCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: STCGRDCTCTSWKMALSTSLERT*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGGTCCTCTCTAGAGA...TGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCCACAGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441194.5
CDS-3UTR CCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTACCTGTGACAAAAGCTaGATTGCTCGTGCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPTCDKS*IARARV
Trigger: AACTCGGGCACGAGCAATCCAGCTTTTGTCACAGGT...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATAGTCCCTGGAGATGAGGTCATGGACGATGCGGAAGGCCACCAGAAGATTACGCTGGAGATGAGGTCATaGACGATGCGGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: IVPGDEVMDDAEGHQKITLEMRS*TMRKAT
Trigger: GGTGGCCTTCCGCATCGTCCATGACCTCATCTCCAG...CGTAATCTTCTGGTGGCCTTCCGCATCGTCCATGACCTCATCTCCAGGGACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CCA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCTCTCTCTGGATACCATaGGGATCATTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QPWSSGPHSYALTPQQHISLWIP*GSLGGG
Trigger: CCCTCCACCTAATGATCCCCATGGTATCCAGAGAGA...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTACCAGTGAGCACAGCTaGTCCTTGAAGCCATTCAGA +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPTSEHS*SLKPFR
Trigger: TCTGAATGGCTTCAAGGACCAGCTGTGCTCACTGGT...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGGCTGGGCACCCAAGACTGTCAGTGTACGGATGCCAACAAGCTGAAGCTGGGTGATAGGAGATCTGGCTaGGCACCCAAGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: WLGTQDCQCTDANKLKLGDRRSG*APKTVS
Trigger: ACTGACAGTCTTGGGTGCCCAGCCAGATCTCCTATC...ACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAGTCTTGGGTGCCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACAGCTTGGGTACGAGGTaGCTGCTGAAGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDSLGTR*LLKATG
Trigger: CCCTGTGGCCTTCAGCAGCCACCTCGTACCCAAGCT...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCAGCTTGGGTACGAGGTaGCTGCTGAAGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRASLGTR*LLKATG
Trigger: CCCTGTGGCCTTCAGCAGCCACCTCGTACCCAAGCT...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGGCTGGGCACCCAAGACTGTCAGTGTACGGATGCCAACAAGCTGAAGCTGGGTATGTGTGTCACACTCTaGGCAGCTAACTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: WLGTQDCQCTDANKLKLGMCVTL*AANSGL
Trigger: GAGCCCTGAGTTAGCTGCCCAGAGTGTGACACACAT...ACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAGTCTTGGGTGCCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp GGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCCCTGAGGAGCCATCCTaGAATGGCTGGAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSSPLVKFDSPTRSSSASPEEPS*NGWNLL
Trigger: GAGCAGATTCCAGCCATTCCAGGATGGCTCCTCAGG...GCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCACAGGAGCTGAGAGGATaGTATCTGAGCACTAGGGCC +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSQELRG*YLSTRA
Trigger: GGCCCTAGTGCTCAGATACCATCCTCTCAGCTCCTG...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAGGCCCGAATCACCTGTaGTTTGTACGGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATGPNHL*FVRQQH
Trigger: GTGCTGCTGCCGTACAAACCACAGGTGATTCGGGCC...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAGAAACCACTCCCCTCTaGCTGACACTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSETTPL*LTLLPC
Trigger: GCAAGGAAGCAGTGTCAGCCAGAGGGGAGTGGTTTC...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp TGGCTGGGCACCCAAGACTGTCAGTGTACGGATGCCAACAAGCTGAAGCTGGGTAGGATTGTCCGCCGCTaGCTGCTCTGTAACGTTTCA +
Preference number: 4 (lower is better)
Translates to: WLGTQDCQCTDANKLKLGRIVRR*LLCNVS
Trigger: TGAAACGTTACAGAGCAGCCAGCGGCGGACAATCCT...ACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAGTCTTGGGTGCCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS-3UTR CCA 90 bp ATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTATATCAGGTGTACCACTaGGCTCAGCAATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: MALSTETASPGGRATHRLYQVYH*AQQSRK
Trigger: CTTCCTGGATTGCTGAGCCCAGTGGTACACCTGATA...TAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448660.5
3UTR CAA 72 bp TCCTTGCGCACCAGTCTCTTCTTGTCATCCAGGGGTTaGGCTAAGGCCCGAATCACCTGTGGTTTGTACGGC +
Preference number: 4 (lower is better)
Translates to: SLRTSLFLSSRG*AKARITCGLYG
Trigger: GCCGTACAAACCACAGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCGCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp ATTGTAGACTGTGTGTCGGTCCACCTGTGGCAGGGACTGTACATGCACTTCCTGTCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: IVDCVSVHLWQGLYMHFLSRSKV*QWSSTC
Trigger: ACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGA...CAGGAAGTGCATGTACAGTCCCTGCCACAGGTGGACCGACACACAGTCTACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
CDS-3UTR TCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCATATAGTCCCTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSYSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAGGGACTATA...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGGTACGAGGTGGCTGCTaGAGGCCACAGGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERVRGGC*RPQGRE
Trigger: CTCTCTACCCTGTGGCCTTCAGCAGCCACCTCGTAC...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GTTCCTGATGCTTCCAGTGCTGCCACCCTGCAACTCTGGGAATCCTCCTTCAGGTCCGTTAGTCAAATTTaGCTCCCCTACACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VPDASSAATLQLWESSFRSVSQI*LPYTQL
Trigger: GAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGA...CCTGAAGGAGGATTCCCAGAGTTGCAGGGTGGCAGCACTGGAAGCATCAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS-3UTR TCA 90 bp TGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACAGAGGCAGTGTCTCCTTaGCGATGCTGGGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: CREHWVGSSPLVKFDSPTEAVSP*RCWDVL
Trigger: CAACACATCCCAGCATCGTCAAGGAGACACTGCCTC...TGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAGAGGCAGTGTCTCCTTaGCGATGCTGGGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATEAVSP*RCWDVL
Trigger: CAACACATCCCAGCATCGTCAAGGAGACACTGCCTC...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCATGAGTTGGTTCAGCTaGGGGATTTCCACATTTCGA +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPMSWFS*GISTFR
Trigger: TCGAAATGTGGAAATCCCTCAGCTGAACCAACTCAT...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GTCAGCACATCAGTGCAGTCAGACATGAGCAGAGAGAAGCCATCAGCTGCTGCTCCAAAAGCTCCCGCATaGGTTGGTTCAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VSTSVQSDMSREKPSAAAPKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGG...AGCAGCAGCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTGATGTGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGACTGCAGGGTGCTTGTTaGGGAGTCCTGCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRLQGAC*GVLQST
Trigger: AGTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAG...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTAGAAGAGTGAAGGCCTaGCTACGACAGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLRRVKA*LRQGPE
Trigger: CTCTGGGCCCTGTCGTAGTCAGGCCTTCACTCTTCT...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACCCAGAGAAGAAGAGTaGAGGCCTGACTACGACAGG +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATPREEE*RPDYDR
Trigger: CCTGTCGTAGTCAGGCCTTCACTCTTCTTCTCTGGG...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCACAGTGCAGTCAGACATaGGCAGAGAGAAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSQCSQT*AERSHQ
Trigger: CTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTG...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGACCGCTGGCGGAACATaGTCCGCACTTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWTAGGT*SALRHG
Trigger: GCCATGCCGAAGTGCGGATCATGTTCCGCCAGCGGT...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCATCCAGTAGAAGAGGCTaGAGGCAGCTGAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKASSRRG*RQLRVE
Trigger: CTCCACCCTCAGCTGCCTTCAGCCTCTTCTACTGGA...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAAGTAGTTTGGCTTCACATCTTGGGGAGCAGCATGGAAGCCCTGGACCAAAGCACGAGGGTGTCCACGTaGAGACTCATGACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: QVVWLHILGSSMEALDQSTRVST*RLMTWG
Trigger: ACCCCAAGTCATGAGTCTTCACGTGGACACCCTCGT...GCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAACTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAACGAGGGTGTCCACGTaGAGACTCATGACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATTRVST*RLMTWG
Trigger: ACCCCAAGTCATGAGTCTTCACGTGGACACCCTCGT...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAGGTTCAGAAACTTGGTaGCGAGGGTGTCCACGTGAA +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSGSETW*RGCPRE
Trigger: TTCACGTGGACACCCTCGTCACCAAGTTTCTGAACC...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGGGTGGGCAGGCGAGTaGGAGCATGCATGCACTGCA +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRGWAGE*EHACTA
Trigger: TGCAGTGCATGCATGCTCTCACTCGCCTGCCCACCC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAGGGTGGGCAGGCGAGTaGGAGCATGCATGCACTGCA +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWEGWAGE*EHACTA
Trigger: TGCAGTGCATGCATGCTCTCACTCGCCTGCCCACCC...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp CACACACAGGCTAAGTGCCTTCAAACCCTGCAGGACAGATGGGATCACAAGATGAAGCTGGATTGCTCGTaGCCGAGTTCGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HTQAKCLQTLQDRWDHKMKLDCS*PSSGFW
Trigger: CCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTT...CATCTTGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR GCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTAAGCTGGATTGCTCGTaGCCGAGTTCGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLKLDCS*PSSGFW
Trigger: CCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTT...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGCAGTAAAGGCAGTACATTGCTGGTGACAGAGTCACAGGCCCGGGCAGATGCACACACACAGGCTAAGTaGCTTCAAACCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SSKGSTLLVTESQARADAHTQAK*LQTLQD
Trigger: GTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG...TGCATCTGCCCGGGCCTGTGACTCTGTCACCAGCAATGTACTGCCTTTACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCCAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGCAGCTCCACAGCTGACAAGGCTTaGAGACAGCACAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: HWVGSSPLVKFDSPTRSSTADKA*RQHRCR
Trigger: CCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGT...GGAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCACTTGTTGAGGAGTCCTaGAAAGCACTTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSLVEES*KALGSS
Trigger: GCTGCTGCCAAGTGCTTTGCAGGACTCCTCAACAAG...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAAGGAATTCATCCAGCTaGTGCCCTGCAGGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRRNSSS*CPAGCL
Trigger: CAAGCACCCTGCAGGGCAGCAGCTGGATGAATTCCT...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCTGAGGGTGGAGAGCTaGACCACACAGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERLRVES*TTQSGQ
Trigger: CTGCCCTGACTGTGTGGTGCAGCTCTCCACCCTCAG...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTAGAGCATGCATGCACTaGAGTGCGGCGATCCGGACA +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLRACMH*SAAIRT
Trigger: TGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCT...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGAGGCGAGTGAGAGCATaGATGCACTGCAGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERRRVRA*MHCSAA
Trigger: CGCCGCACTGCAGTGCATGCATGCTCTCACTCGCCT...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSDQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGGTAGACAACATCTaGCAGCCCTGGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDQVDNI*QPWSSG
Trigger: CCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTG...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCCAGGTAGACAACATCTaGCAGCCCTGGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAQVDNI*QPWSSG
Trigger: CCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTG...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TTGATACAGCTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGGTTCACACAGGTGGTaGCTGCAGTCCTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: LIQLTRLADSTDAGSIGWGSHRW*LQSCRM
Trigger: CATTCTACAGGACTGCAGGCACCACCTGTGTGAACC...CCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp CCAGCTCCAAGTCCTCATAAGATAGGAGATCTGGCTGGGCACCCAAGACTGTCAAGATGCACCTGCAGCTaGCTGCAACAGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: PAPSPHKIGDLAGHPRLSRCTCS*LQQLGT
Trigger: AGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCT...TGACAGTCTTGGGTGCCCAGCCAGATCTCCTATCTTATGAGGACTTGGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCCGGGCAGATGCACCTaGAGCTGCCTGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERPGRCT*SCLQQL
Trigger: AAGCTGTTGCAGGCAGCTGCAGGTGCATCTGCCCGG...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GCAAGGTGTGACAGTGGAGTAGCACCTGTGACAAAAGCTGGATTGCTCGTGCCCCGGTCCACCTGTACATaGACTTCCTGGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: ARCDSGVAPVTKAGLLVPRSTCT*TSWKMA
Trigger: AGCCATCTTCCAGGAAGTGCATGTACAGGTGGACCG...GGGCACGAGCAATCCAGCTTTTGTCACAGGTGCTACTCCACTGTCACACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCACTGGAGATGAGGTCATaGACGATGCGGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKALEMRS*TMRKAT
Trigger: GGTGGCCTTCCGCATCGTCCATGACCTCATCTCCAG...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCCTGGAGATGAGGTCATaGACGATGCGGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRALEMRS*TMRKAT
Trigger: GGTGGCCTTCCGCATCGTCCATGACCTCATCTCCAG...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCTTGGGTACGAGGTGGCACCAGTGAGCACAGCTaGTCCTTGAAGCCATTCAGA +
Preference number: 4 (lower is better)
Translates to: SNLTPLHAAPQRAWVRGGTSEHS*SLKPFR
Trigger: TCTGAATGGCTTCAAGGACCAGCTGTGCTCACTGGT...GCCACCTCGTACCCAAGCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGAGCTTGGGTACGAGGTaGCTGCTGAAGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERSLGTR*LLKATG
Trigger: CCCTGTGGCCTTCAGCAGCCACCTCGTACCCAAGCT...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGATGCCGGGAGCATTaGGTGGGCTCATCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETRCREH*VGSSPL
Trigger: TAACGGAGATGAGCCCACCCAATGCTCCCGGCATCT...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGACCTGAGGAGCCATCCTaGAATGGCTGGAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRPEEPS*NGWNLL
Trigger: GAGCAGATTCCAGCCATTCCAGGATGGCTCCTCAGG...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCCCTGAGGAGCCATCCTaGAATGGCTGGAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETPEEPS*NGWNLL
Trigger: GAGCAGATTCCAGCCATTCCAGGATGGCTCCTCAGG...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAATCCGCACTTCGGCATaGCCAGCACGAGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAIRTSA*PARVST
Trigger: TGTGCTGACTCGTGCTGGCCATGCCGAAGTGCGGAT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAGCAAGGAAAGAAGCGTaGGCAGCTCTGGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSARKEA*AALARV
Trigger: TACTCTTGCCAGAGCTGCCCACGCTTCTTTCCTTGC...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCGAAACCACTCCCCTCTaGCTGACACTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETETTPL*LTLLPC
Trigger: GCAAGGAAGCAGTGTCAGCCAGAGGGGAGTGGTTTC...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAGAAACCACTCCCCTCTaGCTGACACTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATETTPL*LTLLPC
Trigger: GCAAGGAAGCAGTGTCAGCCAGAGGGGAGTGGTTTC...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp CATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGCAGCTCCGAAACCACTCCCCTCTaGCTGACACTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: HWVGSSPLVKFDSPTRSSETTPL*LTLLPC
Trigger: GCAAGGAAGCAGTGTCAGCCAGAGGGGAGTGGTTTC...GGAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCAACATCTGCCAGCCCTaGTCCTCAGGGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRANICQP*SSGPHS
Trigger: TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTT...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTAACATCTGCCAGCCCTaGTCCTCAGGGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLNICQP*SSGPHS
Trigger: TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTT...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCCACGCAGTCAGGGAGTaGAGGGCCGCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLHAVRE*RAARPS
Trigger: AGAGGGCCTGGCGGCCCTCCACTCCCTGACTGCGTG...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCGATCCGGACAGCCGTaGGCAGCTCTGGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERRSGQP*AALARV
Trigger: TACTCTTGCCAGAGCTGCCCACGGCTGTCCGGATCG...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444411.5
3UTR CAA 72 bp TGCTTGTGGAACTGTTCCAGCAGTAAAGGCAGTACATaGCTGGTGACAGAGTCACAGGCCCGGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: CLWNCSSSKGST*LVTESQARADA
Trigger: TGCATCTGCCCGGGCCTGTGACTCTGTCACCAGCAATGTACTGCCTTTACTGCTGGAACAGTTCCACAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CAA 72 bp TGCCAGAGATGCTGCAGCAGCAGAGGCAGTGTCTCCTaGACGATGCTGGGATGTGTTGATACAGCTGACAAG +
Preference number: 4 (lower is better)
Translates to: CQRCCSSRGSVS*TMLGCVDTADK
Trigger: CTTGTCAGCTGTATCAACACATCCCAGCATCGTCAAGGAGACACTGCCTCTGCTGCTGCAGCATCTCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CAA 72 bp GTGGCAGCAGCTCAGTTCCAAAAGCTCCCGCATGAGTaGGTTCAGCTGAGGGATTTCCACATTTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VAAAQFQKLPHE*VQLRDFHISRQ
Trigger: CTGCCTCGAAATGTGGAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGGAACTGAGCTGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp CCAGCTCCAAGTCCTCATAAGATAGGAGATCTGGCTGGGCACCCAAGACTGTCAGATGGGATCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: PAPSPHKIGDLAGHPRLSDGITR*WSFSRF
Trigger: GAACCGGCTGAAGGACCATCATCTTGTGATCCCATC...TGACAGTCTTGGGTGCCCAGCCAGATCTCCTATCTTATGAGGACTTGGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCTATAGTCCCTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETYSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAGGGACTATA...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TCGGTCCACCTGTGGCAGGGACTGTACATGCACTTCCTGGAAGATGGCTTTAAGCGCGAAGACTCAGGATaGGGTCTTCTCTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: SVHLWQGLYMHFLEDGFKREDSG*GLLSGY
Trigger: GTATCCAGAGAGAAGACCTCATCCTGAGTCTTCGCG...CTTAAAGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCCACAGGTGGACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441194.5
CDS-3UTR TCA 90 bp TTGATACAGCTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGGTCTGTTAGAGCCATaGATACCAGTGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LIQLTRLADSTDAGSIGWGLLEP*IPVSTA
Trigger: AGCTGTGCTCACTGGTATTCATGGCTCTAACAGACC...CCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR TCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTGAGGCAGTGTCTCCTTaGCGATGCTGGGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLEAVSP*RCWDVL
Trigger: CAACACATCCCAGCATCGTCAAGGAGACACTGCCTC...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCACCAAAAGCTCCCGCATaGGTTGGTTCAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAPKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGG...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCTGCAGGGTGCTTGTTaGGGAGTCCTGCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDLQGAC*GVLQST
Trigger: AGTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAG...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCACCCAGAGAAGAAGAGTaGAGGCCTGACTACGACAGG +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAPREEE*RPDYDR
Trigger: CCTGTCGTAGTCAGGCCTTCACTCTTCTTCTCTGGG...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATAGTCCCTGGAGATGAGGTCATGGACGATGCGGAAGGCCACCAGAAGATTACGCAGTGCAGTCAGACATaGGCAGAGAGAAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: IVPGDEVMDDAEGHQKITQCSQT*AERSHQ
Trigger: CTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTG...CGTAATCTTCTGGTGGCCTTCCGCATCGTCCATGACCTCATCTCCAGGGACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTACGAGGGTGTCCACGTaGAGACTCATGACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLTRVST*RLMTWG
Trigger: ACCCCAAGTCATGAGTCTTCACGTGGACACCCTCGT...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATCCCACGACGAAGTCGTaGACGAGGCCCCATAGGGCA +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYPTTKS*TRPHRA
Trigger: TGCCCTATGGGGCCTCGTGCACGACTTCGTCGTGGG...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ACCTGGATGAAGCCAAAGGTGAAGTCAGCTCCTAGGCTCTTTAGCTCTTCTTCCGCCAGATTTCACATCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TWMKPKVKSAPRLFSSSSARFHI*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGATGTGAAATCTGGC...GGAAGAAGAGCTAAAGAGCCTAGGAGCTGACTTCACCTTTGGCTTCATCCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448660.5
CDS-3UTR GCA 90 bp GAGATGAGGTCATGGACGATGCGGAAGGCCACCAGAAGATTACGGGGATCCTTTCACACACAGGCTAAGTaGCTTCAAACCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: EMRSWTMRKATRRLRGSFHTQAK*LQTLQD
Trigger: GTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG...AAAGGATCCCCGTAATCTTCTGGTGGCCTTCCGCATCGTCCATGACCTCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR GCA 90 bp ATCAACAGGGGCAGCAGAAACTCAGCAAATCGTGGTGTAGAAGCCAGCACAGCGCTGTCAGTGTACGGATaGCAACAAGCTGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: INRGSRNSANRGVEASTALSVYG*QQAEAG
Trigger: CCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAG...CGCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTTCTGCTGCCCCTGTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp TGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACTGTCAGTGTACGGATaGCAACAAGCTGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CREHWVGSSPLVKFDSPTLSVYG*QQAEAG
Trigger: CCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAG...TGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR GCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGTGCAGACAGCACAGATaGCGGGAGCATTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWCRQHR*REHWVG
Trigger: GCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCA...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACACAGCTGACAAGGCTTaGAGACAGCACAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDTADKA*RQHRCR
