RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMP28 (Homo sapiens)

Ensembl gene IDs: ENSG00000271447, ENSG00000278843

Ensembl transcript IDs: ENST00000605424.6, ENST00000611911.4, ENST00000612292.1, ENST00000612672.1, ENST00000613289.2, ENST00000615136.4, ENST00000615317.4, ENST00000616383.1, ENST00000619655.4, ENST00000631999.1, ENST00000632268.1, ENST00000632360.1, ENST00000632913.1, ENST00000634159.1

Found 736 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTTaGCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGGTCATCTCG +
Preference number: 1 (lower is better)
Translates to: AAHPGQLGGPAARGG*LQFGLVEAPVAVIS
Trigger: CGAGATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR GCA 90 bp GAGGTGAGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATaGCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAG +
Preference number: 1 (lower is better)
Translates to: EVRRCLQNRALPELA*QQPIQGSSVAQRPE
Trigger: CTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCTCACCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR CCA 90 bp GCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTaGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGGTCAT +
Preference number: 1 (lower is better)
Translates to: ASSPSRAARWPSGPR*LPAVWPGRGASSGH
Trigger: ATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR CCA 90 bp CGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTaGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGA +
Preference number: 1 (lower is better)
Translates to: RSPSWHASSPSRAAR*PSGPRWLPAVWPGR
Trigger: TCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR GCA 90 bp AAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGG +
Preference number: 1 (lower is better)
Translates to: KGRQTSRWRLCCPVF*RGTQRLLRGVLPRG
Trigger: CCCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
3UTR GCA 90 bp CATGATTTTGCCCTGAGAGCACCACCAGTTTCTGAGGTGAGGAGGTaGCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCC +
Preference number: 1 (lower is better)
Translates to: HDFALRAPPVSEVRR*LQNRALPELACQQP
Trigger: GGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCTCACCTCAGAAACTGGTGGTGCTCTCAGGGCAAAATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR TCA 90 bp ATCAGTCTCCCTCCCACTCTGTGTCCTGACCCCACAAAGGGCCTCTaGGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTG +
Preference number: 1 (lower is better)
Translates to: ISLPPTLCPDPTKGL*GWRRLCLHPHPCFL
Trigger: CAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGGCCCTTTGTGGGGTCAGGACACAGAGTGGGAGGGAGACTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR TCA 90 bp GTCCTATTCACCCACTCCTCCCGTGCCCTAGGGAAGAGAGGTTACTaGCAAAGTCCAGTCCCAGGCTCAGCTGTTTTCCTAGCCATTGGC +
Preference number: 1 (lower is better)
Translates to: VLFTHSSRALGKRGY*QSPVPGSAVFLAIG
Trigger: GCCAATGGCTAGGAAAACAGCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
3UTR GCA 90 bp ATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTaGCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGTCCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: IMVLKPRGPIHPLLP*PREERLLTKSSPRL
Trigger: GAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
3UTR GCA 90 bp TCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTaGCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTT +
Preference number: 1 (lower is better)
Translates to: SSRNKGRQTSRWRLC*PVFCRGTQRLLRGV
Trigger: AACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
3UTR GCA 90 bp CATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGG +
Preference number: 1 (lower is better)
Translates to: HSSRNKGRQTSRWRL*CPVFCRGTQRLLRG
Trigger: CCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR GCA 90 bp ATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTaGATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGGC +
Preference number: 1 (lower is better)
Translates to: IPPPPPCGGDRQRQC*ILQGTKADRLPDGG
Trigger: GCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR CCA 90 bp ACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTT +
Preference number: 1 (lower is better)
Translates to: TMLHSSRNKGRQTSR*RLCCPVFCRGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR GCA 90 bp TCGAATTTCTCTGCTGAGTTTTTCATCCCCCTGCTTGGATCCCAGTaGTGTTACCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACA +
Preference number: 1 (lower is better)
Translates to: SNFSAEFFIPLLGSQ*CYLLKGTVPLAEET
Trigger: TGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGGGATGAAAAACTCAGCAGAGAAATTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR GCA 90 bp TTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATaGCGATCTCCCAGAACTTTGTCCTCAGGCTTTAGCCGAAGAAAC +
Preference number: 1 (lower is better)
Translates to: FLVASLGRCCYLHSQ*RSPRTLSSGFSRRN
Trigger: GTTTCTTCGGCTAAAGCCTGAGGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
