RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMRN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000173269

Ensembl transcript IDs: ENST00000372027.10, ENST00000474994.2, ENST00000488950.1, ENST00000608090.1, ENST00000608753.1, ENST00000609457.5, ENST00000610081.5

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAATACAGGGTGTGGTGAAGAGTTGGAGCCCAGGCCGTGCTGTCTaGGAAGGCATGCCAAGCCAAGGTTCAGGCTTCCTAGGACCATGT +
Preference number: 1 (lower is better)
Translates to: RIQGVVKSWSPGRAV*EGMPSQGSGFLGPC
Trigger: ACATGGTCCTAGGAAGCCTGAACCTTGGCTTGGCATGCCTTCTCAGACAGCACGGCCTGGGCTCCAACTCTTCACCACACCCTGTATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR GCA 90 bp AGAAGGCATGCCAAGCCAAGGTTCAGGCTTCCTAGGACCATGTCCTaGCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCC +
Preference number: 1 (lower is better)
Translates to: RRHAKPRFRLPRTMS*PEKHSSPSHHGEMA
Trigger: GGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTGGCTTGGCATGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR CCA 90 bp TCACTGTTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATaGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: SLFHMAGEASGNLQS*QTVKRNQGIFTRWQ
Trigger: CTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAACAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR GCA 90 bp GGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGGGCCCCCCTGCGGACACGGCTaGTGCGAGTGGATGAGGAAT +
Preference number: 2 (lower is better)
Translates to: GSAGSGIAMESWCSQLGPPCGHG*CEWMRN
Trigger: ATTCCTCATCCACTCGCAGCAGCCGTGTCCGCAGGG...GGGCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000608090.1
3UTR-3UTR CCA 90 bp GGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGTACATGACTTTCTGGCAGTCTaGAGCTCCCTGCGGACACGG +
Preference number: 2 (lower is better)
Translates to: GQHLLLDLVHWLVGHAVHDFLAV*SSLRTR
Trigger: CCGTGTCCGCAGGGAGCTCCAGACTGCCAGAAAGTC...ATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
3UTR-3UTR CCA 90 bp GCTGTCACCAGGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCACTTGACCTGGTACACTaGCTTGTGGGCCATGCGGTA +
Preference number: 2 (lower is better)
Translates to: AVTRICRLRDCHGIVVLALDLVH*LVGHAV
Trigger: TACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAG...TGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
3UTR-3UTR TCA 90 bp GCTGTCACCAGGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCATCAGCACCTTCTGCTTaGCCTGGTACACTGGCTTGT +
Preference number: 2 (lower is better)
Translates to: AVTRICRLRDCHGIVVLASAPSA*PGTLAC
Trigger: ACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGA...TGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
3UTR-3UTR GCA 90 bp AAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGTGCGGACACGGCTGCTaGGAGTGGATGAGGAATTTC +
Preference number: 2 (lower is better)
Translates to: KEVSTFCLTWYTGLWAMRCGHGC*EWMRNF
Trigger: GAAATTCCTCATCCACTCGCAGCAGCCGTGTCCGCA...CCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
3UTR-3UTR CCA 90 bp GCTGTCACCAGGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCATGGTACACTGGCTTGTaGGCCATGCGGTACATGACT +
Preference number: 2 (lower is better)
Translates to: AVTRICRLRDCHGIVVLAWYTGL*AMRYMT
Trigger: AGTCATGTACCGCATGGCCCACAAGCCAGTGTACCA...TGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
3UTR-3UTR TCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGCGAGTCCATGATGTCTaGTCAGATTGGGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKRVHDV*SDWGWG
Trigger: ACCCCAGCCCCAATCTGATCAGACATCATGGACTCG...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR CCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAACAGTCCTTCTCATCATaGAGAAATGGCCAAGCCCCA +
Preference number: 2 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEQSFSS*RNGQAP
Trigger: TGGGGCTTGGCCATTTCTCCATGATGAGAAGGACTG...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGTTCCTTTCCCTTGGTTaGCCAGGCTGTCGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKFLSLG*PGCRLH
Trigger: ATGAAGACGACAGCCTGGCCAACCAAGGGAAAGGAA...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR GCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGACACCACACCATCTTTaGAGAAGGTTTCCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: RGTKASSQGGRKENEHRRTPHHL*RRFPGK
Trigger: CTTCCCTGGAAACCTTCTGCAAAGATGGTGTGGTGT...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR TCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATAGACAGACCAACTGAATaGCCTCCAGCCCATCCTTGG +
Preference number: 2 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLIDRPTE*PPAHPW
Trigger: CCAAGGATGGGCTGGAGGTCATTCAGTTGGTCTGTC...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR TCA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGCCAGGCCGTGCTGTCTaGGAAGGCATGCCAAGCCAA +
Preference number: 2 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKPGRAV*EGMPSQ
Trigger: TTGGCTTGGCATGCCTTCTCAGACAGCACGGCCTGG...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR GCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATACCTAGGACCATGTCCTaGCCGGAGAAGCATTCCAGT +
Preference number: 2 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLIPRTMS*PEKHSS
Trigger: ACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGG...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR CCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATATGGCCAAGCCCCATGTaGTTACAGGGAAGCCACGTA +
Preference number: 2 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLIWPSPM*LQGSHV
Trigger: TACGTGGCTTCCCTGTAACCACATGGGGCTTGGCCA...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR TCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCAGCTGGGCGAGTCCATaGTGTCTGATCAGATTGGGG +
Preference number: 2 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTSWASP*CLIRLG
Trigger: CCCCAATCTGATCAGACATCATGGACTCGCCCAGCT...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR TCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGAAGAGACAGACCAACTaGATGACCTCCAGCCCATCC +
Preference number: 2 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVKRQTN*MTSSPS
Trigger: GGATGGGCTGGAGGTCATTCAGTTGGTCTGTCTCTT...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR TCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATAGATTACAATTCAAGATaGTATTTTAGGTGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLIDYNSR*YFRWGH
Trigger: GTGCCCCCACCTAAAATATCATCTTGAATTGTAATC...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR TCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATAAATCATCAGATCTCGTaGGAACTATCACAAGAACAG +
Preference number: 2 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLINHQIS*ELSQEQ
Trigger: CTGTTCTTGTGATAGTTCTCACGAGATCTGATGATT...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR CCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGCTCATCATGGAGAAATaGCCAAGCCCCATGTGGTTA +
Preference number: 2 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVLIMEK*PSPMWL
Trigger: TAACCACATGGGGCTTGGCCATTTCTCCATGATGAG...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR CCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTTTAAACATTCCTCCTaGGGAAGAATGTCTTTCTAT +
Preference number: 2 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRFKHSS*GRMSFY
Trigger: ATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR CAA 90 bp CAGGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGGGCACCTGGTACACTGGCTaGTGGGCCATGCGGTACATG +
Preference number: 3 (lower is better)
Translates to: QDLQAQGLPWNRGARSWGTWYTG*WAMRYM
Trigger: CATGTACCGCATGGCCCACAAGCCAGTGTACCAGGT...GCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
3UTR GCA 72 bp GCCAAGCCAAGGTTCAGGCTTCCTAGGACCATGTCCTaGCCGGAGAAGCATTCCAGTCCTTCTCATCATGGA +
Preference number: 3 (lower is better)
Translates to: AKPRFRLPRTMS*PEKHSSPSHHG
Trigger: TCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTGGCTTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR CCA 72 bp GTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTaGGCCATGCGGTACATGACTTTGACTTTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: VSTFCLTWYTGL*AMRYMTLTFWQ
Trigger: CTGCCAGAAAGTCAAAGTCATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
3UTR CCA 72 bp CACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATaGCAGACAGTGAAGAGGAACCAAGGCATCTTCACA +
Preference number: 3 (lower is better)
Translates to: HMAGEASGNLQS*QTVKRNQGIFT
Trigger: TGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR CCA 72 bp CAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTaGCTTGTGGGCCATGCGGTACATGACTTTGACTTT +
Preference number: 3 (lower is better)
Translates to: QRGQHLLLDLVH*LVGHAVHDFDF
Trigger: AAAGTCAAAGTCATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