Trigger: CCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGT...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACATTCACTTGCCAGAGATaGTGCAGCAGCAGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATFTCQR*CSSRGS
Trigger: ACTGCCTCTGCTGCTGCAGCATCTCTGGCAAGTGAA...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATGCAATCAGCCGCCTCTaGCCTGAGGAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYAISRL*PEEPSW
Trigger: CCAGGATGGCTCCTCAGGGCAGAGGCGGCTGATTGC...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAGGAATTCATCCAGCTaGTGCCCTGCAGGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKARNSSS*CPAGCL
Trigger: CAAGCACCCTGCAGGGCAGCAGCTGGATGAATTCCT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGCTGAGGGTGGAGAGCTaGACCACACAGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRLRVES*TTQSGQ
Trigger: CTGCCCTGACTGTGTGGTGCAGCTCTCCACCCTCAG...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGGGATTTCCACATTTCGAGGCAGGGAGCAGACAAAGGCCATAAGCAGTGCAATATGCATGCACTGCAGTaGGGCGATCCGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: RDFHISRQGADKGHKQCNMHALQ*GDPDSH
Trigger: ATGGCTGTCCGGATCGCCGCACTGCAGTGCATGCAT...ATTGCACTGCTTATGGCCTTTGTCTGCTCCCTGCCTCGAAATGTGGAAATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACAGGGCCACACTCATATaGACTCACCCCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDRATLI*THPSAA
Trigger: TGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCT...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCAGATGCACCTGCAGCTaGCTGCAACAGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRARCTCS*LQQLGT
Trigger: AGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCT...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAGATGCACCTGCAGCTaGCTGCAACAGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKARCTCS*LQQLGT
Trigger: AGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TTGATACAGCTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGACCCTGCAGGACAGATaGGATCACAAGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: LIQLTRLADSTDAGSIGWTLQDR*DHKMMV
Trigger: GACCATCATCTTGTGATCCCATCTGTCCTGCAGGGT...CCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGTATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAACCCTGCAGGACAGATaGGATCACAAGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSTLQDR*DHKMMV
Trigger: GACCATCATCTTGTGATCCCATCTGTCCTGCAGGGT...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCTGTACATGCACTTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACA...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGGTGTCGGTCCACCTGTaGCAGGGACTGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERVSVHL*QGLYMH
Trigger: GTGCATGTACAGTCCCTGCCACAGGTGGACCGACAC...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCATCCCCATCCATCACCTaGATGAAGCCAAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSSPSIT*MKPKVK
Trigger: CTTCACCTTTGGCTTCATCCAGGTGATGGATGGGGA...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGAGACTGGAGATGAGGTCATaGACGATGCGGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: MSLQTTPPQRVPGYSPWRLEMRS*TMRKAT
Trigger: GGTGGCCTTCCGCATCGTCCATGACCTCATCTCCAG...TCTCCAGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCGTAGAGAATCCAACTTaGCACTCAGAACCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPVENPT*HSEPQN
Trigger: ATTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTAC...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCGATAGGAGATCTGGCTaGGCACCCAAGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETDRRSG*APKTVS
Trigger: ACTGACAGTCTTGGGTGCCCAGCCAGATCTCCTATC...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGGTATAGCTGTCTGGTaGAAATACCAGCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISGIAVW*KYQQLS
Trigger: TGAGAGTTGCTGGTATTTCCACCAGACAGCTATACC...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACTTCCTGGAAGATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCGGTATAGCTGTCTGGTaGAAATACCAGCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: TSWKMALSTETASPGGRAGIAVW*KYQQLS
Trigger: TGAGAGTTGCTGGTATTTCCACCAGACAGCTATACC...GGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCATCTTCCAGGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAAACTCAGGGCTCAGGTaGGTTGTAGCAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATNSGLR*VVAVPM
Trigger: CATTGGCACTGCTACAACCCACCTGAGCCCTGAGTT...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTCCTGAGGAGCCATCCTaGAATGGCTGGAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLPEEPS*NGWNLL
Trigger: GAGCAGATTCCAGCCATTCCAGGATGGCTCCTCAGG...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAGTCCTGCAAAGCACTTaGCAGCAGCGGTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATVLQST*QQRWKK
Trigger: TTTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGAC...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCCAGGAGCTGAGAGGATaGTATCTGAGCACTAGGGCC +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAQELRG*YLSTRA
Trigger: GGCCCTAGTGCTCAGATACCATCCTCTCAGCTCCTG...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACATCTGTGAAGAACCGCTaGCGGAACATGATCCGCACT +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATSVKNR*RNMIRT
Trigger: AGTGCGGATCATGTTCCGCCAGCGGTTCTTCACAGA...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGATCTGTGAAGAACCGCTaGCGGAACATGATCCGCACT +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRSVKNR*RNMIRT
Trigger: AGTGCGGATCATGTTCCGCCAGCGGTTCTTCACAGA...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTGAAACCACTCCCCTCTaGCTGACACTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLETTPL*LTLLPC
Trigger: GCAAGGAAGCAGTGTCAGCCAGAGGGGAGTGGTTTC...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTCCTGAAATGGGGCGGTaGCACCGAGAGGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIPEMGR*HREGRR
Trigger: CCGCCTTCCCTCTCGGTGCCACCGCCCCATTTCAGG...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS-3UTR CCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAAGCCGTGGGCAGCTCTaGCAAGAGTACAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLSRGQL*QEYRLG
Trigger: CCCAAGCCTGTACTCTTGCCAGAGCTGCCCACGGCT...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444411.5
CDS-3UTR CCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATGGCCGTGGGCAGCTCTaGCAAGAGTACAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYGRGQL*QEYRLG
Trigger: CCCAAGCCTGTACTCTTGCCAGAGCTGCCCACGGCC...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434538.5
3UTR CAA 72 bp CTGCTCGGGAAGCTGTTTTCAGGCAGAAAGGACACGTaGCCATCCAAGAAGAGGGGCACAATGTGTGTCACA +
Preference number: 4 (lower is better)
Translates to: LLGKLFSGRKDT*PSKKRGTMCVT
Trigger: TGTGACACACATTGTGCCCCTCTTCTTGGATGGCAACGTGTCCTTTCTGCCTGAAAACAGCTTCCCGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCGATGGGATCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRADGITR*WSFSRF
Trigger: GAACCGGCTGAAGGACCATCATCTTGTGATCCCATC...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GGCAGGGACTGTACATGCACTTCCTGGAAGATGGCTTTAAGCACAGAAACAGCCGATGGGATCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GRDCTCTSWKMALSTETADGITR*WSFSRF
Trigger: GAACCGGCTGAAGGACCATCATCTTGTGATCCCATC...GGCTGTTTCTGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
CDS-3UTR TCA 90 bp CCAAAGGTGAAGTCAGCTCCTAGGCTCTTTAGCTCTTCTTCCCGGGTTCGCATAGATGGGATCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: PKVKSAPRLFSSSSRVRIDGITR*WSFSRF
Trigger: GAACCGGCTGAAGGACCATCATCTTGTGATCCCATC...TATGCGAACCCGGGAAGAAGAGCTAAAGAGCCTAGGAGCTGACTTCACCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR TCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTTATAGTCCCTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLYSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAGGGACTATA...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCCGCGAAGACTCAGGATaGGGTCTTCTCTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAREDSG*GLLSGY
Trigger: GTATCCAGAGAGAAGACCTCATCCTGAGTCTTCGCG...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCACGCGAAGACTCAGGATaGGGTCTTCTCTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAREDSG*GLLSGY
Trigger: GTATCCAGAGAGAAGACCTCATCCTGAGTCTTCGCG...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAGCACAGCTGGTCCTTaGAGCCATTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKASTAGP*SHSEAF
Trigger: AAAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACAGCACAGCTGGTCCTTaGAGCCATTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDSTAGP*SHSEAF
Trigger: AAAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCT...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCTCAGTCTGTACAGGTaGCCCACTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWLSLYR*PTASSK
Trigger: CTTGGAGCTGGCAGTGGGTCACCTGTACAGACTGAG...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGCTCAGTCTGTACAGGTaGCCCACTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRLSLYR*PTASSK
Trigger: CTTGGAGCTGGCAGTGGGTCACCTGTACAGACTGAG...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGAGCAGCCAGGGTTCCTaGTGCTTCCAGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVSSQGS*CFQCCH
Trigger: GTGGCAGCACTGGAAGCATCAGGAACCCTGGCTGCT...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATGTACGAGGTGGCTGCTaGAGGCCACAGGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYVRGGC*RPQGRE
Trigger: CTCTCTACCCTGTGGCCTTCAGCAGCCACCTCGTAC...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATCAACAGGGGCAGCAGAAACTCAGCAAATCGTGGTGTAGAAGCCAGCACAGCGTTTCTGCCATCTGTCTaGGGCTCTGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: INRGSRNSANRGVEASTAFLPSV*GSDRQQ
Trigger: TTGCTGTCTGTCAGAGCCTCAGACAGATGGCAGAAA...CGCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTTCTGCTGCCCCTGTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCATACTTTTCTCAGAACTaGGGGCTCCTTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSYFSQN*GLLLWH
Trigger: ATGCCAGAGAAGGAGCCCTCAGTTCTGAGAAAAGTA...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCTGCAGGGTGCTTGTTaGGGAGTCCTGCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERLQGAC*GVLQST
Trigger: AGTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAG...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGAGATCCCAGAGAAGAAGAGTaGAGGCCTGACTACGACAGG +
Preference number: 4 (lower is better)
Translates to: CHFKQLLHKGSQAIVPGDPREEE*RPDYDR
Trigger: CCTGTCGTAGTCAGGCCTTCACTCTTCTTCTCTGGG...ATCTCCAGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAACCGCTGGCGGAACATaGTCCGCACTTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSTAGGT*SALRHG
Trigger: GCCATGCCGAAGTGCGGATCATGTTCCGCCAGCGGT...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGGCACATTATCTGTaGAGAACCGCTGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDQAHYL*RTAGGT
Trigger: TGTTCCGCCAGCGGTTCTTCACAGATAATGTGCCTG...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCACAGGCACATTATCTGTaGAGAACCGCTGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAQAHYL*RTAGGT
Trigger: TGTTCCGCCAGCGGTTCTTCACAGATAATGTGCCTG...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGGGTGGGCAGGCGAGTaGGAGCATGCATGCACTGCA +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLGWAGE*EHACTA
Trigger: TGCAGTGCATGCATGCTCTCACTCGCCTGCCCACCC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCATATCGCCCCTTTTCTaGCATATAAATGCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LVLRATLICTHPSAAYRPISPLF*HINARD
Trigger: GTCTCTTGCATTTATATGTCAGAAAAGGGGCGATAT...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGCACGGGGGAAGCCAATaGGAAAATCAGGCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVHGGSQ*ENQAQP
Trigger: GGGCTGGGCCTGATTTTCTCATTGGCTTCCCCCGTG...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370782.6
CDS-3UTR TCA 90 bp TGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGTTTCAAGGGGTACTaGCTGTGCTTGTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: CREHWVGSSPLVKFDSPTRFKGY*LCLWNC
Trigger: ACAGTTCCACAAGCACAGTCAGTACCCCTTGAAACG...TGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS-3UTR GCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCAGATTTCACATCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRARFHI*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGATGTGAAATCTGGC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR GCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGCCAGATTTCACATCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWARFHI*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGATGTGAAATCTGGC...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR GCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAAGTGCCTTCAAACCCTaGAGGACAGATGGGATCACA +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRSAFKP*RTDGIT
Trigger: TGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACT...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGCAGCTCCAGTGCCTTCAAACCCTaGAGGACAGATGGGATCACA +
Preference number: 4 (lower is better)
Translates to: HWVGSSPLVKFDSPTRSSSAFKP*RTDGIT
Trigger: TGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACT...GGAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCCACACACAGGCTAAGTaGCTTCAAACCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAHTQAK*LQTLQD
Trigger: GTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTGGCAGGGACTGTACATaGACTTCCTGGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLGRDCT*TSWKMA
Trigger: AGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCC...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR GCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCACTGTCAGTGTACGGATaGCAACAAGCTGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKALSVYG*QQAEAG
Trigger: CCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAG...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTTTCACTTGCCAGAGATaGTGCAGCAGCAGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLFTCQR*CSSRGS
Trigger: ACTGCCTCTGCTGCTGCAGCATCTCTGGCAAGTGAA...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGGAATGGCTGGAATCTaGTCGGGAAGCTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRGMAGI*SGSCFQ
Trigger: CTGAAAACAGCTTCCCGAGCAGATTCCAGCCATTCC...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGCAATCAGCCGCCTCTaGCCTGAGGAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLAISRL*PEEPSW
Trigger: CCAGGATGGCTCCTCAGGGCAGAGGCGGCTGATTGC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAATCCAGCTGCTGCCCTaGAGGGTGCTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWEIQLLP*RVLVEE
Trigger: CTCCTCAACAAGCACCCTGCAGGGCAGCAGCTGGAT...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGATGCATGCACTGCAGTaGGGCGATCCGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRMHALQ*GDPDSH
Trigger: ATGGCTGTCCGGATCGCCGCACTGCAGTGCATGCAT...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGAGAGCATGCATGCACTaGAGTGCGGCGATCCGGACA +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWRACMH*SAAIRT
Trigger: TGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCT...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGACTGACACTGCTTCCTTaGGCACCAGTCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRLTLLP*APVSSC
Trigger: ACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAG...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTTTCTTTGTACAGCCATaGAACAGAGGCCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPFFVQP*NRGLAF
Trigger: AAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp CCAAAGGTGAAGTCAGCTCCTAGGCTCTTTAGCTCTTCTTCCCGGGTTCGCATAGGTTCACACAGGTGGTaGCTGCAGTCCTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: PKVKSAPRLFSSSSRVRIGSHRW*LQSCRM
Trigger: CATTCTACAGGACTGCAGGCACCACCTGTGTGAACC...TATGCGAACCCGGGAAGAAGAGCTAAAGAGCCTAGGAGCTGACTTCACCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAACAGGCCCGGGCAGATaGACCTGCAGCTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSTGPGR*TCSCLQ
Trigger: TTGCAGGCAGCTGCAGGTGCATCTGCCCGGGCCTGT...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTATGTACATGCACTTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: MALSTETASPGGRATHRLCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACA...TAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CCA 90 bp AGGGAAATAACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTGTGTCGGTCCACCTGTaGCAGGGACTGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: REITGCHFKQLLHKGSQAVSVHL*QGLYMH
Trigger: GTGCATGTACAGTCCCTGCCACAGGTGGACCGACAC...AGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGTTATTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CCA 90 bp TGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACATCTCTCTGGATACCATaGGGATCATTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CREHWVGSSPLVKFDSPTSLWIP*GSLGGG
Trigger: CCCTCCACCTAATGATCCCCATGGTATCCAGAGAGA...TGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp GATGAGGTCATGGACGATGCGGAAGGCCACCAGAAGATTACGGGGATCCTTTTCTCTCTCTGGATACCATaGGGATCATTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: DEVMDDAEGHQKITGILFSLWIP*GSLGGG
Trigger: CCCTCCACCTAATGATCCCCATGGTATCCAGAGAGA...GAAAAGGATCCCCGTAATCTTCTGGTGGCCTTCCGCATCGTCCATGACCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
CDS-3UTR CCA 90 bp GGGGCACAATGTGTGTCACACTCTGGGCAGCTAACTCAGGGCTCAGGTGGGTTGATGAGGTCTTCTCTCTaGATACCATGGGGATCATTA +
Preference number: 4 (lower is better)
Translates to: GAQCVSHSGQLTQGSGGLMRSSL*IPWGSL
Trigger: TAATGATCCCCATGGTATCCAGAGAGAAGACCTCAT...CAACCCACCTGAGCCCTGAGTTAGCTGCCCAGAGTGTGACACACATTGTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGAGGATTGTCCGCCGCTaGCTGCTCTCTCTGCGGATA +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWRIVRR*LLSLRI
Trigger: TATCCGCAGAGAGAGCAGCCAGCGGCGGACAATCCT...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327238.14
CDS-3UTR CCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCCTGCAAAGCACTTaGCAGCAGCGGTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAVLQST*QQRWKK
Trigger: TTTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGAC...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGATCCGCACTTCGGCATaGCCAGCACGAGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWIRTSA*PARVST
Trigger: TGTGCTGACTCGTGCTGGCCATGCCGAAGTGCGGAT...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGTCTGTGAAGAACCGCTaGCGGAACATGATCCGCACT +
Preference number: 4 (lower is better)
Translates to: RMSLQTTPPQRVPGYSPWSVKNR*RNMIRT
Trigger: AGTGCGGATCATGTTCCGCCAGCGGTTCTTCACAGA...CCAGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGTCTTGGGGAGCAGCATaGAAGCCCTGGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERSWGAA*KPWTKA
Trigger: TGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGA...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACTTTGGCTTCACATCTTaGGGAGCAGCATGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDFGFTS*GAAWKP
Trigger: GGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAA...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTTTTGGCTTCACATCTTaGGGAGCAGCATGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLFGFTS*GAAWKP
Trigger: GGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAA...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAACCCTTCAAGTAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSTLQVV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGT...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGCAAGGAAAGAAGCGTaGGCAGCTCTGGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAARKEA*AALARV
Trigger: TACTCTTGCCAGAGCTGCCCACGCTTCTTTCCTTGC...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAGGCCCGAATCACCTGTaGTTTGTACGGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLGPNHL*FVRQQH
Trigger: GTGCTGCTGCCGTACAAACCACAGGTGATTCGGGCC...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACTGTCATCCAGGGGTTTaGCTAAGGCCCGAATCACCT +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDCHPGV*LRPESP
Trigger: AGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACA...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAATCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWESRSKV*QWSSTC
Trigger: ACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGA...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTATCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLSRSKV*QWSSTC
Trigger: ACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGA...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGTCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWSRSKV*QWSSTC
Trigger: ACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGA...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ACCTGGATGAAGCCAAAGGTGAAGTCAGCTCCTAGGCTCTTTAGCTCTTCTTCCTATAGTCCCTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: TWMKPKVKSAPRLFSSSSYSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAGGGACTATA...GGAAGAAGAGCTAAAGAGCCTAGGAGCTGACTTCACCTTTGGCTTCATCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR TCA 90 bp AGGGATTTCCACATTTCGAGGCAGGGAGCAGACAAAGGCCATAAGCAGTGCAATAGCACAGCTGGTCCTTaGAGCCATTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RDFHISRQGADKGHKQCNSTAGP*SHSEAF
Trigger: AAAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCT...ATTGCACTGCTTATGGCCTTTGTCTGCTCCCTGCCTCGAAATGTGGAAATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGCAGCCAGGGTTCCTaGTGCTTCCAGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLSSQGS*CFQCCH
Trigger: GTGGCAGCACTGGAAGCATCAGGAACCCTGGCTGCT...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTGTACGAGGTGGCTGCTaGAGGCCACAGGGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIVRGGC*RPQGRE
Trigger: CTCTCTACCCTGTGGCCTTCAGCAGCCACCTCGTAC...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCATTTCTGCCATCTGTCTaGGGCTCTGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAFLPSV*GSDRQQ
Trigger: TTGCTGTCTGTCAGAGCCTCAGACAGATGGCAGAAA...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTTTTCTGCCATCTGTCTaGGGCTCTGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLFLPSV*GSDRQQ
