RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMRN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000138722

Ensembl transcript IDs: ENST00000264790.7, ENST00000394980.5, ENST00000506328.1, ENST00000508372.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATaGCCTGATTCCAAATCCTGCCTCAGCCCTATGAGCTCATGGGCC +
Preference number: 1 (lower is better)
Translates to: GGNIEKGWMWALEKT*PDSKSCLSPMSSWA
Trigger: GGCCCATGAGCTCATAGGGCTGAGGCAGGATTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
3UTR-3UTR CCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAGCCCTATGAGCTCATaGGCCTTGGTCTCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: STSVGGNIEKGWMWALEKSPMSS*ALVSVS
Trigger: AGACACAGAGACCAAGGCCCATGAGCTCATAGGGCT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
3UTR GCA 72 bp TGGGCTCTGGAGAAGACATGGCCTGATTCCAAATCCTaGCTCAGCCCTATGAGCTCATGGGCCTTGGTCTCT +
Preference number: 3 (lower is better)
Translates to: WALEKTWPDSKS*LSPMSSWALVS
Trigger: AGAGACCAAGGCCCATGAGCTCATAGGGCTGAGGCAGGATTTGGAATCAGGCCATGTCTTCTCCAGAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
3UTR CCA 72 bp ATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATaGCCTGATTCCAAATCCTGCCTCAGCCCTATGAGC +
Preference number: 3 (lower is better)
Translates to: IEKGWMWALEKT*PDSKSCLSPMS
Trigger: GCTCATAGGGCTGAGGCAGGATTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
3UTR CCA 72 bp ACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTaGGCTCTGGAGAAGACATGGCCTGATTCCAAATCC +
Preference number: 3 (lower is better)
Translates to: TSVGGNIEKGWM*ALEKTWPDSKS
Trigger: GGATTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
3UTR CCA 72 bp TTTAGCACATCTGTGGGAGGCAATATAGAGAAAGGATaGATGTGGGCTCTGGAGAAGACATGGCCTGATTCC +
Preference number: 3 (lower is better)
Translates to: FSTSVGGNIEKG*MWALEKTWPDS
Trigger: GGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGGGTCACCACAGCCTTaGTGCTGCTGCTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKGSPQP*CCCCSA
Trigger: AGCTGAGCAGCAGCAGCAGCAAGGCTGTGGTGACCC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCCTTGCTGCTGCTGCTaGTCAGCTACTCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKPCCCC*SATPLP
Trigger: TGGCAGAGGAGTAGCTGAGCAGCAGCAGCAGCAAGG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCCACAGCCTTGCTGCTaGTGCTGCTCAGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKPQPCC*CCSATP
Trigger: AGGAGTAGCTGAGCAGCAGCAGCAGCAAGGCTGTGG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGTCACCACAGCCTTGCTaGTGCTGCTGCTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKSPQPC*CCCSAT
Trigger: AGTAGCTGAGCAGCAGCAGCAGCAAGGCTGTGGTGA...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAGTCAGTTCTTTGGCTaGAACTGCTGTCACCCCGGC +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKSQFFG*NCCHPG
Trigger: GCCGGGGTGACAGCAGTTCCAGCCAAAGAACTGACT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCTGCCAACAGCTGTATaGCTTTCAGCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKLPTAV*LSAWLV
Trigger: CACCAACCAGGCTGAAAGTCATACAGCTGTTGGCAG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAACCACAGCCTTGCTGCTaGTGCTGCTCAGCTACTCCT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKPQPCC*CCSATP
Trigger: AGGAGTAGCTGAGCAGCAGCAGCAGCAAGGCTGTGG...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGATCTCTGGGAATACCTaGAAGGGTCTTGGCGACTTG +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKISGNT*KGLGDL
Trigger: CAAGTCGCCAAGACCCTTGCAGGTATTCCCAGAGAT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGAGGTATGTTTCCCGTaGGGCTCGATTTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKEVCFP*GSISHA
Trigger: GGCGTGGGAAATCGAGCCCCACGGGAAACATACCTC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAGGTCCTTTCCCACCTaGGACATAAGTGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKRSFPT*DISDLV
Trigger: AACCAGGTCACTTATGTCCCAGGTGGGAAAGGACCT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAACACGTGCCCCCATTTTaGCACGGATGCCGACTACAG +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKHVPPF*HGCRLQ
Trigger: CTGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTG...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATTGCTGTCACCCCGGCTaGGGTATGTTTCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHCCHPG*GMFPVG
Trigger: CCCCACGGGAAACATACCTCAGCCGGGGTGACAGCA...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCACCTGGGACATAAGTaGCCTGGTTGTCCAATATCA +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKHLGHK*PGCPIS
Trigger: TGATATTGGACAACCAGGTCACTTATGTCCCAGGTG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGTCTGTAGGGTTTTTGTaGTCTGTGACCTCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKSVGFL*SVTSSG
Trigger: CCCACTAGAGGTCACAGATCACAAAAACCCTACAGA...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCTTGACCACTCCTTCTaGTTTCTCTGTGGATGTGAG +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKLDHSF*FLCGCE
Trigger: CTCACATCCACAGAGAAAGCAGAAGGAGTGGTCAAG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGCTCAGCTACTCCTCTaGCAACAGCTGTATGACTTT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKAQLLL*QQLYDF
Trigger: AAAGTCATACAGCTGTTGGCAGAGGAGTAGCTGAGC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAATCACCACAGCCTTGCTaGTGCTGCTGCTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKSPQPC*CCCSAT
Trigger: AGTAGCTGAGCAGCAGCAGCAGCAAGGCTGTGGTGA...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGATTGGAAAGGACCACTaGTTCTGCTCCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKIGKDH*FCSRIE
Trigger: TTCAATCCTGGAGCAGAATCAGTGGTCCTTTCCAAT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAACTGCCAACAGCTGTATaGCTTTCAGCCTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKLPTAV*LSAWLV
Trigger: CACCAACCAGGCTGAAAGTCATACAGCTGTTGGCAG...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGACTTGATACAGTCTTaGAGAGCTGTGCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKDLIQS*RAVLQS
Trigger: AGACTGTAGCACAGCTCTTCAAGACTGTATCAAGTC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCTTCACATTCACCTCTaGGAGACTCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKLHIHL*ETLSPS
Trigger: AGATGGAGAAAGAGTCTCTCAGAGGTGAATGTGAAG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGGAGAAGACATGGCCTaGTTCCAAATCCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKGEDMA*FQILPQ
Trigger: CTGAGGCAGGATTTGGAATCAGGCCATGTCTTCTCC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCATGACCCGAGTGGTTaGCAGTATTTGCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKHDPSG*QYLQTL
Trigger: CAAAGTTTGCAAATACTGCCAACCACTCGGGTCATG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGTACCTGCAAGGGTCTTaGCGACTTGCAAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKYLQGS*RLAKQS
Trigger: ACTTTGTTTTGCAAGTCGCCAAGACCCTTGCAGGTA...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAAGCCCTATGAGCTCATaGGCCTTGGTCTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKSPMSS*ALVSVS
Trigger: AGACACAGAGACCAAGGCCCATGAGCTCATAGGGCT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATCTATCTCCGCCGACATaGCCCGAGTGGTTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHLSPPT*PEWLAV
Trigger: TACTGCCAACCACTCGGGTCATGTCGGCGGAGATAG...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATGCTGTCACCCCGGCTaGGGTATGTTTCCCGTGGGG +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKCCHPG*GMFPVG
Trigger: CCCCACGGGAAACATACCTCAGCCGGGGTGACAGCA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAACATTGTCTGTCTGAGTaGTGCTCCCTGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKHCLSE*CSLLKQ
Trigger: TTGCTTGAGCAGGGAGCATCACTCAGACAGACAATG...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGTCTTCAGAAGTTCTTaGCTCTGGAGTTGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKVFRSS*LWSCSY
Trigger: ATAGCTACAACTCCAGAGGCAAGAACTTCTGAAGAC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGAATTATTTGCCTGGTaGTTTCGAGGTCCTCTGATA +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKELFAW*FRGPLI
Trigger: TATCAGAGGACCTCGAAAGCACCAGGCAAATAATTC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGTTAGTTTCTCATCTCTaGGAATACCTGCAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKLVSHL*EYLQGS
Trigger: AGACCCTTGCAGGTATTCCCAGAGATGAGAAACTAA...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGCTCTGGAGAAGACATaGCCTGATTCCAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKALEKT*PDSKSC
Trigger: GCAGGATTTGGAATCAGGCCATGTCTTCTCCAGAGC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGTGGATGTGAGAGTTTaGTTTCTCACACCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKVDVRV*FLTPSA