3UTR-3UTR CAA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATACACCACACCATCTTaGCAGAAGGTTTCCAGGGAA +
Preference number: 3 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEYTTPS*QKVSRE
Trigger: TTCCCTGGAAACCTTCTGCAAAGATGGTGTGGTGTA...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR CAA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGGGGTGTGGTGAAGAGTaGGAGCCCAGGCCGTGCTGT +
Preference number: 3 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVGCGEE*EPRPCC
Trigger: ACAGCACGGCCTGGGCTCCAACTCTTCACCACACCC...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR CAA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATATTTCCTTTCCCTTGGTaGGCCAGGCTGTCGTCTTCA +
Preference number: 3 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLIFPFPW*ARLSSS
Trigger: TGAAGACGACAGCCTGGCCAACCAAGGGAAAGGAAA...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR-3UTR CAA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATACTAATTTCCTTTCCCTaGGTTGGCCAGGCTGTCGTC +
Preference number: 3 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLILISFP*VGQAVV
Trigger: GACGACAGCCTGGCCAACCAAGGGAAAGGAAATTAG...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGCGTGAAGGGAGGCGTTaGGGGAGGCGGCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKREGRR*GRRPRP
Trigger: GGGCCGGGGCCGCCTCCCTCAACGCCTCCCTTCACG...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp CAAGGTTCAGGCTTCCTAGGACCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTGCGGCGAAGGCGCTGTaGAGCTGGCGCACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: QGSGFLGPCPARRSIPVLAAKAL*SWRTSW
Trigger: CCACGAGGTGCGCCAGCTGCACAGCGCCTTCGCCGC...AAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GCTGTCACCAGGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGCCATGGAATCGTGGTaGTCGCAGTTGGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: AVTRICRLRDCHGIVVLAAMESW*SQLGPV
Trigger: CACGGGCCCCAACTGCGAGCACCACGATTCCATGGC...TGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGGCCAGCACCGCCTCGTaGCGCAGCGCGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRASTAS*RSASSS
Trigger: GCTGGAGGACGCGCTGCGGCACGAGGCGGTGCTGGC...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGCCGAGCGCCTGCTCCTaGAGCCCGCTAGCGGCGTCC +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKPSACS*SPLAAS
Trigger: GGACGCCGCTAGCGGGCTGCAGGAGCAGGCGCTCGG...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAAGGGGGCTCCGAGGCCTaGTCCAGGGCCGTCACTCGG +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEGGSEA*SRAVTR
Trigger: CCGAGTGACGGCCCTGGAGCAGGCCTCGGAGCCCCC...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGCCGGTCCTCGCCTCCTaGCGGAGCAGTGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: KEVSTFCLTWYTGLWAMRPVLAS*RSSAGI
Trigger: AATCCCAGCACTGCTCCGGCAGGAGGCGAGGACCGG...CCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp GGCCAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATAACAGGGGGTGCCAGTaGAGAGCCACCGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GQRGQHLLLDLVHWLVGHNRGCQ*RATGPR
Trigger: GCGAGGACCGGTGGCTCTGCACTGGCACCCCCTGTT...ATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGGGCCCGCGTCGTGGCTaGGCTCCAGGTGCTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRGPRRG*APGALP
Trigger: CGGCAGAGCACCTGGAGCCCAGCCACGACGCGGGCC...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGGGCCCGTGTAGCCGAGGTCAGCACCTTCTaGTTGACCTGGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: RLRDCHGIVVLAVGARVAEVSTF*LTWYTG
Trigger: GCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTC...GGCTACACGGGCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAAGAGGAGCCGTCCAGCTaGCGCCGCTCGTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEEEPSS*RRSSRL
Trigger: GAGCCTGGACGAGCGGCGGCAGCTGGACGGCTCCTC...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCAGCGTCCACGGCGTTCTaGAGGGCCTGCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPASTAF*RACREE
Trigger: CTCCTCCCTGCAGGCCCTGCAGAACGCCGTGGACGC...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGGGCCCGTGTAGCCCTTGACCTGGTACACTaGCTTGTGGGCCATGCGGTA +
Preference number: 4 (lower is better)
Translates to: RLRDCHGIVVLAVGARVALDLVH*LVGHAV
Trigger: TACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAG...GGCTACACGGGCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGCGCGTGGCGTCCCTCTaGCCCTCCCGGATGACGTCC +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRRVASL*PSRMTS
Trigger: GGACGTCATCCGGGAGGGCCAGAGGGACGCCACGCG...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGTCGCGGCCCGCGTCGTaGCTGGGCTCCAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKSRPAS*LGSRCS
Trigger: AGAGCACCTGGAGCCCAGCCACGACGCGGGCCGCGA...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GGCCAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGGTGTCCTCAGCCTCTaGCTTCCAGACCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GQRGQHLLLDLVHWLVGHGVLSL*LPDPRC
Trigger: ACACCTGGGGTCTGGAAGGCAGAGGCTGAGGACACC...ATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp GGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGTACATCCCTGCGGACACGGCTaGTGCGAGTGGATGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GQHLLLDLVHWLVGHAVHPCGHG*CEWMRN
Trigger: ATTCCTCATCCACTCGCAGCAGCCGTGTCCGCAGGG...ATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp AAATGGCCAAGCCCCATGTGGTTACAGGGAAGCCACGTACACCACACCATCTTTGCGTTCTGCAGGGCCTaGAGGGAGGAGCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KWPSPMWLQGSHVHHTIFAFCRA*REEPSS
Trigger: GCTGGACGGCTCCTCCCTGCAGGCCCTGCAGAACGC...AAAGATGGTGTGGTGTACGTGGCTTCCCTGTAACCACATGGGGCTTGGCCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AAATGGCCAAGCCCCATGTGGTTACAGGGAAGCCACGTACACCACACCATCTTTTCGCCCTCCGCTTTGTaGGCGTCCACGGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: KWPSPMWLQGSHVHHTIFSPSAL*ASTASD
Trigger: GTCGCTGGCCGTGGACGCGCACAAAGCGGAGGGCGA...AAAGATGGTGTGGTGTACGTGGCTTCCCTGTAACCACATGGGGCTTGGCCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TGGCTTGTGGGCCATGCGGTACATGACTTTGACTTTCTGGCAGTCTGGAGCTCCCTAGTACTGGAAGCCTaGGCCCATGCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WLVGHAVHDFDFLAVWSSLVLEA*AHAPSS
Trigger: GCTGCTGGGGGCATGGGCCCAGGCTTCCAGTACTAG...GGAGCTCCAGACTGCCAGAAAGTCAAAGTCATGTACCGCATGGCCCACAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp GCCAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGGACTTTCTGGCAGTCTaGAGCTCCCTGCGGACACGG +
Preference number: 4 (lower is better)
Translates to: AKEVSTFCLTWYTGLWAMDFLAV*SSLRTR
Trigger: CCGTGTCCGCAGGGAGCTCCAGACTGCCAGAAAGTC...CATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp CAGGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGGGCGCTCAGGGATTGCCATaGAATCGTGGTGCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: QDLQAQGLPWNRGARSWGAQGLP*NRGARS
Trigger: ACTGCGAGCACCACGATTCCATGGCAATCCCTGAGC...GCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGTCGTTGCTCAGGCTCTaGAGCTCCCGCGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRSLLRL*SSRASP
Trigger: CGGGCTGGCGCGGGAGCTCCAGAGCCTGAGCAACGA...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGGGCCCGTGTAGCCGACCAGCTTGGACATTaGGTAGGGGCACCAGTTACT +
Preference number: 4 (lower is better)
Translates to: RLRDCHGIVVLAVGARVADQLGH*VGAPVT
Trigger: AGTAACTGGTGCCCCTACCCAATGTCCAAGCTGGTC...GGCTACACGGGCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR TCA 90 bp CTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGTACATGACTTTGACGGGGGCCCCCAAGGCTaGACAGCAAGCTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LLLDLVHWLVGHAVHDFDGGPQG*TASSGS
Trigger: TGATCCTGAGCTTGCTGTTCAGCCTTGGGGGCCCCC...GTCAAAGTCATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGTCGTCATCCAGCGCCTaGACTTGGCTCCGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKSSSSA*TWLRSR
Trigger: GCGGCTCCGGAGCCAAGTGCAGGCGCTGGATGACGA...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GCTGTCACCAGGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCACTCCTGCCGGAGCAGTaGTGGGATTCTGGAATCCAT +
Preference number: 4 (lower is better)
Translates to: AVTRICRLRDCHGIVVLALLPEQ*WDSGIH
Trigger: ATGGATTCCAGAATCCCAGCACTGCTCCGGCAGGAG...TGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp CTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGTACATGACTTTGACCAGGTCAACAGGGGGTaGCAGTGCAGAGCCACCGGT +
Preference number: 4 (lower is better)
Translates to: LLLDLVHWLVGHAVHDFDQVNRG*QCRATG
Trigger: ACCGGTGGCTCTGCACTGGCACCCCCTGTTGACCTG...GTCAAAGTCATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp CAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGTACATGACGGATCATCTTGGTGGTaGGGCAGGCTCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: QHLLLDLVHWLVGHAVHDGSSWW*GRLSSH