3UTR-3UTR GCA 90 bp CGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCCCCGAGGTGGTTGCCTaGAGTTTGGCCTGGTCGAGG +
Preference number: 2 (lower is better)
Translates to: RSPSWHASSPSRAARWPSPEVVA*SLAWSR
Trigger: CCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGG...GCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CCA 90 bp CGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGATGCCCGGCACAGCTGTaGGAGACCCCACACTGGCTT +
Preference number: 2 (lower is better)
Translates to: RVGMPAAHPGQLGGPAARCPAQL*ETPHWL
Trigger: AAGCCAGTGTGGGGTCTCCCACAGCTGTGCCGGGCA...TCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CCA 90 bp GTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGGACCCCACACTGGCTTaGGGCCCCGGAACCTCCAGC +
Preference number: 2 (lower is better)
Translates to: VLQTSGVVGLHLQSPSGQDPTLA*GPGTSS
Trigger: GCTGGAGGTTCCGGGGCCCCAAGCCAGTGTGGGGTC...CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR CAA 90 bp GTTTCTGAGGTGAGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTaGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGG +
Preference number: 2 (lower is better)
Translates to: VSEVRRCLQNRALPE*ACQQPIQGSSVAQR
Trigger: CCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCTCACCTCAGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CCA 90 bp GGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTC +
Preference number: 2 (lower is better)
Translates to: GMPAAHPGQLGGPAARGGRQTSR*RLCCPV
Trigger: GACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT...ACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CCA 90 bp TTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTGACCCCACACTGGCTTaGGGCCCCGGAACCTCCAGC +
Preference number: 2 (lower is better)
Translates to: FRTGRSPSWHASSPSRAADPTLA*GPGTSS
Trigger: GCTGGAGGTTCCGGGGCCCCAAGCCAGTGTGGGGTC...AGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CCA 90 bp TCGGGCCAGCACGTAGTAGCGGGCACCCTTGAAGAGGATGAGGCGGCGCAGAGGTGCCCGGCACAGCTGTaGGAGACCCCACACTGGCTT +
Preference number: 2 (lower is better)
Translates to: SGQHVVAGTLEEDEAAQRCPAQL*ETPHWL
Trigger: AAGCCAGTGTGGGGTCTCCCACAGCTGTGCCGGGCA...CCTCTGCGCCGCCTCATCCTCTTCAAGGGTGCCCGCTACTACGTGCTGGCCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR TCA 90 bp CAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGCATCTCGGAAGAAGATaGTGGAGCCATCGGGCCTCG +
Preference number: 2 (lower is better)
Translates to: QNRALPELACQQPIQGSSHLGRR*WSHRAS
Trigger: CGAGGCCCGATGGCTCCATCATCTTCTTCCGAGATG...CGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR GCA 90 bp ACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGAGCATCGACCCCCTCTaGTCTCCTTTAAGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: TGRSPSWHASSPSRAARWSIDPL*SPLSWS
Trigger: GCTCCAGCTTAAAGGAGAGCAGAGGGGGTCGATGCT...CCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CCA 90 bp GAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTC +
Preference number: 2 (lower is better)
Translates to: EQGAPRVGMPAAHPGQLGRQTSR*RLCCPV
Trigger: GACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT...ACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR GCA 90 bp TCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGTCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: SGVVGLHLQSPSGQHVVASRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...CGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CCA 90 bp CCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGTGCTCTCCTTTAAGCTaGAGCCCACGATGGTTGGTA +
Preference number: 2 (lower is better)
Translates to: PAARGGCLQFGLVEAPVACSPLS*SPRWLV
Trigger: TACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCA...CGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR GCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGTGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRCCPVF*RGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCA...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR GCA 90 bp TTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTTCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: FRTGRSPSWHASSPSRAASRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...AGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR GCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTTCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPSRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR CCA 90 bp TCGGGCCAGCACGTAGTAGCGGGCACCCTTGAAGAGGATGAGGCGGCGCAGAGGTGCTCTCCTTTAAGCTaGAGCCCACGATGGTTGGTA +
Preference number: 2 (lower is better)
Translates to: SGQHVVAGTLEEDEAAQRCSPLS*SPRWLV
Trigger: TACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCA...CCTCTGCGCCGCCTCATCCTCTTCAAGGGTGCCCGCTACTACGTGCTGGCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR TCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGCACCAGTTTCTGAGGTaGGGAGGTGCCTTCAGAACA +