Trigger: TGCTGAGGGTGTGAGAAATCAAACTCTCACATCCAC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGATTTTACTTGCTTCTaGGACTTGACAACATTTGCC +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKDFTCF*DLTTFA
Trigger: GGCAAATGTTGTCAAGTCTCAGAAGCAAGTAAAATC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGCTCAGCTACTCCTCTaGCAACAGCTGTATGACTTT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKAQLLL*QQLYDF
Trigger: AAAGTCATACAGCTGTTGGCAGAGGAGTAGCTGAGC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGGGTCACCACAGCCTTaGTGCTGCTGCTGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKGSPQP*CCCCSA
Trigger: AGCTGAGCAGCAGCAGCAGCAAGGCTGTGGTGACCC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAAATGCCACCATGGGTaGATATCTGTAAGATCCTTT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKKCHHG*ISVRSF
Trigger: AAAGGATCTTACAGATATGCACCCATGGTGGCATTT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAAGAAGTTCTTGCCTCTaGAGTTGTAGCTATCTCCGC +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKRSSCL*SCSYLR
Trigger: GCGGAGATAGCTACAACTCCAGAGGCAAGAACTTCT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAACTATCTCCGCCGACATaGCCCGAGTGGTTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKLSPPT*PEWLAV
Trigger: TACTGCCAACCACTCGGGTCATGTCGGCGGAGATAG...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAACTTGCTTCTGAGACTTaGCAACATTTGCCAGACTAC +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKLASET*QHLPDY
Trigger: GTAGTCTGGCAAATGTTGTCAAGTCTCAGAAGCAAG...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAACCTTGCTGCTGCTGCTaGTCAGCTACTCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKPCCCC*SATPLP
Trigger: TGGCAGAGGAGTAGCTGAGCAGCAGCAGCAGCAAGG...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAAGTCTTGAAGAGCTGTaGTACAGTCTCTTGCATGTC +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKSLEEL*YSLLHV
Trigger: GACATGCAAGAGACTGTAGCACAGCTCTTCAAGACT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGAGGTATGTTTCCCGTaGGGCTCGATTTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKEVCFP*GSISHA
Trigger: GGCGTGGGAAATCGAGCCCCACGGGAAACATACCTC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGTCCTATAGACAGGATTaGATATCTTCTGAGATCTCT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKSYRQD*ISSEIS
Trigger: AGAGATCTCAGAAGATATCCAATCCTGTCTATAGGA...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAAAACAAACTTTTGCTaGGCTGCTATTGAAACCACA +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKKTNFC*AAIETT
Trigger: TGTGGTTTCAATAGCAGCCCAGCAAAAGTTTGTTTT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACACGTGCCCCCATTTTaGCACGGATGCCGACTACAG +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRHVPPF*HGCRLQ
Trigger: CTGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTG...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAATTGCTGGGCTGCTATTaGAACCACAGATTCATTAAC +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKLLGCY*NHRFIN
Trigger: GTTAATGAATCTGTGGTTTCAATAGCAGCCCAGCAA...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGGTAGCATTCAGTTCTaGCACACTTGTAGAAGCATT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKGSIQF*HTCRSI
Trigger: AATGCTTCTACAAGTGTGTCAGAACTGAATGCTACC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATTTGTCCGTGTTTCTTTaGGTCCGGCCTATCAGGACT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHLSVFL*VRPIRT
Trigger: AGTCCTGATAGGCCGGACTCAAAGAAACACGGACAA...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAATGCCGACTACAGCTTaGATACTCCTCAGGATATAT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKMPTTA*ILLRIY
Trigger: ATATATCCTGAGGAGTATTCAAGCTGTAGTCGGCAT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGCTCTATGGAAGTGCTaGAGGGTCTCTGACAAAGCT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHALWKC*RVSDKA
Trigger: AGCTTTGTCAGAGACCCTTCAGCACTTCCATAGAGC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394980.5
CDS-3UTR GCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGTGTGTATCAAACTTTaGTGTTCCTGGGCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKVCIKL*CSWALS
Trigger: ACTAAGAGCCCAGGAACAGCAAAGTTTGATACACAC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAAAGAGTCAGTTTCATTaGCTGGTAGTTCACCTGATC +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKKSQFH*LVVHLI
Trigger: GATCAGGTGAACTACCAGGCAATGAAACTGACTCTT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAAATCTTCAAACATTTaGAGCATCATCAAACTCTGC +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKKSSNI*SIIKLC
Trigger: GCAGAGTTTGATGATGCTGCAAATGTTTGAAGATTT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATATCTCTGGGAATACCTaGAAGGGTCTTGGCGACTTG +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHISGNT*KGLGDL
Trigger: CAAGTCGCCAAGACCCTTGCAGGTATTCCCAGAGAT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAAGATGGATAGATTTTaGTTCCAACGCCTTAAATCT +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKKMDRF*FQRLKS
Trigger: AGATTTAAGGCGTTGGAAGCAAAATCTATCCATCTT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCGTTGGTTTCTTAAGTaGGTTAATTTTCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKRWFLK*VNFLWQ
Trigger: TTGCCAAAGAAAATTAACGCACTTAAGAAACCAACG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAAGAAGTTGAATATCTaGCAGGGAATGTTTTATCCA +
Preference number: 4 (lower is better)
Translates to: STSVGGNIEKGWMWALEKKKLNI*QGMFYP
Trigger: TGGATAAAACATTCCCTGCCAGATATTCAACTTCTT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGCTCTGGAGAAGACATaGCCTGATTCCAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHALEKT*PDSKSC
Trigger: GCAGGATTTGGAATCAGGCCATGTCTTCTCCAGAGC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGATGGATGTGGGCTCTaGAGAAGACATGGCCTGATT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHDGCGL*RRHGLI
Trigger: AATCAGGCCATGTCTTCTCCAGAGCCCACATCCATC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGAGAAAGGATGGATGTaGGCTCTGGAGAAGACATGG +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHEKGWM*ALEKTW
Trigger: CCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAATTTATTTGGAGGAACTaGAGCAGAAGGCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKFIWRN*SRRHSL
Trigger: AAGACTATGCCTTCTGCTTCAGTTCCTCCAAATAAA...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAATCGGAGGTACATTTATaGTGGATCTCACTATTATCC +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKSEVHL*WISLLS
Trigger: GGATAATAGTGAGATCCATCATAAATGTACCTCCGA...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAAGTTCTTGGGGTATATaGAGCTCCATAATTGACATC +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKSSWGI*SSIIDI
Trigger: GATGTCAATTATGGAGCTTCATATACCCCAAGAACT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGGAGAAGACATGGCCTaGTTCCAAATCCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKGEDMA*FQILPQ
Trigger: CTGAGGCAGGATTTGGAATCAGGCCATGTCTTCTCC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGGTATAGTCCAAGAATaGTTACTGTTGTTAAGCCCA +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKGIVQE*LLLLSP
Trigger: TGGGCTTAACAACAGTAAGCATTCTTGGACTATACC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATCCATTTTGGCACGGATaGCGACTACAGCTTGAATAC +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHPFWHG*RLQLEY
Trigger: GTATTCAAGCTGTAGTCGGCATCCGTGCCAAAATGG...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGCTAAGACTGAGTTTTaGCAGTTTGAGATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKAKTEF*QFEMCR
Trigger: TCTACACATCTCAAACTGGCAAAACTCAGTCTTAGC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394980.5
CDS-3UTR CCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAGAAGTTCTTGCCTCTaGAGTTGTAGCTATCTCCGC +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHRSSCL*SCSYLR
Trigger: GCGGAGATAGCTACAACTCCAGAGGCAAGAACTTCT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATTTTTTGCATCACTTCTaGGTCACCACAGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHFLHHF*VTTALL
Trigger: CAGCAAGGCTGTGGTGACCCAGAAGTGATGCAAAAA...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAAGCCCTATGAGCTCATaGGCCTTGGTCTCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRSPMSS*ALVSVS
Trigger: AGACACAGAGACCAAGGCCCATGAGCTCATAGGGCT...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGAAGGCATAGTCTTCTaGGAGTTCCCATCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKREGIVF*EFPSSG
Trigger: ACCTGAGGATGGGAACTCTCAGAAGACTATGCCTTC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGAAGGCATAGTCTTCTaGGAGTTCCCATCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKEGIVF*EFPSSG
Trigger: ACCTGAGGATGGGAACTCTCAGAAGACTATGCCTTC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATCCTGGGCTCTTAGTTaGCATTTCGGCCCACTGTAT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKSWALS*HFGPLY