Trigger: GTGTGAGCTGAGCCTGCCCCACCACCAAGATGATCC...GTCATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGGGCTTTCCACAGGCCTaGCAGGCTGTCTGCCACCCG +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRGFPQA*QAVCHP
Trigger: CGGGTGGCAGACAGCCTGCCAGGCCTGTGGAAAGCC...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGGGCCCCTGCCGGAGCAGTGCTaGGATTCTGGAATCCATTAT +
Preference number: 4 (lower is better)
Translates to: GSAGSGIAMESWCSQLGPLPEQC*DSGIHY
Trigger: ATAATGGATTCCAGAATCCCAGCACTGCTCCGGCAG...GGGCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCAGGTGTCCTCAGCCTCTaGCTTCCAGACCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPGVLSL*LPDPRC
Trigger: ACACCTGGGGTCTGGAAGGCAGAGGCTGAGGACACC...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AAATGGCCAAGCCCCATGTGGTTACAGGGAAGCCACGTACACCACACCATCTTTGTCCTACGGGGTCCTTaGCGGTGTCCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KWPSPMWLQGSHVHHTIFVLRGP*RCPQPL
Trigger: CAGAGGCTGAGGACACCGGCAAGGACCCCGTAGGAC...AAAGATGGTGTGGTGTACGTGGCTTCCCTGTAACCACATGGGGCTTGGCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp CAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGTGCGGACACGGCTGCTaGGAGTGGATGAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: QRGQHLLLDLVHWLVGHACGHGC*EWMRNF
Trigger: GAAATTCCTCATCCACTCGCAGCAGCCGTGTCCGCA...CGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCACCCTGCGGACACGGCTaGTGCGAGTGGATGAGGAAT +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPPCGHG*CEWMRN
Trigger: ATTCCTCATCCACTCGCAGCAGCCGTGTCCGCAGGG...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAAGCCATGGAATCGTGGTaGTCGCAGTTGGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEAMESW*SQLGPV
Trigger: CACGGGCCCCAACTGCGAGCACCACGATTCCATGGC...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GCCAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGTGCAGGCTCAGGGATTaGCATGGAATCGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: AKEVSTFCLTWYTGLWAMCRLRD*HGIVVL
Trigger: GAGCACCACGATTCCATGGCAATCCCTGAGCCTGCA...CATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp GCCAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGGCTGTCACCAGGATCTaGAGGCTCAGGGATTGCCAT +
Preference number: 4 (lower is better)
Translates to: AKEVSTFCLTWYTGLWAMAVTRI*RLRDCH
Trigger: ATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGC...CATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCAGCCTGGCAGGCTGTCTaGCACCCGGTGCACATCATT +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPAWQAV*HPVHII
Trigger: AATGATGTGCACCGGGTGGCAGACAGCCTGCCAGGC...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAAGTAAAGTGCTGGGCGTaGAGGCGGTCCTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEVKCWA*RRSSTS
Trigger: GGACGTGGAGGACCGCCTGCACGCCCAGCACTTTAC...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp CAAGGTTCAGGCTTCCTAGGACCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTTCTGAGATCGAGCGGTaGAGGGTAAAGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QGSGFLGPCPARRSIPVLSEIER*RVKCWA
Trigger: CGCCCAGCACTTTACCCTGCACCGCTCGATCTCAGA...AAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGGCAACTCCTCCTCCCTaGGGGCCGTGGTCATGTGCA +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRATPPP*GPWSCA
Trigger: TGCACATGACCACGGCCCGCAGGGAGGAGGAGTTGC...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGCCACCCTGCAGGTGCTaGAGCGTGAGGTTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRPPCRC*SVRLSS
Trigger: GGAGCTCAACCTCACGCTGCAGCACCTGCAGGGTGG...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGCCGCTAGCGGCGTCCTaGAGGGCCACGCGGATCTGC +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRPLAAS*RATRIC
Trigger: GCAGATCCGCGTGGCCCTGCAGGACGCCGCTAGCGG...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCACTGCTCAGCATGGTCTaGAGCTTCCCCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPLLSMV*SFPRSR
Trigger: CCTGGACCTGGGGAAGCTGCAGACCATGCTGAGCAG...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp CAAGGTTCAGGCTTCCTAGGACCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTGTGCTTCCACTCCCCTaGCCAGTGGTACAGACTGGA +
Preference number: 4 (lower is better)
Translates to: QGSGFLGPCPARRSIPVLVLPLP*PVVQTG
Trigger: TCCAGTCTGTACCACTGGGCAGGGGAGTGGAAGCAC...AAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGTACATTCAGGATCATCTTGGTaGTGGGGCAGGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GQHLLLDLVHWLVGHAVHSGSSW*WGRLSS
Trigger: TGAGCTGAGCCTGCCCCACCACCAAGATGATCCTGA...ATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGCTAGTACTGGAAGCCTaGGCCCATGCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKLVLEA*AHAPSS
Trigger: GCTGCTGGGGGCATGGGCCCAGGCTTCCAGTACTAG...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGTACATAGACCCCAGGTGTCCTaGAGCTCTGCAGATCAGAGA +
Preference number: 4 (lower is better)
Translates to: GQHLLLDLVHWLVGHAVHRPQVS*SSADQR
Trigger: TCTCTGATCTGCAGAGCTCCAGGACACCTGGGGTCT...ATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp AAATGGCCAAGCCCCATGTGGTTACAGGGAAGCCACGTACACCACACCATCTTTCTGTGGAAGAGCCGCTaGTGCTGCTCCAAGCTGCGC +
Preference number: 4 (lower is better)
Translates to: KWPSPMWLQGSHVHHTIFLWKSR*CCSKLR
Trigger: GCGCAGCTTGGAGCAGCACCAGCGGCTCTTCCACAG...AAAGATGGTGTGGTGTACGTGGCTTCCCTGTAACCACATGGGGCTTGGCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp CAGGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGGGCAGGGGCACCAGTTACTaGAAAACAAGCCAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QDLQAQGLPWNRGARSWGRGTSY*KTSQRR
Trigger: TCTCCTCTGGCTTGTTTTCCAGTAACTGGTGCCCCT...GCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR TCA 90 bp AAATGGCCAAGCCCCATGTGGTTACAGGGAAGCCACGTACACCACACCATCTTTATCGGCTTGGAGCTCTaGGATCGAGCGGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KWPSPMWLQGSHVHHTIFIGLEL*DRAVQG
Trigger: ACCCTGCACCGCTCGATCTCAGAGCTCCAAGCCGAT...AAAGATGGTGTGGTGTACGTGGCTTCCCTGTAACCACATGGGGCTTGGCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAACTGGCACAGGCCCTGTaGCCCGTATGTCCACCAAAG +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGELAQAL*PVCPPK
Trigger: CTTTGGTGGACATACGGGTCACAGGGCCTGTGCCAG...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGGGTGTCCTGGAGCTCTaGAGATCAGAGAGGCTAGTA +
Preference number: 4 (lower is better)
Translates to: KEVSTFCLTWYTGLWAMRGVLEL*RSERLV
Trigger: TACTAGCCTCTCTGATCTGCAGAGCTCCAGGACACC...CCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCATTGCCAACACCAGACTaGCATTGGTCCCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPLPTPD*HWSLGP
Trigger: AGGCCCCAGGGACCAATGGCAGTCTGGTGTTGGCAA...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGCCCAGCCCCAGGCGTTaGCAACACCAGACTGCCATT +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKPSPRR*QHQTAI
Trigger: AATGGCAGTCTGGTGTTGGCAACGCCTGGGGCTGGG...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp CAAGGTTCAGGCTTCCTAGGACCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTAGCCCCCAAATGCAGTaGCCGACAGGCTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QGSGFLGPCPARRSIPVLSPQMQ*PTGFSL
Trigger: CAAAGAGAAGCCTGTCGGGCACTGCATTTGGGGGCT...AAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp CAAGGTTCAGGCTTCCTAGGACCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTGACCAGCTTGGACATTaGGTAGGGGCACCAGTTACG +
Preference number: 4 (lower is better)
Translates to: QGSGFLGPCPARRSIPVLDQLGH*VGAPVT
Trigger: CGTAACTGGTGCCCCTACCCAATGTCCAAGCTGGTC...AAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp CAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGTGGTACACTGGCTTGTaGGCCATGCGGTACATGACT +
Preference number: 4 (lower is better)
Translates to: QRGQHLLLDLVHWLVGHAWYTGL*AMRYMT
Trigger: AGTCATGTACCGCATGGCCCACAAGCCAGTGTACCA...CGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp CAAGGTTCAGGCTTCCTAGGACCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTTGACCTGGTACACTaGCTTGTGGGCCATGCGGTA +
Preference number: 4 (lower is better)
Translates to: QGSGFLGPCPARRSIPVLLDLVH*LVGHAV
Trigger: TACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAG...AAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AAATGGCCAAGCCCCATGTGGTTACAGGGAAGCCACGTACACCACACCATCTTTACTCTGGAGATGGCCTaGCGGTTGGCCTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: KWPSPMWLQGSHVHHTIFTLEMA*RLASTS
Trigger: TGACGTGGAGGCCAACCGCCAGGCCATCTCCAGAGT...AAAGATGGTGTGGTGTACGTGGCTTCCCTGTAACCACATGGGGCTTGGCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGACTGCCATTGGTCCCTaGGGCCTCCTGAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKTAIGP*GLLSLV
Trigger: CACAAGGCTCAGGAGGCCCCAGGGACCAATGGCAGT...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGTTGATGAGGTCGGCATaGCCACCCTGCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRLMRSA*PPCRCC