Trigger: TTGCTGTCTGTCAGAGCCTCAGACAGATGGCAGAAA...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTCTCTCAGGGTCCTGCTaGCATTTTTCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLLSGSC*HFSAIC
Trigger: ACAGATGGCAGAAAAATGTCAGCAGGACCCTGAGAG...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACATACTTTTCTCAGAACTaGGGGCTCCTTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATYFSQN*GLLLWH
Trigger: ATGCCAGAGAAGGAGCCCTCAGTTCTGAGAAAAGTA...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAATGAGTTGGTTCAGCTaGGGGATTTCCACATTTCGA +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSMSWFS*GISTFR
Trigger: TCGAAATGTGGAAATCCCTCAGCTGAACCAACTCAT...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCCAAAAGCTCCCGCATaGGTTGGTTCAGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWPKAPA*VGSAEG
Trigger: TCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGG...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAACTGCAGGGTGCTTGTTaGGGAGTCCTGCAAAGCACT +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWELQGAC*GVLQST
Trigger: AGTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAG...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTACCCAGAGAAGAAGAGTaGAGGCCTGACTACGACAGG +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLPREEE*RPDYDR
Trigger: CCTGTCGTAGTCAGGCCTTCACTCTTCTTCTCTGGG...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCCCAGAGAAGAAGAGTaGAGGCCTGACTACGACAGG +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWPREEE*RPDYDR
Trigger: CCTGTCGTAGTCAGGCCTTCACTCTTCTTCTCTGGG...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACCGCTGGCGGAACATaGTCCGCACTTCGGCATGGC +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFTAGGT*SALRHG
Trigger: GCCATGCCGAAGTGCGGATCATGTTCCGCCAGCGGT...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGTCCAGTAGAAGAGGCTaGAGGCAGCTGAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVSSRRG*RQLRVE
Trigger: CTCCACCCTCAGCTGCCTTCAGCCTCTTCTACTGGA...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCCCACGTGAAGACTCATaGCTTGGGGTGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: NRMSLQTTPPQRVPGYSPPREDS*LGVLPV
Trigger: TACTGGAAGCACCCCAAGTCATGAGTCTTCACGTGG...GGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGACGAGGGTGTCCACGTaGAGACTCATGACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWTRVST*RLMTWG
Trigger: ACCCCAAGTCATGAGTCTTCACGTGGACACCCTCGT...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTAGTCTAGGCCAGGACTaGGGGCTCAGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSISLGQD*GLSCQG
Trigger: GCCCTGGCAGCTGAGCCCTCAGTCCTGGCCTAGACT...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCCAGATTTCACATCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVARFHI*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGATGTGAAATCTGGC...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR GCA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTGTAACACTGTATAGTTaGCAGATTTCACATCTGCAG +
Preference number: 4 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPVTLYS*QISHLQ
Trigger: CTGCAGATGTGAAATCTGGCAACTATACAGTGTTAC...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR GCA 90 bp GGCAGGGCCACACACAGGCTAAGTGCCTTCAAACCCTGCAGGACAGATGGGATCGTAACACTGTATAGTTaGCAGATTTCACATCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRATHRLSAFKPCRTDGIVTLYS*QISHLQ
Trigger: CTGCAGATGTGAAATCTGGCAACTATACAGTGTTAC...GATCCCATCTGTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTGGCCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448660.5
CDS-3UTR GCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGAAGCTGGATTGCTCGTaGCCGAGTTCGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVKLDCS*PSSGFW
Trigger: CCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTT...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCACACACAGGCTAAGTaGCTTCAAACCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERHTQAK*LQTLQD
Trigger: GTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGGGCAGGGACTGTACATaGACTTCCTGGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERGRDCT*TSWKMA
Trigger: AGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCC...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR GCA 90 bp ATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGAGAGGCAGGGACTGTACATaGACTTCCTGGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: MSLQTTPPQRVPGYSPWRGRDCT*TSWKMA
Trigger: AGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCC...TCTCCAGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
CDS-3UTR GCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCATGCAGACAGCACAGATaGCGGGAGCATTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSCRQHR*REHWVG
Trigger: GCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCA...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGACTGCTGACATTTTTCTaGCATCTGTCTGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRLLTFF*HLSEAL
Trigger: CAGAGCCTCAGACAGATGGCAGAAAAATGTCAGCAG...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACTGCTGACATTTTTCTaGCATCTGTCTGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CREHWVGSSPLVKFDSPTLLTFF*HLSEAL
Trigger: CAGAGCCTCAGACAGATGGCAGAAAAATGTCAGCAG...TGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGGAATGGCTGGAATCTaGTCGGGAAGCTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAGMAGI*SGSCFQ
Trigger: CTGAAAACAGCTTCCCGAGCAGATTCCAGCCATTCC...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGAAAGGCCATAAGCAGTaGAATCAGCCGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWKGHKQ*NQPPLP
Trigger: GGGCAGAGGCGGCTGATTGCACTGCTTATGGCCTTT...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAAAAGGCCATAAGCAGTaGAATCAGCCGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLKGHKQ*NQPPLP
Trigger: GGGCAGAGGCGGCTGATTGCACTGCTTATGGCCTTT...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATATCCAGCTGCTGCCCTaGAGGGTGCTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYIQLLP*RVLVEE
Trigger: CTCCTCAACAAGCACCCTGCAGGGCAGCAGCTGGAT...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATAGAGCATGCATGCACTaGAGTGCGGCGATCCGGACA +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYRACMH*SAAIRT
Trigger: TGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCT...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGAGAGCATGCATGCACTaGAGTGCGGCGATCCGGACA +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVRACMH*SAAIRT
Trigger: TGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCT...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGCGAGTGAGAGCATaGATGCACTGCAGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLRRVRA*MHCSAA
Trigger: CGCCGCACTGCAGTGCATGCATGCTCTCACTCGCCT...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGCTCCACCCGCTCACTTaGCGTCTGGAACACCTCTCT +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVLHPLT*RLEHLS
Trigger: AGAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAG...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATCTCCACCCGCTCACTTaGCGTCTGGAACACCTCTCT +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYLHPLT*RLEHLS
Trigger: AGAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAG...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTGGCCGCCAGGCCCTCTaGCTCCACCCGCTCACTTGC +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSGRQAL*LHPLTC
Trigger: GCAAGTGAGCGGGTGGAGGCAGAGGGCCTGGCGGCC...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGCACCTGCAGCTGCCTaGAACAGCTTGGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLAPAAA*NSLALG
Trigger: GCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTGCACCTGCAGCTGCCTaGAACAGCTTGGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIAPAAA*NSLALG
Trigger: GCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGC...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGCACCTGCAGCTGCCTaGAACAGCTTGGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSAPAAA*NSLALG
Trigger: GCCTAGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGC...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGAGATGCACCTGCAGCTaGCTGCAACAGCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRRCTCS*LQQLGT
Trigger: AGTGCCAAGCTGTTGCAGGCAGCTGCAGGTGCATCT...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CACACACAGGCTAAGTGCCTTCAAACCCTGCAGGACAGATGGGATCACAAGATGTCCCCATCCATCACCTaGATGAAGCCAAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HTQAKCLQTLQDRWDHKMSPSIT*MKPKVK
Trigger: CTTCACCTTTGGCTTCATCCAGGTGATGGATGGGGA...CATCTTGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CCA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAAAACTCAGCAAATCGTaGTGTAGAAGCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: LYSSAGRQHLPALVLRATKLSKS*CRSQHS
Trigger: GCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTT...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAAAACTCAGCAAATCGTaGTGTAGAAGCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRKLSKS*CRSQHS
Trigger: GCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTT...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGCAGCTCCAAACTCAGCAAATCGTaGTGTAGAAGCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: HWVGSSPLVKFDSPTRSSKLSKS*CRSQHS
Trigger: GCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTT...GGAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAACCAGTGAGCACAGCTaGTCCTTGAAGCCATTCAGA +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKATSEHS*SLKPFR
Trigger: TCTGAATGGCTTCAAGGACCAGCTGTGCTCACTGGT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACCAGTGAGCACAGCTaGTCCTTGAAGCCATTCAGA +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRATSEHS*SLKPFR
Trigger: TCTGAATGGCTTCAAGGACCAGCTGTGCTCACTGGT...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTACCAGTGAGCACAGCTaGTCCTTGAAGCCATTCAGA +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLTSEHS*SLKPFR
Trigger: TCTGAATGGCTTCAAGGACCAGCTGTGCTCACTGGT...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAAGCTTGGGTACGAGGTaGCTGCTGAAGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSSLGTR*LLKATG
Trigger: CCCTGTGGCCTTCAGCAGCCACCTCGTACCCAAGCT...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAAGATGCCGGGAGCATTaGGTGGGCTCATCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLRCREH*VGSSPL
Trigger: TAACGGAGATGAGCCCACCCAATGCTCCCGGCATCT...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAACCATCCTGGAATGGCTaGAATCTGCTCGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWEPSWNG*NLLGKL
Trigger: CAGCTTCCCGAGCAGATTCCAGCCATTCCAGGATGG...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGCCATCCTGGAATGGCTaGAATCTGCTCGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRPSWNG*NLLGKL
Trigger: CAGCTTCCCGAGCAGATTCCAGCCATTCCAGGATGG...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGGAGCCATCCTGGAATaGCTGGAATCTGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWGAILE*LESARE
Trigger: TTCCCGAGCAGATTCCAGCCATTCCAGGATGGCTCC...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGGAGCCATCCTGGAATaGCTGGAATCTGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRGAILE*LESARE
Trigger: TTCCCGAGCAGATTCCAGCCATTCCAGGATGGCTCC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCCTGAGGAGCCATCCTaGAATGGCTGGAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWPEEPS*NGWNLL
Trigger: GAGCAGATTCCAGCCATTCCAGGATGGCTCCTCAGG...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCAGGAGCTGAGAGGATaGTATCTGAGCACTAGGGCC +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWQELRG*YLSTRA
Trigger: GGCCCTAGTGCTCAGATACCATCCTCTCAGCTCCTG...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGTCTTGGGGAGCAGCATaGAAGCCCTGGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWSWGAA*KPWTKA
Trigger: TGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGA...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAATCTTGGGGAGCAGCATaGAAGCCCTGGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWESWGAA*KPWTKA
Trigger: TGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGA...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGTTTGGCTTCACATCTTaGGGAGCAGCATGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERFGFTS*GAAWKP
Trigger: GGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAA...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCACCCTTCAAGTAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETTLQVV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGT...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGCAAGGAAAGAAGCGTaGGCAGCTCTGGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: TGCHFKQLLHKGSQAIVPARKEA*AALARV
Trigger: TACTCTTGCCAGAGCTGCCCACGCTTCTTTCCTTGC...AGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGTGTCATCCAGGGGTTTaGCTAAGGCCCGAATCACCT +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERCHPGV*LRPESP
Trigger: AGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACA...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAACCACTCCCCTCTaGCTGACACTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWETTPL*LTLLPC
Trigger: GCAAGGAAGCAGTGTCAGCCAGAGGGGAGTGGTTTC...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AATCAACAGGGGCAGCAGAAACTCAGCAAATCGTGGTGTAGAAGCCAGCACAGCGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: NQQGQQKLSKSWCRSQHSVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...GCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTTCTGCTGCCCCTGTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTACGCTCACTTGCCGTCTaGAACACCTCTCTGCGGATA +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLRSLAV*NTSLRI
Trigger: TATCCGCAGAGAGGTGTTCCAGACGGCAAGTGAGCG...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGATGGGATCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRDGITR*WSFSRF
Trigger: GAACCGGCTGAAGGACCATCATCTTGTGATCCCATC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTACGCGAAGACTCAGGATaGGGTCTTCTCTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLREDSG*GLLSGY
Trigger: GTATCCAGAGAGAAGACCTCATCCTGAGTCTTCGCG...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGCGCGAAGACTCAGGATaGGGTCTTCTCTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRREDSG*GLLSGY
Trigger: GTATCCAGAGAGAAGACCTCATCCTGAGTCTTCGCG...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAAGCACAGCTGGTCCTTaGAGCCATTCAGAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLSTAGP*SHSEAF
Trigger: AAAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCT...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTCTCAGTCTGTACAGGTaGCCCACTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLILSLYR*PTASSK
Trigger: CTTGGAGCTGGCAGTGGGTCACCTGTACAGACTGAG...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATGAGGCAGTGTCTCCTTaGCGATGCTGGGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYEAVSP*RCWDVL
Trigger: CAACACATCCCAGCATCGTCAAGGAGACACTGCCTC...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAATCTGTCTGAGGCTCTaGCAGACAGCAATAACGTCA +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAICLRL*QTAITS
Trigger: TGACGTTATTGCTGTCTGTCAGAGCCTCAGACAGAT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGTTTCTGCCATCTGTCTaGGGCTCTGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERFLPSV*GSDRQQ
Trigger: TTGCTGTCTGTCAGAGCCTCAGACAGATGGCAGAAA...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCTCTCAGGGTCCTGCTaGCATTTTTCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERLSGSC*HFSAIC
Trigger: ACAGATGGCAGAAAAATGTCAGCAGGACCCTGAGAG...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAGCCGGTTCTCATAGAACAGTATCAGGTGTACCACTTCCTTCTCCAGGAGCAACTCTCAGGGTCCTGCTaGCATTTTTCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: QPVLIEQYQVYHFLLQEQLSGSC*HFSAIC
Trigger: ACAGATGGCAGAAAAATGTCAGCAGGACCCTGAGAG...TTGCTCCTGGAGAAGGAAGTGGTACACCTGATACTGTTCTATGAGAACCGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCATACTTTTCTCAGAACTaGGGGCTCCTTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAYFSQN*GLLLWH
Trigger: ATGCCAGAGAAGGAGCCCTCAGTTCTGAGAAAAGTA...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAATGAGTTGGTTCAGCTaGGGGATTTCCACATTTCGA +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRMSWFS*GISTFR
Trigger: TCGAAATGTGGAAATCCCTCAGCTGAACCAACTCAT...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAGGTTCAGAAACTTGGTaGCGAGGGTGTCCACGTGAA +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLGSETW*RGCPRE
Trigger: TTCACGTGGACACCCTCGTCACCAAGTTTCTGAACC...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTAAGCTGGATTGCTCGTaGCCGAGTTCGGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIKLDCS*PSSGFW
Trigger: CCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTT...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ATTGGTGATGATATTGTAGACTGTGTGTCGGTCCACCTGTGGCAGGGACTGTACAGTGCCTTCAAACCCTaGAGGACAGATGGGATCACA +
Preference number: 4 (lower is better)
Translates to: IGDDIVDCVSVHLWQGLYSAFKP*RTDGIT
Trigger: TGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACT...GTACAGTCCCTGCCACAGGTGGACCGACACACAGTCTACAATATCATCACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
CDS-3UTR GCA 90 bp AGGGAAATAACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTCACACACAGGCTAAGTaGCTTCAAACCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: REITGCHFKQLLHKGSQAHTQAK*LQTLQD
Trigger: GTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG...AGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGTTATTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR GCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAAACGTCACTGGATTGTaGAACCATATTCCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSNVTGL*NHIPSV
Trigger: AACAGAGGGAATATGGTTGCACAATCCAGTGACGTT...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCACTGCTGACATTTTTCTaGCATCTGTCTGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKALLTFF*HLSEAL
Trigger: CAGAGCCTCAGACAGATGGCAGAAAAATGTCAGCAG...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTCTGCTGACATTTTTCTaGCATCTGTCTGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLLLTFF*HLSEAL
Trigger: CAGAGCCTCAGACAGATGGCAGAAAAATGTCAGCAG...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCTTGTTGAGGAGTCCTaGAAAGCACTTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWLVEES*KALGSS
Trigger: GCTGCTGCCAAGTGCTTTGCAGGACTCCTCAACAAG...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTATCCAGCTGCTGCCCTaGAGGGTGCTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIIQLLP*RVLVEE
Trigger: CTCCTCAACAAGCACCCTGCAGGGCAGCAGCTGGAT...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATAGGAATTCATCCAGCTaGTGCCCTGCAGGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYRNSSS*CPAGCL
Trigger: CAAGCACCCTGCAGGGCAGCAGCTGGATGAATTCCT...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAATGCATGCACTGCAGTaGGGCGATCCGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSMHALQ*GDPDSH
Trigger: ATGGCTGTCCGGATCGCCGCACTGCAGTGCATGCAT...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCATTCTTTGTACAGCCATaGAACAGAGGCCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSFFVQP*NRGLAF
Trigger: AAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTCAGGTAGACAACATCTaGCAGCCCTGGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIQVDNI*QPWSSG
Trigger: CCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTG...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGAGAGGGAAGGCGGCTaGTGGGCACGCAGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMEREGG*WARSRR
Trigger: CCTCCGGCTGCGTGCCCAGCAGCCGCCTTCCCTCTC...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS-3UTR GCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCCTCCACCCGCTCACTTaGCGTCTGGAACACCTCTCT +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLLHPLT*RLEHLS
Trigger: AGAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAG...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAGGTTCACACAGGTGGTaGCTGCAGTCCTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWEGSHRW*LQSCRM
Trigger: CATTCTACAGGACTGCAGGCACCACCTGTGTGAACC...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CAGCCGGTTCTCATAGAACAGTATCAGGTGTACCACTTCCTTCTCCAGGAGCAAACCCTGCAGGACAGATaGGATCACAAGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: QPVLIEQYQVYHFLLQEQTLQDR*DHKMMV
Trigger: GACCATCATCTTGTGATCCCATCTGTCCTGCAGGGT...TTGCTCCTGGAGAAGGAAGTGGTACACCTGATACTGTTCTATGAGAACCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
CDS-3UTR CCA 90 bp ATTGGTGATGATATTGTAGACTGTGTGTCGGTCCACCTGTGGCAGGGACTGTACACCCTGCAGGACAGATaGGATCACAAGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: IGDDIVDCVSVHLWQGLYTLQDR*DHKMMV
Trigger: GACCATCATCTTGTGATCCCATCTGTCCTGCAGGGT...GTACAGTCCCTGCCACAGGTGGACCGACACACAGTCTACAATATCATCACCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CCA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCATGTACATGCACTTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACA...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTTCCCCATCCATCACCTaGATGAAGCCAAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: TGCHFKQLLHKGSQAIVPSPSIT*MKPKVK
Trigger: CTTCACCTTTGGCTTCATCCAGGTGATGGATGGGGA...AGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCCTGGAGATGAGGTCATaGACGATGCGGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLLEMRS*TMRKAT
Trigger: GGTGGCCTTCCGCATCGTCCATGACCTCATCTCCAG...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACAAACTCAGCAAATCGTaGTGTAGAAGCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDKLSKS*CRSQHS
Trigger: GCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTT...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGCACCTGTGACAAAAGCTGGATTGCTCGTGCCCGAGTTCGGGGTTCTGGATTCGTAGAGAATCCAACTTaGCACTCAGAACCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: STCDKSWIARARVRGSGFVENPT*HSEPQN
Trigger: ATTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTAC...GAATCCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCACAGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