Preference number: 2 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRHQFLR*GGAFRT
Trigger: TGTTCTGAAGGCACCTCCTCACCTCAGAAACTGGTG...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR GCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGTGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: QMEALLPGLLQRDSEASKCCPVF*RGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCA...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR GCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGATGGAGGCTTTGCTaGCCGGTCTTCTGCAGAGGG +
Preference number: 2 (lower is better)
Translates to: QMEALLPGLLQRDSEASKRWRLC*PVFCRG
Trigger: CCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCT...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR TCA 90 bp CTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: LPGLLQRDSEASKRGSAPNMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...CGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR TCA 90 bp ACCCCACAAAGGGCCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATTGGGGGTGGGGCCTCTaGCTAAATATGACACCGTTT +
Preference number: 2 (lower is better)
Translates to: TPQRASEVGDACAFIPIHWGWGL*LNMTPF
Trigger: AAACGGTGTCATATTTAGTCAGAGGCCCCACCCCCA...ATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGGCCCTTTGTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR-3UTR CCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTC +
Preference number: 2 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWRQTSR*RLCCPV
Trigger: GACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR CCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGACCCCCACCTCCATGTaGTGGGGACAGACAAAGACA +
Preference number: 2 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWTPTSM*WGQTKT
Trigger: TGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGT...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR TCA 90 bp TCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGGAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: SEVGDACAFIPIHASWGWNMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...CCACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR-3UTR GCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAAGCATCGACCCCCTCTaGTCTCCTTTAAGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: GTKADRLPDGGFAARSSASIDPL*SPLSWS
Trigger: GCTCCAGCTTAAAGGAGAGCAGAGGGGGTCGATGCT...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CCA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTC +
Preference number: 2 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCRQTSR*RLCCPV
Trigger: GACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR GCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGTCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLSRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR CCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGTTTCATCCCCCTGCTTaGATCCCAGTGCTGTTACCT +
Preference number: 2 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLFHPPA*IPVLLP
Trigger: AGGTAACAGCACTGGGATCCAAGCAGGGGGATGAAA...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR CAA 90 bp GCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTaGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: AFFKEQRQTDFQMEA*LPGLLQRDSEASKR
Trigger: CCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR TCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQNMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR GCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTGACAGACAAAGACAATaGTGCATTCTTCAAGGAACA +
Preference number: 2 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPDRQRQ*CILQGT
Trigger: TGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR GCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGAGTTTTTCATCCCCCTaGTTGGATCCCAGTGCTGTT +
Preference number: 2 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLSFSSP*LDPSAV
Trigger: AACAGCACTGGGATCCAAGCAGGGGGATGAAAAACT...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR-3UTR CCA 90 bp TCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGGCACAGTCTTGCAAAATaGTCTCGAATTTCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: SEVGDACAFIPIHASWGWHSLAK*SRISLL
Trigger: CAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTG...CCACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR-3UTR GCA 90 bp TCTGCTGAGTTTTTCATCCCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAATGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: SAEFFIPLLGSQCCYLLKCCPVF*RGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCA...TTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGGGATGAAAAACTCAGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR-3UTR GCA 90 bp CCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAGGCCTGGGGAGGATATGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: PLERNCTFSRRNKGLGRICCPVF*RGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCA...TATCCTCCCCAGGCCTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR-3UTR GCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGAGACAAAGACAATGCTaGATTCTTCAAGGAACAAAG +