Trigger: GCAGCACCTGCAGGGTGGCCATGCCGACCTCATCAA...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCACCAAGCTGCGCTGAGTaGCGAAGAGTGCGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPPSCAE*RRVRCG
Trigger: TCCACAACGCACTCTTCGCCACTCAGCGCAGCTTGG...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp GCTGTCACCAGGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAAAAGAGCTAGTAAGGTaGCCAGCTTGGACATTGGGT +
Preference number: 4 (lower is better)
Translates to: AVTRICRLRDCHGIVVLAKELVR*PAWTLG
Trigger: ACCCAATGTCCAAGCTGGTCACCTTACTAGCTCTTT...TGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR TCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGCTGACTGGTCCATCCTaGGGTTCCTGGTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRLTGPS*GSWWLS
Trigger: TGACAGCCACCAGGAACCTCAGGATGGACCAGTCAG...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGGTCCCTGGGGCCTCCTaGGCCTTGTGCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRVPGAS*ALCSLF
Trigger: GAAGAGGCTGCACAAGGCTCAGGAGGCCCCAGGGAC...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAAACCGCCCGACATTCTTaGCGTCGTTGCTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGETARHS*RRCSGS
Trigger: AGAGCCTGAGCAACGACGTCAAGAATGTCGGGCGGT...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGACTGGAGTCCGATGGTaGCCTCCAAACACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKTGVRW*PPNTSC
Trigger: GCAGCTGGTGTTTGGAGGTCACCATCGGACTCCAGT...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCAAGCTGGGCGAGTCCATaGTGTCTGATCAGATTGGGG +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPSWASP*CLIRLG
Trigger: CCCCAATCTGATCAGACATCATGGACTCGCCCAGCT...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAACTGAGTGGCGAAGAGTaGGTTGTGGAGGCCGTGAAG +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGELSGEE*VVEAVK
Trigger: CTTCACGGCCTCCACAACGCACTCTTCGCCACTCAG...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp CAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGATGACTTTGACTTTCTaGCAGTCTGGAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QRGQHLLLDLVHWLVGHAMTLTF*QSGAPC
Trigger: GCAGGGAGCTCCAGACTGCCAGAAAGTCAAAGTCAT...CGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGATTGCCATGGAATCGTaGTGCTCGCAGTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRIAMES*CSQLGP
Trigger: GGGCCCCAACTGCGAGCACCACGATTCCATGGCAAT...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp CTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGTACATGACTTTGACTTTATTGCCATGGAATCGTaGTGCTCGCAGTTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LLDLVHWLVGHAVHDFDFIAMES*CSQLGP
Trigger: GGGCCCCAACTGCGAGCACCACGATTCCATGGCAAT...AAAGTCAAAGTCATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCAGCTCAGGGATTGCCATaGAATCGTGGTGCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPAQGLP*NRGARS
Trigger: ACTGCGAGCACCACGATTCCATGGCAATCCCTGAGC...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGAGATGGCCTGGCGGTTaGCCTCCACGTCAAGAGACA +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKRWPGG*PPRQET
Trigger: TGTCTCTTGACGTGGAGGCCAACCGCCAGGCCATCT...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGTTCCCAAAGAGGCTGTaGAAGAGCCGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRFPKRL*KSRWCC
Trigger: GCAGCACCAGCGGCTCTTCCACAGCCTCTTTGGGAA...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGCCCAGTGGTACAGACTaGAGTCCGATGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKPSGTD*SPMVTS
Trigger: GGAGGTCACCATCGGACTCCAGTCTGTACCACTGGG...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
3UTR CAA 72 bp GAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTaGTGGGCCATGCGGTACATGACTTTGACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: EVSTFCLTWYTG*WAMRYMTLTFW
Trigger: CCAGAAAGTCAAAGTCATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR TCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCATCAGCACCTTCTGCTTaGCCTGGTACACTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPSAPSA*PGTLAC
Trigger: ACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGA...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGTCTGGCCCTCCCGGATaGCGTCCAGGTCTAAATAGA +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRSGPPG*RPGLNR
Trigger: TCTATTTAGACCTGGACGTCATCCGGGAGGGCCAGA...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGCGAGTCCATGATGTCTaGTCAGATTGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRRVHDV*SDWGWG
Trigger: ACCCCAGCCCCAATCTGATCAGACATCATGGACTCG...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAAGACAGACCAACTGAATaGCCTCCAGCCCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEDRPTE*PPAHPW
Trigger: CCAAGGATGGGCTGGAGGTCATTCAGTTGGTCTGTC...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGTGCAGGCTCAGGGATTaGCATGGAATCGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKCRLRD*HGIVVL
Trigger: GAGCACCACGATTCCATGGCAATCCCTGAGCCTGCA...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAAGCTGTCACCAGGATCTaGAGGCTCAGGGATTGCCAT +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEAVTRI*RLRDCH
Trigger: ATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGC...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCCACCCTGCAGGTaGTGCAGCGTGAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRWPPCR*CSVRLS
Trigger: GCTCAACCTCACGCTGCAGCACCTGCAGGGTGGCCA...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCTCCCAGCCGAGCGCCTaGTCCTGCAGCCCGCTAGCG +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTSQPSA*SCSPLA
Trigger: CGCTAGCGGGCTGCAGGAGCAGGCGCTCGGCTGGGA...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCATTGAACTTCACTGTCTaGAGGGCAGCCGTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPLNFTV*RAAVPS
Trigger: AGAAGGGACGGCTGCCCTGCAGACAGTGAAGTTCAA...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAACATGGCAAAGACCGTTaGTGTGCTTCCACTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEHGKDR*CASTPL
Trigger: CAGGGGAGTGGAAGCACAGCAACGGTCTTTGCCATG...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGCAGGGTAAAGTGCTaGGCGTGCAGGCGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRCRVKC*ACRRSS
Trigger: GGAGGACCGCCTGCACGCCCAGCACTTTACCCTGCA...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AAATGGCCAAGCCCCATGTGGTTACAGGGAAGCCACGTACACCACACCATCTTTACTCACTGTTCCACATaGCTGGGGAGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KWPSPMWLQGSHVHHTIFTHCST*LGRPQE
Trigger: TTCCTGAGGCCTCCCCAGCCATGTGGAACAGTGAGT...AAAGATGGTGTGGTGTACGTGGCTTCCCTGTAACCACATGGGGCTTGGCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GGCCAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCAGTGCTGGGATTCTaGAATCCATTATCCGTCCTA +
Preference number: 4 (lower is better)
Translates to: GQRGQHLLLDLVHWLVGHAVLGF*NPLSVL
Trigger: TAGGACGGATAATGGATTCCAGAATCCCAGCACTGC...ATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR GCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGGGTGTCCTGGAGCTCTaGAGATCAGAGAGGCTAGTA +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRGVLEL*RSERLV
Trigger: TACTAGCCTCTCTGATCTGCAGAGCTCCAGGACACC...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGCCCAGCAGATGTTCCTaGTGTTCCTGTTGCACCTCA +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRPSRCS*CSCCTS
Trigger: TGAGGTGCAACAGGAACAGCAGGAACATCTGCTGGG...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGCTGTCTGCCACCCGGTaGACATCATTCTGGAGATCT +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKLSATR*TSFWRS
Trigger: AGATCTCCAGAATGATGTGCACCGGGTGGCAGACAG...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTCCTCCAGGGTGTACTaGAACTCCTCCTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRSSRVY*NSSSLR
Trigger: CCGCAGGGAGGAGGAGTTGCAGTACACCCTGGAGGA...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATATCGGCATGGCCACCCTaGAGGTGCTGCAGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLISAWPP*RCCSVR
Trigger: CCTCACGCTGCAGCACCTGCAGGGTGGCCATGCCGA...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGGCTTCTTCCCTTTCCTaGTCAGCATGGTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRASSLS*SAWSAA
Trigger: AGCTGCAGACCATGCTGAGCAGGAAAGGGAAGAAGC...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGAAGGCGCTGTGCAGCTaGCGCACCTCGTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKKALCS*RTSWRA
Trigger: GGCCCGCCACGAGGTGCGCCAGCTGCACAGCGCCTT...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGACTGTTCCACATGGCTaGGGAGGCCTCAGGAAACTT +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRTVPHG*GGLRKL
Trigger: AAGTTTCCTGAGGCCTCCCCAGCCATGTGGAACAGT...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCGCCGTGTGGTTCACCTaGAGCTCCTCCACCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTAVWFT*SSSTCR