CDS-3UTR CCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGATAGGAGATCTGGCTaGGCACCCAAGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRDRRSG*APKTVS
Trigger: ACTGACAGTCTTGGGTGCCCAGCCAGATCTCCTATC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GATGAGGTCATGGACGATGCGGAAGGCCACCAGAAGATTACGGGGATCCTTTTCCAAGGTATAGCTGTCTaGTGGAAATACCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: DEVMDDAEGHQKITGILFQGIAV*WKYQQL
Trigger: GAGTTGCTGGTATTTCCACCAGACAGCTATACCTTG...GAAAAGGATCCCCGTAATCTTCTGGTGGCCTTCCGCATCGTCCATGACCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCCAAGGTATAGCTGTCTaGTGGAAATACCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: CNRGLAFVLCLWERQSETQGIAV*WKYQQL
Trigger: GAGTTGCTGGTATTTCCACCAGACAGCTATACCTTG...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAACTCAGGGCTCAGGTaGGTTGTAGCAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWENSGLR*VVAVPM
Trigger: CATTGGCACTGCTACAACCCACCTGAGCCCTGAGTT...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGATGTGTGTCACACTCTaGGCAGCTAACTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRMCVTL*AANSGL
Trigger: GAGCCCTGAGTTAGCTGCCCAGAGTGTGACACACAT...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATCCATCCTGGAATGGCTaGAATCTGCTCGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYPSWNG*NLLGKL
Trigger: CAGCTTCCCGAGCAGATTCCAGCCATTCCAGGATGG...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAGTCCTGCAAAGCACTTaGCAGCAGCGGTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLVLQST*QQRWKK
Trigger: TTTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGAC...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGCAGGAGCTGAGAGGATaGTATCTGAGCACTAGGGCC +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVQELRG*YLSTRA
Trigger: GGCCCTAGTGCTCAGATACCATCCTCTCAGCTCCTG...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTATCCGCACTTCGGCATaGCCAGCACGAGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIIRTSA*PARVST
Trigger: TGTGCTGACTCGTGCTGGCCATGCCGAAGTGCGGAT...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGTCTTGGGGAGCAGCATaGAAGCCCTGGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVSWGAA*KPWTKA
Trigger: TGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGA...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTACCCTTCAAGTAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLTLQVV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGT...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAAACATCTGCCAGCCCTaGTCCTCAGGGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSNICQP*SSGPHS
Trigger: TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTT...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTAACATCTGCCAGCCCTaGTCCTCAGGGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLINICQP*SSGPHS
Trigger: TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTT...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp CAAGATGATGGTCCTTCAGCCGGTTCTCATAGAACAGTATCAGGTGTACCACTTCGCGAAGACTCAGGATaGGGTCTTCTCTCTGGATAC +
Preference number: 4 (lower is better)
Translates to: QDDGPSAGSHRTVSGVPLREDSG*GLLSGY
Trigger: GTATCCAGAGAGAAGACCTCATCCTGAGTCTTCGCG...AAGTGGTACACCTGATACTGTTCTATGAGAACCGGCTGAAGGACCATCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
CDS-3UTR TCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGGTCTGTTAGAGCCATaGATACCAGTGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRGLLEP*IPVSTA
Trigger: AGCTGTGCTCACTGGTATTCATGGCTCTAACAGACC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGGTCTGTTAGAGCCATaGATACCAGTGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWGLLEP*IPVSTA
Trigger: AGCTGTGCTCACTGGTATTCATGGCTCTAACAGACC...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTCTCAGTCTGTACAGGTaGCCCACTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFLSLYR*PTASSK
Trigger: CTTGGAGCTGGCAGTGGGTCACCTGTACAGACTGAG...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGGGATTTCCACATTTCGAGGCAGGGAGCAGACAAAGGCCATAAGCAGTGCAATATCTGTCTGAGGCTCTaGCAGACAGCAATAACGTCA +
Preference number: 4 (lower is better)
Translates to: RDFHISRQGADKGHKQCNICLRL*QTAITS
Trigger: TGACGTTATTGCTGTCTGTCAGAGCCTCAGACAGAT...ATTGCACTGCTTATGGCCTTTGTCTGCTCCCTGCCTCGAAATGTGGAAATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAACTCTCAGGGTCCTGCTaGCATTTTTCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWELSGSC*HFSAIC
Trigger: ACAGATGGCAGAAAAATGTCAGCAGGACCCTGAGAG...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGAGATACTTTTCTCAGAACTaGGGGCTCCTTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: MSLQTTPPQRVPGYSPWRYFSQN*GLLLWH
Trigger: ATGCCAGAGAAGGAGCCCTCAGTTCTGAGAAAAGTA...TCTCCAGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAATGAGTTGGTTCAGCTaGGGGATTTCCACATTTCGA +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAMSWFS*GISTFR
Trigger: TCGAAATGTGGAAATCCCTCAGCTGAACCAACTCAT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGCAGTAAAGGCAGTACATTGCTGGTGACAGAGTCACAGGCCCGGGCAGATGCAATATCGCCCCTTTTCTaGCATATAAATGCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSKGSTLLVTESQARADAISPLF*HINARD
Trigger: GTCTCTTGCATTTATATGTCAGAAAAGGGGCGATAT...TGCATCTGCCCGGGCCTGTGACTCTGTCACCAGCAATGTACTGCCTTTACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAAGTGCCTTCAAACCCTaGAGGACAGATGGGATCACA +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLSAFKP*RTDGIT
Trigger: TGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACT...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAGATGGGATCACAAGATGATGGTCCTTCAGCCGGTTCTCATAGAACAGTATCAGGCAGGGACTGTACATaGACTTCCTGGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: QMGSQDDGPSAGSHRTVSGRDCT*TSWKMA
Trigger: AGCCATCTTCCAGGAAGTGCATGTACAGTCCCTGCC...TGATACTGTTCTATGAGAACCGGCTGAAGGACCATCATCTTGTGATCCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
CDS-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCACAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGCAGACAGCACAGATaGCGGGAGCATTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSICRQHR*REHWVG
Trigger: GCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCA...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAACAGCTGACAAGGCTTaGAGACAGCACAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSTADKA*RQHRCR
Trigger: CCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGT...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAAACGTCACTGGATTGTaGAACCATATTCCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRNVTGL*NHIPSV
Trigger: AACAGAGGGAATATGGTTGCACAATCCAGTGACGTT...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CAAGTAGTTTGGCTTCACATCTTGGGGAGCAGCATGGAAGCCCTGGACCAAAGCAACGTCACTGGATTGTaGAACCATATTCCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QVVWLHILGSSMEALDQSNVTGL*NHIPSV
Trigger: AACAGAGGGAATATGGTTGCACAATCCAGTGACGTT...GCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAACTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp AAGGTGAAGTCAGCTCCTAGGCTCTTTAGCTCTTCTTCCCGGGTTCGCATAAAAGGAATGGCTGGAATCTaGTCGGGAAGCTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: KVKSAPRLFSSSSRVRIKGMAGI*SGSCFQ
Trigger: CTGAAAACAGCTTCCCGAGCAGATTCCAGCCATTCC...TTTTATGCGAACCCGGGAAGAAGAGCTAAAGAGCCTAGGAGCTGACTTCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGGCAATCAGCCGCCTCTaGCCTGAGGAGCCATCCTGG +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRAISRL*PEEPSW
Trigger: CCAGGATGGCTCCTCAGGGCAGAGGCGGCTGATTGC...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCTGACACTGCTTCCTTaGGCACCAGTCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWLTLLP*APVSSC
Trigger: ACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAG...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCATATaGACTCACCCCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLRATLI*THPSAA
Trigger: TGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCT...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAAGGGCCACACTCATATaGACTCACCCCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSRATLI*THPSAA
Trigger: TGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCT...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATGGTTCACACAGGTGGTaGCTGCAGTCCTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYGSHRW*LQSCRM
Trigger: CATTCTACAGGACTGCAGGCACCACCTGTGTGAACC...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGACCTGTGACAAAAGCTaGATTGCTCGTGCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWTCDKS*IARARV
Trigger: AACTCGGGCACGAGCAATCCAGCTTTTGTCACAGGT...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGGGAAATAACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTACCTGTGACAAAAGCTaGATTGCTCGTGCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: REITGCHFKQLLHKGSQATCDKS*IARARV
Trigger: AACTCGGGCACGAGCAATCCAGCTTTTGTCACAGGT...AGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGTTATTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAACCCTGCAGGACAGATaGGATCACAAGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLTLQDR*DHKMMV
Trigger: GACCATCATCTTGTGATCCCATCTGTCCTGCAGGGT...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGATGTACATGCACTTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACA...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CACAGATGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTTGACTCCTGTACATGCACTTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: HRCREHWVGSSPLVKFDSCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACA...GGAGTCAAATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CCA 90 bp AGGGGTAAAATCGATAGGGAAATAACAGGATGTCACTTCAAACAACTCCTCCACGTGTCGGTCCACCTGTaGCAGGGACTGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: RGKIDREITGCHFKQLLHVSVHL*QGLYMH
Trigger: GTGCATGTACAGTCCCTGCCACAGGTGGACCGACAC...GTGGAGGAGTTGTTTGAAGTGACATCCTGTTATTTCCCTATCGATTTTACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAATCCCCATCCATCACCTaGATGAAGCCAAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWESPSIT*MKPKVK
Trigger: CTTCACCTTTGGCTTCATCCAGGTGATGGATGGGGA...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GCAGGACAGATGGGATCACAAGATGATGGTCCTTCAGCCGGTTCTCATAGAACAAAACTCAGCAAATCGTaGTGTAGAAGCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: AGQMGSQDDGPSAGSHRTKLSKS*CRSQHS
Trigger: GCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTT...TGTTCTATGAGAACCGGCTGAAGGACCATCATCTTGTGATCCCATCTGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
CDS-3UTR CCA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGTAGAGAATCCAACTTaGCACTCAGAACCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRVENPT*HSEPQN
Trigger: ATTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTAC...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATTGTAGACTGTGTGTCGGTCCACCTGTGGCAGGGACTGTACATGCACTTCCTGGTAGAGAATCCAACTTaGCACTCAGAACCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: IVDCVSVHLWQGLYMHFLVENPT*HSEPQN
Trigger: ATTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTAC...CAGGAAGTGCATGTACAGTCCCTGCCACAGGTGGACCGACACACAGTCTACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441194.5
CDS-3UTR CCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGACCAGTGAGCACAGCTaGTCCTTGAAGCCATTCAGA +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRTSEHS*SLKPFR
Trigger: TCTGAATGGCTTCAAGGACCAGCTGTGCTCACTGGT...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGATAGGAGATCTGGCTaGGCACCCAAGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVDRRSG*APKTVS
Trigger: ACTGACAGTCTTGGGTGCCCAGCCAGATCTCCTATC...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAAGATGCCGGGAGCATTaGGTGGGCTCATCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSRCREH*VGSSPL
Trigger: TAACGGAGATGAGCCCACCCAATGCTCCCGGCATCT...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAAGGTATAGCTGTCTaGTGGAAATACCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDQGIAV*WKYQQL
Trigger: GAGTTGCTGGTATTTCCACCAGACAGCTATACCTTG...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGAACTCAGGGCTCAGGTaGGTTGTAGCAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVNSGLR*VVAVPM
Trigger: CATTGGCACTGCTACAACCCACCTGAGCCCTGAGTT...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGAGCCATCCTGGAATaGCTGGAATCTGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSGAILE*LESARE
Trigger: TTCCCGAGCAGATTCCAGCCATTCCAGGATGGCTCC...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGGAGCCATCCTGGAATaGCTGGAATCTGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLGAILE*LESARE
Trigger: TTCCCGAGCAGATTCCAGCCATTCCAGGATGGCTCC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTACTTGGCAGCAGCGGTaGAAGAAAAGGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLITWQQR*KKRGSC
Trigger: ACAGCTGCCCCTTTTCTTCCACCGCTGCTGCCAAGT...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCACTTGGCAGCAGCGGTaGAAGAAAAGGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLTWQQR*KKRGSC
Trigger: ACAGCTGCCCCTTTTCTTCCACCGCTGCTGCCAAGT...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTCTGTGAAGAACCGCTaGCGGAACATGATCCGCACT +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYSVKNR*RNMIRT
Trigger: AGTGCGGATCATGTTCCGCCAGCGGTTCTTCACAGA...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTCTTGGGGAGCAGCATaGAAGCCCTGGACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLISWGAA*KPWTKA
Trigger: TGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGA...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTGGCCCGAATCACCTGTaGTTTGTACGGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFGPNHL*FVRQQH
Trigger: GTGCTGCTGCCGTACAAACCACAGGTGATTCGGGCC...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGTGTCATCCAGGGGTTTaGCTAAGGCCCGAATCACCT +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVCHPGV*LRPESP
Trigger: AGGTGATTCGGGCCTTAGCCAAACCCCTGGATGACA...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTGAAACCACTCCCCTCTaGCTGACACTGCTTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIETTPL*LTLLPC
Trigger: GCAAGGAAGCAGTGTCAGCCAGAGGGGAGTGGTTTC...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGCTGCCACCCAACTCTaGGAATCCTCCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLAATQL*ESSFRK
Trigger: CTTCCTGAAGGAGGATTCCCAGAGTTGGGTGGCAGC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
3UTR CAA 72 bp TCTGAGGCTCTGACAGACAGCAATAACGTCACTGGATaGTGCAACCATATTCCCTCTGTTCACTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SEALTDSNNVTG*CNHIPSVHLPE
Trigger: CTCTGGCAAGTGAACAGAGGGAATATGGTTGCACAATCCAGTGACGTTATTGCTGTCTGTCAGAGCCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGTCCGTTAGTCAAATTTaGCTCCCCTACACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVSVSQI*LPYTQL
Trigger: GAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGA...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTGAGGCAGTGTCTCCTTaGCGATGCTGGGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFEAVSP*RCWDVL
Trigger: CAACACATCCCAGCATCGTCAAGGAGACACTGCCTC...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGTTTCTGCCATCTGTCTaGGGCTCTGACAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVFLPSV*GSDRQQ
Trigger: TTGCTGTCTGTCAGAGCCTCAGACAGATGGCAGAAA...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp GCAGGACAGATGGGATCACAAGATGATGGTCCTTCAGCCGGTTCTCATAGAACAATGAGTTGGTTCAGCTaGGGGATTTCCACATTTCGA +
Preference number: 4 (lower is better)
Translates to: AGQMGSQDDGPSAGSHRTMSWFS*GISTFR
Trigger: TCGAAATGTGGAAATCCCTCAGCTGAACCAACTCAT...TGTTCTATGAGAACCGGCTGAAGGACCATCATCTTGTGATCCCATCTGTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR TCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCCAGGCACATTATCTGTaGAGAACCGCTGGCGGAACA +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLQAHYL*RTAGGT
Trigger: TGTTCCGCCAGCGGTTCTTCACAGATAATGTGCCTG...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAAGTCTAGGCCAGGACTaGGGGCTCAGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLSLGQD*GLSCQG
Trigger: GCCCTGGCAGCTGAGCCCTCAGTCCTGGCCTAGACT...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGAGTCTAGGCCAGGACTaGGGGCTCAGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMSLGQD*GLSCQG
Trigger: GCCCTGGCAGCTGAGCCCTCAGTCCTGGCCTAGACT...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTGCCAGATTTCACATCTaGAGCCACCTGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIARFHI*SHLVSG
Trigger: CCCGCTGACCAGGTGGCTGCAGATGTGAAATCTGGC...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR GCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTCACACACAGGCTAAGTaGCTTCAAACCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIHTQAK*LQTLQD
Trigger: GTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCCTGTCAGTGTACGGATaGCAACAAGCTGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLLSVYG*QQAEAG
Trigger: CCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAG...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTAAAGGCCATAAGCAGTaGAATCAGCCGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFKGHKQ*NQPPLP
Trigger: GGGCAGAGGCGGCTGATTGCACTGCTTATGGCCTTT...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTATCCAGCTGCTGCCCTaGAGGGTGCTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIIQLLP*RVLVEE
Trigger: CTCCTCAACAAGCACCCTGCAGGGCAGCAGCTGGAT...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTAGAGCATGCATGCACTaGAGTGCGGCGATCCGGACA +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIRACMH*SAAIRT
Trigger: TGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCT...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSDQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLDQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCTTCTTTGTACAGCCATaGAACAGAGGCCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAFFVQP*NRGLAF
Trigger: AAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCATTCTTTGTACAGCCATaGAACAGAGGCCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAFFVQP*NRGLAF
Trigger: AAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTAGGGCCACACTCATATaGACTCACCCCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFRATLI*THPSAA
Trigger: TGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCT...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGGTTCACACAGGTGGTaGCTGCAGTCCTGTAGAATG +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLGSHRW*LQSCRM
Trigger: CATTCTACAGGACTGCAGGCACCACCTGTGTGAACC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATACCTGTGACAAAAGCTaGATTGCTCGTGCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYTCDKS*IARARV
Trigger: AACTCGGGCACGAGCAATCCAGCTTTTGTCACAGGT...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGTGTACATGCACTTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: RMSLQTTPPQRVPGYSPWCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACA...CCAGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CCA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCATGAGGTCTTCTCTCTaGATACCATGGGGATCATTA +
Preference number: 4 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAMRSSL*IPWGSL
Trigger: TAATGATCCCCATGGTATCCAGAGAGAAGACCTCAT...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGACCAGTGAGCACAGCTaGTCCTTGAAGCCATTCAGA +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVTSEHS*SLKPFR
Trigger: TCTGAATGGCTTCAAGGACCAGCTGTGCTCACTGGT...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTAGATGCCGGGAGCATTaGGTGGGCTCATCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFRCREH*VGSSPL
Trigger: TAACGGAGATGAGCCCACCCAATGCTCCCGGCATCT...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTAACTCAGGGCTCAGGTaGGTTGTAGCAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLINSGLR*VVAVPM
Trigger: CATTGGCACTGCTACAACCCACCTGAGCCCTGAGTT...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTATGTGTGTCACACTCTaGGCAGCTAACTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIMCVTL*AANSGL
Trigger: GAGCCCTGAGTTAGCTGCCCAGAGTGTGACACACAT...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACTTGGCAGCAGCGGTaGAAGAAAAGGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFTWQQR*KKRGSC
Trigger: ACAGCTGCCCCTTTTCTTCCACCGCTGCTGCCAAGT...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTCAGGAGCTGAGAGGATaGTATCTGAGCACTAGGGCC +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFQELRG*YLSTRA
Trigger: GGCCCTAGTGCTCAGATACCATCCTCTCAGCTCCTG...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCATTTGGCTTCACATCTTaGGGAGCAGCATGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSFGFTS*GAAWKP
Trigger: GGGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAA...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAACCCTTCAAGTAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLTLQVV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGT...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGCAAGGAAAGAAGCGTaGGCAGCTCTGGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSARKEA*AALARV
Trigger: TACTCTTGCCAGAGCTGCCCACGCTTCTTTCCTTGC...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTTATAGTCCCTGGAGATaGGGTCATGGACGATGCGGA +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFYSPWR*GHGRCG
Trigger: TCCGCATCGTCCATGACCTCATCTCCAGGGACTATA...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGGTCTGTTAGAGCCATaGATACCAGTGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLGLLEP*IPVSTA
Trigger: AGCTGTGCTCACTGGTATTCATGGCTCTAACAGACC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTAGCAGCCAGGGTTCCTaGTGCTTCCAGTGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSSSQGS*CFQCCH
Trigger: GTGGCAGCACTGGAAGCATCAGGAACCCTGGCTGCT...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTCCGTTAGTCAAATTTaGCTCCCCTACACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLISVSQI*LPYTQL
Trigger: GAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGA...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGTACTTTTCTCAGAACTaGGGGCTCCTTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVYFSQN*GLLLWH
