Pregenerated sensors for MMP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000149968Ensembl transcript IDs: ENST00000299855.10, ENST00000524478.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGATACAGTCACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTTaGGAAAGATCACTCTATGTGACAAGGTGCAAGCTAAGCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RYSHLSVAHECFPFS*ERSLYVTRCKLSSS Trigger: GCTGCTGCTTAGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGACTGTATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| 3UTR GCA 90 bp | GCAAATAGTCTACACAGATACAGTCACTTGTCTGTTGCACACGAGTaGTTCCCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: ANSLHRYSHLSVAHE*FPFSWERSLYVTRC Trigger: GCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGACTGTATCTGTGTAGACTATTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| 3UTR CAA 90 bp | CAGATACAGTCACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTaGGGAAAGATCACTCTATGTGACAAGGTGCAAGCTAAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: QIQSLVCCTRVLPLL*GKITLCDKVQAKQQ Trigger: CTGCTGCTTAGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGACTGTATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| 3UTR CAA 90 bp | AACATAAAAATGACCGGCAAGATACAGATTCACGCTCAAGTTCCCTaGAGTGTGACTCGAGTCACAGCACAGGCAGGAGAAAACGAACAT | + |
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Preference number: 2 (lower is better) Translates to: NIKMTGKIQIHAQVP*SVTRVTAQAGENEH Trigger: ATGTTCGTTTTCTCCTGCCTGTGCTGTGACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATCTGTATCTTGCCGGTCATTTTTATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| 3UTR-3UTR CAA 90 bp | TCACTCTATGTGACAAGGTGCAAGCTAAGCAGCAGCCCATTTGAATGCCCTGTACACGCTCAAGTTCCCTaGAGTGTGACTCGAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: SLYVTRCKLSSSPFECPVHAQVP*SVTRVT Trigger: TGTGACTCGAGTCACACTCAAGGGAACTTGAGCGTG...TACAGGGCATTCAAATGGGCTGCTGCTTAGCTTGCACCTTGTCACATAGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| 3UTR CCA 72 bp | CACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTTaGGAAAGATCACTCTATGTGACAAGGTGCAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: HLSVAHECFPFS*ERSLYVTRCKL Trigger: TAGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| 3UTR GCA 72 bp | CTACACAGATACAGTCACTTGTCTGTTGCACACGAGTaGTTCCCCTTCTCTTGGGAAAGATCACTCTATGTG | + |
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Preference number: 3 (lower is better) Translates to: LHRYSHLSVAHE*FPFSWERSLYV Trigger: CACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGACTGTATCTGTGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| 3UTR-3UTR CAA 90 bp | CGGCAAGATACAGATTCACGCTCAAGTTCCCTTGAGTGTGACTCGAGTCACAGCTTTAAAGTGCCCATATaGTGCCTTCTACATATCTCT | + |
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Preference number: 3 (lower is better) Translates to: RQDTDSRSSSLECDSSHSFKVPI*CLLHIS Trigger: AGAGATATGTAGAAGGCACAATATGGGCACTTTAAA...GCTGTGACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATCTGTATCTTGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CCA 90 bp | AATGACCGGCAAGATACAGATTCACGCTCAAGTTCCCTTGAGTGTGACTCGAGTTGGCGTCCCAGGTTCTaGAGGGACAGGTTCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NDRQDTDSRSSSLECDSSWRPRF*RDRFRG Trigger: CCCACGGAACCTGTCCCTCCAGAACCTGGGACGCCA...ACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATCTGTATCTTGCCGGTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CCA 90 bp | GATTCACGCTCAAGTTCCCTTGAGTGTGACTCGAGTCACAGCACAGGCAGGAGAGAACAAGGTTCATGCTaGTGTCCTCACCCCTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: DSRSSSLECDSSHSTGRREQGSC*CPHPLQ Trigger: CTGCAAGGGGTGAGGACACCAGCATGAACCTTGTTC...TCTCCTGCCTGTGCTGTGACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CCA 90 bp | GTCACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTTGGGAAAGATCACTCTAGGATCACAGTTGGCTaGCGTCCCAGGTTCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VTCLLHTSASPSLGKDHSRITVG*RPRFWR