Trigger: GCGGCAGGTGGAGGAGCTGCAGGTGAACCACACGGC...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AAATGGCCAAGCCCCATGTGGTTACAGGGAAGCCACGTACACCACACCATCTTTAGGCTGTGCAGGCTTTaGTTAAAGCTCCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: KWPSPMWLQGSHVHHTIFRLCRL*LKLLQM
Trigger: CATCTGGAGGAGCTTTAACCAAAGCCTGCACAGCCT...AAAGATGGTGTGGTGTACGTGGCTTCCCTGTAACCACATGGGGCTTGGCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATATCACGGAGCGCCGTGTaGTTCACCTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLISRSAV*FTCSSS
Trigger: GGAGGAGCTGCAGGTGAACCACACGGCGCTCCGTGA...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGCAGTCCTTCTCATCATaGAGAAATGGCCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKQSFSS*RNGQAP
Trigger: TGGGGCTTGGCCATTTCTCCATGATGAGAAGGACTG...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCGGGGGCCCCCAAGGCTaGACAGCAAGCTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTGGPQG*TASSGS
Trigger: TGATCCTGAGCTTGCTGTTCAGCCTTGGGGGCCCCC...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGAAAGAGCTAGTAAGGTaGCCAGCTTGGACATTGGGT +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKKELVR*PAWTLG
Trigger: ACCCAATGTCCAAGCTGGTCACCTTACTAGCTCTTT...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGGCACCTCAACCTCATTaGTCACTGCAGCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRAPQPH*SLQQGG
Trigger: GCCACCTTGCTGCAGTGATCAATGAGGTTGAGGTGC...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGTCCACCTTGCTAATCTaGTCGAAAGTCTCGTCCGAT +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRSTLLI*SKVSSD
Trigger: ATCGGACGAGACTTTCGATCAGATTAGCAAGGTGGA...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATACCAGGCCGTGCTGTCTaGGAAGGCATGCCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLIPGRAV*EGMPSQ
Trigger: TTGGCTTGGCATGCCTTCTCAGACAGCACGGCCTGG...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAAAACCTCATTGATCACTaGAGCAAGGTGGCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGENLIDH*SKVARF
Trigger: AAACCTGGCCACCTTGCTGCAGTGATCAATGAGGTT...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCAGCGGTCCCGGCGTCTaGTCAGACATCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTSGPGV*SDISSS
Trigger: GCTGGAGGAGATGTCTGAGCAGACGCCGGGACCGCT...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTCAGGATCATCTTGGTaGTGGGGCAGGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRSGSSW*WGRLSS
Trigger: TGAGCTGAGCCTGCCCCACCACCAAGATGATCCTGA...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCCCTCCCTGCGGGCCGTaGTCATGTGCAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTPPCGP*SCAALR
Trigger: TCTCAGAGCTGCACATGACCACGGCCCGCAGGGAGG...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGTCCAGCGCCTGCACTTaGCTCCGGAGCCGCGACGTG +
Preference number: 4 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVSSACT*LRSRDV
Trigger: CACGTCGCGGCTCCGGAGCCAAGTGCAGGCGCTGGA...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCTGCTCCAAGCTGCGCTaGGTGGCGAAGAGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTCSKLR*VAKSAL
Trigger: CAACGCACTCTTCGCCACTCAGCGCAGCTTGGAGCA...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGAAGAGACAGACCAACTaGATGACCTCCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRKRQTN*MTSSPS
Trigger: GGATGGGCTGGAGGTCATTCAGTTGGTCTGTCTCTT...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGCGGTGCAGGGTAAAGTaGTGGGCGTGCAGGCGGTCC +
Preference number: 4 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVRCRVK*WACRRS
Trigger: GGACCGCCTGCACGCCCAGCACTTTACCCTGCACCG...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAAATTCAACGCTCACTaGAAACAGGTAGACACCACG +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRKFNAH*KQVDTT
Trigger: CGTGGTGTCTACCTGTTTGCAGTGAGCGTTGAATTT...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATAAGCTCAGGATCATCTTaGTGGTGGGGCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLISSGSS*WWGRLS
Trigger: GCTGAGCCTGCCCCACCACCAAGATGATCCTGAGCT...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGTACACTGGCTTGTaGGCCATGCGGTACATGACT +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRWYTGL*AMRYMT
Trigger: AGTCATGTACCGCATGGCCCACAAGCCAGTGTACCA...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGTGTCGTCTTCATTACTaGCTAATAGAGACCAAGCAG +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRCRLHY*LIETKQ
Trigger: CTGCTTGGTCTCTATTAGTCAGTAATGAAGACGACA...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCCAGGAAGCCCCCAAATaGAGTGCCCGACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTQEAPK*SARQAS
Trigger: AGAAGCCTGTCGGGCACTGCATTTGGGGGCTTCCTG...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCGGATCATCTTGGTGGTaGGGCAGGCTCAGCTCACAC +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTGSSWW*GRLSSH
Trigger: GTGTGAGCTGAGCCTGCCCCACCACCAAGATGATCC...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGGACTTTCTGGCAGTCTaGAGCTCCCTGCGGACACGG +
Preference number: 4 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKDFLAV*SSLRTR
Trigger: CCGTGTCCGCAGGGAGCTCCAGACTGCCAGAAAGTC...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGATGACTTTGACTTTCTaGCAGTCTGGAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRMTLTF*QSGAPC
Trigger: GCAGGGAGCTCCAGACTGCCAGAAAGTCAAAGTCAT...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGCCTGGACTCTGGAGATaGCCTGGCGGTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVPGLWR*PGGWPP
Trigger: TGGAGGCCAACCGCCAGGCCATCTCCAGAGTCCAGG...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGCACTGTCCTGGACTCTaGAGATGGCCTGGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKHCPGL*RWPGGW
Trigger: CCAACCGCCAGGCCATCTCCAGAGTCCAGGACAGTG...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAAAGTGCTTTCCAATGTTaGCCAAAATGTTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGESAFQC*PKCCLH
Trigger: ATGGAGGCAACATTTTGGCCAACATTGGAAAGCACT...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTTCCTTTCCCTTGGTTaGCCAGGCTGTCGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRFLSLG*PGCRLH
Trigger: ATGAAGACGACAGCCTGGCCAACCAAGGGAAAGGAA...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGGATTACAATTCAAGATaGTATTTTAGGTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRDYNSR*YFRWGH
Trigger: GTGCCCCCACCTAAAATATCATCTTGAATTGTAATC...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGGTGCCCTGTTTGATTTaGTTCCATCACTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRVPCLI*FHHCSC
Trigger: ACAGCTGCAGTGATGGAAGCAAATCAAACAGGGCAC...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCTCCTCCAGATGGGGCTaGAATGCACTTGTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTSSRWG*NALVGR
Trigger: CCTTCCTACAAGTGCATTTCAGCCCCATCTGGAGGA...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGACTTTATTCCAAAGTTaGTCATTAGTGAGGGGGATT +
Preference number: 4 (lower is better)
Translates to: RGTKASSQGGRKENEHRRTLFQS*SLVRGI
Trigger: AATCCCCCTCACTAATGATCAACTTTGGAATAAAGT...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGTGCGGACACGGCTGCTaGGAGTGGATGAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKCGHGC*EWMRNF
Trigger: GAAATTCCTCATCCACTCGCAGCAGCCGTGTCCGCA...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGGAGGTCAGCACCTTCTaGTTGACCTGGTACACTGGC +
Preference number: 4 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKEVSTF*LTWYTG
Trigger: GCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTC...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGGTGTCCACATCGGCTTaGAGCTCTGAGATCGAGCGG +
Preference number: 4 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVVSTSA*SSEIER
Trigger: CCGCTCGATCTCAGAGCTCCAAGCCGATGTGGACAC...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGCACTCCCCTGCCCAGTaGTACAGACTGGAGTCCGAT +
Preference number: 4 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVHSPAQ*YRLESD
Trigger: ATCGGACTCCAGTCTGTACCACTGGGCAGGGGAGTG...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATAACACCACACCATCTTTaGAGAAGGTTTCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLITPHHL*RRFPGK
Trigger: CTTCCCTGGAAACCTTCTGCAAAGATGGTGTGGTGT...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGCCTAGGACCATGTCCTaGCCGGAGAAGCATTCCAGT +
Preference number: 4 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVPRTMS*PEKHSS
Trigger: ACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGG...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGAGACCCCAGGTGTCCTaGAGCTCTGCAGATCAGAGA +
Preference number: 4 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVRPQVS*SSADQR
Trigger: TCTCTGATCTGCAGAGCTCCAGGACACCTGGGGTCT...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCAGGTTTGAAGCTGACTaGTCCATCCTGAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTRFEAD*SILRFL
Trigger: CAGGAACCTCAGGATGGACCAGTCAGCTTCAAACCT...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATTTGTTATTGATCCCTaGGTTAACTCAAACCATACT +