Trigger: ATGCCAGAGAAGGAGCCCTCAGTTCTGAGAAAAGTA...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAATGAGTTGGTTCAGCTaGGGGATTTCCACATTTCGA +
Preference number: 4 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWEMSWFS*GISTFR
Trigger: TCGAAATGTGGAAATCCCTCAGCTGAACCAACTCAT...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTCAGTGCAGTCAGACATaGGCAGAGAGAAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFQCSQT*AERSHQ
Trigger: CTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTG...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTCCACGTGAAGACTCATaGCTTGGGGTGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFPREDS*LGVLPV
Trigger: TACTGGAAGCACCCCAAGTCATGAGTCTTCACGTGG...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTACGAGGGTGTCCACGTaGAGACTCATGACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSITRVST*RLMTWG
Trigger: ACCCCAAGTCATGAGTCTTCACGTGGACACCCTCGT...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGTGCCTTCAAACCCTaGAGGACAGATGGGATCACA +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLSAFKP*RTDGIT
Trigger: TGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACT...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTCAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTACAGCTGACAAGGCTTaGAGACAGCACAGATGCCGG +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSITADKA*RQHRCR
Trigger: CCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGT...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGAATGGCTGGAATCTaGTCGGGAAGCTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSGMAGI*SGSCFQ
Trigger: CTGAAAACAGCTTCCCGAGCAGATTCCAGCCATTCC...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGATGCATGCACTGCAGTaGGGCGATCCGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRMHALQ*GDPDSH
Trigger: ATGGCTGTCCGGATCGCCGCACTGCAGTGCATGCAT...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCACTGACACTGCTTCCTTaGGCACCAGTCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSLTLLP*APVSSC
Trigger: ACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAG...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFDQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp TGGAGGGGTAAAATCGATAGGGAAATAACAGGATGTCACTTCAAACAACTCCTCGACCAGTGGTTTCCCTaGTTTGGGGAAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: WRGKIDREITGCHFKQLLDQWFP*FGEDGS
Trigger: TGAGCCATCTTCCCCAAAGCAGGGAAACCACTGGTC...GAGGAGTTGTTTGAAGTGACATCCTGTTATTTCCCTATCGATTTTACCCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp TCCATCACCTGGATGAAGCCAAAGGTGAAGTCAGCTCCTAGGCTCTTTAGCTCTTTCTTTGTACAGCCATaGAACAGAGGCCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: SITWMKPKVKSAPRLFSSFFVQP*NRGLAF
Trigger: AAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA...AGAGCTAAAGAGCCTAGGAGCTGACTTCACCTTTGGCTTCATCCAGGTGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR GCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCAGGTAGACAACATCTaGCAGCCCTGGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRQVDNI*QPWSSG
Trigger: CCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTG...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCTCTCTCTGGATACCATaGGGATCATTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLSLWIP*GSLGGG
Trigger: CCCTCCACCTAATGATCCCCATGGTATCCAGAGAGA...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTCTCTCTGGATACCATaGGGATCATTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLISLWIP*GSLGGG
Trigger: CCCTCCACCTAATGATCCCCATGGTATCCAGAGAGA...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAGGTATAGCTGTCTGGTaGAAATACCAGCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLGIAVW*KYQQLS
Trigger: TGAGAGTTGCTGGTATTTCCACCAGACAGCTATACC...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTACAAGGTATAGCTGTCTaGTGGAAATACCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLQGIAV*WKYQQL
Trigger: GAGTTGCTGGTATTTCCACCAGACAGCTATACCTTG...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTATGTGTGTCACACTCTaGGCAGCTAACTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFMCVTL*AANSGL
Trigger: GAGCCCTGAGTTAGCTGCCCAGAGTGTGACACACAT...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTTCTGTGAAGAACCGCTaGCGGAACATGATCCGCACT +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFSVKNR*RNMIRT
Trigger: AGTGCGGATCATGTTCCGCCAGCGGTTCTTCACAGA...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGGGCCCGAATCACCTGTaGTTTGTACGGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRGPNHL*FVRQQH
Trigger: GTGCTGCTGCCGTACAAACCACAGGTGATTCGGGCC...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTGTGGTTTCCCTGCTTTaGGGAAGATGGCTCAACAGT +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIVVSLL*GRWLNS
Trigger: ACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCAC...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTAGAAGAGTGAAGGCCTaGCTACGACAGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSRRVKA*LRQGPE
Trigger: CTCTGGGCCCTGTCGTAGTCAGGCCTTCACTCTTCT...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTGGTTCAGAAACTTGGTaGCGAGGGTGTCCACGTGAA +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIGSETW*RGCPRE
Trigger: TTCACGTGGACACCCTCGTCACCAAGTTTCTGAACC...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGATATCGCCCCTTTTCTaGCATATAAATGCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERISPLF*HINARD
Trigger: GTCTCTTGCATTTATATGTCAGAAAAGGGGCGATAT...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTTCACTTGCCAGAGATaGTGCAGCAGCAGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIFTCQR*CSSRGS
Trigger: ACTGCCTCTGCTGCTGCAGCATCTCTGGCAAGTGAA...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTCTGCTGACATTTTTCTaGCATCTGTCTGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLILLTFF*HLSEAL
Trigger: CAGAGCCTCAGACAGATGGCAGAAAAATGTCAGCAG...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGAAAGGCCATAAGCAGTaGAATCAGCCGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRKGHKQ*NQPPLP
Trigger: GGGCAGAGGCGGCTGATTGCACTGCTTATGGCCTTT...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTACTGAGGGTGGAGAGCTaGACCACACAGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLLRVES*TTQSGQ
Trigger: CTGCCCTGACTGTGTGGTGCAGCTCTCCACCCTCAG...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTATGCATGCACTGCAGTaGGGCGATCCGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSMHALQ*GDPDSH
Trigger: ATGGCTGTCCGGATCGCCGCACTGCAGTGCATGCAT...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTAGAGCATGCATGCACTaGAGTGCGGCGATCCGGACA +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSRACMH*SAAIRT
Trigger: TGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCT...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGAGGCGAGTGAGAGCATaGATGCACTGCAGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMRRVRA*MHCSAA
Trigger: CGCCGCACTGCAGTGCATGCATGCTCTCACTCGCCT...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTCTGACACTGCTTCCTTaGGCACCAGTCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFLTLLP*APVSSC
Trigger: ACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAG...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTCAGGTAGACAACATCTaGCAGCCCTGGTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSQVDNI*QPWSSG
Trigger: CCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTG...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACCCTGCAGGACAGATaGGATCACAAGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFTLQDR*DHKMMV
Trigger: GACCATCATCTTGTGATCCCATCTGTCCTGCAGGGT...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGTAGAGAATCCAACTTaGCACTCAGAACCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWVENPT*HSEPQN
Trigger: ATTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTAC...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATGGTATAGCTGTCTGGTaGAAATACCAGCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYGIAVW*KYQQLS
Trigger: TGAGAGTTGCTGGTATTTCCACCAGACAGCTATACC...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCATCCTGGAATGGCTaGAATCTGCTCGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRPSWNG*NLLGKL
Trigger: CAGCTTCCCGAGCAGATTCCAGCCATTCCAGGATGG...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
3UTR CAA 72 bp GCACAGCAAGCATTCAGAGTCTGTAGAGAATCCAACTaGGCACTCAGAACCTCAGAATCCACTTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: AQQAFRVCRESN*ALRTSESTFSI
Trigger: GATTGAGAAAGTGGATTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTACAGACTCTGAATGCTTGCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
CDS-3UTR TCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGGATGGGATCACAAGATaGTGGTCCTTCAGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRDGITR*WSFSRF
Trigger: GAACCGGCTGAAGGACCATCATCTTGTGATCCCATC...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTCCGTTAGTCAAATTTaGCTCCCCTACACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSISVSQI*LPYTQL
Trigger: GAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGA...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTGAGGCAGTGTCTCCTTaGCGATGCTGGGATGTGTTG +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSEAVSP*RCWDVL
Trigger: CAACACATCCCAGCATCGTCAAGGAGACACTGCCTC...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTATCTGTCTGAGGCTCTaGCAGACAGCAATAACGTCA +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFICLRL*QTAITS
Trigger: TGACGTTATTGCTGTCTGTCAGAGCCTCAGACAGAT...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGAGAAGAGTGAAGGCCTaGCTACGACAGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMRRVKA*LRQGPE
Trigger: CTCTGGGCCCTGTCGTAGTCAGGCCTTCACTCTTCT...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGTCCAGTAGAAGAGGCTaGAGGCAGCTGAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMSSRRG*RQLRVE
Trigger: CTCCACCCTCAGCTGCCTTCAGCCTCTTCTACTGGA...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGGGTTCAGAAACTTGGTaGCGAGGGTGTCCACGTGAA +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRGSETW*RGCPRE
Trigger: TTCACGTGGACACCCTCGTCACCAAGTTTCTGAACC...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGATATCGCCCCTTTTCTaGCATATAAATGCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWISPLF*HINARD
Trigger: GTCTCTTGCATTTATATGTCAGAAAAGGGGCGATAT...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTCAAGCTGAAGCTGGGTaGTGGGGTCTGTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSQAEAG*WGLLEP
Trigger: TGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTG...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCTTGTTGAGGAGTCCTaGAAAGCACTTGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRLVEES*KALGSS
Trigger: GCTGCTGCCAAGTGCTTTGCAGGACTCCTCAACAAG...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGATGCATGCACTGCAGTaGGGCGATCCGGACAGCCAT +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMMHALQ*GDPDSH
Trigger: ATGGCTGTCCGGATCGCCGCACTGCAGTGCATGCAT...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGTTCTTTGTACAGCCATaGAACAGAGGCCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVFFVQP*NRGLAF
Trigger: AAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGTGTCGGTCCACCTGTaGCAGGGACTGTACATGCAC +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMVSVHL*QGLYMH
Trigger: GTGCATGTACAGTCCCTGCCACAGGTGGACCGACAC...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR CCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATATGAGGTCTTCTCTCTaGATACCATGGGGATCATTA +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYMRSSL*IPWGSL
Trigger: TAATGATCCCCATGGTATCCAGAGAGAAGACCTCAT...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CATAAAATTGGTGATGATATTGTAGACTGTGTGTCGGTCCACCTGTGGCAGGGAATGAGGTCTTCTCTCTaGATACCATGGGGATCATTA +
Preference number: 4 (lower is better)
Translates to: HKIGDDIVDCVSVHLWQGMRSSL*IPWGSL
Trigger: TAATGATCCCCATGGTATCCAGAGAGAAGACCTCAT...TCCCTGCCACAGGTGGACCGACACACAGTCTACAATATCATCACCAATTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441194.5
CDS-3UTR CCA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATGTAGAGAATCCAACTTaGCACTCAGAACCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYVENPT*HSEPQN
Trigger: ATTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTAC...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTAGATGCCGGGAGCATTaGGTGGGCTCATCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSRCREH*VGSSPL
Trigger: TAACGGAGATGAGCCCACCCAATGCTCCCGGCATCT...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGTATAGCTGTCTGGTaGAAATACCAGCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: KEIFILQQVDNICQPWSSGIAVW*KYQQLS
Trigger: TGAGAGTTGCTGGTATTTCCACCAGACAGCTATACC...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGAACATCTGCCAGCCCTaGTCCTCAGGGCCACACTCA +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMNICQP*SSGPHS
Trigger: TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTT...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR TCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGGGTCTGTTAGAGCCATaGATACCAGTGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRGLLEP*IPVSTA
Trigger: AGCTGTGCTCACTGGTATTCATGGCTCTAACAGACC...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGTCCGTTAGTCAAATTTaGCTCCCCTACACGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRSVSQI*LPYTQL
Trigger: GAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGA...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCTCTCAGGGTCCTGCTaGCATTTTTCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRLSGSC*HFSAIC
Trigger: ACAGATGGCAGAAAAATGTCAGCAGGACCCTGAGAG...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTCTGTCAGTGTACGGATaGCAACAAGCTGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSLSVYG*QQAEAG
Trigger: CCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAG...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTTTCACTTGCCAGAGATaGTGCAGCAGCAGAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSFTCQR*CSSRGS
Trigger: ACTGCCTCTGCTGCTGCAGCATCTCTGGCAAGTGAA...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAACGTCACTGGATTGTaGAACCATATTCCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLNVTGL*NHIPSV
Trigger: AACAGAGGGAATATGGTTGCACAATCCAGTGACGTT...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGGGAATGGCTGGAATCTaGTCGGGAAGCTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRGMAGI*SGSCFQ
Trigger: CTGAAAACAGCTTCCCGAGCAGATTCCAGCCATTCC...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGAAAGGCCATAAGCAGTaGAATCAGCCGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMKGHKQ*NQPPLP
Trigger: GGGCAGAGGCGGCTGATTGCACTGCTTATGGCCTTT...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGACCTGTGACAAAAGCTaGATTGCTCGTGCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRTCDKS*IARARV
Trigger: AACTCGGGCACGAGCAATCCAGCTTTTGTCACAGGT...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGTCCCCATCCATCACCTaGATGAAGCCAAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRSPSIT*MKPKVK
Trigger: CTTCACCTTTGGCTTCATCCAGGTGATGGATGGGGA...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTATGAGGTCTTCTCTCTaGATACCATGGGGATCATTA +
Preference number: 4 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIMRSSL*IPWGSL
Trigger: TAATGATCCCCATGGTATCCAGAGAGAAGACCTCAT...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTAAACTCAGCAAATCGTaGTGTAGAAGCCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIKLSKS*CRSQHS
Trigger: GCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTT...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTGATAGGAGATCTGGCTaGGCACCCAAGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSDRRSG*APKTVS
Trigger: ACTGACAGTCTTGGGTGCCCAGCCAGATCTCCTATC...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTAACTCAGGGCTCAGGTaGGTTGTAGCAGTGCCAATG +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSNSGLR*VVAVPM
Trigger: CATTGGCACTGCTACAACCCACCTGAGCCCTGAGTT...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGGAGCCATCCTGGAATaGCTGGAATCTGCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMGAILE*LESARE
Trigger: TTCCCGAGCAGATTCCAGCCATTCCAGGATGGCTCC...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGACTTGGCAGCAGCGGTaGAAGAAAAGGGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMTWQQR*KKRGSC
Trigger: ACAGCTGCCCCTTTTCTTCCACCGCTGCTGCCAAGT...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTGTCCTGCAAAGCACTTaGCAGCAGCGGTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSVLQST*QQRWKK
Trigger: TTTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGAC...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGTACTTTTCTCAGAACTaGGGGCTCCTTCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRYFSQN*GLLLWH
Trigger: ATGCCAGAGAAGGAGCCCTCAGTTCTGAGAAAAGTA...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTCTGACACTGCTTCCTTaGGCACCAGTCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSLTLLP*APVSSC
Trigger: ACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAG...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGATAGGAGATCTGGCTaGGCACCCAAGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLDRRSG*APKTVS
Trigger: ACTGACAGTCTTGGGTGCCCAGCCAGATCTCCTATC...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTCAAGGTATAGCTGTCTaGTGGAAATACCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIQGIAV*WKYQQL
Trigger: GAGTTGCTGGTATTTCCACCAGACAGCTATACCTTG...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGATGTGTGTCACACTCTaGGCAGCTAACTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMMCVTL*AANSGL
Trigger: GAGCCCTGAGTTAGCTGCCCAGAGTGTGACACACAT...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGGTCTGTTAGAGCCATaGATACCAGTGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMGLLEP*IPVSTA
Trigger: AGCTGTGCTCACTGGTATTCATGGCTCTAACAGACC...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTACTCTCAGGGTCCTGCTaGCATTTTTCTGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLLSGSC*HFSAIC
Trigger: ACAGATGGCAGAAAAATGTCAGCAGGACCCTGAGAG...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTGTAACACTGTATAGTTaGCAGATTTCACATCTGCAG +
Preference number: 4 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFVTLYS*QISHLQ
Trigger: CTGCAGATGTGAAATCTGGCAACTATACAGTGTTAC...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS-3UTR GCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGGAATGGCTGGAATCTaGTCGGGAAGCTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMGMAGI*SGSCFQ
Trigger: CTGAAAACAGCTTCCCGAGCAGATTCCAGCCATTCC...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR GCA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTTCTTTGTACAGCCATaGAACAGAGGCCTAGCATTT +
Preference number: 4 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIFFVQP*NRGLAF
Trigger: AAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CCA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTATCCCCATCCATCACCTaGATGAAGCCAAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLSPSIT*MKPKVK
Trigger: CTTCACCTTTGGCTTCATCCAGGTGATGGATGGGGA...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGTCTCTCTGGATACCATaGGGATCATTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMSLWIP*GSLGGG
Trigger: CCCTCCACCTAATGATCCCCATGGTATCCAGAGAGA...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR TCA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAATCTGTCTGAGGCTCTaGCAGACAGCAATAACGTCA +
Preference number: 4 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLICLRL*QTAITS
Trigger: TGACGTTATTGCTGTCTGTCAGAGCCTCAGACAGAT...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAACCCTTCAAGTAGTTTaGCTTCACATCTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLTLQVV*LHILGS
Trigger: GCTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGT...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CCA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTTGTACATGCACTTCCTaGAAGATGGCTTTAAGCACA +
Preference number: 4 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSCTCTS*KMALST
Trigger: TGTGCTTAAAGCCATCTTCCAGGAAGTGCATGTACA...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CCA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGGTATAGCTGTCTGGTaGAAATACCAGCAACTCTCA +
Preference number: 4 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLGIAVW*KYQQLS
Trigger: TGAGAGTTGCTGGTATTTCCACCAGACAGCTATACC...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR TCA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGATATCGCCCCTTTTCTaGCATATAAATGCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMISPLF*HINARD
Trigger: GTCTCTTGCATTTATATGTCAGAAAAGGGGCGATAT...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR GCA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGTAACACTGTATAGTTaGCAGATTTCACATCTGCAG +
Preference number: 4 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLVTLYS*QISHLQ
Trigger: CTGCAGATGTGAAATCTGGCAACTATACAGTGTTAC...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000438925.7
CDS CCA 90 bp GCGGCCATAACGCGAACTAGAGACCGTGGGAGGGGATATGGGCGGTaGCTCGAGACGGGCTCTCCGCGCATGCGCCTCCCGAGCCAATCT +
Preference number: 5 (lower is better)
Translates to: AAITRTRDRGRGYGR*LETGSPRMRLPSQS
Trigger: AGATTGGCTCGGGAGGCGCATGCGCGGAGAGCCCGTCTCGAGCCACCGCCCATATCCCCTCCCACGGTCTCTAGTTCGCGTTATGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS-3UTR CAA 90 bp GACTCCCCTACACGCAGCTCCTCAGCGAGCTTGGGTACGAGGTGGCTGCTGAAGAGCTCCTCAGCGAGCTaGGGTACGAGGTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DSPTRSSSASLGTRWLLKSSSAS*GTRWLL
Trigger: CAGCAGCCACCTCGTACCCAAGCTCGCTGAGGAGCT...CTTCAGCAGCCACCTCGTACCCAAGCTCGCTGAGGAGCTGCGTGTAGGGGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CAA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGTCAGCGGGGCCCTCTaGCTGACCCACGACGAAGTC +
Preference number: 5 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISVSGAL*LTHDEV
Trigger: GACTTCGTCGTGGGTCAGCAAGAGGGCCCCGCTGAC...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp GACTCCCCTACACGCAGCTCCTCAGCGAGCTTGGGTACGAGGTGGCTGCTGAAGCAGATGCCGGGAGCATaGGGTGGGCTCATCTCCGTT +
Preference number: 5 (lower is better)