Trigger: CCTCCAGAACCTGGGACGCCAGCCAACTGTGATCCT...AGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | GATTCACGCTCAAGTTCCCTTGAGTGTGACTCGAGTCACAGCACAGGCAGGAGACTCTATGTGACAAGGTaGAAGCTAAGCAGCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: DSRSSSLECDSSHSTGRRLYVTR*KLSSSP Trigger: TGGGCTGCTGCTTAGCTTGCACCTTGTCACATAGAG...TCTCCTGCCTGTGCTGTGACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CCA 90 bp | GCTCAAGTTCCCTTGAGTGTGACTCGAGTCACAGCACAGGCAGGAGAAAACGAAATCTCCATTAATCCCTaGCCCAGGGGCATAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: AQVPLSVTRVTAQAGENEISINP*PRGIGM Trigger: CATGCCTATGCCCCTGGGCCAGGGATTAATGGAGAT...TTCGTTTTCTCCTGCCTGTGCTGTGACTCGAGTCACACTCAAGGGAACTTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR TCA 90 bp | CCCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGTGCAAGCTAAGCAGCAGACCGAGTCAGGTCTGTaGGTGAGTGATAGAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: PLLLGKITLCDKVQAKQQTESGL*VSDRVG Trigger: ACCCACTCTATCACTCACTCACAGACCTGACTCGGT...CTGCTGCTTAGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | GACCGGCAAGATACAGATTCACGCTCAAGTTCCCTTGAGTGTGACTCGAGTCACTCTGAACAAGGTTCATaGTGGTGTCCTCACCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: DRQDTDSRSSSLECDSSHSEQGS*WCPHPL Trigger: CAAGGGGTGAGGACACCAGCATGAACCTTGTTCAGA...GTGACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATCTGTATCTTGCCGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| 3UTR CAA 72 bp | ATGACCGGCAAGATACAGATTCACGCTCAAGTTCCCTaGAGTGTGACTCGAGTCACAGCACAGGCAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: MTGKIQIHAQVP*SVTRVTAQAGE Trigger: TTCTCCTGCCTGTGCTGTGACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATCTGTATCTTGCCGGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR TCA 90 bp | CACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTTGGGAAAGATCACTCTATATCCAATGGATAGGCTaGGCAAACTGCCACGCACAG | + |
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Preference number: 4 (lower is better) Translates to: HLSVAHECFPFSWERSLYIQWIG*ANCHAQ Trigger: CTGTGCGTGGCAGTTTGCTCAGCCTATCCATTGGAT...ATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR TCA 90 bp | GTGACTCGAGTCACAGCACAGGCAGGAGAAAACGAACATTTCAATTCACAGAGATGCGGCATCCACGCCTaGAGGAAGAGATGGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: VTRVTAQAGENEHFNSQRCGIHA*RKRWPK Trigger: TTTTGGCCATCTCTTCCTTCAGGCGTGGATGCCGCA...TCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCTGTGCTGTGACTCGAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | GTCACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTTGGGAAAGATCACTCTTCTGTTGCACACGAGTaGTTCCCCTTCTCTTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VTCLLHTSASPSLGKDHSSVAHE*FPFSWE Trigger: TTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGA...AGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR TCA 90 bp | AGTCACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTTGGGAAAGATCACTCCCATTTATATCATCTTaGGACAGGCGGAACCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SHLSVAHECFPFSWERSLPFISS*DRRNRV Trigger: GACTCGGTTCCGCCTGTCTCAAGATGATATAAATGG...GAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | TCACTCTATGTGACAAGGTGCAAGCTAAGCAGCAGCCCATTTGAATGCCCTGTAGTTGTCTCTATGCCTTaGTGTCTTGCCTGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SLYVTRCKLSSSPFECPVVVSMP*CLACLL Trigger: AAGGAGGCAGGCAAGACAGCAAGGCATAGAGACAAC...TACAGGGCATTCAAATGGGCTGCTGCTTAGCTTGCACCTTGTCACATAGAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | CCCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGTGCAAGCTAAGCAGCAGTCTATGTTGTCTCTATaGCTTGCTGTCTTGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PLLLGKITLCDKVQAKQQSMLSL*LAVLPA Trigger: GGCAGGCAAGACAGCAAGGCATAGAGACAACATAGA...CTGCTGCTTAGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| 3UTR CAA 72 bp | TCACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTaGGGAAAGATCACTCTATGTGACAAGGTGCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SLVCCTRVLPLL*GKITLCDKVQA Trigger: AGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | CGGCAAGATACAGATTCACGCTCAAGTTCCCTTGAGTGTGACTCGAGTCACAGCCTTATCAGAAATGGCTaGATCGATTTTCCTCACGGT | + |