Preference number: 2 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRRQRQC*ILQGTK
Trigger: CTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCT...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR TCA 90 bp CCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: PPPPCGGDRQRQCCILQGNMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...TCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR GCA 90 bp CCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTAGACAAAGACAATGCTaGATTCTTCAAGGAACAAAG +
Preference number: 2 (lower is better)
Translates to: PLRLETPVPSSPSMLPGGRQRQC*ILQGTK
Trigger: CTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCT...ACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR-3UTR CCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGCACAGTCTTGCAAAATaGTCTCGAATTTCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: QMEALLPGLLQRDSEASKHSLAK*SRISLL
Trigger: CAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTG...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR-3UTR GCA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGATCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRSRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR GCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACAGACAAAGACAATaGTGCATTCTTCAAGGAACA +
Preference number: 2 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWDRQRQ*CILQGT
Trigger: TGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR-3UTR TCA 90 bp CCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAGGCCTGGGGAGGATAAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: PLERNCTFSRRNKGLGRINMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...TATCCTCCCCAGGCCTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR-3UTR GCA 90 bp TTAGGCCGTTGTTGTTACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCAGACAAAGACAATGCTaGATTCTTCAAGGAACAAAG +
Preference number: 2 (lower is better)
Translates to: LGRCCYLHSQCRSPRTLSRQRQC*ILQGTK
Trigger: CTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCT...GGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
3UTR GCA 72 bp CCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTTaGCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCG +
Preference number: 3 (lower is better)
Translates to: PGQLGGPAARGG*LQFGLVEAPVA
Trigger: CGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR CCA 72 bp CCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTaGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGT +
Preference number: 3 (lower is better)
Translates to: PSRAARWPSGPR*LPAVWPGRGAS
Trigger: ACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CAA 90 bp CTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGGTAGTAGGGCTCCACTaGCAGTCCCCCTCGGGCCAG +
Preference number: 3 (lower is better)
Translates to: LGGPAARGGCLQFGLVEAVVGLH*QSPSGQ
Trigger: CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTAC...CGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CAA 90 bp GCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGTGGTTGCCTGCAGTTaGGCCTGGTCGAGGCGCCAG +
Preference number: 3 (lower is better)
Translates to: APRVGMPAAHPGQLGGPAVVACS*AWSRRQ
Trigger: CTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCAC...CGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR CCA 72 bp CGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTaGCCTGGTCGAGGCGCCAGTAGCGGTCATCTCGGA +
Preference number: 3 (lower is better)
Translates to: RWPSGPRWLPAV*PGRGASSGHLG
Trigger: TCCGAGATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CAA 90 bp CAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTAGTAGGGCTCCACTaGCAGTCCCCCTCGGGCCAG +
Preference number: 3 (lower is better)
Translates to: QNRALPELACQQPIQGSSVVGLH*QSPSGQ
Trigger: CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTAC...CGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CAA 90 bp GAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTAGCGGCCCGAGGTGGTaGCCTGCAGTTTGGCCTGGT +
Preference number: 3 (lower is better)
Translates to: EQGAPRVGMPAAHPGQLGSGPRW*PAVWPG
Trigger: ACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCT...ACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR GCA 72 bp AGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATaGCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: RCLQNRALPELA*QQPIQGSSVAQ
Trigger: CTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR CCA 72 bp AGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTaGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGG +
Preference number: 3 (lower is better)
Translates to: SWHASSPSRAAR*PSGPRWLPAVW
Trigger: CCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR-3UTR CAA 90 bp CGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGATTCCAGATGGAGGCTTaGCTGCCCGGTCTTCTGCAG +
Preference number: 3 (lower is better)
Translates to: RVGMPAAHPGQLGGPAARFQMEA*LPGLLQ
Trigger: CTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAA...TCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR TCA 72 bp CCTCCCACTCTGTGTCCTGACCCCACAAAGGGCCTCTaGGGTTGGAGACGCCTGTGCCTTCATCCCCATCCA +
Preference number: 3 (lower is better)
Translates to: PPTLCPDPTKGL*GWRRLCLHPHP
Trigger: TGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGGCCCTTTGTGGGGTCAGGACACAGAGTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR-3UTR CAA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGTTGCTTTTCCTAAGATaGATCCCACCCCCACCTCCA +
Preference number: 3 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRLLFLR*IPPPPP
Trigger: TGGAGGTGGGGGTGGGATCAATCTTAGGAAAAGCAA...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR TCA 72 bp ACCCACTCCTCCCGTGCCCTAGGGAAGAGAGGTTACTaGCAAAGTCCAGTCCCAGGCTCAGCTGTTTTCCTA +
Preference number: 3 (lower is better)
Translates to: THSSRALGKRGY*QSPVPGSAVFL
Trigger: TAGGAAAACAGCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCACGGGAGGAGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
3UTR-3UTR CAA 90 bp CTCCCGTGCCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGTCCCAGGCTCAGCATTGGCTTCAAGACATaGGGAAATCTTGGCCTAGCC +
Preference number: 3 (lower is better)
Translates to: LPCPREERLLTKSSPRLSIGFKT*GNLGLA
Trigger: GGCTAGGCCAAGATTTCCCAATGTCTTGAAGCCAAT...GCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCACGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
3UTR GCA 72 bp CTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTaGCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGT +
Preference number: 3 (lower is better)
Translates to: LKPRGPIHPLLP*PREERLLTKSS
Trigger: ACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
3UTR CCA 72 bp AAGTCCAGTCCCAGGCTCAGCTGTTTTCCTAGCCATTaGCTTCAAGACATTGGGAAATCTTGGCCTAGCCGG +
Preference number: 3 (lower is better)
Translates to: KSSPRLSCFPSH*LQDIGKSWPSR
Trigger: CCGGCTAGGCCAAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCCTGGGACTGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
3UTR GCA 72 bp CCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTaGATTCTTCAAGGAACAAAGGCAGACAGACTTCCA +
Preference number: 3 (lower is better)
Translates to: PPPCGGDRQRQC*ILQGTKADRLP
Trigger: TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
3UTR GCA 72 bp TCTGCTGAGTTTTTCATCCCCCTGCTTGGATCCCAGTaGTGTTACCTCTTGAAAGGAACTGTACCTTTAGCC +
Preference number: 3 (lower is better)
Translates to: SAEFFIPLLGSQ*CYLLKGTVPLA
Trigger: GGCTAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGGGATGAAAAACTCAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR GCA 72 bp GCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATaGCGATCTCCCAGAACTTTGTCCTCAGGCTTTAGC +
Preference number: 3 (lower is better)
Translates to: ASLGRCCYLHSQ*RSPRTLSSGFS
Trigger: GCTAAAGCCTGAGGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
3UTR-3UTR CAA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCATCTGGGACCCTTTTTaGCTTTTCCTAAGATTGATC +
Preference number: 3 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPIWDPF*LFLRLI
Trigger: GATCAATCTTAGGAAAAGCAAAAAAGGGTCCCAGAT...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR TCA 72 bp CAAAAGAAATGTTTATTTCCCTCTCTTAGAGACAGATaGTCCAAAGTAGGCAAGTGGCTCTGCTCCATGAAG +
Preference number: 3 (lower is better)
Translates to: QKKCLFPSLRDR*SKVGKWLCSMK
Trigger: CTTCATGGAGCAGAGCCACTTGCCTACTTTGGATCATCTGTCTCTAAGAGAGGGAAATAAACATTTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR CCA 90 bp GGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGCTGTGGGAGACTCATCTGGCGCAGGGTaGCGCGGTCCAACACGCCGC +
Preference number: 4 (lower is better)
Translates to: GRRQDGGAGPLPGTAVGDSSGAG*RGPTRR
Trigger: GCGGCGTGTTGGACCGCGCCACCCTGCGCCAGATGA...GTCTCCCACAGCTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CCTCGGCAGGGCGCCGCTGACCTCCTCAGGGATGCCTCCCCAGTCCTGCAGACTTGTAGTAGGGCGCCATaGGCGCGCGCGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PRQGAADLLRDASPVLQTCSRAP*ARAARA
Trigger: CGCCCGCGCCGCGCGCGCTCATGGCGCCCTACTACA...AGTCTGCAGGACTGGGGAGGCATCCCTGAGGAGGTCAGCGGCGCCCTGCCGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp AGGGAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGGGCTCGGGGAGCTACTaGGCGCAGGGAACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: REEEGGVRMAGQAPCPAQGSGSY*AQGTSR
Trigger: CCGGCTGGTTCCCTGCGCGCAGTAGCTCCCCGAGCC...CTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGCGCGGGCGAGTGGGTaGGGCCAAGCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: RSPSWHASSPSRAARWPSARASG*GQACDR