Preference number: 4 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEFVIDP*VNSNHT
Trigger: AGTATGGTTTGAGTTAACCCAGGGATCAATAACAAA...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGTTTAAACATTCCTCCTaGGGAAGAATGTCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKFKHSS*GRMSFY
Trigger: ATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCAACTCGTGCCCTGTTTaGTTTGCTTCCATCACTGCA +
Preference number: 4 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTNSCPV*FASITA
Trigger: TGCAGTGATGGAAGCAAATCAAACAGGGCACGAGTT...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR GCA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGAGTCCATTTTCACACTaGTATCAAGAATTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRSPFSH*YQELPK
Trigger: CTTGGGCAATTCTTGATAGCAGTGTGAAAATGGACT...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGCGGTGCACATCATTCTaGAGATCTCCCAGCAGATGT +
Preference number: 4 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKRCTSF*RSPSRC
Trigger: ACATCTGCTGGGAGATCTCCAGAATGATGTGCACCG...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGATCACTGCAGCAAGGTaGCCAGGTTTGAAGCTGACT +
Preference number: 4 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVITAAR*PGLKLT
Trigger: AGTCAGCTTCAAACCTGGCCACCTTGCTGCAGTGAT...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATAGGAAACTTACAATCATaGCAGACAGTGAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLIGNLQS*QTVKRN
Trigger: GTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGGGAAAGAGGTTTAATTaGCTCACTGTTCCACATGGC +
Preference number: 4 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKGKRFN*LTVPHG
Trigger: GCCATGTGGAACAGTGAGTCAATTAAACCTCTTTCC...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGTGTTCTCCTGGACCTTaGCCTCAAATTTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVCSPGP*PQIWHQ
Trigger: TTGGTGCCAAATTTGAGGCCAAGGTCCAGGAGAACA...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CCA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATAACGTTTGGCATTTCTTaGTCTTTACCCTATGTAAGG +
Preference number: 4 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLITFGIS*SLPYVR
Trigger: CCTTACATAGGGTAAAGACCAAGAAATGCCAAACGT...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR TCA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGAATCATCAGATCTCGTaGGAACTATCACAAGAACAG +
Preference number: 4 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKNHQIS*ELSQEQ
Trigger: CTGTTCTTGTGATAGTTCTCACGAGATCTGATGATT...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 90 bp GGCGGCCTCCTCGCGGCCCGCGTCGTGGCTGGGCTCCAGGTGCTCTaGCGGCCGCGGGGGCTCCGAGGCCTGCTCCAGGGCCGTCACTCG +
Preference number: 5 (lower is better)
Translates to: GGLLAARVVAGLQVL*RPRGLRGLLQGRHS
Trigger: CGAGTGACGGCCCTGGAGCAGGCCTCGGAGCCCCCGCGGCCGGCAGAGCACCTGGAGCCCAGCCACGACGCGGGCCGCGAGGAGGCCGCC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 90 bp GTGGTGGCGGCCTCCTCGCGGCCCGCGTCGTGGCTGGGCTCCAGGTaGTCTGCCGGCCGCGGGGGCTCCGAGGCCTGCTCCAGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: VVAASSRPASWLGSR*SAGRGGSEACSRAV
Trigger: GACGGCCCTGGAGCAGGCCTCGGAGCCCCCGCGGCCGGCAGAGCACCTGGAGCCCAGCCACGACGCGGGCCGCGAGGAGGCCGCCACCAC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 90 bp TCGGCCGCGGCCGCCTTCAGCGCGCCCACCTCGTCATCCAGCGCCTaGACTTGGCTCCGGAGCCGCGACGTGGCCGCCCGCGCCCGCTCG +
Preference number: 5 (lower is better)
Translates to: SAAAAFSAPTSSSSA*TWLRSRDVAARARS
Trigger: CGAGCGGGCGCGGGCGGCCACGTCGCGGCTCCGGAGCCAAGTGCAGGCGCTGGATGACGAGGTGGGCGCGCTGAAGGCGGCCGCGGCCGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 90 bp GCCGTCACTCGGGCGGCCAGCTCGTCCCAGCCGAGCGCCTGCTCCTaGAGCCCGCTAGCGGCGTCCTGCAGGGCCACGCGGATCTGCTCG +
Preference number: 5 (lower is better)
Translates to: AVTRAASSSQPSACS*SPLAASCRATRICS
Trigger: CGAGCAGATCCGCGTGGCCCTGCAGGACGCCGCTAGCGGGCTGCAGGAGCAGGCGCTCGGCTGGGACGAGCTGGCCGCCCGAGTGACGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 90 bp TCCAGGGCCGTCACTCGGGCGGCCAGCTCGTCCCAGCCGAGCGCCTaGTCCTGCAGCCCGCTAGCGGCGTCCTGCAGGGCCACGCGGATC +
Preference number: 5 (lower is better)
Translates to: SRAVTRAASSSQPSA*SCSPLAASCRATRI
Trigger: GATCCGCGTGGCCCTGCAGGACGCCGCTAGCGGGCTGCAGGAGCAGGCGCTCGGCTGGGACGAGCTGGCCGCCCGAGTGACGGCCCTGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 90 bp GCGTCCACGGCCAGCGACACGGCGTCCACGGCGTTCTGCAGGGCCTaGAGGGAGGAGCCGTCCAGCTGCCGCCGCTCGTCCAGGCTCACC +
Preference number: 5 (lower is better)
Translates to: ASTASDTASTAFCRA*REEPSSCRRSSRLT
Trigger: GGTGAGCCTGGACGAGCGGCGGCAGCTGGACGGCTCCTCCCTGCAGGCCCTGCAGAACGCCGTGGACGCCGTGTCGCTGGCCGTGGACGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 90 bp GCTTTGTGCGCGTCCACGGCCAGCGACACGGCGTCCACGGCGTTCTaGAGGGCCTGCAGGGAGGAGCCGTCCAGCTGCCGCCGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: ALCASTASDTASTAF*RACREEPSSCRRSS
Trigger: GGACGAGCGGCGGCAGCTGGACGGCTCCTCCCTGCAGGCCCTGCAGAACGCCGTGGACGCCGTGTCGCTGGCCGTGGACGCGCACAAAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS TCA 90 bp CTGCCTCCCAGAGCGCCGCGCCCAAGGCACCTGGCACAGGCCCTGTaGCCCGTATGTCCACCAAAGGCTCCGCTTCCTTCTTGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: LPPRAPRPRHLAQAL*PVCPPKAPLPSCPS
Trigger: AGAGGGACAAGAAGGAAGCGGAGCCTTTGGTGGACATACGGGTCACAGGGCCTGTGCCAGGTGCCTTGGGCGCGGCGCTCTGGGAGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 90 bp GGGTGCCAGTGCAGAGCCACCGGTCCTCGCCTCCTGCCGGAGCAGTaGTGGGATTCTGGAATCCATTATCCGTCCTACGGGGTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: GCQCRATGPRLLPEQ*WDSGIHYPSYGVLA
Trigger: GGCAAGGACCCCGTAGGACGGATAATGGATTCCAGAATCCCAGCACTGCTCCGGCAGGAGGCGAGGACCGGTGGCTCTGCACTGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608090.1
ENST00000608753.1
CDS CCA 90 bp CCCAGCTGCGGTGGGGGCGTGGGAGATGTCAGGAGACCACTGGGTTaGTTCTTCCTGCACCTAGCCCAGGCTTCGTTAGGACTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PSCGGGVGDVRRPLG*FFLHLAQASLGLQL
Trigger: GAGCTGGAGTCCTAACGAAGCCTGGGCTAGGTGCAGGAAGAACCAACCCAGTGGTCTCCTGACATCTCCCACGCCCCCACCGCAGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474994.2
ENST00000609457.5
CDS-3UTR CAA 90 bp CAGGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGGGCCGTCCTACGGGGTCCTaGCCGGTGTCCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: QDLQAQGLPWNRGARSWGRPTGS*PVSSAS
Trigger: AGAGGCTGAGGACACCGGCAAGGACCCCGTAGGACG...GCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS GCA 90 bp AGGTCAACAGGGGGTGCCAGTGCAGAGCCACCGGTCCTCGCCTCCTaGCGGAGCAGTGCTGGGATTCTGGAATCCATTATCCGTCCTACG +
Preference number: 5 (lower is better)
Translates to: RSTGGASAEPPVLAS*RSSAGILESIIRPT
Trigger: CGTAGGACGGATAATGGATTCCAGAATCCCAGCACTGCTCCGGCAGGAGGCGAGGACCGGTGGCTCTGCACTGGCACCCCCTGTTGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000608090.1
ENST00000608753.1
CDS-3UTR CAA 90 bp GGATCTGCAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGGGCCCAAGCTCAGGATCATCTaGGTGGTGGGGCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: GSAGSGIAMESWCSQLGPKLRII*VVGQAQ
Trigger: CTGAGCCTGCCCCACCACCAAGATGATCCTGAGCTT...GGGCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS-3UTR CAA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGCGCTCGCCCTCCGCTTaGTGCGCGTCCACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKRSPSA*CASTAS
Trigger: GCTGGCCGTGGACGCGCACAAAGCGGAGGGCGAGCG...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 90 bp GCTGACTGGTCCATCCTGAGGTTCCTGGTGGCTGTCACCAGGATCTaGAGGCTCAGGGATTGCCATGGAATCGTGGTGCTCGCAGTTGGG +
Preference number: 5 (lower is better)
Translates to: ADWSILRFLVAVTRI*RLRDCHGIVVLAVG
Trigger: CCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGCCACCAGGAACCTCAGGATGGACCAGTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372027.10
ENST00000474994.2
ENST00000609457.5
ENST00000610081.5
CDS TCA 90 bp AGCCAGGGCAGCACCTCCAGGCCAAAGAGGTCAGCACCTTCTGCTTaGCCTGGTACACTGGCTTGTGGGCCATGCGGTACCTTTAAGTCC +
Preference number: 5 (lower is better)
Translates to: SQGSTSRPKRSAPSA*PGTLACGPCGTFKS
Trigger: GGACTTAAAGGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTGGCCTGGAGGTGCTGCCCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609457.5
CDS-3UTR CAA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGATCCAGCGCCTGCACTaGGCTCCGGAGCCGCGACGT +
Preference number: 5 (lower is better)
Translates to: RGTKASSQGGRKENEHRRIQRLH*APEPRR
Trigger: ACGTCGCGGCTCCGGAGCCAAGTGCAGGCGCTGGAT...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp AAATGGCCAAGCCCCATGTGGTTACAGGGAAGCCACGTACACCACACCATCTTTCGTCCTACGGGGTCCTaGCCGGTGTCCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: KWPSPMWLQGSHVHHTIFRPTGS*PVSSAS