Trigger: ATACAGTGGGCCGAAATGTCAACTAAGAGCCCAGGA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATTGCTTTTATCTTCGCTaGCTTTTCCTTCTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHCFYLR*LFLLGR
Trigger: CCTCCCTAGAAGGAAAAGTCAGCGAAGATAAAAGCA...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGACTTGATACAGTCTTaGAGAGCTGTGCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHDLIQS*RAVLQS
Trigger: AGACTGTAGCACAGCTCTTCAAGACTGTATCAAGTC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGACATTATTGCTAACTaGCTCAGCAGCTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHDIIAN*LSSWSI
Trigger: AATGCTCCAGCTGCTGAGTCAGTTAGCAATAATGTC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACATTGTCTGTCTGAGTaGTGCTCCCTGCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRHCLSE*CSLLKQ
Trigger: TTGCTTGAGCAGGGAGCATCACTCAGACAGACAATG...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATTGTCCGTGTTTCTTTaGGTCCGGCCTATCAGGACT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKLSVFL*VRPIRT
Trigger: AGTCCTGATAGGCCGGACTCAAAGAAACACGGACAA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAACTCGATGGTGTACTTaGAAACATATACTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKTRWCT*KHILQD
Trigger: ATCTTGGAGTATATGTTTTCAAGTACACCATCGAGT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGGTTTTTGTGATCTGTaGCCTCTAGTGGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRGFCDL*PLVGWL
Trigger: GAGCCATCCCACTAGAGGTCACAGATCACAAAAACC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394980.5
CDS-3UTR GCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGGCCTTTTTGATAGCTaGTTCCACACTGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHGLFDS*FHTESA
Trigger: AGCAGATTCAGTGTGGAAGCAGCTATCAAAAAGGCC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAGTCTTGAAGAGCTGTaGTACAGTCTCTTGCATGTC +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHSLEEL*YSLLHV
Trigger: GACATGCAAGAGACTGTAGCACAGCTCTTCAAGACT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGGTCCTTTCCCACCTaGGACATAAGTGACCTGGTT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKRSFPT*DISDLV
Trigger: AACCAGGTCACTTATGTCCCAGGTGGGAAAGGACCT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAACATCTTATTGTCCATTaGAAAGAGAACTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKHLIVH*KENFSQ
Trigger: TTGGCTGAAGTTCTCTTTCCAATGGACAATAAGATG...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAATGGTATTTTCTCACTTaGGAAGTGGTTTCATTGAAC +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKWYFLT*EVVSLN
Trigger: GTTCAATGAAACCACTTCCCAAGTGAGAAAATACCA...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGATGGATGTGGGCTCTaGAGAAGACATGGCCTGATT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRDGCGL*RRHGLI
Trigger: AATCAGGCCATGTCTTCTCCAGAGCCCACATCCATC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGAGAAAGGATGGATGTaGGCTCTGGAGAAGACATGG +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKREKGWM*ALEKTW
Trigger: CCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATTTCATCTCAGTAGTTTaGAGCAAGGTAGCTCATGTG +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHFISVV*SKVAHV
Trigger: CACATGAGCTACCTTGCTTCAAACTACTGAGATGAA...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGTGGATGTGAGAGTTTaGTTTCTCACACCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRVDVRV*FLTPSA
Trigger: TGCTGAGGGTGTGAGAAATCAAACTCTCACATCCAC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGAATTATTTGCCTGGTaGTTTCGAGGTCCTCTGATA +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHELFAW*FRGPLI
Trigger: TATCAGAGGACCTCGAAAGCACCAGGCAAATAATTC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAATTAGACTCAATGTCTTaGAACCGAGTCTCAAAATTT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKLDSMS*NRVSKF
Trigger: AAATTTTGAGACTCGGTTGCAAGACATTGAGTCTAA...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAAAGATGGATAGATTTTaGTTCCAACGCCTTAAATCT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKKMDRF*FQRLKS
Trigger: AGATTTAAGGCGTTGGAAGCAAAATCTATCCATCTT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAACCATTTTGGCACGGATaGCGACTACAGCTTGAATAC +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKPFWHG*RLQLEY
Trigger: GTATTCAAGCTGTAGTCGGCATCCGTGCCAAAATGG...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATTCCATTTATGCACGTaGCCCCATTTTGGCACGGAT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRFHLCT*PHFGTD
Trigger: ATCCGTGCCAAAATGGGGGCACGTGCATAAATGGAA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGTTCATTTGACTTTCTaGCAAAGCTCTGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKVHLTF*QSSEEI
Trigger: AATTTCTTCAGAGCTTTGCCAGAAAGTCAAATGAAC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATTTTTGCATCACTTCTaGGTCACCACAGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKFLHHF*VTTALL
Trigger: CAGCAAGGCTGTGGTGACCCAGAAGTGATGCAAAAA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAAAGAAGTTGAATATCTaGCAGGGAATGTTTTATCCA +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKKKLNI*QGMFYP
Trigger: TGGATAAAACATTCCCTGCCAGATATTCAACTTCTT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGGTAAGATTTACCGTTaGTTTCTTAAGTGCGTTAAT +
Preference number: 4 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKGKIYR*FLKCVN
Trigger: ATTAACGCACTTAAGAAACCAACGGTAAATCTTACC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAATATAGAGAAAGGATaGATGTGGGCTCTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHNIEKG*MWALEK
Trigger: CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAATTGGAAAGGACCACTaGTTCTGCTCCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKIGKDH*FCSRIE
Trigger: TTCAATCCTGGAGCAGAATCAGTGGTCCTTTCCAAT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATGCTTTTATCTTCGCTaGCTTTTCCTTCTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKCFYLR*LFLLGR
Trigger: CCTCCCTAGAAGGAAAAGTCAGCGAAGATAAAAGCA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAGAGCACCTTCTAAATaGGTCTGCTTTACTTCTAGT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHRAPSK*VCFTSS
Trigger: ACTAGAAGTAAAGCAGACTCATTTAGAAGGTGCTCT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGACATTATTGCTAACTaGCTCAGCAGCTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRDIIAN*LSSWSI
Trigger: AATGCTCCAGCTGCTGAGTCAGTTAGCAATAATGTC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACTTCACATTCACCTCTaGGAGACTCTTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRLHIHL*ETLSPS
Trigger: AGATGGAGAAAGAGTCTCTCAGAGGTGAATGTGAAG...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATTCGGAGGTACATTTATaGTGGATCTCACTATTATCC +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHSEVHL*WISLLS
Trigger: GGATAATAGTGAGATCCATCATAAATGTACCTCCGA...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACTTGCTTCTGAGACTTaGCAACATTTGCCAGACTAC +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRLASET*QHLPDY
Trigger: GTAGTCTGGCAAATGTTGTCAAGTCTCAGAAGCAAG...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGTGCTGAAGGGTCTCTaGCAAAGCTTAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHVLKGL*QSLIFF
Trigger: AAAGAATATTAAGCTTTGTCAGAGACCCTTCAGCAC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGGCCTTTTTGATAGCTaGTTCCACACTGAATCTGCT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKGLFDS*FHTESA
Trigger: AGCAGATTCAGTGTGGAAGCAGCTATCAAAAAGGCC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACTTGACAACATTTaGCAGACTACCAGGCAACGA +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKRLDNI*QTTRQR
Trigger: TCGTTGCCTGGTAGTCTGGCAAATGTTGTCAAGTCT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAAGACTTGACAACATTTaGCAGACTACCAGGCAACGA +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRRLDNI*QTTRQR
Trigger: TCGTTGCCTGGTAGTCTGGCAAATGTTGTCAAGTCT...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAAATGCCACCATGGGTaGATATCTGTAAGATCCTTT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHKCHHG*ISVRSF
Trigger: AAAGGATCTTACAGATATGCACCCATGGTGGCATTT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACATGACCCGAGTGGTTaGCAGTATTTGCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRHDPSG*QYLQTL
Trigger: CAAAGTTTGCAAATACTGCCAACCACTCGGGTCATG...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAACTATATCAGTCAAAGTaGGCCGATTCTCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKLYQSK*ADSLAP
Trigger: TGGTGCAAGAGAATCGGCCCACTTTGACTGATATAG...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACTATATCAGTCAAAGTaGGCCGATTCTCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRLYQSK*ADSLAP
Trigger: TGGTGCAAGAGAATCGGCCCACTTTGACTGATATAG...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATACCTGCAAGGGTCTTaGCGACTTGCAAAACAAAGT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRYLQGS*RLAKQS