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Preference number: 4 (lower is better) Translates to: RQDTDSRSSSLECDSSHSLIRNG*IDFPHG Trigger: ACCGTGAGGAAAATCGATGCAGCCATTTCTGATAAG...GCTGTGACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATCTGTATCTTGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CCA 90 bp | GTGACTCGAGTCACAGCACAGGCAGGAGAAAACGAACATTTCAATTCACAGAGACTTCAGCTATTTGCTTaGGAAAGCCTGGCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: VTRVTAQAGENEHFNSQRLQLFA*ESLAPW Trigger: CCATGGAGCCAGGCTTTCCCAAGCAAATAGCTGAAG...TCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCTGTGCTGTGACTCGAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR TCA 90 bp | CTCTATGTGACAAGGTGCAAGCTAAGCAGCAGCCCATTTGAATGCCCTGTAATAAGTCAGGTCTGTGAGTaGGTGATAGAGTGGGTACAT | + |
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Preference number: 4 (lower is better) Translates to: LYVTRCKLSSSPFECPVISQVCE*VIEWVH Trigger: ATGTACCCACTCTATCACTCACTCACAGACCTGACT...TATTACAGGGCATTCAAATGGGCTGCTGCTTAGCTTGCACCTTGTCACATAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR TCA 90 bp | CCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGTGCAAGCTAAGCAGCAGCAAGCAGCAGCCCATTTaGATGCCCTGTAATAACATA | + |
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Preference number: 4 (lower is better) Translates to: PFSWERSLYVTRCKLSSSKQQPI*MPCNNI Trigger: TATGTTATTACAGGGCATTCAAATGGGCTGCTGCTT...GCTGCTGCTTAGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | CAGCACAGGCAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAAGAAAACCTAGGGTGTGGATaGCTCTTGGGTATCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QHRQEKTNISIHRDLGEENLGCG*LLGIQL Trigger: GAGCTGGATACCCAAGAGGCATCCACACCCTAGGTT...TTCTTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | CTCTATGTGACAAGGTGCAAGCTAAGCAGCAGCCCATTTGAATGCCCTGTAATAAAGTCTTCAGCTATTTaGTTGGGAAAGCCTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LYVTRCKLSSSPFECPVIKSSAI*LGKPGS Trigger: GGAGCCAGGCTTTCCCAAGCAAATAGCTGAAGACTT...TATTACAGGGCATTCAAATGGGCTGCTGCTTAGCTTGCACCTTGTCACATAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CCA 90 bp | TCTACACAGATACAGTCACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTTGTGCTTCCCCTTCTCTTaGGAAAGATCACTCTATGTG | + |
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Preference number: 4 (lower is better) Translates to: STQIQSLVCCTRVLPLLLCFPFS*ERSLYV Trigger: CACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCA...CAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGACTGTATCTGTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | CTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTTGGGAAAGATCACTCTATGTGATTTGCGCCAAAAGTaGCTGTCTTTAAAGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: LVCCTRVLPLLLGKITLCDLRQK*LSLKIR Trigger: CCTGATCTTTAAAGACAGGCACTTTTGGCGCAAATC...ACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR TCA 90 bp | GTTGCACACGAGTGCTTCCCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGGTCAAACTCCAACTGTaGAGATCCAGTAAAGAAATA | + |