Trigger: AGAGGCTGAGGACACCGGCAAGGACCCCGTAGGACG...AAAGATGGTGTGGTGTACGTGGCTTCCCTGTAACCACATGGGGCTTGGCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS TCA 90 bp ATCACTGCAGCAAGGTGGCCAGGTTTGAAGCTGACTGGTCCATCCTaGGGTTCCTGGTGGCTGTCACCAGGATCTGCAGGCTCAGGGATT +
Preference number: 5 (lower is better)
Translates to: ITAARWPGLKLTGPS*GSWWLSPGSAGSGI
Trigger: AATCCCTGAGCCTGCAGATCCTGGTGACAGCCACCAGGAACCTCAGGATGGACCAGTCAGCTTCAAACCTGGCCACCTTGCTGCAGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372027.10
ENST00000474994.2
ENST00000609457.5
ENST00000610081.5
CDS-3UTR CAA 90 bp CAGCACCTTCTGCTTGACCTGGTACACTGGCTTGTGGGCCATGCGGTACATGACGTCAGCACCTTCTGCTaGACCTGGTACACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: QHLLLDLVHWLVGHAVHDVSTFC*TWYTGL
Trigger: CAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGAC...GTCATGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608090.1
CDS GCA 90 bp GCACCTAGCCCAGGCTTCGTTAGGACTCCAGCTCCCTGTCAGTCCTaGCCATATCCCAGTCAGGAGACAATATCCAAACCAACCCCTTAC +
Preference number: 5 (lower is better)
Translates to: APSPGFVRTPAPCQS*PYPSQETISKPTPY
Trigger: GTAAGGGGTTGGTTTGGATATTGTCTCCTGACTGGGATATGGGCAGGACTGACAGGGAGCTGGAGTCCTAACGAAGCCTGGGCTAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474994.2
ENST00000609457.5
CDS TCA 90 bp TCACTTTTCCATCTGAGAGCTGGGTGCAAAGGATGGGCTGCTTTCTaGTGGGTTAATCGAGACGAGGTTCCCAGGGGCCTCTCAGCACAC +
Preference number: 5 (lower is better)
Translates to: SLFHLRAGCKGWAAF*WVNRDEVPRGLSAH
Trigger: GTGTGCTGAGAGGCCCCTGGGAACCTCGTCTCGATTAACCCATCAGAAAGCAGCCCATCCTTTGCACCCAGCTCTCAGATGGAAAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474994.2
CDS-3UTR CAA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGACCTGGTACACTGGCTaGTGGGCCATGCGGTACATG +
Preference number: 5 (lower is better)
Translates to: RGTKASSQGGRKENEHRRTWYTG*WAMRYM
Trigger: CATGTACCGCATGGCCCACAAGCCAGTGTACCAGGT...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp CCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCTCATCATGGAGAAATGGCCAACATTCTTGACGTCGTaGCTCAGGCTCTGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: PCPARRSIPVLLIMEKWPTFLTS*LRLWSS
Trigger: GGAGCTCCAGAGCCTGAGCAACGACGTCAAGAATGT...TGGCCATTTCTCCATGATGAGAAGGACTGGAATGCTTCTCCGGGCAGGACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS TCA 90 bp AGCCTCCGTGTCAGGTCCCTTCCTTCTGGGCTTCACTTTTCCATCTaGGAGCTGGGTGCAAAGGATGGGCTGCTTTCTGATGGGTTAATC +
Preference number: 5 (lower is better)
Translates to: SLRVRSLPSGLHFSI*ELGAKDGLLSDGLI
Trigger: GATTAACCCATCAGAAAGCAGCCCATCCTTTGCACCCAGCTCTCAGATGGAAAAGTGAAGCCCAGAAGGAAGGGACCTGACACGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474994.2
CDS GCA 90 bp GCCTCCACGTCAAGAGACAGGTTTCTTATGGCCTGGGTAAGGCTGTaGAGGCTTTGGTTAAAGCTCCTCCAGATGGGGCTGAAATGCACT +
Preference number: 5 (lower is better)
Translates to: ASTSRDRFLMAWVRL*RLWLKLLQMGLKCT
Trigger: AGTGCATTTCAGCCCCATCTGGAGGAGCTTTAACCAAAGCCTGCACAGCCTTACCCAGGCCATAAGAAACCTGTCTCTTGACGTGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372027.10
ENST00000488950.1
ENST00000609457.5
ENST00000610081.5
CDS CCA 90 bp ACTGAAATGCTACCAAGGAAGCCTCCGTGTCAGGTCCCTTCCTTCTaGGCTTCACTTTTCCATCTGAGAGCTGGGTGCAAAGGATGGGCT +
Preference number: 5 (lower is better)
Translates to: TEMLPRKPPCQVPSF*ASLFHLRAGCKGWA
Trigger: AGCCCATCCTTTGCACCCAGCTCTCAGATGGAAAAGTGAAGCCCAGAAGGAAGGGACCTGACACGGAGGCTTCCTTGGTAGCATTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474994.2
CDS-3UTR CAA 90 bp AGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGGTCAGCACCTTCTGCTaGACCTGGTACACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: RGTKASSQGGRKENEHRRVSTFC*TWYTGL
Trigger: CAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGAC...CCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp CAAGGTTCAGGCTTCCTAGGACCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTAAGGCTGTGCAGGCTTaGGTTAAAGCTCCTCCAGAT +
Preference number: 5 (lower is better)
Translates to: QGSGFLGPCPARRSIPVLKAVQA*VKAPPD
Trigger: ATCTGGAGGAGCTTTAACCAAAGCCTGCACAGCCTT...AAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGGGCTTCCATGAGCCCTaGGAAGTTCCCAAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKGFHEP*EVPKEA
Trigger: AGCCTCTTTGGGAACTTCCAAGGGCTCATGGAAGCC...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAACGTGCCCTGTTTGATTaGCTTCCATCACTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGERALFD*LPSLQL
Trigger: CAGCTGCAGTGATGGAAGCAAATCAAACAGGGCACG...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp TGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGTGGCAGGAAGGAGAAGAACTCGTGCCCTGTTaGATTTGCTTCCATCACTGC +
Preference number: 5 (lower is better)
Translates to: WQTVKRNQGIFTRWQEGEELVPC*ICFHHC
Trigger: GCAGTGATGGAAGCAAATCAAACAGGGCACGAGTTC...TTCTCCTTCCTGCCACCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp CAAGGTTCAGGCTTCCTAGGACCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTTTGATGTATGTGGTGTaGAACTTCACTGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QGSGFLGPCPARRSIPVLLMYVV*NFTVCR
Trigger: CCTGCAGACAGTGAAGTTCAACACCACATACATCAA...AAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATACACCGCCCGACATTCTaGACGTCGTTGCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLIHRPTF*TSLLRL
Trigger: GAGCCTGAGCAACGACGTCAAGAATGTCGGGCGGTG...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp TTCCACATGGCTGGGGAGGCCTCAGGAAACTTACAATCATGGCAGACAGTGAAGTACACCACACCATCTTaGCAGAAGGTTTCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: FHMAGEASGNLQSWQTVKYTTPS*QKVSRE
Trigger: TTCCCTGGAAACCTTCTGCAAAGATGGTGTGGTGTA...CTTCACTGTCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGGAGATGGCCTGGCGGTaGGCCTCCACGTCAAGAGAC +
Preference number: 5 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKEMAWR*ASTSRD
Trigger: GTCTCTTGACGTGGAGGCCAACCGCCAGGCCATCTC...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGGGGTGTGGTGAAGAGTaGGAGCCCAGGCCGTGCTGT +
Preference number: 5 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKGCGEE*EPRPCC
Trigger: ACAGCACGGCCTGGGCTCCAACTCTTCACCACACCC...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp CAAGGTTCAGGCTTCCTAGGACCATGTCCTGCCCGGAGAAGCATTCCAGTCCTTCACTTTATTCCAAAGTaGATCATTAGTGAGGGGGAT +
Preference number: 5 (lower is better)
Translates to: QGSGFLGPCPARRSIPVLHFIPK*IISEGD
Trigger: ATCCCCCTCACTAATGATCAACTTTGGAATAAAGTG...AAGGACTGGAATGCTTCTCCGGGCAGGACATGGTCCTAGGAAGCCTGAACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATATGCACCTCAACCTCATaGATCACTGCAGCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLICTSTS*ITAARW
Trigger: CCACCTTGCTGCAGTGATCAATGAGGTTGAGGTGCA...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp CTTCACAAGGTGGCAGGAAGGAGAATGAACACAGGAGGAACTATCAAACTTATAGTGTTCTCCTGGACCTaGGCCTCAAATTTGGCACCA +
Preference number: 5 (lower is better)
Translates to: LHKVAGRRMNTGGTIKLIVFSWT*ASNLAP
Trigger: TGGTGCCAAATTTGAGGCCAAGGTCCAGGAGAACAC...TATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCTTCCTGCCACCTTGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGAAGCTCAGGATCATCTaGGTGGTGGGGCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVKLRII*VVGQAQ
Trigger: CTGAGCCTGCCCCACCACCAAGATGATCCTGAGCTT...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp GGAAACTTACAATCATGGCAGACAGTGAAGAGGAACCAAGGCATCTTCACAAGGGTTGGTTTAATCCCATaGCCCTCTAGTGCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: GNLQSWQTVKRNQGIFTRVGLIP*PSSAFQ
Trigger: TTGGAAAGCACTAGAGGGCAATGGGATTAAACCAAC...CCTTGTGAAGATGCCTTGGTTCCTCTTCACTGTCTGCCATGATTGTAAGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp AGGAGAATGAACACAGGAGGAACTATCAAACTTATAAAATCATCAGATCTCGTGCAGTCCTTCACGTACTaGATGAGGTCGGCATGGCCA +
Preference number: 5 (lower is better)
Translates to: RRMNTGGTIKLIKSSDLVQSFTY*MRSAWP
Trigger: TGGCCATGCCGACCTCATCAAGTACGTGAAGGACTG...CACGAGATCTGATGATTTTATAAGTTTGATAGTTCCTCCTGTGTTCATTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp TTTAAACATTCCTCCTGGGGAAGAATGTCTTTCTATCATACGATAAGGGAGAAGTTTCCTTTCCCTTGGTaGGCCAGGCTGTCGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FKHSSWGRMSFYHTIREKFPFPW*ARLSSS
Trigger: TGAAGACGACAGCCTGGCCAACCAAGGGAAAGGAAA...CTTCTCCCTTATCGTATGATAGAAAGACATTCTTCCCCAGGAGGAATGTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCATGCGGTACATGACTTaGACTTTCTGGCAGTCTGGA +
Preference number: 5 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTMRYMT*TFWQSG
Trigger: TCCAGACTGCCAGAAAGTCAAAGTCATGTACCGCAT...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS-3UTR CAA 90 bp GAAAAGTTTAAAGTGTTGTACAGAAGTTTCCAACCACAGGAGGAGCAAAACACCCACGTTTGGCATTTCTaGGTCTTTACCCTATGTAAG +
Preference number: 5 (lower is better)
Translates to: EKFKVLYRSFQPQEEQNTHVWHF*VFTLCK
Trigger: CTTACATAGGGTAAAGACCAAGAAATGCCAAACGTG...GGTGTTTTGCTCCTCCTGTGGTTGGAAACTTCTGTACAACACTTTAAACTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 72 bp GACGTGGCCGCCCGCGCCCGCTCGCCCTCCGCTTTGTaGGCGTCCACGGCCAGCGACACGGCGTCCACGGCG +