Trigger: ACTTTGTTTTGCAAGTCGCCAAGACCCTTGCAGGTA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATTCATCTCAGTAGTTTaGAGCAAGGTAGCTCATGTG +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRFISVV*SKVAHV
Trigger: CACATGAGCTACCTTGCTTCAAACTACTGAGATGAA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAAGTTGCTTGTTCATTTaGCTTTCTGGCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRSCLFI*LSGKAL
Trigger: CAGAGCTTTGCCAGAAAGTCAAATGAACAAGCAACT...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGCACCTCCAATCCAATaGGGTGACAATTTTATGTTG +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKAPPIQ*GDNFML
Trigger: CAACATAAAATTGTCACCTCATTGGATTGGAGGTGC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATTGCTGGGCTGCTATTaGAACCACAGATTCATTAAC +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRLLGCY*NHRFIN
Trigger: GTTAATGAATCTGTGGTTTCAATAGCAGCCCAGCAA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATCTAAGGCATATTCATTaGTACGTCTTTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHLRHIH*YVFLRH
Trigger: ATGCCTTAGAAAGACGTATCAATGAATATGCCTTAG...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAATATGAGCACTAAATaGCTCGATGGTGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHNMSTK*LDGVLE
Trigger: TTCAAGTACACCATCGAGTCATTTAGTGCTCATATT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGTGTGTATCAAACTTTaGTGTTCCTGGGCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRVCIKL*CSWALS
Trigger: ACTAAGAGCCCAGGAACAGCAAAGTTTGATACACAC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGACTTTCAGCCTGGTTaGTGTGTATCAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRDFQPG*CVSNFA
Trigger: AGCAAAGTTTGATACACACCAACCAGGCTGAAAGTC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGACTTTCAGCCTGGTTaGTGTGTATCAAACTTTGCT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKDFQPG*CVSNFA
Trigger: AGCAAAGTTTGATACACACCAACCAGGCTGAAAGTC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATTTGAATTATTTGCCTaGTGCTTTCGAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKFELFA*CFRGPL
Trigger: CAGAGGACCTCGAAAGCACCAGGCAAATAATTCAAA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATTTGAATTATTTGCCTaGTGCTTTCGAGGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRFELFA*CFRGPL
Trigger: CAGAGGACCTCGAAAGCACCAGGCAAATAATTCAAA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAAAACAAACTTTTGCTaGGCTGCTATTGAAACCACA +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHKTNFC*AAIETT
Trigger: TGTGGTTTCAATAGCAGCCCAGCAAAAGTTTGTTTT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATTAGTTTCTCATCTCTaGGAATACCTGCAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRLVSHL*EYLQGS
Trigger: AGACCCTTGCAGGTATTCCCAGAGATGAGAAACTAA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATCCAATCCAATGAGGTaGCAATTTTATGTTGCATCC +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKSNPMR*QFYVAS
Trigger: GGATGCAACATAAAATTGTCACCTCATTGGATTGGA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGCACCTTCTAAATaGGTCTGCTTTACTTCTAGT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKRAPSK*VCFTSS
Trigger: ACTAGAAGTAAAGCAGACTCATTTAGAAGGTGCTCT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATCATTGACCAAAGTCTaGATAGAATCATTCAGACGG +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKSLTKV*IESFRR
Trigger: CCGTCTGAATGATTCTATTCAGACTTTGGTCAATGA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGATTTTACTTGCTTCTaGGACTTGACAACATTTGCC +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKDFTCF*DLTTFA
Trigger: GGCAAATGTTGTCAAGTCTCAGAAGCAAGTAAAATC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAAGTTCTTGGGGTATATaGAGCTCCATAATTGACATC +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRSSWGI*SSIIDI
Trigger: GATGTCAATTATGGAGCTTCATATACCCCAAGAACT...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGGTATAGTCCAAGAATaGTTACTGTTGTTAAGCCCA +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRGIVQE*LLLLSP
Trigger: TGGGCTTAACAACAGTAAGCATTCTTGGACTATACC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATTCAGTTGATAAAAGCTaGTCATGTACTTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHSVDKS*SCTSFN
Trigger: ATTGAAGGAAGTACATGAGCAGCTTTTATCAACTGA...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAAATCTTCAAACATTTaGAGCATCATCAAACTCTGC +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHKSSNI*SIIKLC
Trigger: GCAGAGTTTGATGATGCTGCAAATGTTTGAAGATTT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATGTCCAATATCACTGTaGGAGATAACCTGGTATGTA +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKCPISL*EITWYV
Trigger: TACATACCAGGTTATCTCCCACAGTGATATTGGACA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATCACTATTGCTTCCTTTaGTTGTTCATATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHHYCFL*LFICHC
Trigger: ACAATGACATATGAACAACCAAAGGAAGCAATAGTG...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAACTAAGGCATATTCATTaGTACGTCTTTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKLRHIH*YVFLRH
Trigger: ATGCCTTAGAAAGACGTATCAATGAATATGCCTTAG...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATTCAGACGGTGGAACTaGGGAATAAATGTCAAAATA +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRFRRWN*GINVKI
Trigger: TATTTTGACATTTATTCCTCAGTTCCACCGTCTGAA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACTTGTAGAAGCATTGTaGCACATTGTTAAAACTTCG +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRLVEAL*HIVKTS
Trigger: CGAAGTTTTAACAATGTGTCACAATGCTTCTACAAG...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAACTTGTAGAAGCATTGTaGCACATTGTTAAAACTTCG +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKLVEAL*HIVKTS
Trigger: CGAAGTTTTAACAATGTGTCACAATGCTTCTACAAG...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAACTCGATGGTGTACTTaGAAACATATACTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKTRWCT*KHILQD
Trigger: ATCTTGGAGTATATGTTTTCAAGTACACCATCGAGT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR TCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAATATGAGCACTAAATaGCTCGATGGTGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKNMSTK*LDGVLE
Trigger: TTCAAGTACACCATCGAGTCATTTAGTGCTCATATT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATCCTATAGACAGGATTaGATATCTTCTGAGATCTCT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRSYRQD*ISSEIS
Trigger: AGAGATCTCAGAAGATATCCAATCCTGTCTATAGGA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATGGTATTTTCTCACTTaGGAAGTGGTTTCATTGAAC +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRWYFLT*EVVSLN
Trigger: GTTCAATGAAACCACTTCCCAAGTGAGAAAATACCA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATCAGTTGATAAAAGCTaGTCATGTACTTCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRSVDKS*SCTSFN
Trigger: ATTGAAGGAAGTACATGAGCAGCTTTTATCAACTGA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATTAGACTCAATGTCTTaGAACCGAGTCTCAAAATTT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKLDSMS*NRVSKF
Trigger: AAATTTTGAGACTCGGTTGCAAGACATTGAGTCTAA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACGTTGGTTTCTTAAGTaGGTTAATTTTCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRRWFLK*VNFLWQ
Trigger: TTGCCAAAGAAAATTAACGCACTTAAGAAACCAACG...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR GCA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAATTTTCAGACTCAAATaGAAGCTTGTCTATTCCATC +
Preference number: 4 (lower is better)
Translates to: EEGQICRYYHRRILIRKRIFRLK*KLVYSI
Trigger: GATGGAATAGACAAGCTTGCATTTGAGTCTGAAAAT...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CCA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAACACTATTGCTTCCTTTaGTTGTTCATATGTCATTGT +
Preference number: 4 (lower is better)
Translates to: EEEGQICRYYHRRILIRKHYCFL*LFICHC
Trigger: ACAATGACATATGAACAACCAAAGGAAGCAATAGTG...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CCA 90 bp TCTTTGGCTGGAACTGCTGTCACCCCGGCTGAGGTATGTTTCCCGTaGGGCTCGATTTCCCACGCCTCCAGTGCCTCCAACGCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: SLAGTAVTPAEVCFP*GSISHASSASNASN
Trigger: ATTGGAGGCGTTGGAGGCACTGGAGGCGTGGGAAATCGAGCCCCACGGGAAACATACCTCAGCCGGGGTGACAGCAGTTCCAGCCAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS GCA 90 bp GTGGGGCTCGATTTCCCACGCCTCCAGTGCCTCCAACGCCTCCAATaGCTCCAGTGCCTCCAACTGTGTTTAGAGAAGTTGCTTGTTCAT +
Preference number: 5 (lower is better)
Translates to: VGLDFPRLQCLQRLQ*LQCLQLCLEKLLVH
Trigger: ATGAACAAGCAACTTCTCTAAACACAGTTGGAGGCACTGGAGGCATTGGAGGCGTTGGAGGCACTGGAGGCGTGGGAAATCGAGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS GCA 90 bp CTGGGTCACCACAGCCTTGCTGCTGCTGCTGCTCAGCTACTCCTCTaGCAACAGCTGTATGACTTTCAGCCTGGTTGGTGTGTATCAAAC +