Translates to: DSPTRSSSASLGTRWLLKQMPGA*GGLISV
Trigger: AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTG...CTTCAGCAGCCACCTCGTACCCAAGCTCGCTGAGGAGCTGCGTGTAGGGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CAA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCAGATGCCGGGAGCATaGGGTGGGCTCATCTCCGTT +
Preference number: 5 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPQMPGA*GGLISV
Trigger: AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTG...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATCTCCGTTCCTCCACCCGCTCACTaGCCGTCTGGAACACCTCTC +
Preference number: 5 (lower is better)
Translates to: QGLQTAQMPGALGGLISVPPPAH*PSGTPL
Trigger: GAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAGG...AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS CCA 90 bp CCACTAGCTGGTATCTGTGGCAGGCGGAGTTCCCTCTCTTGGCTTTaGAGCCCCGCTCTGTCTCTGTACAGGGGAGCTTCTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PLAGICGRRSSLSWL*SPALSLYRGASSSS
Trigger: GGAGGAGGAAGAAGCTCCCCTGTACAGAGACAGAGCGGGGCTCCAAAGCCAAGAGAGGGAACTCCGCCTGCCACAGATACCAGCTAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422685.5
CDS-3UTR CAA 90 bp GGCACTAGGCCACACCAGTTTCATGTCCGGTTCACACAGGTGGTGCCTGCAGTCCAGATGCCGGGAGCATaGGGTGGGCTCATCTCCGTT +
Preference number: 5 (lower is better)
Translates to: GTRPHQFHVRFTQVVPAVQMPGA*GGLISV
Trigger: AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTG...GACTGCAGGCACCACCTGTGTGAACCGGACATGAAACTGGTGTGGCCTAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCGGCAGAAAGGACACGTaGCCATCCAAGAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: LVLRATLICTHPSAAYRPGRKDT*PSKKRG
Trigger: GCCCCTCTTCTTGGATGGCAACGTGTCCTTTCTGCC...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCCTGCAGGGTGCTTGTaGAGGAGTCCTGCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPPAGCL*RSPAKH
Trigger: GTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAGG...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCTGCCCTGCAGGGTGCTaGTTGAGGAGTCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPCPAGC*LRSPAK
Trigger: CTTTGCAGGACTCCTCAACAAGCACCCTGCAGGGCA...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCCGAATCACCTGTGGTTaGTACGGCAGCAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: LVLRATLICTHPSAAYRPRITCG*YGSSTG
Trigger: CCCTGTGCTGCTGCCGTACAAACCACAGGTGATTCG...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS CCA 90 bp GGTGTACCACTAGCTGGTATCTGTGGCAGGCGGAGTTCCCTCTCTTaGCTTTGGAGCCCCGCTCTGTCTCTGTACAGGGGAGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GVPLAGICGRRSSLS*LWSPALSLYRGASS
Trigger: GGAAGAAGCTCCCCTGTACAGAGACAGAGCGGGGCTCCAAAGCCAAGAGAGGGAACTCCGCCTGCCACAGATACCAGCTAGTGGTACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422685.5
CDS-3UTR CAA 90 bp GCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGTGTGACAAAAGCTGGATaGCTCGTGCCCGAGTTCGGG +
Preference number: 5 (lower is better)
Translates to: ALSTETASPGGRATHRLSVTKAG*LVPEFG
Trigger: CCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCAC...ACTTAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000415383.5
ENST00000441194.5
ENST00000448660.5
CDS-3UTR CAA 90 bp CTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATCTCGGAGCATTTCAAGGATaGTCCGCCGCTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LTRLADSTDAGSIGWAHLGAFQG*SAAGCS
Trigger: AGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCC...GAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CAA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGGGAGCATTTCAAGGATaGTCCGCCGCTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISGAFQG*SAAGCS
Trigger: AGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCC...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCAGTCCTGCAAAGCACTaGGCAGCAGCGGTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPSPAKH*AAAVEE
Trigger: TTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGACT...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTGAGGTTCAGAAACTaGGTGACGAGGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPLRFRN*VTRVST
Trigger: CGTGGACACCCTCGTCACCAAGTTTCTGAACCTCAG...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCGCTGACACTGCTTCCTaGCGCACCAGTCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LVLRATLICTHPSAAYRPADTAS*RTSLFL
Trigger: CAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGC...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp TCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCTTGGGTACGAGGTGGCGCTGCCTGCAACAGCTaGGCACTAGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: SNLTPLHAAPQRAWVRGGAACNS*ALGHTS
Trigger: ACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGC...GCCACCTCGTACCCAAGCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CAA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACGTCAGCGGGGCCCTCTaGCTGACCCACGACGAAGTC +
Preference number: 5 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDVSGAL*LTHDEV
Trigger: GACTTCGTCGTGGGTCAGCAAGAGGGCCCCGCTGAC...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTGAGCACAGCTGGTCCTaGAAGCCATTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPEHSWS*KPFRGL
Trigger: AAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCTC...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAAGCTCCTCAGCGAGCTaGGGTACGAGGTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LYSSAGRQHLPALVLRATSSSAS*GTRWLL
Trigger: CAGCAGCCACCTCGTACCCAAGCTCGCTGAGGAGCT...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAGGGGCAGCAGAAACTCAGCAAATCGTGGTGTAGAAGCCAGCACAGCGCGAAGGGCAGAAAGGACACGTaGCCATCCAAGAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: QGQQKLSKSWCRSQHSAKGRKDT*PSKKRG
Trigger: GCCCCTCTTCTTGGATGGCAACGTGTCCTTTCTGCC...CTTCGCGCTGTGCTGGCTTCTACACCACGATTTGCTGAGTTTCTGCTGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCAAGCTCCCGCATGAGTaGGTTCAGCTGAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPKLPHE*VQLRDF
Trigger: GAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTT...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCAGTCCTGCAAAGCACTaGGCAGCAGCGGTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: QPWSSGPHSYALTPQQHISPAKH*AAAVEE
Trigger: TTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGACT...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGTTTGGCTTCACATCTaGGGGAGCAGCATGGAAGCC +
Preference number: 5 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIVWLHI*GSSMEA
Trigger: GGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAAC...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCGGCAAGAGTACAGGCTaGGGCAGCCTGTTAAGTACA +
Preference number: 5 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPGKSTG*GSLLST
Trigger: TGTACTTAACAGGCTGCCCAAGCCTGTACTCTTGCC...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCTGAGGTTCAGAAACTaGGTGACGAGGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISLRFRN*VTRVST
Trigger: CGTGGACACCCTCGTCACCAAGTTTCTGAACCTCAG...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGTTGTCATCCAGGGGTTaGGCTAAGGCCCGAATCACC +
Preference number: 5 (lower is better)
Translates to: SPGPQGHTHMHSPLSSISLSSRG*AKARIT
Trigger: GGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAA...CGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp CAGCTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATTTGTCATCCAGGGGTTaGGCTAAGGCCCGAATCACC +
Preference number: 5 (lower is better)
Translates to: QLTRLADSTDAGSIGWAHLSSRG*AKARIT
Trigger: GGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAA...ATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCTTGTCATCCAGGGGTTaGGCTAAGGCCCGAATCACC +
Preference number: 5 (lower is better)
Translates to: QPWSSGPHSYALTPQQHILSSRG*AKARIT
Trigger: GGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAA...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTGCTGACACTGCTTCCTaGCGCACCAGTCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPADTAS*RTSLFL
Trigger: CAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGC...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp GGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCGTGACAAAAGCTGGATaGCTCGTGCCCGAGTTCGGG +
Preference number: 5 (lower is better)
Translates to: GSSPLVKFDSPTRSSSASVTKAG*LVPEFG
Trigger: CCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCAC...GCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp AGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGTGCCTTCAAACCCTGCAGTGTAGAGAATCCAACTaGGCACTCAGAACCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SQPWGQGHTQAKCLQTLQCRESN*ALRTSE
Trigger: TTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTACA...CTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
CDS-3UTR CAA 90 bp CTTCCAGTGCTGCCACCCTGCAACTCTGGGAATCCTCCTTCAGGAAGCTCAGTCGAGCACAGCTGGTCCTaGAAGCCATTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: LPVLPPCNSGNPPSGSSVEHSWS*KPFRGL
Trigger: AAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCTC...GACTGAGCTTCCTGAAGGAGGATTCCCAGAGTTGCAGGGTGGCAGCACTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS-3UTR CAA 90 bp CCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCGATGCTGGGATGTGTaGATACAGCTGACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: PGPQGHTHMHSPLSSISPRCWDV*IQLTRL
Trigger: AAGCCTTGTCAGCTGTATCAACACATCCCAGCATCG...GGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCAGAGGCAGTGTCTCCTaGACGATGCTGGGATGTGTT +
Preference number: 5 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIRGSVS*TMLGCV
Trigger: AACACATCCCAGCATCGTCAAGGAGACACTGCCTCT...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TTGATACAGCTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGCCTGCAGGGTGCTTGTaGAGGAGTCCTGCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: LIQLTRLADSTDAGSIGWPAGCL*RSPAKH
Trigger: GTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAGG...CCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTGTATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: QPWSSGPHSYALTPQQHISGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTCCTCCACCCGCTCACTaGCCGTCTGGAACACCTCTC +
Preference number: 5 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLPPPAH*PSGTPL
Trigger: GAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAGG...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGCTGCCTGCAACAGCTaGGCACTAGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRAACNS*ALGHTS
Trigger: ACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGC...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATCTCCGTTAGTCAAATTGCTGCCTGCAACAGCTaGGCACTAGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: QTAQMPGALGGLISVSQIAACNS*ALGHTS
Trigger: ACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGC...AATTTGACTAACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS CCA 90 bp GACCTTCTTTCAGACTCCTCACCTTGGGGAGCAGCATGGAAGCCCTaGACCAAAGCAGGCACATTATCTGTGAAGAACCGCTGGCGGAAC +
Preference number: 5 (lower is better)
Translates to: DLLSDSSPWGAAWKP*TKAGTLSVKNRWRN
Trigger: GTTCCGCCAGCGGTTCTTCACAGATAATGTGCCTGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGGTGAGGAGTCTGAAAGAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485400.1
CDS-3UTR CAA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGAGCTCCTCAGCGAGCTaGGGTACGAGGTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERSSSAS*GTRWLL
Trigger: CAGCAGCCACCTCGTACCCAAGCTCGCTGAGGAGCT...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCCGATGCTGGGATGTGTaGATACAGCTGACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIRCWDV*IQLTRL
Trigger: AAGCCTTGTCAGCTGTATCAACACATCCCAGCATCG...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGCAGTAAAGGCAGTACATTGCTGGTGACAGAGTCACAGGCCCGGGCAGATGCAAGTCCTGCAAAGCACTaGGCAGCAGCGGTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: SSKGSTLLVTESQARADASPAKH*AAAVEE
Trigger: TTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGACT...TGCATCTGCCCGGGCCTGTGACTCTGTCACCAGCAATGTACTGCCTTTACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCCCTGCAGGGTGCTTGTaGAGGAGTCCTGCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: CNRGLAFVLCLWERQSETPAGCL*RSPAKH
Trigger: GTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAGG...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCTGCCCTGCAGGGTGCTaGTTGAGGAGTCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: CNRGLAFVLCLWERQSETCPAGC*LRSPAK
Trigger: CTTTGCAGGACTCCTCAACAAGCACCCTGCAGGGCA...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAGTTTGGCTTCACATCTaGGGGAGCAGCATGGAAGCC +
Preference number: 5 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSVWLHI*GSSMEA
Trigger: GGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAAC...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ACTTCCTGGAAGATGGCTTTAAGCACAGAAACAGCCAGCCCTGGGGGCAGGGCCGACCCTTCAAGTAGTTaGGCTTCACATCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: TSWKMALSTETASPGGRADPSSS*ASHLGE
Trigger: CTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGTC...GGCCCTGCCCCCAGGGCTGGCTGTTTCTGTGCTTAAAGCCATCTTCCAGGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp CCTCCTTCAGGAAGCTCAGTCTGTACAGGTGACCCACTGCCAGCTCCAAGTCCTGGCAAGAGTACAGGCTaGGGCAGCCTGTTAAGTACA +
Preference number: 5 (lower is better)
Translates to: PPSGSSVCTGDPLPAPSPGKSTG*GSLLST
Trigger: TGTACTTAACAGGCTGCCCAAGCCTGTACTCTTGCC...AGGACTTGGAGCTGGCAGTGGGTCACCTGTACAGACTGAGCTTCCTGAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp ACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTCCTCCACCCGCTCACTaGCCGTCTGGAACACCTCTC +
Preference number: 5 (lower is better)
Translates to: TGCHFKQLLHKGSQAIVPPPPAH*PSGTPL
Trigger: GAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAGG...AGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp CTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTGTAGAGAATCCAACTaGGCACTCAGAACCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LVLRATLICTHPSAAYRPCRESN*ALRTSE
Trigger: TTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTACA...GGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGAAACAGCCAGCCCTGGGGGCAGGGCCACACACAGGCTAAGTGCCTTCAAACCTGTAGAGAATCCAACTaGGCACTCAGAACCTCAGAA +
Preference number: 5 (lower is better)
Translates to: RNSQPWGQGHTQAKCLQTCRESN*ALRTSE
Trigger: TTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTACA...GGTTTGAAGGCACTTAGCCTGTGTGTGGCCCTGCCCCCAGGGCTGGCTGTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
CDS-3UTR CAA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCGAGCACAGCTGGTCCTaGAAGCCATTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: CNRGLAFVLCLWERQSETEHSWS*KPFRGL
Trigger: AAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCTC...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGCTCCTCAGCGAGCTaGGGTACGAGGTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWESSSAS*GTRWLL
Trigger: CAGCAGCCACCTCGTACCCAAGCTCGCTGAGGAGCT...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGATGCCGGGAGCATaGGGTGGGCTCATCTCCGTT +
Preference number: 5 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERQMPGA*GGLISV
Trigger: AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTG...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCAAGAGGCAGTGTCTCCTaGACGATGCTGGGATGTGTT +
Preference number: 5 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSRGSVS*TMLGCV
Trigger: AACACATCCCAGCATCGTCAAGGAGACACTGCCTCT...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTATAGTCCCTGGAGGCCAGCCTCCACTTaGTCCACAGCTAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: RMSLQTTPPQRVPGYSPWRPAST*STASCR
Trigger: CCTACAGCTAGCTGTGGACAAAGTGGAGGCTGGCCT...CCAGGGACTATAGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAGGCCAGCCTCCACTTaGTCCACAGCTAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: CTAMQQRPSICAVSVGKARPAST*STASCR
Trigger: CCTACAGCTAGCTGTGGACAAAGTGGAGGCTGGCCT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCCGAATCACCTGTGGTTaGTACGGCAGCAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: NLYSSAGRQHLPALVLRARITCG*YGSSTG
Trigger: CCCTGTGCTGCTGCCGTACAAACCACAGGTGATTCG...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCCGCACCAGTCTCTTCTaGTCATCCAGGGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: CNRGLAFVLCLWERQSETRTSLF*SSRGLA
Trigger: AGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCG...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAGCTGACACTGCTTCCTaGCGCACCAGTCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LYSSAGRQHLPALVLRATADTAS*RTSLFL
Trigger: CAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGC...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCGCTGACACTGCTTCCTaGCGCACCAGTCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: CNRGLAFVLCLWERQSETADTAS*RTSLFL
Trigger: CAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGC...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGCCTCCACCCGCTCACTaGCCGTCTGGAACACCTCTC +
Preference number: 5 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRPPPAH*PSGTPL
Trigger: GAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAGG...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTCAGTCCTGTAGAATGTaGCTAAGGAAGGAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPQSCRM*LRKESR
Trigger: CCTTGACTCCTTCCTTAGCAACATTCTACAGGACTG...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATCTCCGTTCAGTCCTGTAGAATGTaGCTAAGGAAGGAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: QGLQTAQMPGALGGLISVQSCRM*LRKESR
Trigger: CCTTGACTCCTTCCTTAGCAACATTCTACAGGACTG...AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CAA 90 bp CAGCTGACAAGGCTTGCAGACAGCACAGATGCCGGGAGCATTGGGTGGGCTCATAGTAAAGGCAGTACATaGCTGGTGACAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: QLTRLADSTDAGSIGWAHSKGST*LVTESQ
Trigger: CTGTGACTCTGTCACCAGCAATGTACTGCCTTTACT...ATGAGCCCACCCAATGCTCCCGGCATCTGTGCTGTCTGCAAGCCTTGTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS CCA 90 bp CCTTTGCTTAGAAGCTCTGCCTGTGGGACTTACCGTGGGCAGCTCTaGCAAGAGTACAGGCTTGGGCAGCCTGTTAAGTACATGAGAAAG +
Preference number: 5 (lower is better)
Translates to: PLLRSSACGTYRGQL*QEYRLGQPVKYMRK
Trigger: CTTTCTCATGTACTTAACAGGCTGCCCAAGCCTGTACTCTTGCCAGAGCTGCCCACGGTAAGTCCCACAGGCAGAGCTTCTAAGCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485400.1
CDS-3UTR CAA 90 bp CAGCCGGTTCTCATAGAACAGTATCAGGTGTACCACTTCCTTCTCCAGGAGCAAGTGACAAAAGCTGGATaGCTCGTGCCCGAGTTCGGG +
Preference number: 5 (lower is better)
Translates to: QPVLIEQYQVYHFLLQEQVTKAG*LVPEFG
Trigger: CCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCAC...TTGCTCCTGGAGAAGGAAGTGGTACACCTGATACTGTTCTATGAGAACCGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000441194.5
CDS-3UTR CAA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTTGTAGAGAATCCAACTaGGCACTCAGAACCTCAGAA +
Preference number: 5 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPCRESN*ALRTSE
Trigger: TTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTACA...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAGCCCTGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCATTCAGAGGCCTTaGATCTTTGTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: QPWSSGPHSYALTPQQHIAIQRP*IFVFIA
Trigger: AGCTATGAAGACAAAGATCAAAGGCCTCTGAATGGC...GATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGAGCACAGCTGGTCCTaGAAGCCATTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAEHSWS*KPFRGL
Trigger: AAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCTC...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CACACACAGGCTAAGTGCCTTCAAACCCTGCAGGACAGATGGGATCACAAGATGGAGCACAGCTGGTCCTaGAAGCCATTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: HTQAKCLQTLQDRWDHKMEHSWS*KPFRGL
Trigger: AAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCTC...CATCTTGTGATCCCATCTGTCCTGCAGGGTTTGAAGGCACTTAGCCTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATAGCTCCTCAGCGAGCTaGGGTACGAGGTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYSSSAS*GTRWLL
Trigger: CAGCAGCCACCTCGTACCCAAGCTCGCTGAGGAGCT...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGAGCTCCTCAGCGAGCTaGGGTACGAGGTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVSSSAS*GTRWLL
Trigger: CAGCAGCCACCTCGTACCCAAGCTCGCTGAGGAGCT...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGCAGATGCCGGGAGCATaGGGTGGGCTCATCTCCGTT +
Preference number: 5 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRQMPGA*GGLISV
Trigger: AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTG...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCACGATGCTGGGATGTGTaGATACAGCTGACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSRCWDV*IQLTRL
Trigger: AAGCCTTGTCAGCTGTATCAACACATCCCAGCATCG...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp GGCTCATCTCCGTTAGTCAAATTTGACTCCCCTACACGCAGCTCCTCAGCGAGCCGATGCTGGGATGTGTaGATACAGCTGACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: GSSPLVKFDSPTRSSSASRCWDV*IQLTRL
Trigger: AAGCCTTGTCAGCTGTATCAACACATCCCAGCATCG...GCTCGCTGAGGAGCTGCGTGTAGGGGAGTCAAATTTGACTAACGGAGATGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAAGAGGCAGTGTCTCCTaGACGATGCTGGGATGTGTT +
Preference number: 5 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRRGSVS*TMLGCV
Trigger: AACACATCCCAGCATCGTCAAGGAGACACTGCCTCT...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGAGGCAGTGTCTCCTaGACGATGCTGGGATGTGTT +
Preference number: 5 (lower is better)
Translates to: CNRGLAFVLCLWERQSETRGSVS*TMLGCV
Trigger: AACACATCCCAGCATCGTCAAGGAGACACTGCCTCT...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCATTCCCTCTGTTCACTaGCCAGAGATGCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: CNRGLAFVLCLWERQSETIPSVH*PEMLQQ
Trigger: CTGCTGCAGCATCTCTGGCAAGTGAACAGAGGGAAT...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGGGCAGAAAGGACACGTaGCCATCCAAGAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERGRKDT*PSKKRG
Trigger: GCCCCTCTTCTTGGATGGCAACGTGTCCTTTCTGCC...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTTTGGCTTCACATCTaGGGGAGCAGCATGGAAGCC +