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Preference number: 4 (lower is better) Translates to: VAHECFPFSWERSLYVTRVKLQL*RSSKEI Trigger: TATTTCTTTACTGGATCTTCACAGTTGGAGTTTGAC...CCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | CCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGTGCAAGCTAAGCAGCAGCAAAGTGCCCATATTGTaGCTTCTACATATCTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PFSWERSLYVTRCKLSSSKVPIL*LLHISF Trigger: GAAAGAGATATGTAGAAGGCACAATATGGGCACTTT...GCTGCTGCTTAGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | AATAAGCAAATAGTCTACACAGATACAGTCACTTGTCTGTTGCACACGAGTGCTCAGTCACTTGTCTGTTaGACACGAGTGCTTCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: NKQIVYTDTVTCLLHTSAQSLVC*TRVLPL Trigger: AAGGGGAAGCACTCGTGTGCAACAGACAAGTGACTG...AGCACTCGTGTGCAACAGACAAGTGACTGTATCTGTGTAGACTATTTGCTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| 3UTR CAA 72 bp | AAGCAAATAGTCTACACAGATACAGTCACTTGTCTGTaGCACACGAGTGCTTCCCCTTCTCTTGGGAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: KQIVYTDTVTCL*HTSASPSLGKD Trigger: ATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGACTGTATCTGTGTAGACTATTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CCA 90 bp | CCCTTGAGTGTGACTCGAGTCACAGCACAGGCAGGAGAAAACGAACATTTCAATCAACGAGAAATAAATTaGTCCCTGTTGTATCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PLSVTRVTAQAGENEHFNQREIN*SLLYPL Trigger: CAAAGGATACAACAGGGACCAATTTATTTCTCGTTG...ATTGAAATGTTCGTTTTCTCCTGCCTGTGCTGTGACTCGAGTCACACTCAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CCA 90 bp | CAGCACAGGCAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAAGAAGAAAGCCTGGCTCCATaGAATTTCTCTTCTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: QHRQEKTNISIHRDLGEEESLAP*NFSSHQ Trigger: TTGATGAGAAGAGAAATTCCATGGAGCCAGGCTTTC...TTCTTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCTGTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CCA 90 bp | AATAAGCAAATAGTCTACACAGATACAGTCACTTGTCTGTTGCACACGAGTGCTTTGCTTGGGAAAGCCTaGCTCCATGGAATTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NKQIVYTDTVTCLLHTSALLGKA*LHGISL Trigger: AAGAGAAATTCCATGGAGCCAGGCTTTCCCAAGCAA...AGCACTCGTGTGCAACAGACAAGTGACTGTATCTGTGTAGACTATTTGCTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR TCA 90 bp | AGGCAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAAGAATTATTACAGGTTCAAGCTTCCTaGGGGATTTGCGCCAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: RQEKTNISIHRDLGEELLQVQAS*GICAKS Trigger: ACTTTTGGCGCAAATCCCTCAGGAAGCTTGAACCTG...TAATAATTCTTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | CAGCACAGGCAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAAGAACATAGAGGGACTGAATaGCATTTATATCATCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: QHRQEKTNISIHRDLGEEHRGTE*HLYHLE Trigger: CTCAAGATGATATAAATGGCATTCAGTCCCTCTATG...TTCTTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCTGTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CCA 90 bp | TCACAGCACAGGCAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAAACTCTTCATTTCCACTaGCTTTACTTAGCTCTATGT | + |
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Preference number: 4 (lower is better) Translates to: SQHRQEKTNISIHRDLGETLHFH*LYLALC Trigger: ACATAGAGCTAAGTAAAGCCAGTGGAAATGAAGAGT...TTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCTGTGCTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR GCA 90 bp | CAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAAGAATTATTAGCTGTGTGTCACTTTCTTTaGATTTGGGTCAAACTCCAA | + |
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Preference number: 4 (lower is better) Translates to: QEKTNISIHRDLGEELLAVCHFL*IWVKLQ Trigger: TTGGAGTTTGACCCAAATGCAAAGAAAGTGACACAC...AGCTAATAATTCTTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR TCA 90 bp | CAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAAGAATTATTAGCTTTTTCTAGATATTTCTaGACAAGGTTCATGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QEKTNISIHRDLGEELLAFSRYF*TRFMLV Trigger: CACCAGCATGAACCTTGTTCAGAAATATCTAGAAAA...AGCTAATAATTCTTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | GATTCACGCTCAAGTTCCCTTGAGTGTGACTCGAGTCACAGCACAGGCAGGAGAACAGTCACTTGTCTGTaGCACACGAGTGCTTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: DSRSSSLECDSSHSTGRRTVTCL*HTSASP Trigger: AGGGGAAGCACTCGTGTGCAACAGACAAGTGACTGT...TCTCCTGCCTGTGCTGTGACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | AGTCACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTTGGGAAAGATCACTCTGGTGTCCTCACCCCTaGCAGCTCCATCCAATGGAT | + |