Preference number: 5 (lower is better)
Translates to: LGHHSLAAAAAQLLL*QQLYDFQPGWCVSN
Trigger: GTTTGATACACACCAACCAGGCTGAAAGTCATACAGCTGTTGGCAGAGGAGTAGCTGAGCAGCAGCAGCAGCAAGGCTGTGGTGACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGCACGTGCCCCCATTTaGGCACGGATGCCGACTACA +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKARAPI*ARMPTT
Trigger: TGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTGC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCCTCAGCAGGTGCACTaGTTTCTGAGGGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKPQQVH*FLREAV
Trigger: CACTGCCTCCCTCAGAAACAAGTGCACCTGCTGAGG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 90 bp ATCCACCGGTCCAGCCACAAGGTCCTTTCCCACCTGGGACATAAGTaGCCTGGTTGTCCAATATCACTGTGGGAGATAACCTGGTATGTA +
Preference number: 5 (lower is better)
Translates to: IHRSSHKVLSHLGHK*PGCPISLWEITWYV
Trigger: TACATACCAGGTTATCTCCCACAGTGATATTGGACAACCAGGTCACTTATGTCCCAGGTGGGAAAGGACCTTGTGGCTGGACCGGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAACCTCAGCAGGTGCACTaGTTTCTGAGGGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKPQQVH*FLREAV
Trigger: CACTGCCTCCCTCAGAAACAAGTGCACCTGCTGAGG...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGTTGGTAGTCAGTTCTTaGGCTGGAACTGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKLVVSS*AGTAVT
Trigger: GGTGACAGCAGTTCCAGCCAAAGAACTGACTACCAA...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 90 bp TGTAACTTGACCACTCCTTCTGCTTTCTCTGTGGATGTGAGAGTTTaGTTTCTCACACCCTCAGCAGGTGCACTTGTTTCTGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: CNLTTPSAFSVDVRV*FLTPSAGALVSEGG
Trigger: GCCTCCCTCAGAAACAAGTGCACCTGCTGAGGGTGTGAGAAATCAAACTCTCACATCCACAGAGAAAGCAGAAGGAGTGGTCAAGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CCA 90 bp GCACAGGTAAAGCTAGTTCTTCCATTTATGCACGTGCCCCCATTTTaGCACGGATGCCGACTACAGCTTGAATACTCCTCTGTTACGGAA +
Preference number: 5 (lower is better)
Translates to: AQVKLVLPFMHVPPF*HGCRLQLEYSSVTE
Trigger: TTCCGTAACAGAGGAGTATTCAAGCTGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTGCATAAATGGAAGAACTAGCTTTACCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506328.1
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAACTTGATGCTAGCGTaGGTTGGGAGGGTAAGATTC +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKNLMLA*VGRVRF
Trigger: GAATCTTACCCTCCCAACCAACGCTAGCATCAAGTT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGATTCTGCTCCAGGATaGAACTTGATGCTAGCGTTG +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKDSAPG*NLMLAL
Trigger: CAACGCTAGCATCAAGTTCAATCCTGGAGCAGAATC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CCA 90 bp GCTCAGCTACTCCTCTGCCAACAGCTGTATGACTTTCAGCCTGGTTaGTGTGTATCAAACTTTGCTGTTCCTGGGCTCTTAGTTGACATT +
Preference number: 5 (lower is better)
Translates to: AQLLLCQQLYDFQPG*CVSNFAVPGLLVDI
Trigger: AATGTCAACTAAGAGCCCAGGAACAGCAAAGTTTGATACACACCAACCAGGCTGAAAGTCATACAGCTGTTGGCAGAGGAGTAGCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGCTCCAGGATTGAACTaGATGCTAGCGTTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKAPGLN*MLALVG
Trigger: CCCAACCAACGCTAGCATCAAGTTCAATCCTGGAGC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCTGCTCAAGCAAGGGTaGAAGGATCTCCATATCATA +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKLLKQG*KDLHII
Trigger: TATGATATGGAGATCCTTCAACCCTTGCTTGAGCAG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGATGCCGACTACAGCTaGAATACTCCTCAGGATATA +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKDADYS*NTPQDI
Trigger: TATATCCTGAGGAGTATTCAAGCTGTAGTCGGCATC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CCA 90 bp GCACAGGTAAAGCTAGTTCTTCCATTTATGCACGTGCCCCCATTTTaGCACGGATGCCGACTACAGCTTGAATACTCCTCAGGATATATT +
Preference number: 5 (lower is better)
Translates to: AQVKLVLPFMHVPPF*HGCRLQLEYSSGYI
Trigger: AATATATCCTGAGGAGTATTCAAGCTGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTGCATAAATGGAAGAACTAGCTTTACCTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCTTCATCTCAGTAGTTaGAAGCAAGGTAGCTCATGT +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKLHLSS*KQGSSC
Trigger: ACATGAGCTACCTTGCTTCAAACTACTGAGATGAAG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGTAAGATTCTGTAACTaGACCACTCCTTCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKVRFCN*TTPSAF
Trigger: GAAAGCAGAAGGAGTGGTCAAGTTACAGAATCTTAC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGTACTCAGTGACATTATaGCTAACTGACTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKYSVTL*LTDSAA
Trigger: AGCTGCTGAGTCAGTTAGCAATAATGTCACTGAGTA...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAGCTTGATAGTGCAGTaGTCACCAGTAAAAGGATGT +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKSLIVQ*SPVKGC
Trigger: ACATCCTTTTACTGGTGACAACTGCACTATCAAGCT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGCTGGAATTGTTCCTTTaGCAAGTCGTAACCAGACTT +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKLELFL*QVVTRL
Trigger: AAGTCTGGTTACGACTTGCAAAAGGAACAATTCCAG...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGAAACTTGGCTGGAATaGTTCCTTTTGCAAGTCGTA +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKETWLE*FLLQVV
Trigger: TACGACTTGCAAAAGGAACAATTCCAGCCAAGTTTC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS GCA 90 bp AAGCTAGTTCTTCCATTTATGCACGTGCCCCCATTTTGGCACGGATaGCGACTACAGCTTGAATACTCCTCAGGATATATTATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: KLVLPFMHVPPFWHG*RLQLEYSSGYIMLS
Trigger: GGACAACATAATATATCCTGAGGAGTATTCAAGCTGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTGCATAAATGGAAGAACTAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGATTCTGCTCCAGGATaGAACTTGATGCTAGCGTTG +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKDSAPG*NLMLAL
Trigger: CAACGCTAGCATCAAGTTCAATCCTGGAGCAGAATC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAAGTTGCTTGTTCATTaGACTTTCTGGCAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKKLLVH*TFWQSS
Trigger: AGAGCTTTGCCAGAAAGTCAAATGAACAAGCAACTT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGAAGGGTCTTGGCGACTaGCAAAACAAAGTTATATCT +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKKGLGD*QNKVIS
Trigger: AGATATAACTTTGTTTTGCAAGTCGCCAAGACCCTT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAATACCTGCAAGGGTCTaGGCGACTTGCAAAACAAAG +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKIPARV*ATCKTK
Trigger: CTTTGTTTTGCAAGTCGCCAAGACCCTTGCAGGTAT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGCACGTGCCCCCATTTaGGCACGGATGCCGACTACA +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKARAPI*ARMPTT
Trigger: TGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTGC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGGACTCGATGGTGTACTaGAAAACATATACTCCAAGA +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKDSMVY*KTYTPR
Trigger: TCTTGGAGTATATGTTTTCAAGTACACCATCGAGTC...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAAGTGGGCCGATTCTCTaGCACCAAAACAAACTTTTG +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKSGPIL*HQNKLL
Trigger: CAAAAGTTTGTTTTGGTGCAAGAGAATCGGCCCACT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGTTTAGACTCAATGTCTaGCAACCGAGTCTCAAAATT +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKFRLNV*QPSLKI
Trigger: AATTTTGAGACTCGGTTGCAAGACATTGAGTCTAAA...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AGCACATCTGTGGGAGGCAATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACTTCGTGGAGAGTTTaGTTAAGCGAAAAGAAGTTA +
Preference number: 5 (lower is better)
Translates to: STSVGGNIEKGWMWALEKTSWRV*LSEKKL
Trigger: TAACTTCTTTTCGCTTAACAAAACTCTCCACGAAGT...CTTCTCCAGAGCCCACATCCATCCTTTCTCTATATTGCCTCCCACAGATGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGATGCCGACTACAGCTaGAATACTCCTCAGGATATA +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKDADYS*NTPQDI
Trigger: TATATCCTGAGGAGTATTCAAGCTGTAGTCGGCATC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGTAACAGGGGGAAACTaGGCTGGAATTGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKVTGGN*AGIVPF
Trigger: AAAAGGAACAATTCCAGCCAAGTTTCCCCCTGTTAC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 90 bp TTGACATTTCGGCCCACTGTATCCAGGACAGCACCTCCAATCCAATaGGGTGACAATTTTATGTTGCATCCTATAGACAGGATTGGATAT +
Preference number: 5 (lower is better)
Translates to: LTFRPTVSRTAPPIQ*GDNFMLHPIDRIGY
Trigger: ATATCCAATCCTGTCTATAGGATGCAACATAAAATTGTCACCTCATTGGATTGGAGGTGCTGTCCTGGATACAGTGGGCCGAAATGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS TCA 90 bp CACTATTGCTTCCTTTGGTTGTTCATATGTCATTGTCTGTCTGAGTaGTGCTCCCTGCTCAAGCAAGGGTTGAAGGATCTCCATATCATA +
Preference number: 5 (lower is better)
Translates to: HYCFLWLFICHCLSE*CSLLKQGLKDLHII