Preference number: 5 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAVWLHI*GSSMEA
Trigger: GGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAAC...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCACTGAGGTTCAGAAACTaGGTGACGAGGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: CTAMQQRPSICAVSVGKALRFRN*VTRVST
Trigger: CGTGGACACCCTCGTCACCAAGTTTCTGAACCTCAG...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCTTGTCATCCAGGGGTTaGGCTAAGGCCCGAATCACC +
Preference number: 5 (lower is better)
Translates to: NLYSSAGRQHLPALVLRALSSRG*AKARIT
Trigger: GGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAA...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTCGCACCAGTCTCTTCTaGTCATCCAGGGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLRTSLF*SSRGLA
Trigger: AGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCG...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCGCACCAGTCTCTTCTaGTCATCCAGGGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDRTSLF*SSRGLA
Trigger: AGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCG...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCACGCACCAGTCTCTTCTaGTCATCCAGGGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: CTAMQQRPSICAVSVGKARTSLF*SSRGLA
Trigger: AGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCG...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTGCTGACACTGCTTCCTaGCGCACCAGTCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLADTAS*RTSLFL
Trigger: CAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGC...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: LYSSAGRQHLPALVLRATSGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp GATGAGGTCATGGACGATGCGGAAGGCCACCAGAAGATTACGGGGATCCTTTTCAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: DEVMDDAEGHQKITGILFSGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...GAAAAGGATCCCCGTAATCTTCTGGTGGCCTTCCGCATCGTCCATGACCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp TGGTCCTCAGGGCCACACTCATATGCACTCACCCCTCAGCAGCATATCGCCCCTGGACTCTTATGTTCTTaGTACAGCCATGCAACAGAG +
Preference number: 5 (lower is better)
Translates to: WSSGPHSYALTPQQHIAPGLLCS*YSHATE
Trigger: CTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCC...AGGGGCGATATGCTGCTGAGGGGTGAGTGCATATGAGTGTGGCCCTGAGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS GCA 90 bp GCTTCAAGAAACCCAGGAGCATTTCAAGGATTGTCCGCCGCTGGCTaGTCTGTAACGTTTCAAGGGGTACTGACTGTGCTTGTGGAACTG +
Preference number: 5 (lower is better)
Translates to: ASRNPGAFQGLSAAG*SVTFQGVLTVLVEL
Trigger: CAGTTCCACAAGCACAGTCAGTACCCCTTGAAACGTTACAGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCCTGGGTTTCTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS CCA 90 bp TGCAGCTTCAAGAAACCCAGGAGCATTTCAAGGATTGTCCGCCGCTaGCTGCTCTGTAACGTTTCAAGGGGTACTGACTGTGCTTGTGGA +
Preference number: 5 (lower is better)
Translates to: CSFKKPRSISRIVRR*LLCNVSRGTDCACG
Trigger: TCCACAAGCACAGTCAGTACCCCTTGAAACGTTACAGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCCTGGGTTTCTTGAAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS-3UTR CAA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTGTCAGCGGGGCCCTCTaGCTGACCCACGACGAAGTC +
Preference number: 5 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFVSGAL*LTHDEV
Trigger: GACTTCGTCGTGGGTCAGCAAGAGGGCCCCGCTGAC...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGTGACAAAAGCTGGATaGCTCGTGCCCGAGTTCGGG +
Preference number: 5 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRVTKAG*LVPEFG
Trigger: CCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCAC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGGAGCATTTCAAGGATaGTCCGCCGCTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWGAFQG*SAAGCS
Trigger: AGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCC...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGGAGCATTTCAAGGATaGTCCGCCGCTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRGAFQG*SAAGCS
Trigger: AGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp GGACAGATGGGATCACAAGATGATGGTCCTTCAGCCGGTTCTCATAGAACAGTAGGAGCATTTCAAGGATaGTCCGCCGCTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GQMGSQDDGPSAGSHRTVGAFQG*SAAGCS
Trigger: AGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCC...TACTGTTCTATGAGAACCGGCTGAAGGACCATCATCTTGTGATCCCATCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp TGGCTGGGCACCCAAGACTGTCAGTGTACGGATGCCAACAAGCTGAAGCTGGGTGCCATTCAGAGGCCTTaGATCTTTGTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: WLGTQDCQCTDANKLKLGAIQRP*IFVFIA
Trigger: AGCTATGAAGACAAAGATCAAAGGCCTCTGAATGGC...ACCCAGCTTCAGCTTGTTGGCATCCGTACACTGACAGTCTTGGGTGCCCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415383.5
ENST00000434392.5
CDS-3UTR CAA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGCTCCTCAGCGAGCTaGGGTACGAGGTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLSSSAS*GTRWLL
Trigger: CAGCAGCCACCTCGTACCCAAGCTCGCTGAGGAGCT...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGCAGATGCCGGGAGCATaGGGTGGGCTCATCTCCGTT +
Preference number: 5 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVQMPGA*GGLISV
Trigger: AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTG...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACGATGCTGGGATGTGTaGATACAGCTGACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: LYSSAGRQHLPALVLRATRCWDV*IQLTRL
Trigger: AAGCCTTGTCAGCTGTATCAACACATCCCAGCATCG...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp GCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGACGATGCTGGGATGTGTaGATACAGCTGACAAGGCTT +
Preference number: 5 (lower is better)
Translates to: AMQQRPSICAVSVGKAVRRCWDV*IQLTRL
Trigger: AAGCCTTGTCAGCTGTATCAACACATCCCAGCATCG...TCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCATTCCCTCTGTTCACTaGCCAGAGATGCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAIPSVH*PEMLQQ
Trigger: CTGCTGCAGCATCTCTGGCAAGTGAACAGAGGGAAT...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACATTCCCTCTGTTCACTaGCCAGAGATGCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: MQQRPSICAVSVGKAVRDIPSVH*PEMLQQ
Trigger: CTGCTGCAGCATCTCTGGCAAGTGAACAGAGGGAAT...GTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGGCAGAAAGGACACGTaGCCATCCAAGAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWGRKDT*PSKKRG
Trigger: GCCCCTCTTCTTGGATGGCAACGTGTCCTTTCTGCC...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAAGCTCCCGCATGAGTaGGTTCAGCTGAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: CTAMQQRPSICAVSVGKAKLPHE*VQLRDF
Trigger: GAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCAAGCTCCCGCATGAGTaGGTTCAGCTGAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAKLPHE*VQLRDF
Trigger: GAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTT...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGTGCCCTGCAGGGTGCTaGTTGAGGAGTCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRCPAGC*LRSPAK
Trigger: CTTTGCAGGACTCCTCAACAAGCACCCTGCAGGGCA...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGAGGCCAGCCTCCACTTaGTCCACAGCTAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWRPAST*STASCR
Trigger: CCTACAGCTAGCTGTGGACAAAGTGGAGGCTGGCCT...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACAGACCCTTCAAGTAGTTaGGCTTCACATCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: LYSSAGRQHLPALVLRATDPSSS*ASHLGE
Trigger: CTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGTC...TGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCGGCAAGAGTACAGGCTaGGGCAGCCTGTTAAGTACA +
Preference number: 5 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAGKSTG*GSLLST
Trigger: TGTACTTAACAGGCTGCCCAAGCCTGTACTCTTGCC...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp ATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCGAATCACCTGTGGTTaGTACGGCAGCAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: MFFVQPCNRGLAFVLCLWRITCG*YGSSTG
Trigger: CCCTGTGCTGCTGCCGTACAAACCACAGGTGATTCG...CCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGCGAATCACCTGTGGTTaGTACGGCAGCAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRRITCG*YGSSTG
Trigger: CCCTGTGCTGCTGCCGTACAAACCACAGGTGATTCG...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: NLYSSAGRQHLPALVLRASGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTCCTCCACCCGCTCACTaGCCGTCTGGAACACCTCTC +
Preference number: 5 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIPPPAH*PSGTPL
Trigger: GAGAGGTGTTCCAGACGGCAAGTGAGCGGGTGGAGG...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCACACTCACAGTCCTGTAGAATGTaGCTAAGGAAGGAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: ILQQVDNICQPWSSGPHSQSCRM*LRKESR
Trigger: CCTTGACTCCTTCCTTAGCAACATTCTACAGGACTG...TGAGTGTGGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCTGCCTGCAACAGCTaGGCACTAGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVAACNS*ALGHTS
Trigger: ACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGC...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS TCA 90 bp TTGCCTATTAAACTCTCTGCTCCTTCCTTCTCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGTGACAAAAGCTGGATTGCTCGTGCC +
Preference number: 5 (lower is better)
Translates to: LPIKLSAPSFSRSKV*QWSSTCDKSWIARA
Trigger: GGCACGAGCAATCCAGCTTTTGTCACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGAGAAGGAAGGAGCAGAGAGTTTAATAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422685.5
CDS TCA 90 bp TTCCTATTAGTGACACCAGTACCTTCCTTCTCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGTGACAAAAGCTGGATTGCTCGTGCC +
Preference number: 5 (lower is better)
Translates to: FLLVTPVPSFSRSKV*QWSSTCDKSWIARA
Trigger: GGCACGAGCAATCCAGCTTTTGTCACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGAGAAGGAAGGTACTGGTGTCACTAATAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448660.5
CDS TCA 90 bp ACTCCAAGAGAACCAGTACATAGTGGCAGCAGGGACCGGGACGGATaGGAACTAACTTCTCTGGTGGGGGAAGTAAAAGATCAGCTTAGC +
Preference number: 5 (lower is better)
Translates to: TPREPVHSGSRDRDG*ELTSLVGEVKDQLS
Trigger: GCTAAGCTGATCTTTTACTTCCCCCACCAGAGAAGTTAGTTCTCATCCGTCCCGGTCCCTGCTGCCACTATGTACTGGTTCTCTTGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478452.1
ENST00000495415.5
CDS GCA 90 bp CTAGACTCTTTGTGCTCCCTTCTCTTCTTAGGTACTATAAAGCTCTaGCCAACTGTGGTCTTGACGCTTTTCCCACGGGCAGTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LDSLCSLLFLGTIKL*PTVVLTLFPRAVPG
Trigger: TCCTGGGACTGCCCGTGGGAAAAGCGTCAAGACCACAGTTGGGCAGAGCTTTATAGTACCTAAGAAGAGAAGGGAGCACAAAGAGTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480108.1
CDS-3UTR CAA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTGTCAGCGGGGCCCTCTaGCTGACCCACGACGAAGTC +
Preference number: 5 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIVSGAL*LTHDEV
Trigger: GACTTCGTCGTGGGTCAGCAAGAGGGCCCCGCTGAC...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAGAGCACAGCTGGTCCTaGAAGCCATTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLEHSWS*KPFRGL
Trigger: AAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCTC...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAGCCGGTTCTCATAGAACAGTATCAGGTGTACCACTTCCTTCTCCAGGAGCAAAGAGGCAGTGTCTCCTaGACGATGCTGGGATGTGTT +
Preference number: 5 (lower is better)
Translates to: QPVLIEQYQVYHFLLQEQRGSVS*TMLGCV
Trigger: AACACATCCCAGCATCGTCAAGGAGACACTGCCTCT...TTGCTCCTGGAGAAGGAAGTGGTACACCTGATACTGTTCTATGAGAACCGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGATTCCCTCTGTTCACTaGCCAGAGATGCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERIPSVH*PEMLQQ
Trigger: CTGCTGCAGCATCTCTGGCAAGTGAACAGAGGGAAT...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGTCCTGCAAAGCACTaGGCAGCAGCGGTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWESPAKH*AAAVEE
Trigger: TTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGACT...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATCCTGCAGGGTGCTTGTaGAGGAGTCCTGCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYPAGCL*RSPAKH
Trigger: GTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAGG...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAGTGGTTTCCCTGCTTTGGGGAAGATGGCTCAACAGTTAGTAATCCCAGGTTAGTTTGGCTTCACATCTaGGGGAGCAGCATGGAAGCC +
Preference number: 5 (lower is better)
Translates to: QWFPCFGEDGSTVSNPRLVWLHI*GSSMEA
Trigger: GGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAAC...TAACCTGGGATTACTAACTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGGGAAATAACAGGATGTCACTTCAAACAACTCCTCCACAAAGGGTCCCAGGCTGTTTGGCTTCACATCTaGGGGAGCAGCATGGAAGCC +
Preference number: 5 (lower is better)
Translates to: REITGCHFKQLLHKGSQAVWLHI*GSSMEA
Trigger: GGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAAC...AGCCTGGGACCCTTTGTGGAGGAGTTGTTTGAAGTGACATCCTGTTATTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGCGAATCACCTGTGGTTaGTACGGCAGCAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVRITCG*YGSSTG
Trigger: CCCTGTGCTGCTGCCGTACAAACCACAGGTGATTCG...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTGCTGCCTGCAACAGCTaGGCACTAGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIAACNS*ALGHTS
Trigger: ACTGGTGTGGCCTAGTGCCAAGCTGTTGCAGGCAGC...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTAAAGGCAGTACATaGCTGGTGACAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: CNRGLAFVLCLWERQSETSKGST*LVTESQ
Trigger: CTGTGACTCTGTCACCAGCAATGTACTGCCTTTACT...GGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS GCA 90 bp ACTAGCCCCACTGTAGGGAGTAGGACGGCAGAACTAGACTCTTTGTaGTCCCTTCTCTTCTTAGGTACTATAAAGCTCTGCCCAACTGTG +
Preference number: 5 (lower is better)
Translates to: TSPTVGSRTAELDSL*SLLFLGTIKLCPTV
Trigger: CACAGTTGGGCAGAGCTTTATAGTACCTAAGAAGAGAAGGGAGCACAAAGAGTCTAGTTCTGCCGTCCTACTCCCTACAGTGGGGCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480108.1
CDS CCA 90 bp CCGCATGAGTTGGTTCAGCTGAGGGATTTCCACCTACAGAAAACCTaGCCATGTAATGGACCCAGAGAACACTTGAACTCCAAGAGAACC +
Preference number: 5 (lower is better)
Translates to: PHELVQLRDFHLQKT*PCNGPREHLNSKRT
Trigger: GGTTCTCTTGGAGTTCAAGTGTTCTCTGGGTCCATTACATGGCCAGGTTTTCTGTAGGTGGAAATCCCTCAGCTGAACCAACTCATGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478452.1
ENST00000495415.5
CDS-3UTR CAA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGTGACAAAAGCTGGATaGCTCGTGCCCGAGTTCGGG +
Preference number: 5 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLVTKAG*LVPEFG
Trigger: CCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCAC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGATTCCCTCTGTTCACTaGCCAGAGATGCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRIPSVH*PEMLQQ
Trigger: CTGCTGCAGCATCTCTGGCAAGTGAACAGAGGGAAT...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGGCAGAAAGGACACGTaGCCATCCAAGAAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLGRKDT*PSKKRG
Trigger: GCCCCTCTTCTTGGATGGCAACGTGTCCTTTCTGCC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAAGCTCCCGCATGAGTaGGTTCAGCTGAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWEKLPHE*VQLRDF
Trigger: GAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTT...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGAAGCTCCCGCATGAGTaGGTTCAGCTGAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRKLPHE*VQLRDF
Trigger: GAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTT...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAAGGCCAGCCTCCACTTaGTCCACAGCTAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: KEIFILQQVDNICQPWSSRPAST*STASCR
Trigger: CCTACAGCTAGCTGTGGACAAAGTGGAGGCTGGCCT...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGGACCCTTCAAGTAGTTaGGCTTCACATCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERDPSSS*ASHLGE
Trigger: CTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGTC...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAGGCAAGAGTACAGGCTaGGGCAGCCTGTTAAGTACA +
Preference number: 5 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWEGKSTG*GSLLST
Trigger: TGTACTTAACAGGCTGCCCAAGCCTGTACTCTTGCC...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGGCAAGAGTACAGGCTaGGGCAGCCTGTTAAGTACA +
Preference number: 5 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRGKSTG*GSLLST
Trigger: TGTACTTAACAGGCTGCCCAAGCCTGTACTCTTGCC...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCACGAATCACCTGTGGTTaGTACGGCAGCAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: KEIFILQQVDNICQPWSSRITCG*YGSSTG
Trigger: CCCTGTGCTGCTGCCGTACAAACCACAGGTGATTCG...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCCGAATCACCTGTGGTTaGTACGGCAGCAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLRITCG*YGSSTG
Trigger: CCCTGTGCTGCTGCCGTACAAACCACAGGTGATTCG...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGTTGTCATCCAGGGGTTaGGCTAAGGCCCGAATCACC +
Preference number: 5 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVLSSRG*AKARIT
Trigger: GGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAA...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp GAGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATGCTGACACTGCTTCCTaGCGCACCAGTCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: ETQDPRSFFKRKCLTHTYADTAS*RTSLFL
Trigger: CAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGC...ATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: RNLYSSAGRQHLPALVLRSGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...CCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTGTCAGCGGGGCCCTCTaGCTGACCCACGACGAAGTC +
Preference number: 5 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSVSGAL*LTHDEV
Trigger: GACTTCGTCGTGGGTCAGCAAGAGGGCCCCGCTGAC...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCGCCATTCAGAGGCCTTaGATCTTTGTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: NLYSSAGRQHLPALVLRAAIQRP*IFVFIA
Trigger: AGCTATGAAGACAAAGATCAAAGGCCTCTGAATGGC...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTGCCATTCAGAGGCCTTaGATCTTTGTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLAIQRP*IFVFIA
Trigger: AGCTATGAAGACAAAGATCAAAGGCCTCTGAATGGC...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGATTCCCTCTGTTCACTaGCCAGAGATGCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVIPSVH*PEMLQQ
Trigger: CTGCTGCAGCATCTCTGGCAAGTGAACAGAGGGAAT...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGAAGCTCCCGCATGAGTaGGTTCAGCTGAGGGATTTC +
Preference number: 5 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVKLPHE*VQLRDF
Trigger: GAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTT...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTAGTCCTGCAAAGCACTaGGCAGCAGCGGTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: RPRTLDLSSNASVSHTLISPAKH*AAAVEE
Trigger: TTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGACT...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCACTGAGGTTCAGAAACTaGGTGACGAGGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: KEIFILQQVDNICQPWSSLRFRN*VTRVST
Trigger: CGTGGACACCCTCGTCACCAAGTTTCTGAACCTCAG...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCCGCACCAGTCTCTTCTaGTCATCCAGGGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLRTSLF*SSRGLA
Trigger: AGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCG...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTCGCACCAGTCTCTTCTaGTCATCCAGGGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIRTSLF*SSRGLA
Trigger: AGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCG...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS CCA 90 bp ATTATCTTAGGGAATGTGGCCAAGCAAAGGAGAGATGTGTATATGTaGGGACCTTCTTTCAGACTCCTCACCTTGGGGAGCAGCATGGAA +
Preference number: 5 (lower is better)
Translates to: IILGNVAKQRRDVYM*GPSFRLLTLGSSME
Trigger: TTCCATGCTGCTCCCCAAGGTGAGGAGTCTGAAAGAAGGTCCCCACATATACACATCTCTCCTTTGCTTGGCCACATTCCCTAAGATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485400.1
CDS-3UTR CAA 90 bp TTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGGCCATTCAGAGGCCTTaGATCTTTGTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: FVQPCNRGLAFVLCLWERAIQRP*IFVFIA
Trigger: AGCTATGAAGACAAAGATCAAAGGCCTCTGAATGGC...CCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAAAGGCAAATAACGTCACTGGATaGTGCAACCATATTCCCTCT +
Preference number: 5 (lower is better)
Translates to: CTAMQQRPSICAVSVGKANNVTG*CNHIPS
Trigger: AGAGGGAATATGGTTGCACAATCCAGTGACGTTATT...TGCCTTTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGGCCAATAACGTCACTGGATaGTGCAACCATATTCCCTCT +
Preference number: 5 (lower is better)
Translates to: NLYSSAGRQHLPALVLRANNVTG*CNHIPS
Trigger: AGAGGGAATATGGTTGCACAATCCAGTGACGTTATT...GGCCCTGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CATTTGTGCTGTGTCTGTGGGAAAGGCAGTCAGAGACCAGTGGTTTCCCTGCTTAATAACGTCACTGGATaGTGCAACCATATTCCCTCT +
Preference number: 5 (lower is better)
Translates to: HLCCVCGKGSQRPVVSLLNNVTG*CNHIPS
Trigger: AGAGGGAATATGGTTGCACAATCCAGTGACGTTATT...AAGCAGGGAAACCACTGGTCTCTGACTGCCTTTCCCACAGACACAGCACAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGCCCTGCAGGGTGCTaGTTGAGGAGTCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSICPAGC*LRSPAK
Trigger: CTTTGCAGGACTCCTCAACAAGCACCCTGCAGGGCA...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTGCTGACACTGCTTCCTaGCGCACCAGTCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TQDPRSFFKRKCLTHTYFADTAS*RTSLFL
Trigger: CAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGC...AAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: KEIFILQQVDNICQPWSSSGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp ACCTGGATGAAGCCAAAGGTGAAGTCAGCTCCTAGGCTCTTTAGCTCTTCTTCCGGACTCTTATGTTCTTaGTACAGCCATGCAACAGAG +
Preference number: 5 (lower is better)
Translates to: TWMKPKVKSAPRLFSSSSGLLCS*YSHATE
Trigger: CTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCC...GGAAGAAGAGCTAAAGAGCCTAGGAGCTGACTTCACCTTTGGCTTCATCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp GGACAGATGGGATCACAAGATGATGGTCCTTCAGCCGGTTCTCATAGAACAGTACAGTCCTGTAGAATGTaGCTAAGGAAGGAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GQMGSQDDGPSAGSHRTVQSCRM*LRKESR