Preference number: 6 (lower is better)
Translates to: DVAARARSPSAL*ASTASDTASTA
Trigger: CGCCGTGGACGCCGTGTCGCTGGCCGTGGACGCGCACAAAGCGGAGGGCGAGCGGGCGCGGGCGGCCACGTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 72 bp GCCGCCTTCAGCGCGCCCACCTCGTCATCCAGCGCCTaGACTTGGCTCCGGAGCCGCGACGTGGCCGCCCGC +
Preference number: 6 (lower is better)
Translates to: AAFSAPTSSSSA*TWLRSRDVAAR
Trigger: GCGGGCGGCCACGTCGCGGCTCCGGAGCCAAGTGCAGGCGCTGGATGACGAGGTGGGCGCGCTGAAGGCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS CCA 72 bp TTCAGCGCGCCCACCTCGTCATCCAGCGCCTGCACTTaGCTCCGGAGCCGCGACGTGGCCGCCCGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: FSAPTSSSSACT*LRSRDVAARAR
Trigger: GCGGGCGCGGGCGGCCACGTCGCGGCTCCGGAGCCAAGTGCAGGCGCTGGATGACGAGGTGGGCGCGCTGAA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS CAA 72 bp CTTCAGCGCGCCCACCTCGTCATCCAGCGCCTGCACTaGGCTCCGGAGCCGCGACGTGGCCGCCCGCGCCCG +
Preference number: 6 (lower is better)
Translates to: LQRAHLVIQRLH*APEPRRGRPRP
Trigger: CGGGCGCGGGCGGCCACGTCGCGGCTCCGGAGCCAAGTGCAGGCGCTGGATGACGAGGTGGGCGCGCTGAAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 72 bp GCGTCCACGGCCAGCGACACGGCGTCCACGGCGTTCTaGAGGGCCTGCAGGGAGGAGCCGTCCAGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: ASTASDTASTAF*RACREEPSSCR
Trigger: GCGGCAGCTGGACGGCTCCTCCCTGCAGGCCCTGCAGAACGCCGTGGACGCCGTGTCGCTGGCCGTGGACGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS TCA 72 bp CCCCGGCCTCGGCCTCGCAGCACCGCCCGACATTCTTaGCGTCGTTGCTCAGGCTCTGGAGCTCCCGCGCCA +
Preference number: 6 (lower is better)
Translates to: PRPRPRSTARHS*RRCSGSGAPAP
Trigger: TGGCGCGGGAGCTCCAGAGCCTGAGCAACGACGTCAAGAATGTCGGGCGGTGCTGCGAGGCCGAGGCCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS CCA 72 bp GGATCCTGCCTCCCAGAGCGCCGCGCCCAAGGCACCTaGCACAGGCCCTGTGACCCGTATGTCCACCAAAGG +
Preference number: 6 (lower is better)
Translates to: GSCLPERRAQGT*HRPCDPYVHQR
Trigger: CCTTTGGTGGACATACGGGTCACAGGGCCTGTGCCAGGTGCCTTGGGCGCGGCGCTCTGGGAGGCAGGATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS TCA 72 bp AGAGCGCCGCGCCCAAGGCACCTGGCACAGGCCCTGTaGCCCGTATGTCCACCAAAGGCTCCGCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: RAPRPRHLAQAL*PVCPPKAPLPS
Trigger: AGAAGGAAGCGGAGCCTTTGGTGGACATACGGGTCACAGGGCCTGTGCCAGGTGCCTTGGGCGCGGCGCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 72 bp GCTTGGAGCTCTGAGATCGAGCGGTGCAGGGTAAAGTaGTGGGCGTGCAGGCGGTCCTCCACGTCCTGTCGC +
Preference number: 6 (lower is better)
Translates to: AWSSEIERCRVK*WACRRSSTSCR
Trigger: GCGACAGGACGTGGAGGACCGCCTGCACGCCCAGCACTTTACCCTGCACCGCTCGATCTCAGAGCTCCAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS CCA 72 bp TGGAGCTCTGAGATCGAGCGGTGCAGGGTAAAGTGCTaGGCGTGCAGGCGGTCCTCCACGTCCTGTCGCAGC +
Preference number: 6 (lower is better)
Translates to: WSSEIERCRVKC*ACRRSSTSCRS
Trigger: GCTGCGACAGGACGTGGAGGACCGCCTGCACGCCCAGCACTTTACCCTGCACCGCTCGATCTCAGAGCTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS CCA 72 bp GGAAGAGCCGCTGGTGCTGCTCCAAGCTGCGCTGAGTaGCGAAGAGTGCGTTGTGGAGGCCGTGAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: GRAAGAAPSCAE*RRVRCGGREGR
Trigger: CCTCCCTTCACGGCCTCCACAACGCACTCTTCGCCACTCAGCGCAGCTTGGAGCAGCACCAGCGGCTCTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS CAA 72 bp CCTGGTGGCTGTCACCAGGATCTGCAGGCTCAGGGATaGCCATGGAATCGTGGTGCTCGCAGTTGGGGCCCG +
Preference number: 6 (lower is better)
Translates to: PGGCHQDLQAQG*PWNRGARSWGP
Trigger: CGGGCCCCAACTGCGAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGCCACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372027.10
ENST00000474994.2
ENST00000609457.5
ENST00000610081.5
CDS CAA 90 bp ACCCAGCTGCGGTGGGGGCGTGGGAGATGTCAGGAGACCACTGGGTaGGTTCTTCCTGCACCTAGCCCAGGCTTCGTTAGGACTCCAGCT +
Preference number: 6 (lower is better)
Translates to: TQLRWGRGRCQETTG*VLPAPSPGFVRTPA
Trigger: AGCTGGAGTCCTAACGAAGCCTGGGCTAGGTGCAGGAAGAACCAACCCAGTGGTCTCCTGACATCTCCCACGCCCCCACCGCAGCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474994.2
ENST00000609457.5
CDS TCA 72 bp CCAGGGCACGCGTGGCGTCCCTCTGGCCCTCCCGGATaGCGTCCAGGTCTAAATAGAGCTTCTGGCAATTGC +
Preference number: 6 (lower is better)
Translates to: PGHAWRPSGPPG*RPGLNRASGNC
Trigger: GCAATTGCCAGAAGCTCTATTTAGACCTGGACGTCATCCGGGAGGGCCAGAGGGACGCCACGCGTGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 72 bp TGCAGAGCCACCGGTCCTCGCCTCCTGCCGGAGCAGTaGTGGGATTCTGGAATCCATTATCCGTCCTACGGG +
Preference number: 6 (lower is better)
Translates to: CRATGPRLLPEQ*WDSGIHYPSYG
Trigger: CCCGTAGGACGGATAATGGATTCCAGAATCCCAGCACTGCTCCGGCAGGAGGCGAGGACCGGTGGCTCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608090.1
ENST00000608753.1
CDS CCA 72 bp CCGTATTCTGGAGGTGACCCAGCTGCGGTGGGGGCGTaGGAGATGTCAGGAGACCACTGGGTTGGTTCTTCC +
Preference number: 6 (lower is better)
Translates to: PYSGGDPAAVGA*EMSGDHWVGSS
Trigger: GGAAGAACCAACCCAGTGGTCTCCTGACATCTCCCACGCCCCCACCGCAGCTGGGTCACCTCCAGAATACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474994.2
ENST00000609457.5
CDS CCA 72 bp GGTGGGGGCGTGGGAGATGTCAGGAGACCACTGGGTTaGTTCTTCCTGCACCTAGCCCAGGCTTCGTTAGGA +
Preference number: 6 (lower is better)
Translates to: GGGVGDVRRPLG*FFLHLAQASLG
Trigger: TCCTAACGAAGCCTGGGCTAGGTGCAGGAAGAACCAACCCAGTGGTCTCCTGACATCTCCCACGCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474994.2
ENST00000609457.5
CDS CAA 72 bp CCCCAGGTCCAGGCTGACGTTGGCTTCCATGAGCCCTaGGAAGTTCCCAAAGAGGCTGTGGAAGAGCCGCTG +
Preference number: 6 (lower is better)
Translates to: PQVQADVGFHEP*EVPKEAVEEPL
Trigger: CAGCGGCTCTTCCACAGCCTCTTTGGGAACTTCCAAGGGCTCATGGAAGCCAACGTCAGCCTGGACCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS TCA 72 bp GCAAGGTGGCCAGGTTTGAAGCTGACTGGTCCATCCTaGGGTTCCTGGTGGCTGTCACCAGGATCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: ARWPGLKLTGPS*GSWWLSPGSAG
Trigger: GCCTGCAGATCCTGGTGACAGCCACCAGGAACCTCAGGATGGACCAGTCAGCTTCAAACCTGGCCACCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372027.10
ENST00000474994.2
ENST00000609457.5
ENST00000610081.5
CDS CCA 72 bp CCCAGGCGTTGCCAACACCAGACTGCCATTGGTCCCTaGGGCCTCCTGAGCCTTGTGCAGCCTCTTCAATTT +
Preference number: 6 (lower is better)
Translates to: PRRCQHQTAIGP*GLLSLVQPLQF
Trigger: AAATTGAAGAGGCTGCACAAGGCTCAGGAGGCCCCAGGGACCAATGGCAGTCTGGTGTTGGCAACGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS GCA 72 bp TCCATCCTGAGGTTCCTGGTGGCTGTCACCAGGATCTaGAGGCTCAGGGATTGCCATGGAATCGTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: SILRFLVAVTRI*RLRDCHGIVVL
Trigger: GAGCACCACGATTCCATGGCAATCCCTGAGCCTGCAGATCCTGGTGACAGCCACCAGGAACCTCAGGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372027.10
ENST00000474994.2
ENST00000609457.5
ENST00000610081.5
CDS TCA 72 bp CATCTGAGAGCTGGGTGCAAAGGATGGGCTGCTTTCTaGTGGGTTAATCGAGACGAGGTTCCCAGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: HLRAGCKGWAAF*WVNRDEVPRGL
Trigger: GAGGCCCCTGGGAACCTCGTCTCGATTAACCCATCAGAAAGCAGCCCATCCTTTGCACCCAGCTCTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474994.2
CDS CCA 72 bp CAAAGACCGTTGCTGTGCTTCCACTCCCCTGCCCAGTaGTACAGACTGGAGTCCGATGGTGACCTCCAAACA +
Preference number: 6 (lower is better)
Translates to: QRPLLCFHSPAQ*YRLESDGDLQT
Trigger: TGTTTGGAGGTCACCATCGGACTCCAGTCTGTACCACTGGGCAGGGGAGTGGAAGCACAGCAACGGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372027.10
CDS CCA 72 bp CAAAGAGGTCAGCACCTTCTGCTTGACCTGGTACACTaGCTTGTGGGCCATGCGGTACCTTTAAGTCCCCAC +
Preference number: 6 (lower is better)
Translates to: QRGQHLLLDLVH*LVGHAVPLSPH
Trigger: GTGGGGACTTAAAGGTACCGCATGGCCCACAAGCCAGTGTACCAGGTCAAGCAGAAGGTGCTGACCTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609457.5
CDS GCA 72 bp CCAGGCTTCGTTAGGACTCCAGCTCCCTGTCAGTCCTaGCCATATCCCAGTCAGGAGACAATATCCAAACCA +
Preference number: 6 (lower is better)
Translates to: PGFVRTPAPCQS*PYPSQETISKP
Trigger: TGGTTTGGATATTGTCTCCTGACTGGGATATGGGCAGGACTGACAGGGAGCTGGAGTCCTAACGAAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474994.2
ENST00000609457.5
CDS TCA 72 bp GTCAGGTCCCTTCCTTCTGGGCTTCACTTTTCCATCTaGGAGCTGGGTGCAAAGGATGGGCTGCTTTCTGAT +
Preference number: 6 (lower is better)
Translates to: VRSLPSGLHFSI*ELGAKDGLLSD
Trigger: ATCAGAAAGCAGCCCATCCTTTGCACCCAGCTCTCAGATGGAAAAGTGAAGCCCAGAAGGAAGGGACCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474994.2
CDS CCA 72 bp AGGTTTCTTATGGCCTGGGTAAGGCTGTGCAGGCTTTaGTTAAAGCTCCTCCAGATGGGGCTGAAATGCACT +
Preference number: 6 (lower is better)
Translates to: RFLMAWVRLCRL*LKLLQMGLKCT
Trigger: AGTGCATTTCAGCCCCATCTGGAGGAGCTTTAACCAAAGCCTGCACAGCCTTACCCAGGCCATAAGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372027.10
ENST00000488950.1
ENST00000609457.5
ENST00000610081.5