Trigger: TATGATATGGAGATCCTTCAACCCTTGCTTGAGCAGGGAGCATCACTCAGACAGACAATGACATATGAACAACCAAAGGAAGCAATAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS TCA 90 bp CAGCTTGAATACTCCTCAGGATATATTATGTTGTCCGTGTTTCTTTaGGTCCGGCCTATCAGGACTGTGGTAAGATTTACCGTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: QLEYSSGYIMLSVFL*VRPIRTVVRFTVGF
Trigger: GAAACCAACGGTAAATCTTACCACAGTCCTGATAGGCCGGACTCAAAGAAACACGGACAACATAATATATCCTGAGGAGTATTCAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CCA 90 bp TCAGTGACATTATTGCTAACTGACTCAGCAGCTGGAGCATTCTTCTaGTCTGATACCTGTTCAGTTGATAAAAGCTGCTCATGTACTTCC +
Preference number: 5 (lower is better)
Translates to: SVTLLLTDSAAGAFF*SDTCSVDKSCSCTS
Trigger: GGAAGTACATGAGCAGCTTTTATCAACTGAACAGGTATCAGACCAGAAGAATGCTCCAGCTGCTGAGTCAGTTAGCAATAATGTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAATACTCAGTGACATTATaGCTAACTGACTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKYSVTL*LTDSAA
Trigger: AGCTGCTGAGTCAGTTAGCAATAATGTCACTGAGTA...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAACCATCTTATTGTCCATaGGAAAGAGAACTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKPSYCP*ERELQP
Trigger: TGGCTGAAGTTCTCTTTCCAATGGACAATAAGATGG...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAAGCTTGATAGTGCAGTaGTCACCAGTAAAAGGATGT +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKSLIVQ*SPVKGC
Trigger: ACATCCTTTTACTGGTGACAACTGCACTATCAAGCT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGACTCAAATGCAAGCTaGTCTATTCCATCAACCACT +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKDSNAS*SIPSTT
Trigger: AGTGGTTGATGGAATAGACAAGCTTGCATTTGAGTC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAGAAACTTGGCTGGAATaGTTCCTTTTGCAAGTCGTA +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKETWLE*FLLQVV
Trigger: TACGACTTGCAAAAGGAACAATTCCAGCCAAGTTTC...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 90 bp TTATCACTATTGCTTCCTTTGGTTGTTCATATGTCATTGTCTGTCTaGGTGATGCTCCCTGCTCAAGCAAGGGTTGAAGGATCTCCATAT +
Preference number: 5 (lower is better)
Translates to: LSLLLPLVVHMSLSV*VMLPAQARVEGSPY
Trigger: ATATGGAGATCCTTCAACCCTTGCTTGAGCAGGGAGCATCACTCAGACAGACAATGACATATGAACAACCAAAGGAAGCAATAGTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS-3UTR CAA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAACTTGATGCTAGCGTaGGTTGGGAGGGTAAGATTC +
Preference number: 5 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHNLMLA*VGRVRF
Trigger: GAATCTTACCCTCCCAACCAACGCTAGCATCAAGTT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGCTCCAGGATTGAACTaGATGCTAGCGTTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRAPGLN*MLALVG
Trigger: CCCAACCAACGCTAGCATCAAGTTCAATCCTGGAGC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAACTGATACCTGTTCAGTaGATAAAAGCTGCTCATGTA +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKLIPVQ*IKAAHV
Trigger: TACATGAGCAGCTTTTATCAACTGAACAGGTATCAG...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAAAGCATTGTGACACATaGTTAAAACTTCGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKKHCDT*LKLRGE
Trigger: CTCTCCACGAAGTTTTAACAATGTGTCACAATGCTT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGTTGTCCGTGTTTCTTaGAGTCCGGCCTATCAGGAC +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKVVRVS*SPAYQD
Trigger: GTCCTGATAGGCCGGACTCAAAGAAACACGGACAAC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGTTGTCCGTGTTTCTTaGAGTCCGGCCTATCAGGAC +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRVVRVS*SPAYQD
Trigger: GTCCTGATAGGCCGGACTCAAAGAAACACGGACAAC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 90 bp TTTGCCTGGTGCTTTCGAGGTCCTCTGATAGACTTGATACAGTCTTaGAGAGCTGTGCTACAGTCTCTTGCATGTCATTTTGAAAAATTT +
Preference number: 5 (lower is better)
Translates to: FAWCFRGPLIDLIQS*RAVLQSLACHFEKF
Trigger: AAATTTTTCAAAATGACATGCAAGAGACTGTAGCACAGCTCTTCAAGACTGTATCAAGTCTATCAGAGGACCTCGAAAGCACCAGGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATTGGTAGTCAGTTCTTaGGCTGGAACTGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKLVVSS*AGTAVT
Trigger: GGTGACAGCAGTTCCAGCCAAAGAACTGACTACCAA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGAAGAGTCAGTTTCATaGCCTGGTAGTTCACCTGAT +
Preference number: 5 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHEESVS*PGSSPD
Trigger: ATCAGGTGAACTACCAGGCAATGAAACTGACTCTTC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAGTGGGCCGATTCTCTaGCACCAAAACAAACTTTTG +
Preference number: 5 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHSGPIL*HQNKLL
Trigger: CAAAAGTTTGTTTTGGTGCAAGAGAATCGGCCCACT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAACAAATCTTCAAACATTaGCAGCATCATCAAACTCTG +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKQIFKH*QHHQTL
Trigger: CAGAGTTTGATGATGCTGCAAATGTTTGAAGATTTG...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp AATATAGAGAAAGGATGGATGTGGGCTCTGGAGAAGACATGGCCTGATTCCAAAATAGTCATTGTCTTATaGAGGCCATCTTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: NIEKGWMWALEKTWPDSKIVIVL*RPSSIS
Trigger: AGAAATGGAAGATGGCCTCAATAAGACAATGACTAT...TTTGGAATCAGGCCATGTCTTCTCCAGAGCCCACATCCATCCTTTCTCTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATGTGGATGTGAGAGTTaGATTTCTCACACCCTCAGC +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRCGCES*ISHTLS
Trigger: GCTGAGGGTGTGAGAAATCAAACTCTCACATCCACA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATGTAAGATTCTGTAACTaGACCACTCCTTCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHVRFCN*TTPSAF
Trigger: GAAAGCAGAAGGAGTGGTCAAGTTACAGAATCTTAC...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAATACCTGCAAGGGTCTaGGCGACTTGCAAAACAAAG +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRIPARV*ATCKTK
Trigger: CTTTGTTTTGCAAGTCGCCAAGACCCTTGCAGGTAT...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAACTGATCAGTCATTTTTaGCATCACTTCTGGGTCACC +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKLISHF*HHFWVT
Trigger: GGTGACCCAGAAGTGATGCAAAAAATGACTGATCAG...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGAAGAGTCAGTTTCATaGCCTGGTAGTTCACCTGAT +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKEESVS*PGSSPD
Trigger: ATCAGGTGAACTACCAGGCAATGAAACTGACTCTTC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACTTGATACAGTCTaGAAGAGCTGTGCTACAGTC +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKRLDTV*KSCATV
Trigger: GACTGTAGCACAGCTCTTCAAGACTGTATCAAGTCT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATAATACAGAATGCTTCTaGAGTGTTCCTGTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHNTECF*SVPVLE
Trigger: CTCTAGAACAGGAACACTCAAGAAGCATTCTGTATT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGTAACAGGGGGAAACTaGGCTGGAATTGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKVTGGN*AGIVPF
Trigger: AAAAGGAACAATTCCAGCCAAGTTTCCCCCTGTTAC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 90 bp TACAGAATGCTTCTTGAGTGTTCCTGTTCTAGAGCACCTTCTAAATaGGTCTGCTTTACTTCTAGTTCTTTAATAGGCTTCTCACATGTA +
Preference number: 5 (lower is better)
Translates to: YRMLLECSCSRAPSK*VCFTSSSLIGFSHV
Trigger: TACATGTGAGAAGCCTATTAAAGAACTAGAAGTAAAGCAGACTCATTTAGAAGGTGCTCTAGAACAGGAACACTCAAGAAGCATTCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAACTTCATCTCAGTAGTTaGAAGCAAGGTAGCTCATGT +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKLHLSS*KQGSSC
Trigger: ACATGAGCTACCTTGCTTCAAACTACTGAGATGAAG...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATCAAATCTTCAAACATTaGCAGCATCATCAAACTCTG +
Preference number: 5 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHQIFKH*QHHQTL
Trigger: CAGAGTTTGATGATGCTGCAAATGTTTGAAGATTTG...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACCATCTTATTGTCCATaGGAAAGAGAACTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRPSYCP*ERELQP
Trigger: TGGCTGAAGTTCTCTTTCCAATGGACAATAAGATGG...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATTCTAAGGCATATTCATaGATACGTCTTTCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHSKAYS*IRLSKA
Trigger: TGCCTTAGAAAGACGTATCAATGAATATGCCTTAGA...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GGGCCTTGGTCTCTGTGTCTTAGGTTCTTCAACTATAAAAATCATGGTAATCATACTTCGTGGAGAGTTTaGTTAAGCGAAAAGAAGTTA +
Preference number: 5 (lower is better)
Translates to: GPWSLCLRFFNYKNHGNHTSWRV*LSEKKL
Trigger: TAACTTCTTTTCGCTTAACAAAACTCTCCACGAAGT...ATGATTACCATGATTTTTATAGTTGAAGAACCTAAGACACAGAGACCAAGGCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATTTTCTTCCACAAGCTaGATAGTGCAGTTGTCACCA +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRFSSTS*IVQLSP
Trigger: TGGTGACAACTGCACTATCAAGCTTGTGGAAGAAAA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATTTTCTTCCACAAGCTaGATAGTGCAGTTGTCACCA +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKFSSTS*IVQLSP