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Preference number: 5 (lower is better) Translates to: SHLSVAHECFPFSWERSLWCPHP*QLHPMD Trigger: ATCCATTGGATGGAGCTGCAAGGGGTGAGGACACCA...GAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | CGGCAAGATACAGATTCACGCTCAAGTTCCCTTGAGTGTGACTCGAGTCACAGCCACGCTCAAGTTCCCTaGAGTGTGACTCGAGTCACA | + |
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Preference number: 5 (lower is better) Translates to: RQDTDSRSSSLECDSSHSHAQVP*SVTRVT Trigger: TGTGACTCGAGTCACACTCAAGGGAACTTGAGCGTG...GCTGTGACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATCTGTATCTTGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | CCCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGTGCAAGCTAAGCAGCAGCGATTTTCCTCACGGTaGGAGGGAAACCTAGGGTGT | + |
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Preference number: 5 (lower is better) Translates to: PLLLGKITLCDKVQAKQQRFSSR*EGNLGC Trigger: ACACCCTAGGTTTCCCTCCAACCGTGAGGAAAATCG...CTGCTGCTTAGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | ACACGAGTGCTTCCCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGTGCAATGTTGTCTCTATGCCTaGCTGTCTTGCCTGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TRVLPLLLGKITLCDKVQCCLYA*LSCLPP Trigger: AGGAGGCAGGCAAGACAGCAAGGCATAGAGACAACA...TTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | CTTCCCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGTGCAAGCTAAGCAGAGCTTCCTGAGGGATTaGCGCCAAAAGTGCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: LPLLLGKITLCDKVQAKQSFLRD*RQKCLS Trigger: AGACAGGCACTTTTGGCGCAAATCCCTCAGGAAGCT...CTGCTTAGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | GTCACTTGTCTGTTGCACACGAGTGCTTCCCCTTCTCTTGGGAAAGATCACTCTGCCATTTATATCATCTaGAGACAGGCGGAACCGAGT | + |
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Preference number: 5 (lower is better) Translates to: VTCLLHTSASPSLGKDHSAIYII*RQAEPS Trigger: ACTCGGTTCCGCCTGTCTCAAGATGATATAAATGGC...AGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTGCAACAGACAAGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | ACACGAGTGCTTCCCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGTGCAAGTGCTTCCCCTTCTCTaGGGAAAGATCACTCTATGT | + |
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Preference number: 5 (lower is better) Translates to: TRVLPLLLGKITLCDKVQVLPLL*GKITLC Trigger: ACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCAC...TTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | TCACAGCACAGGCAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAATCTTCAGCTATTTGCTaGGGAAAGCCTGGCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: SQHRQEKTNISIHRDLGESSAIC*GKPGSM Trigger: CATGGAGCCAGGCTTTCCCAAGCAAATAGCTGAAGA...TTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCTGTGCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | CCCCTTCTCTTGGGAAAGATCACTCTATGTGACAAGGTGCAAGCTAAGCAGCAGAAACAGCATCAATCTTaGAGTCAATCCCTGGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: PLLLGKITLCDKVQAKQQKQHQS*SQSLES Trigger: ACTTTCCAGGGATTGACTCAAAGATTGATGCTGTTT...CTGCTGCTTAGCTTGCACCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | AATGACCGGCAAGATACAGATTCACGCTCAAGTTCCCTTGAGTGTGACTCGAGTGCAACGAGAAATAAATaGGTCCCTGTTGTATCCTTT | + |
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Preference number: 5 (lower is better) Translates to: NDRQDTDSRSSSLECDSSATRNK*VPVVSF Trigger: AAAGGATACAACAGGGACCAATTTATTTCTCGTTGC...ACTCGAGTCACACTCAAGGGAACTTGAGCGTGAATCTGTATCTTGCCGGTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | CTCTATGTGACAAGGTGCAAGCTAAGCAGCAGCCCATTTGAATGCCCTGTAATAATGAAAACGAGGTCCTaGCTAGTAACTTCATATGCG | + |