Trigger: CCTTGACTCCTTCCTTAGCAACATTCTACAGGACTG...TACTGTTCTATGAGAACCGGCTGAAGGACCATCATCTTGTGATCCCATCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp TTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGGAATGTAGAGAATCCAACTaGGCACTCAGAACCTCAGAA +
Preference number: 5 (lower is better)
Translates to: FFVQPCNRGLAFVLCLWECRESN*ALRTSE
Trigger: TTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTACA...TTCCCACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTCAGATGCCGGGAGCATaGGGTGGGCTCATCTCCGTT +
Preference number: 5 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSQMPGA*GGLISV
Trigger: AACGGAGATGAGCCCACCCAATGCTCCCGGCATCTG...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGGGATTTCCACATTTCGAGGCAGGGAGCAGACAAAGGCCATAAGCAGTGCAATAATAACGTCACTGGATaGTGCAACCATATTCCCTCT +
Preference number: 5 (lower is better)
Translates to: RDFHISRQGADKGHKQCNNNVTG*CNHIPS
Trigger: AGAGGGAATATGGTTGCACAATCCAGTGACGTTATT...ATTGCACTGCTTATGGCCTTTGTCTGCTCCCTGCCTCGAAATGTGGAAATCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTGCAGGGTGCTTGTaGAGGAGTCCTGCAAAGCAC +
Preference number: 5 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRPAGCL*RSPAKH
Trigger: GTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAGG...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGAGGCCAGCCTCCACTTaGTCCACAGCTAGCTGTAGG +
Preference number: 5 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRRPAST*STASCR
Trigger: CCTACAGCTAGCTGTGGACAAAGTGGAGGCTGGCCT...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AAAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCGACCCTTCAAGTAGTTaGGCTTCACATCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: KRNLYSSAGRQHLPALVLDPSSS*ASHLGE
Trigger: CTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGTC...GAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGACCCTTCAAGTAGTTaGGCTTCACATCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: KEIFILQQVDNICQPWSSDPSSS*ASHLGE
Trigger: CTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGTC...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTTGTCATCCAGGGGTTaGGCTAAGGCCCGAATCACC +
Preference number: 5 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSILSSRG*AKARIT
Trigger: GGTGATTCGGGCCTTAGCCAAACCCCTGGATGACAA...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTGGAGCATTTCAAGGATaGTCCGCCGCTGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSGAFQG*SAAGCS
Trigger: AGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCC...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp TATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTTGTGCTGTGTCTGTGGCCATTCAGAGGCCTTaGATCTTTGTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: YVLCTAMQQRPSICAVSVAIQRP*IFVFIA
Trigger: AGCTATGAAGACAAAGATCAAAGGCCTCTGAATGGC...CACAGACACAGCACAAATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CAAGATGATGGTCCTTCAGCCGGTTCTCATAGAACAGTATCAGGTGTACCACTTGCCATTCAGAGGCCTTaGATCTTTGTCTTCATAGCT +
Preference number: 5 (lower is better)
Translates to: QDDGPSAGSHRTVSGVPLAIQRP*IFVFIA
Trigger: AGCTATGAAGACAAAGATCAAAGGCCTCTGAATGGC...AAGTGGTACACCTGATACTGTTCTATGAGAACCGGCTGAAGGACCATCATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415383.5
CDS-3UTR CAA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCGCACCAGTCTCTTCTaGTCATCCAGGGGTTTGGCT +
Preference number: 5 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRRTSLF*SSRGLA
Trigger: AGCCAAACCCCTGGATGACAAGAAGAGACTGGTGCG...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTAGTAAAGGCAGTACATaGCTGGTGACAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: RPRTLDLSSNASVSHTLISKGST*LVTESQ
Trigger: CTGTGACTCTGTCACCAGCAATGTACTGCCTTTACT...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS CCA 90 bp TTTAAAACACTGGCTCAAACAAACTCTACCCTTTCTTTACTTCACTaGGAGGGAGCAGACCCCCTCTTTCCCTTTATCATTCTCTCTCAG +
Preference number: 5 (lower is better)
Translates to: FKTLAQTNSTLSLLH*EGADPLFPFIILSQ
Trigger: CTGAGAGAGAATGATAAAGGGAAAGAGGGGGTCTGCTCCCTCCCAGTGAAGTAAAGAAAGGGTAGAGTTTGTTTGAGCCAGTGTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477575.1
CDS-3UTR CAA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGTGACAAAAGCTGGATaGCTCGTGCCCGAGTTCGGG +
Preference number: 5 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMVTKAG*LVPEFG
Trigger: CCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCAC...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTGTAGAGAATCCAACTaGGCACTCAGAACCTCAGAA +
Preference number: 5 (lower is better)
Translates to: RPRTLDLSSNASVSHTLICRESN*ALRTSE
Trigger: TTCTGAGGTTCTGAGTGCCAAGTTGGATTCTCTACA...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTGAGCACAGCTGGTCCTaGAAGCCATTCAGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSEHSWS*KPFRGL
Trigger: AAGGCCTCTGAATGGCTTCAAGGACCAGCTGTGCTC...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTAGTCCTGCAAAGCACTaGGCAGCAGCGGTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSSPAKH*AAAVEE
Trigger: TTCTTCCACCGCTGCTGCCAAGTGCTTTGCAGGACT...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTATGCCCTGCAGGGTGCTaGTTGAGGAGTCCTGCAAAG +
Preference number: 5 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLCPAGC*LRSPAK
Trigger: CTTTGCAGGACTCCTCAACAAGCACCCTGCAGGGCA...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AAAGAAATCTTTATTCTTCAGCAGGTAGACAACATCTGCCAGCCCTGGTCCTCAGGACTCTTATGTTCTTaGTACAGCCATGCAACAGAG +
Preference number: 5 (lower is better)
Translates to: KEIFILQQVDNICQPWSSGLLCS*YSHATE
Trigger: CTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCC...TGAGGACCAGGGCTGGCAGATGTTGTCTACCTGCTGAAGAATAAAGATTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGACCCAGGACCCTAGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTGGACTCTTATGTTCTTaGTACAGCCATGCAACAGAG +
Preference number: 5 (lower is better)
Translates to: RPRTLDLSSNASVSHTLIGLLCS*YSHATE
Trigger: CTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCC...AATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCTAGGGTCCTGGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGTTTGGCTTCACATCTaGGGGAGCAGCATGGAAGCC +
Preference number: 5 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMVWLHI*GSSMEA
Trigger: GGCTTCCATGCTGCTCCCCAAGATGTGAAGCCAAAC...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTAGTGGTTTCCCTGCTTaGGGGAAGATGGCTCAACAG +
Preference number: 5 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSSGFPA*GKMAQQ
Trigger: CTGTTGAGCCATCTTCCCCAAAGCAGGGAAACCACT...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTCAGTCCTGTAGAATGTaGCTAAGGAAGGAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSIQSCRM*LRKESR
Trigger: CCTTGACTCCTTCCTTAGCAACATTCTACAGGACTG...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGCCTAGCATTAGTAAAGGCAGTACATaGCTGGTGACAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: RNMDSYVLCTAMQQRPSISKGST*LVTESQ
Trigger: CTGTGACTCTGTCACCAGCAATGTACTGCCTTTACT...AATGCTAGGCCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS TCA 90 bp TTCTCTTCAGGGCTGACCCTTTTTCCATTCCAAGAAAGTACTCAGTaGAGAGATGTGCAACAATATACACATTGCTGTGGAGGCAAGAAT +
Preference number: 5 (lower is better)
Translates to: FSSGLTLFPFQESTQ*RDVQQYTHCCGGKN
Trigger: ATTCTTGCCTCCACAGCAATGTGTATATTGTTGCACATCTCTTCACTGAGTACTTTCTTGGAATGGAAAAAGGGTCAGCCCTGAAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477575.1
CDS CCA 90 bp GTGCAACAATATACACATTGCTGTGGAGGCAAGAATTTAAAACACTaGCTCAAACAAACTCTACCCTTTCTTTACTTCACTGGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: VQQYTHCCGGKNLKH*LKQTLPFLYFTGRE
Trigger: CTCCCTCCCAGTGAAGTAAAGAAAGGGTAGAGTTTGTTTGAGCCAGTGTTTTAAATTCTTGCCTCCACAGCAATGTGTATATTGTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477575.1
CDS-3UTR CAA 90 bp AGATCTTTCTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAAGAGGCAGTGTCTCCTaGACGATGCTGGGATGTGTT +
Preference number: 5 (lower is better)
Translates to: RSFFKRKCLTHTYFTNPLRGSVS*TMLGCV
Trigger: AACACATCCCAGCATCGTCAAGGAGACACTGCCTCT...TAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAGAAAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTGACCCTTCAAGTAGTTaGGCTTCACATCTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSDPSSS*ASHLGE
Trigger: CTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGTC...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp CTTCAAACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGGCAAGAGTACAGGCTaGGGCAGCCTGTTAAGTACA +
Preference number: 5 (lower is better)
Translates to: LQTQVSHTHLFYKSTRNMGKSTG*GSLLST
Trigger: TGTACTTAACAGGCTGCCCAAGCCTGTACTCTTGCC...CATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS-3UTR CAA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGAGTAAAGGCAGTACATaGCTGGTGACAGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRSKGST*LVTESQ
Trigger: CTGTGACTCTGTCACCAGCAATGTACTGCCTTTACT...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000438925.7
CDS-3UTR CAA 90 bp AAATCCACTAGAAATATGGACTCTTATGTTCTTTGTACAGCCATGCAACAGAGGAATAACGTCACTGGATaGTGCAACCATATTCCCTCT +
Preference number: 5 (lower is better)
Translates to: KSTRNMDSYVLCTAMQQRNNVTG*CNHIPS
Trigger: AGAGGGAATATGGTTGCACAATCCAGTGACGTTATT...CCTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCCATATTTCTAGTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
CDS-3UTR CAA 90 bp ACGCAAGTGTCTCACACACACTTATTTTACAAATCCACTAGAAATATGGACTCTGGACTCTTATGTTCTTaGTACAGCCATGCAACAGAG +
Preference number: 5 (lower is better)
Translates to: TQVSHTHLFYKSTRNMDSGLLCS*YSHATE
Trigger: CTCTGTTGCATGGCTGTACAAAGAACATAAGAGTCC...AGAGTCCATATTTCTAGTGGATTTGTAAAATAAGTGTGTGTGAGACACTTGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000434538.5
ENST00000438925.7
ENST00000444411.5
CDS CCA 90 bp AGAAAGTACTCAGTGAAGAGATGTGCAACAATATACACATTGCTGTaGAGGCAAGAATTTAAAACACTGGCTCAAACAAACTCTACCCTT +
Preference number: 5 (lower is better)
Translates to: RKYSVKRCATIYTLL*RQEFKTLAQTNSTL
Trigger: AAGGGTAGAGTTTGTTTGAGCCAGTGTTTTAAATTCTTGCCTCCACAGCAATGTGTATATTGTTGCACATCTCTTCACTGAGTACTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477575.1
CDS GCA 72 bp GATATGGGCGGTGGCTCGAGACGGGCTCTCCGCGCATaGGCCTCCCGAGCCAATCTCCGGGGAAGCGCAAGG +
Preference number: 6 (lower is better)
Translates to: DMGGGSRRALRA*ASRANLRGSAR
Trigger: CCTTGCGCTTCCCCGGAGATTGGCTCGGGAGGCGCATGCGCGGAGAGCCCGTCTCGAGCCACCGCCCATATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS CCA 72 bp ACGCGAACTAGAGACCGTGGGAGGGGATATGGGCGGTaGCTCGAGACGGGCTCTCCGCGCATGCGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: TRTRDRGRGYGR*LETGSPRMRLP
Trigger: CGGGAGGCGCATGCGCGGAGAGCCCGTCTCGAGCCACCGCCCATATCCCCTCCCACGGTCTCTAGTTCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355839.10
CDS GCA 72 bp ACAGGGGTGGGCAGGCGAGTGAGAGCATGCATGCACTaGAGTGCGGCGATCCGGACAGCCGTGGGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: TGVGRRVRACMH*SAAIRTAVGSS
Trigger: AGAGCTGCCCACGGCTGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCTCACTCGCCTGCCCACCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444411.5
CDS CCA 72 bp CTAGCTGGTATCTGTGGCAGGCGGAGTTCCCTCTCTTaGCTTTGGAGCCCCGCTCTGTCTCTGTACAGGGGA +
Preference number: 6 (lower is better)
Translates to: LAGICGRRSSLS*LWSPALSLYRG
Trigger: TCCCCTGTACAGAGACAGAGCGGGGCTCCAAAGCCAAGAGAGGGAACTCCGCCTGCCACAGATACCAGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422685.5
CDS CAA 72 bp ACTAGCTGGTATCTGTGGCAGGCGGAGTTCCCTCTCTaGGCTTTGGAGCCCCGCTCTGTCTCTGTACAGGGG +
Preference number: 6 (lower is better)
Translates to: TSWYLWQAEFPL*ALEPRSVSVQG
Trigger: CCCCTGTACAGAGACAGAGCGGGGCTCCAAAGCCAAGAGAGGGAACTCCGCCTGCCACAGATACCAGCTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422685.5
CDS CAA 90 bp ACCACTAGCTGGTATCTGTGGCAGGCGGAGTTCCCTCTCTTGGCTTaGGAGCCCCGCTCTGTCTCTGTACAGGGGAGCTTCTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: TTSWYLWQAEFPLLA*EPRSVSVQGSFFLL
Trigger: GAGGAGGAAGAAGCTCCCCTGTACAGAGACAGAGCGGGGCTCCAAAGCCAAGAGAGGGAACTCCGCCTGCCACAGATACCAGCTAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422685.5
CDS CAA 90 bp AGGTGTACCACTAGCTGGTATCTGTGGCAGGCGGAGTTCCCTCTCTaGGCTTTGGAGCCCCGCTCTGTCTCTGTACAGGGGAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RCTTSWYLWQAEFPL*ALEPRSVSVQGSFF
Trigger: GAAGAAGCTCCCCTGTACAGAGACAGAGCGGGGCTCCAAAGCCAAGAGAGGGAACTCCGCCTGCCACAGATACCAGCTAGTGGTACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422685.5
CDS CCA 72 bp AGAAGCTCTGCCTGTGGGACTTACCGTGGGCAGCTCTaGCAAGAGTACAGGCTTGGGCAGCCTGTTAAGTAC +
Preference number: 6 (lower is better)
Translates to: RSSACGTYRGQL*QEYRLGQPVKY
Trigger: GTACTTAACAGGCTGCCCAAGCCTGTACTCTTGCCAGAGCTGCCCACGGTAAGTCCCACAGGCAGAGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485400.1
CDS CAA 90 bp GGAGCAAGGTGTGACAGTGGAGTAGCACCTGTGACAAAAGCTGGATaGCTCGTGCCCGAGTTCGGGGTTCTGGATTCTCTAGAGAGGACC +
Preference number: 6 (lower is better)
Translates to: GARCDSGVAPVTKAG*LVPEFGVLDSLERT
Trigger: GGTCCTCTCTAGAGAATCCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCACAGGTGCTACTCCACTGTCACACCTTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000422685.5
ENST00000437002.5
ENST00000438925.7
ENST00000439048.1
ENST00000441194.5
ENST00000448660.5
ENST00000477575.1
ENST00000483626.5
CDS CCA 72 bp TCAGACTCCTCACCTTGGGGAGCAGCATGGAAGCCCTaGACCAAAGCAGGCACATTATCTGTGAAGAACCGC +
Preference number: 6 (lower is better)
Translates to: SDSSPWGAAWKP*TKAGTLSVKNR
Trigger: GCGGTTCTTCACAGATAATGTGCCTGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGGTGAGGAGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485400.1
CDS CAA 72 bp GTGTATATGTGGGGACCTTCTTTCAGACTCCTCACCTaGGGGAGCAGCATGGAAGCCCTGGACCAAAGCAGG +
Preference number: 6 (lower is better)
Translates to: VYMWGPSFRLLT*GSSMEALDQSR
Trigger: CCTGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGGTGAGGAGTCTGAAAGAAGGTCCCCACATATACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485400.1
CDS TCA 72 bp AGCTGTGGCAGCAGCTCAGTTCCAAAAGCTCCCGCATaGGTTGGTTCAGCTGAGGGATTTCCACCTACAGAA +
Preference number: 6 (lower is better)
Translates to: SCGSSSVPKAPA*VGSAEGFPPTE
Trigger: TTCTGTAGGTGGAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGGAACTGAGCTGCTGCCACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495415.5
CDS GCA 72 bp AACCCAGGAGCATTTCAAGGATTGTCCGCCGCTGGCTaGTCTGTAACGTTTCAAGGGGTACTGACTGTGCTT +
Preference number: 6 (lower is better)
Translates to: NPGAFQGLSAAG*SVTFQGVLTVL
Trigger: AAGCACAGTCAGTACCCCTTGAAACGTTACAGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCCTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS CCA 72 bp GGGAATGTGGCCAAGCAAAGGAGAGATGTGTATATGTaGGGACCTTCTTTCAGACTCCTCACCTTGGGGAGC +
Preference number: 6 (lower is better)
Translates to: GNVAKQRRDVYM*GPSFRLLTLGS
Trigger: GCTCCCCAAGGTGAGGAGTCTGAAAGAAGGTCCCCACATATACACATCTCTCCTTTGCTTGGCCACATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485400.1
CDS CCA 72 bp GGAAAGAAGCTAAGGGGCAATGGGCAAGGTAGGGGATaGCCACATCATGAAGATCCTGGTTCTTGTTCCCTC +
Preference number: 6 (lower is better)
Translates to: GKKLRGNGQGRG*PHHEDPGSCSL
Trigger: GAGGGAACAAGAACCAGGATCTTCATGATGTGGCCATCCCCTACCTTGCCCATTGCCCCTTAGCTTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485400.1
CDS CAA 72 bp TGTGACAGTGGAGTAGCACCTGTGACAAAAGCTGGATaGCTCGTGCCCGAGTTCGGGGTTCTGGATTCTCTA +
Preference number: 6 (lower is better)
Translates to: CDSGVAPVTKAG*LVPEFGVLDSL
Trigger: TAGAGAATCCAGAACCCCGAACTCGGGCACGAGCAATCCAGCTTTTGTCACAGGTGCTACTCCACTGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000327238.14
ENST00000355839.10
ENST00000370782.6
ENST00000415383.5
ENST00000422685.5
ENST00000437002.5
ENST00000438925.7
ENST00000439048.1
ENST00000441194.5
ENST00000448660.5
ENST00000477575.1
ENST00000483626.5
CDS CAA 72 bp GTGGCAGCAGCTCAGTTCCAAAAGCTCCCGCATGAGTaGGTTCAGCTGAGGGATTTCCACCTACAGAAAACC +
Preference number: 6 (lower is better)
Translates to: VAAAQFQKLPHE*VQLRDFHLQKT
Trigger: GGTTTTCTGTAGGTGGAAATCCCTCAGCTGAACCAACTCATGCGGGAGCTTTTGGAACTGAGCTGCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495415.5
CDS CAA 90 bp AGGAGAGATGTGTATATGTGGGGACCTTCTTTCAGACTCCTCACCTaGGGGAGCAGCATGGAAGCCCTGGACCAAAGCAGGCACATTATC +
Preference number: 6 (lower is better)
Translates to: RRDVYMWGPSFRLLT*GSSMEALDQSRHII
Trigger: GATAATGTGCCTGCTTTGGTCCAGGGCTTCCATGCTGCTCCCCAAGGTGAGGAGTCTGAAAGAAGGTCCCCACATATACACATCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485400.1
CDS CAA 90 bp TCCATTTCTGCTGCAGCTTCAAGAAACCCAGGAGCATTTCAAGGATaGTCCGCCGCTGGCTGCTCTGTAACGTTTCAAGGGGTACTGACT +
Preference number: 6 (lower is better)
Translates to: SISAAASRNPGAFQG*SAAGCSVTFQGVLT
Trigger: AGTCAGTACCCCTTGAAACGTTACAGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCCTGGGTTTCTTGAAGCTGCAGCAGAAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS TCA 72 bp GTGACACCAGTACCTTCCTTCTCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGTGACAAAAGCTGGATT +
Preference number: 6 (lower is better)
Translates to: VTPVPSFSRSKV*QWSSTCDKSWI
Trigger: AATCCAGCTTTTGTCACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGAGAAGGAAGGTACTGGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448660.5
CDS TCA 72 bp GAACCAGTACATAGTGGCAGCAGGGACCGGGACGGATaGGAACTAACTTCTCTGGTGGGGGAAGTAAAAGAT +
Preference number: 6 (lower is better)
Translates to: EPVHSGSRDRDG*ELTSLVGEVKD
Trigger: ATCTTTTACTTCCCCCACCAGAGAAGTTAGTTCTCATCCGTCCCGGTCCCTGCTGCCACTATGTACTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478452.1
ENST00000495415.5
CDS CCA 72 bp AAGAAACCCAGGAGCATTTCAAGGATTGTCCGCCGCTaGCTGCTCTGTAACGTTTCAAGGGGTACTGACTGT +
Preference number: 6 (lower is better)
Translates to: KKPRSISRIVRR*LLCNVSRGTDC
Trigger: ACAGTCAGTACCCCTTGAAACGTTACAGAGCAGCCAGCGGCGGACAATCCTTGAAATGCTCCTGGGTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434392.5
CDS TCA 72 bp AAACTCTCTGCTCCTTCCTTCTCCAGGAGCAAGGTGTaGCAGTGGAGTAGCACCTGTGACAAAAGCTGGATT +
Preference number: 6 (lower is better)
Translates to: KLSAPSFSRSKV*QWSSTCDKSWI
Trigger: AATCCAGCTTTTGTCACAGGTGCTACTCCACTGTCACACCTTGCTCCTGGAGAAGGAAGGAGCAGAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422685.5
CDS GCA 72 bp TTGTGCTCCCTTCTCTTCTTAGGTACTATAAAGCTCTaGCCAACTGTGGTCTTGACGCTTTTCCCACGGGCA +
Preference number: 6 (lower is better)
Translates to: LCSLLFLGTIKL*PTVVLTLFPRA
Trigger: TGCCCGTGGGAAAAGCGTCAAGACCACAGTTGGGCAGAGCTTTATAGTACCTAAGAAGAGAAGGGAGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480108.1
CDS CCA 72 bp TCTCTGGTGGGGGAAGTAAAAGATCAGCTTAGCCTGTaGCAAATTTCAGCCCGGAGTCACCTTGTCAAGGTT +
Preference number: 6 (lower is better)
Translates to: SLVGEVKDQLSL*QISARSHLVKV
Trigger: AACCTTGACAAGGTGACTCCGGGCTGAAATTTGCCACAGGCTAAGCTGATCTTTTACTTCCCCCACCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478452.1
ENST00000495415.5
CDS CCA 72 bp TTGGTTCAGCTGAGGGATTTCCACCTACAGAAAACCTaGCCATGTAATGGACCCAGAGAACACTTGAACTCC +
Preference number: 6 (lower is better)
Translates to: LVQLRDFHLQKT*PCNGPREHLNS
Trigger: GGAGTTCAAGTGTTCTCTGGGTCCATTACATGGCCAGGTTTTCTGTAGGTGGAAATCCCTCAGCTGAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478452.1
ENST00000495415.5
CDS TCA 72 bp CACAATCACAAGACCATGACGGGTTCAAGAAATGAATaGTTGGGTTCTGTCAGCATCACTGACTCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: HNHKTMTGSRNE*LGSVSITDSGA
Trigger: AGCCCCAGAGTCAGTGATGCTGACAGAACCCAATCATTCATTTCTTGAACCCGTCATGGTCTTGTGATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478452.1
CDS GCA 72 bp ACTGTAGGGAGTAGGACGGCAGAACTAGACTCTTTGTaGTCCCTTCTCTTCTTAGGTACTATAAAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: TVGSRTAELDSL*SLLFLGTIKLC
Trigger: GCAGAGCTTTATAGTACCTAAGAAGAGAAGGGAGCACAAAGAGTCTAGTTCTGCCGTCCTACTCCCTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480108.1
CDS CCA 72 bp CTGGCTCAAACAAACTCTACCCTTTCTTTACTTCACTaGGAGGGAGCAGACCCCCTCTTTCCCTTTATCATT +
Preference number: 6 (lower is better)
Translates to: LAQTNSTLSLLH*EGADPLFPFII
Trigger: AATGATAAAGGGAAAGAGGGGGTCTGCTCCCTCCCAGTGAAGTAAAGAAAGGGTAGAGTTTGTTTGAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477575.1
CDS TCA 72 bp GCAAAACACACACACATGCACACAATCACAAGACCATaGCGGGTTCAAGAAATGAATGATTGGGTTCTGTCA +
Preference number: 6 (lower is better)
Translates to: AKHTHMHTITRP*RVQEMNDWVLS
Trigger: TGACAGAACCCAATCATTCATTTCTTGAACCCGTCATGGTCTTGTGATTGTGTGCATGTGTGTGTGTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478452.1
CDS CAA 72 bp CCTACTAATAGGGGAAAAAGTAGGATGTGCTTGCTTTaGACATTTCCCAGAAAGCTCTGTCTCTTACCTTCT +
Preference number: 6 (lower is better)
Translates to: PTNRGKSRMCLL*TFPRKLCLLPS
Trigger: AGAAGGTAAGAGACAGAGCTTTCTGGGAAATGTCAAAAGCAAGCACATCCTACTTTTTCCCCTATTAGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477575.1
CDS CAA 72 bp GAGCCTGGTATTCTCATAATACAGAGGTGCTGCCATTaGAAAAGAGAGGGTCATCTACTTCCAATAAAGAAT +
Preference number: 6 (lower is better)
Translates to: EPGILIIQRCCH*KREGHLLPIKN
Trigger: ATTCTTTATTGGAAGTAGATGACCCTCTCTTTTCAAATGGCAGCACCTCTGTATTATGAGAATACCAGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480108.1
CDS CCA 72 bp TCAGTGAAGAGATGTGCAACAATATACACATTGCTGTaGAGGCAAGAATTTAAAACACTGGCTCAAACAAAC +
Preference number: 6 (lower is better)
Translates to: SVKRCATIYTLL*RQEFKTLAQTN
Trigger: GTTTGTTTGAGCCAGTGTTTTAAATTCTTGCCTCCACAGCAATGTGTATATTGTTGCACATCTCTTCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477575.1
CDS CAA 72 bp AAGTACTCAGTGAAGAGATGTGCAACAATATACACATaGCTGTGGAGGCAAGAATTTAAAACACTGGCTCAA +
Preference number: 6 (lower is better)
Translates to: KYSVKRCATIYT*LWRQEFKTLAQ
Trigger: TTGAGCCAGTGTTTTAAATTCTTGCCTCCACAGCAATGTGTATATTGTTGCACATCTCTTCACTGAGTACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477575.1
CDS CAA 90 bp ATTCCAAGAAAGTACTCAGTGAAGAGATGTGCAACAATATACACATaGCTGTGGAGGCAAGAATTTAAAACACTGGCTCAAACAAACTCT +
Preference number: 6 (lower is better)
Translates to: IPRKYSVKRCATIYT*LWRQEFKTLAQTNS
Trigger: AGAGTTTGTTTGAGCCAGTGTTTTAAATTCTTGCCTCCACAGCAATGTGTATATTGTTGCACATCTCTTCACTGAGTACTTTCTTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477575.1