Trigger: TGGTGACAACTGCACTATCAAGCTTGTGGAAGAAAA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAGACTCAAATGCAAGCTaGTCTATTCCATCAACCACT +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKDSNAS*SIPSTT
Trigger: AGTGGTTGATGGAATAGACAAGCTTGCATTTGAGTC...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAACTGGAATTGTTCCTTTaGCAAGTCGTAACCAGACTT +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKLELFL*QVVTRL
Trigger: AAGTCTGGTTACGACTTGCAAAAGGAACAATTCCAG...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 90 bp TACTCCAAGATACGGAATTCTAAATTTTCCAGTTCTTGGGGTATATaGAGCTCCATAATTGACATCCAAGTTATTAAACAGGATAGGACC +
Preference number: 5 (lower is better)
Translates to: YSKIRNSKFSSSWGI*SSIIDIQVIKQDRT
Trigger: GGTCCTATCCTGTTTAATAACTTGGATGTCAATTATGGAGCTTCATATACCCCAAGAACTGGAAAATTTAGAATTCCGTATCTTGGAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000506328.1
ENST00000508372.1
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAACTTTTTGAATTATTaGCCTGGTGCTTTCGAGGTC +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKNFLNY*PGAFEV
Trigger: GACCTCGAAAGCACCAGGCAAATAATTCAAAAAGTT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAATACAGAATGCTTCTaGAGTGTTCCTGTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKNTECF*SVPVLE
Trigger: CTCTAGAACAGGAACACTCAAGAAGCATTCTGTATT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGACTGATACCTGTTCAGTaGATAAAAGCTGCTCATGTA +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRLIPVQ*IKAAHV
Trigger: TACATGAGCAGCTTTTATCAACTGAACAGGTATCAG...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAAGGGTCTTGGCGACTaGCAAAACAAAGTTATATCT +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKKGLGD*QNKVIS
Trigger: AGATATAACTTTGTTTTGCAAGTCGCCAAGACCCTT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAAAGCATTGTGACACATaGTTAAAACTTCGTGGAGAG +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRKHCDT*LKLRGE
Trigger: CTCTCCACGAAGTTTTAACAATGTGTCACAATGCTT...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 90 bp AATGCAAGCTTGTCTATTCCATCAACCACTAAAAATCCAGAAATATaGGCACTAAATGACTCGATGGTGTACTTGAAAACATATACTCCA +
Preference number: 5 (lower is better)
Translates to: NASLSIPSTTKNPEI*ALNDSMVYLKTYTP
Trigger: TGGAGTATATGTTTTCAAGTACACCATCGAGTCATTTAGTGCTCATATTTCTGGATTTTTAGTGGTTGATGGAATAGACAAGCTTGCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000506328.1
ENST00000508372.1
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAGGTGACAATTTTATGTaGCATCCTATAGACAGGATT +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRGDNFM*HPIDRI
Trigger: AATCCTGTCTATAGGATGCAACATAAAATTGTCACC...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGTTGCTCACTCATTTaGTCCATCTTATTGTCCATT +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKSCSLI*SILLSI
Trigger: AATGGACAATAAGATGGACAAAATGAGTGAGCAACT...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAATATTGCTTCCTTTGGTaGTTCATATGTCATTGTCTG +
Preference number: 5 (lower is better)
Translates to: EEEGQICRYYHRRILIRKYCFLW*FICHCL
Trigger: CAGACAATGACATATGAACAACCAAAGGAAGCAATA...TTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATATTGCTTCCTTTGGTaGTTCATATGTCATTGTCTG +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRYCFLW*FICHCL
Trigger: CAGACAATGACATATGAACAACCAAAGGAAGCAATA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGAATAGTCATTGTCTTATaGAGGCCATCTTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRIVIVL*RPSSIS
Trigger: AGAAATGGAAGATGGCCTCAATAAGACAATGACTAT...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS-3UTR CAA 90 bp GAAGAAGGGCAGATCTGTAGGTACTACCATAGAAGAATACTTATTAGAAAAAGATTTAGACTCAATGTCTaGCAACCGAGTCTCAAAATT +
Preference number: 5 (lower is better)
Translates to: EEGQICRYYHRRILIRKRFRLNV*QPSLKI
Trigger: AATTTTGAGACTCGGTTGCAAGACATTGAGTCTAAA...TCTTTTTCTAATAAGTATTCTTCTATGGTAGTACCTACAGATCTGCCCTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CCA 72 bp GGAACTGCTGTCACCCCGGCTGAGGTATGTTTCCCGTaGGGCTCGATTTCCCACGCCTCCAGTGCCTCCAAC +
Preference number: 6 (lower is better)
Translates to: GTAVTPAEVCFP*GSISHASSASN
Trigger: GTTGGAGGCACTGGAGGCGTGGGAAATCGAGCCCCACGGGAAACATACCTCAGCCGGGGTGACAGCAGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 72 bp AGTCAGTTCTTTGGCTGGAACTGCTGTCACCCCGGCTaGGGTATGTTTCCCGTGGGGCTCGATTTCCCACGC +
Preference number: 6 (lower is better)
Translates to: SQFFGWNCCHPG*GMFPVGLDFPR
Trigger: GCGTGGGAAATCGAGCCCCACGGGAAACATACCTCAGCCGGGGTGACAGCAGTTCCAGCCAAAGAACTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS GCA 72 bp CGCCTCCAGTGCCTCCAACGCCTCCAATGCCTCCAGTaGCTCCAACTGTGTTTAGAGAAGTTGCTTGTTCAT +
Preference number: 6 (lower is better)
Translates to: RLQCLQRLQCLQ*LQLCLEKLLVH
Trigger: ATGAACAAGCAACTTCTCTAAACACAGTTGGAGGCACTGGAGGCATTGGAGGCGTTGGAGGCACTGGAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS GCA 72 bp TTTTGCATCACTTCTGGGTCACCACAGCCTTGCTGCTaGTGCTGCTCAGCTACTCCTCTGCCAACAGCTGTA +
Preference number: 6 (lower is better)
Translates to: FCITSGSPQPCC*CCSATPLPTAV
Trigger: TACAGCTGTTGGCAGAGGAGTAGCTGAGCAGCAGCAGCAGCAAGGCTGTGGTGACCCAGAAGTGATGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CCA 72 bp GGATCCACCGGTCCAGCCACAAGGTCCTTTCCCACCTaGGACATAAGTGACCTGGTTGTCCAATATCACTGT +
Preference number: 6 (lower is better)
Translates to: GSTGPATRSFPT*DISDLVVQYHC
Trigger: ACAGTGATATTGGACAACCAGGTCACTTATGTCCCAGGTGGGAAAGGACCTTGTGGCTGGACCGGTGGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS TCA 72 bp TCCAGCCACAAGGTCCTTTCCCACCTGGGACATAAGTaGCCTGGTTGTCCAATATCACTGTGGGAGATAACC +
Preference number: 6 (lower is better)
Translates to: SSHKVLSHLGHK*PGCPISLWEIT
Trigger: GGTTATCTCCCACAGTGATATTGGACAACCAGGTCACTTATGTCCCAGGTGGGAAAGGACCTTGTGGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS TCA 72 bp TGCTGCTGCTCAGCTACTCCTCTGCCAACAGCTGTATaGCTTTCAGCCTGGTTGGTGTGTATCAAACTTTGC +
Preference number: 6 (lower is better)
Translates to: CCCSATPLPTAV*LSAWLVCIKLC
Trigger: GCAAAGTTTGATACACACCAACCAGGCTGAAAGTCATACAGCTGTTGGCAGAGGAGTAGCTGAGCAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS GCA 72 bp CTTCCATTTATGCACGTGCCCCCATTTTGGCACGGATaGCGACTACAGCTTGAATACTCCTCTGTTACGGAA +
Preference number: 6 (lower is better)
Translates to: LPFMHVPPFWHG*RLQLEYSSVTE
Trigger: TTCCGTAACAGAGGAGTATTCAAGCTGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTGCATAAATGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506328.1
CDS CAA 90 bp AAGAGTCAGTTTCATTGCCTGGTAGTTCACCTGATCAGTCATTTTTaGCATCACTTCTGGGTCACCACAGCCTTGCTGCTGCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: KSQFHCLVVHLISHF*HHFWVTTALLLLLL
Trigger: GAGCAGCAGCAGCAGCAAGGCTGTGGTGACCCAGAAGTGATGCAAAAAATGACTGATCAGGTGAACTACCAGGCAATGAAACTGACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CCA 72 bp CTCCTCTGCCAACAGCTGTATGACTTTCAGCCTGGTTaGTGTGTATCAAACTTTGCTGTTCCTGGGCTCTTA +
Preference number: 6 (lower is better)
Translates to: LLCQQLYDFQPG*CVSNFAVPGLL
Trigger: TAAGAGCCCAGGAACAGCAAAGTTTGATACACACCAACCAGGCTGAAAGTCATACAGCTGTTGGCAGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CCA 72 bp AAGCTAGTTCTTCCATTTATGCACGTGCCCCCATTTTaGCACGGATGCCGACTACAGCTTGAATACTCCTCA +
Preference number: 6 (lower is better)
Translates to: KLVLPFMHVPPF*HGCRLQLEYSS
Trigger: TGAGGAGTATTCAAGCTGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTGCATAAATGGAAGAACTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CCA 72 bp AAGCTAGTTCTTCCATTTATGCACGTGCCCCCATTTTaGCACGGATGCCGACTACAGCTTGAATACTCCTCT +
Preference number: 6 (lower is better)
Translates to: KLVLPFMHVPPF*HGCRLQLEYSS
Trigger: AGAGGAGTATTCAAGCTGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTGCATAAATGGAAGAACTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506328.1
CDS CAA 72 bp GACCACTCCTTCTGCTTTCTCTGTGGATGTGAGAGTTaGATTTCTCACACCCTCAGCAGGTGCACTTGTTTC +
Preference number: 6 (lower is better)
Translates to: DHSFCFLCGCES*ISHTLSRCTCF
Trigger: GAAACAAGTGCACCTGCTGAGGGTGTGAGAAATCAAACTCTCACATCCACAGAGAAAGCAGAAGGAGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CAA 72 bp ACGTGCCCCCATTTTGGCACGGATGCCGACTACAGCTaGAATACTCCTCAGGATATATTATGTTGTCCGTGT +
Preference number: 6 (lower is better)
Translates to: TCPHFGTDADYS*NTPQDILCCPC
Trigger: ACACGGACAACATAATATATCCTGAGGAGTATTCAAGCTGTAGTCGGCATCCGTGCCAAAATGGGGGCACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 90 bp GAAAGGACCACTGATTCTGCTCCAGGATTGAACTTGATGCTAGCGTaGGTTGGGAGGGTAAGATTCTGTAACTTGACCACTCCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: ERTTDSAPGLNLMLA*VGRVRFCNLTTPSA
Trigger: AGCAGAAGGAGTGGTCAAGTTACAGAATCTTACCCTCCCAACCAACGCTAGCATCAAGTTCAATCCTGGAGCAGAATCAGTGGTCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS GCA 72 bp CTTCCATTTATGCACGTGCCCCCATTTTGGCACGGATaGCGACTACAGCTTGAATACTCCTCAGGATATATT +