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Preference number: 5 (lower is better) Translates to: LYVTRCKLSSSPFECPVIMKTRS*LVTSYA Trigger: CGCATATGAAGTTACTAGCAAGGACCTCGTTTTCAT...TATTACAGGGCATTCAAATGGGCTGCTGCTTAGCTTGCACCTTGTCACATAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | TCACAGCACAGGCAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAAACAGCAACAGTAGGATaGGAAGACTCTTCATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SQHRQEKTNISIHRDLGETATVG*EDSSFP Trigger: TGGAAATGAAGAGTCTTCCAATCCTACTGTTGCTGT...TTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCTGTGCTGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | GTGACTCGAGTCACAGCACAGGCAGGAGAAAACGAACATTTCAATTCACAGAGAATAAATTGGTCCCTGTaGTATCCTTTGTCCATTGTT | + |
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Preference number: 5 (lower is better) Translates to: VTRVTAQAGENEHFNSQRINWSL*YPLSIV Trigger: AACAATGGACAAAGGATACAACAGGGACCAATTTAT...TCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCTGTGCTGTGACTCGAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | AGAGACTTAGGTGAAGAATTATTAGCTTCATTTAAAGTGCCCATATTGTGCCTTCACAGATACAGTCACTaGTCTGTTGCACACGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: RDLGEELLASFKVPILCLHRYSH*SVAHEC Trigger: GCACTCGTGTGCAACAGACAAGTGACTGTATCTGTG...AAGGCACAATATGGGCACTTTAAATGAAGCTAATAATTCTTCACCTAAGTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | CAGCACAGGCAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAAGAATTTAAAGTGCCCATATaGTGCCTTCTACATATCTCT | + |
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Preference number: 5 (lower is better) Translates to: QHRQEKTNISIHRDLGEEFKVPI*CLLHIS Trigger: AGAGATATGTAGAAGGCACAATATGGGCACTTTAAA...TTCTTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCTGTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS-3UTR CAA 90 bp | AGGCAGGAGAAAACGAACATTTCAATTCACAGAGACTTAGGTGAAGAATTATTATTACTTAGCTCTATGTaGTCTCTATGCCTTGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: RQEKTNISIHRDLGEELLLLSSM*SLCLAV Trigger: GACAGCAAGGCATAGAGACAACATAGAGCTAAGTAA...TAATAATTCTTCACCTAAGTCTCTGTGAATTGAAATGTTCGTTTTCTCCTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS CAA 72 bp | ATTTCTGAACAAGGTTCATGCTGGTGTCCTCACCCCTaGCAGCTCCATCCAATGGATAGGCTGAGCAAACTG | + |
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Preference number: 6 (lower is better) Translates to: ISEQGSCWCPHP*QLHPMDRLSKL Trigger: CAGTTTGCTCAGCCTATCCATTGGATGGAGCTGCAAGGGGTGAGGACACCAGCATGAACCTTGTTCAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS CAA 90 bp | TTTCTAGATATTTCTGAACAAGGTTCATGCTGGTGTCCTCACCCCTaGCAGCTCCATCCAATGGATAGGCTGAGCAAACTGCCACGCACA | + |
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Preference number: 6 (lower is better) Translates to: FLDISEQGSCWCPHP*QLHPMDRLSKLPRT Trigger: TGTGCGTGGCAGTTTGCTCAGCCTATCCATTGGATGGAGCTGCAAGGGGTGAGGACACCAGCATGAACCTTGTTCAGAAATATCTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299855.10 |
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| CDS CAA 72 bp | AGGCTGAGCAAACTGCCACGCACAGCAACAGTAGGATaGGAAGACTCTTCATTTCCACTGGCTTTACTTAGC | + |
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Preference number: 6 (lower is better) Translates to: RLSKLPRTATVG*EDSSFPLALLS Trigger: GCTAAGTAAAGCCAGTGGAAATGAAGAGTCTTCCAATCCTACTGTTGCTGTGCGTGGCAGTTTGCTCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299855.10 ENST00000524478.1 |
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| CDS CAA 90 bp | CCAATGGATAGGCTGAGCAAACTGCCACGCACAGCAACAGTAGGATaGGAAGACTCTTCATTTCCACTGGCTTTACTTAGCTCTATGTTG | + |
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Preference number: 6 (lower is better) Translates to: PMDRLSKLPRTATVG*EDSSFPLALLSSML Trigger: CAACATAGAGCTAAGTAAAGCCAGTGGAAATGAAGAGTCTTCCAATCCTACTGTTGCTGTGCGTGGCAGTTTGCTCAGCCTATCCATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299855.10 ENST00000524478.1 |
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