Preference number: 6 (lower is better)
Translates to: LPFMHVPPFWHG*RLQLEYSSGYI
Trigger: AATATATCCTGAGGAGTATTCAAGCTGTAGTCGGCATCCGTGCCAAAATGGGGGCACGTGCATAAATGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 72 bp TTGGAAAGGACCACTGATTCTGCTCCAGGATTGAACTaGATGCTAGCGTTGGTTGGGAGGGTAAGATTCTGT +
Preference number: 6 (lower is better)
Translates to: LERTTDSAPGLN*MLALVGRVRFC
Trigger: ACAGAATCTTACCCTCCCAACCAACGCTAGCATCAAGTTCAATCCTGGAGCAGAATCAGTGGTCCTTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CAA 72 bp GTAGAATTGGAAAGGACCACTGATTCTGCTCCAGGATaGAACTTGATGCTAGCGTTGGTTGGGAGGGTAAGA +
Preference number: 6 (lower is better)
Translates to: VELERTTDSAPG*NLMLALVGRVR
Trigger: TCTTACCCTCCCAACCAACGCTAGCATCAAGTTCAATCCTGGAGCAGAATCAGTGGTCCTTTCCAATTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CAA 72 bp TTTCATTGCCTGGTAGTTCACCTGATCAGTCATTTTTaGCATCACTTCTGGGTCACCACAGCCTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: FHCLVVHLISHF*HHFWVTTALLL
Trigger: CAGCAGCAAGGCTGTGGTGACCCAGAAGTGATGCAAAAAATGACTGATCAGGTGAACTACCAGGCAATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 90 bp AGTGTAGAATTGGAAAGGACCACTGATTCTGCTCCAGGATTGAACTaGATGCTAGCGTTGGTTGGGAGGGTAAGATTCTGTAACTTGACC +
Preference number: 6 (lower is better)
Translates to: SVELERTTDSAPGLN*MLALVGRVRFCNLT
Trigger: GGTCAAGTTACAGAATCTTACCCTCCCAACCAACGCTAGCATCAAGTTCAATCCTGGAGCAGAATCAGTGGTCCTTTCCAATTCTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 72 bp TTCCTTTGGTTGTTCATATGTCATTGTCTGTCTGAGTaGTGCTCCCTGCTCAAGCAAGGGTTGAAGGATCTC +
Preference number: 6 (lower is better)
Translates to: FLWLFICHCLSE*CSLLKQGLKDL
Trigger: GAGATCCTTCAACCCTTGCTTGAGCAGGGAGCATCACTCAGACAGACAATGACATATGAACAACCAAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 72 bp ACTGATTCTGCTCCAGGATTGAACTTGATGCTAGCGTaGGTTGGGAGGGTAAGATTCTGTAACTTGACCACT +
Preference number: 6 (lower is better)
Translates to: TDSAPGLNLMLA*VGRVRFCNLTT
Trigger: AGTGGTCAAGTTACAGAATCTTACCCTCCCAACCAACGCTAGCATCAAGTTCAATCCTGGAGCAGAATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CAA 90 bp CAACGCCTCCAATGCCTCCAGTGCCTCCAACTGTGTTTAGAGAAGTaGCTTGTTCATTTGACTTTCTGGCAAAGCTCTGAAGAAATTTCA +
Preference number: 6 (lower is better)
Translates to: QRLQCLQCLQLCLEK*LVHLTFWQSSEEIS
Trigger: TGAAATTTCTTCAGAGCTTTGCCAGAAAGTCAAATGAACAAGCAACTTCTCTAAACACAGTTGGAGGCACTGGAGGCATTGGAGGCGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CAA 72 bp TTCCCATCCTCAGGTATAGTCCAAGAATGCTTACTGTaGTTAAGCCCAATGCCCCCACTCCATAAACTAGAA +
Preference number: 6 (lower is better)
Translates to: FPSSGIVQECLL*LSPMPPLHKLE
Trigger: TTCTAGTTTATGGAGTGGGGGCATTGGGCTTAACAACAGTAAGCATTCTTGGACTATACCTGAGGATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CAA 72 bp GTGCTTTCGAGGTCCTCTGATAGACTTGATACAGTCTaGAAGAGCTGTGCTACAGTCTCTTGCATGTCATTT +
Preference number: 6 (lower is better)
Translates to: VLSRSSDRLDTV*KSCATVSCMSF
Trigger: AAATGACATGCAAGAGACTGTAGCACAGCTCTTCAAGACTGTATCAAGTCTATCAGAGGACCTCGAAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 90 bp AATTTCAGTGTAGAATTGGAAAGGACCACTGATTCTGCTCCAGGATaGAACTTGATGCTAGCGTTGGTTGGGAGGGTAAGATTCTGTAAC +
Preference number: 6 (lower is better)
Translates to: NFSVELERTTDSAPG*NLMLALVGRVRFCN
Trigger: GTTACAGAATCTTACCCTCCCAACCAACGCTAGCATCAAGTTCAATCCTGGAGCAGAATCAGTGGTCCTTTCCAATTCTACACTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS TCA 72 bp TGCTTTCGAGGTCCTCTGATAGACTTGATACAGTCTTaGAGAGCTGTGCTACAGTCTCTTGCATGTCATTTT +
Preference number: 6 (lower is better)
Translates to: CFRGPLIDLIQS*RAVLQSLACHF
Trigger: AAAATGACATGCAAGAGACTGTAGCACAGCTCTTCAAGACTGTATCAAGTCTATCAGAGGACCTCGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS TCA 72 bp TACTCCTCAGGATATATTATGTTGTCCGTGTTTCTTTaGGTCCGGCCTATCAGGACTGTGGTAAGATTTACC +
Preference number: 6 (lower is better)
Translates to: YSSGYIMLSVFL*VRPIRTVVRFT
Trigger: GGTAAATCTTACCACAGTCCTGATAGGCCGGACTCAAAGAAACACGGACAACATAATATATCCTGAGGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 72 bp CTCATCTCTGGGAATACCTGCAAGGGTCTTGGCGACTaGCAAAACAAAGTTATATCTCTGATTGTCATTGAC +
Preference number: 6 (lower is better)
Translates to: LISGNTCKGLGD*QNKVISLIVID
Trigger: GTCAATGACAATCAGAGATATAACTTTGTTTTGCAAGTCGCCAAGACCCTTGCAGGTATTCCCAGAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 90 bp AAATCTGGAGCTAAAGCATTTTCTTCCACAAGCTTGATAGTGCAGTaGTCACCAGTAAAAGGATGTCTGCAGGCACAGGTAAAGCTAGTT +
Preference number: 6 (lower is better)
Translates to: KSGAKAFSSTSLIVQ*SPVKGCLQAQVKLV
Trigger: AACTAGCTTTACCTGTGCCTGCAGACATCCTTTTACTGGTGACAACTGCACTATCAAGCTTGTGGAAGAAAATGCTTTAGCTCCAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000506328.1
ENST00000508372.1
CDS CAA 72 bp ATACTCCTCAGGATATATTATGTTGTCCGTGTTTCTTaGAGTCCGGCCTATCAGGACTGTGGTAAGATTTAC +
Preference number: 6 (lower is better)
Translates to: ILLRIYYVVRVS*SPAYQDCGKIY
Trigger: GTAAATCTTACCACAGTCCTGATAGGCCGGACTCAAAGAAACACGGACAACATAATATATCCTGAGGAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS GCA 72 bp GGTATGAGCGTCTGGGTAACTTTAGACTCAATGTCTTaGAACCGAGTCTCAAAATTTTTGGAAATCTTGGTA +
Preference number: 6 (lower is better)
Translates to: GMSVWVTLDSMS*NRVSKFLEILV
Trigger: TACCAAGATTTCCAAAAATTTTGAGACTCGGTTGCAAGACATTGAGTCTAAAGTTACCCAGACGCTCATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CCA 72 bp CAATGTGATTCCTTAGTTCCACTATATCAGTCAAAGTaGGCCGATTCTCTTGCACCAAAACAAACTTTTGCT +
Preference number: 6 (lower is better)
Translates to: QCDSLVPLYQSK*ADSLAPKQTFA
Trigger: AGCAAAAGTTTGTTTTGGTGCAAGAGAATCGGCCCACTTTGACTGATATAGTGGAACTAAGGAATCACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CCA 72 bp TTAGTTTCTCATCTCTGGGAATACCTGCAAGGGTCTTaGCGACTTGCAAAACAAAGTTATATCTCTGATTGT +
Preference number: 6 (lower is better)
Translates to: LVSHLWEYLQGS*RLAKQSYISDC
Trigger: ACAATCAGAGATATAACTTTGTTTTGCAAGTCGCCAAGACCCTTGCAGGTATTCCCAGAGATGAGAAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 72 bp TGCCTCCAACTGTGTTTAGAGAAGTTGCTTGTTCATTaGACTTTCTGGCAAAGCTCTGAAGAAATTTCAGTG +
Preference number: 6 (lower is better)
Translates to: CLQLCLEKLLVH*TFWQSSEEISV
Trigger: CACTGAAATTTCTTCAGAGCTTTGCCAGAAAGTCAAATGAACAAGCAACTTCTCTAAACACAGTTGGAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264790.7
ENST00000394980.5
CDS CAA 72 bp TTATTGAGGCCATCTTCCATTTCTAAGGCATATTCATaGATACGTCTTTCTAAGGCATCATCACGACCCTGT +
Preference number: 6 (lower is better)
Translates to: LLRPSSISKAYS*IRLSKASSRPC
Trigger: ACAGGGTCGTGATGATGCCTTAGAAAGACGTATCAATGAATATGCCTTAGAAATGGAAGATGGCCTCAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 72 bp AGGTATGAGCGTCTGGGTAACTTTAGACTCAATGTCTaGCAACCGAGTCTCAAAATTTTTGGAAATCTTGGT +
Preference number: 6 (lower is better)
Translates to: RYERLGNFRLNV*QPSLKIFGNLG
Trigger: ACCAAGATTTCCAAAAATTTTGAGACTCGGTTGCAAGACATTGAGTCTAAAGTTACCCAGACGCTCATACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 90 bp GTCATTGTCTTATTGAGGCCATCTTCCATTTCTAAGGCATATTCATaGATACGTCTTTCTAAGGCATCATCACGACCCTGTACTTCATTT +
Preference number: 6 (lower is better)
Translates to: VIVLLRPSSISKAYS*IRLSKASSRPCTSF
Trigger: AAATGAAGTACAGGGTCGTGATGATGCCTTAGAAAGACGTATCAATGAATATGCCTTAGAAATGGAAGATGGCCTCAATAAGACAATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS TCA 72 bp CTTCTTGAGTGTTCCTGTTCTAGAGCACCTTCTAAATaGGTCTGCTTTACTTCTAGTTCTTTAATAGGCTTC +
Preference number: 6 (lower is better)
Translates to: LLECSCSRAPSK*VCFTSSSLIGF
Trigger: GAAGCCTATTAAAGAACTAGAAGTAAAGCAGACTCATTTAGAAGGTGCTCTAGAACAGGAACACTCAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS CAA 90 bp TTTCTCCATCTCCAAAGAGACGGTGAGATTGTTAATCTTGCTTTCTaGAATGTGCAAATCTTCAAACATTTGCAGCATCATCAAACTCTG +
Preference number: 6 (lower is better)
Translates to: FLHLQRDGEIVNLAF*NVQIFKHLQHHQTL
Trigger: CAGAGTTTGATGATGCTGCAAATGTTTGAAGATTTGCACATTCAAGAAAGCAAGATTAACAATCTCACCGTCTCTTTGGAGATGGAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1
CDS TCA 72 bp TTGTCTATTCCATCAACCACTAAAAATCCAGAAATATaGGCACTAAATGACTCGATGGTGTACTTGAAAACA +
Preference number: 6 (lower is better)
Translates to: LSIPSTTKNPEI*ALNDSMVYLKT
Trigger: TGTTTTCAAGTACACCATCGAGTCATTTAGTGCTCATATTTCTGGATTTTTAGTGGTTGATGGAATAGACAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000506328.1
ENST00000508372.1
CDS CAA 72 bp TTAGTTGCTCACTCATTTTGTCCATCTTATTGTCCATaGGAAAGAGAACTTCAGCCAATGTTTGATTTAACA +
Preference number: 6 (lower is better)
Translates to: LVAHSFCPSYCP*ERELQPMFDLT
Trigger: TGTTAAATCAAACATTGGCTGAAGTTCTCTTTCCAATGGACAATAAGATGGACAAAATGAGTGAGCAACTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264790.7
ENST00000394980.5
ENST00000508372.1