Trigger: TCGGTCACACGCTTGGCCTCACCCACTCGCCCGCGC...GCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTGACCCCACACTGGCTTaGGGCCCCGGAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GMPAAHPGQLGGPAARGGDPTLA*GPGTSS
Trigger: GCTGGAGGTTCCGGGGCCCCAAGCCAGTGTGGGGTC...ACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGGGGCGCTCCCCGAGTTaGCATGCCAGCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: REEEGGVRMAGQAPCPAQGRSPS*HASSPS
Trigger: GGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCC...CTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCTCATCTTGGTCGAAGTaGGCTTCGCCGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RWPSGPRWLPAVWPGRGASSWSK*ASPRRG
Trigger: GCCCCGCCGCGGCGAAGCGCACTTCGACCAAGATGA...GGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTGCGGCCCGAGGTGGTTaGCTGCAGTTTGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GMPAAHPGQLGGPAARGGAARGG*LQFGLV
Trigger: GACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGC...ACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGGGCCTAGCTGCGCGCTCTaGGCCGCTCCTCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGSRAPLAVPLGPARSSGPSCAL*AAPPLP
Trigger: GGGCAGCGGAGGAGCGGCCCAGAGCGCGCAGCTAGG...CCCGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTCCTAGCTGCGCGCTCTaGGCCGCTCCTCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EQGAPRVGMPAAHPGQLGPSCAL*AAPPLP
Trigger: GGGCAGCGGAGGAGCGGCCCAGAGCGCGCAGCTAGG...ACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGCTGGGCGTCCAGGTaGCCCCACAGTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RVGMPAAHPGQLGGPAARGWASR*PHSSSC
Trigger: GCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCC...TCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGGGCTGGGCGTCCAGGTaGCCCCACAGTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGGPAARGGCLQFGLVEAGWASR*PHSSSC
Trigger: GCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCC...CGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTTCCTTGCGCAGCTCCTaGCCTCCGCGCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: EQGAPRVGMPAAHPGQLGSLRSS*PPRSAG
Trigger: GCCCGCGGAGCGCGGAGGCCAGGAGCTGCGCAAGGA...ACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGATCATCTGGCGCAGGGTaGCGCGGTCCAACACGCCGC +
Preference number: 4 (lower is better)
Translates to: RVGMPAAHPGQLGGPAARSSGAG*RGPTRR
Trigger: GCGGCGTGTTGGACCGCGCCACCCTGCGCCAGATGA...TCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGACGGGGACGAGTCATCTaGCGCAGGGTGGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: AARWPSGPRWLPAVWPGRRGRVI*RRVARS
Trigger: GGACCGCGCCACCCTGCGCCAGATGACTCGTCCCCG...TCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGCCGCAGCCTCAATGTTaGGGGGCAGCCCGACCCATC +
Preference number: 4 (lower is better)
Translates to: REEEGGVRMAGQAPCPAQPQPQC*GAARPI
Trigger: GATGGGTCGGGCTGCCCCCCAACATTGAGGCTGCGG...CTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTCCAACACGCCGCTaGCAGGTAGCTGGGACACCC +
Preference number: 4 (lower is better)
Translates to: RVGMPAAHPGQLGGPAARGPTRR*QVAGTP
Trigger: GGGTGTCCCAGCTACCTGTCAGCGGCGTGTTGGACC...TCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp TCGGGCCAGCACGTAGTAGCGGGCACCCTTGAAGAGGATGAGGCGGCGCAGAGGGCACGTCGTCCCAGCTaGGCAGCGCGTCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SGQHVVAGTLEEDEAAQRARRPS*AARRGP
Trigger: TGGGCCGCGACGCGCTGCTCAGCTGGGACGACGTGC...CCTCTGCGCCGCCTCATCCTCTTCAAGGGTGCCCGCTACTACGTGCTGGCCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp TCGGGCCAGCACGTAGTAGCGGGCACCCTTGAAGAGGATGAGGCGGCGCAGAGGTCTCGCCGCCTCCGGTaGAGCCCGGCTCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SGQHVVAGTLEEDEAAQRSRRLR*SPARGA
Trigger: AGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGA...CCTCTGCGCCGCCTCATCCTCTTCAAGGGTGCCCGCTACTACGTGCTGGCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCGGCTCCGGCAGATaGTCAGGCCAGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: APRVGMPAAHPGQLGGPAAGSGR*SGQFTR
Trigger: CCTGGTGAACTGGCCTGAGCATCTGCCGGAGCCGGC...CGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCTCCCCGAGTTGGCATaGCAGCAGCCCATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LGGPAARGGCLQFGLVEALPELA*QQPIQG
Trigger: GCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAG...CGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GGGCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCCTCCCCGAGTTGGCATaGCAGCAGCCCATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GQLGGPAARGGCLQFGLVLPELA*QQPIQG
Trigger: GCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAG...GACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAGCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGAGCGGGGCCTGTGGCTaGGGCCTCCCAGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: PAARGGCLQFGLVEAPVASGACG*GLPELQ
Trigger: CTGGAGTTCTGGGAGGCCCCAGCCACAGGCCCCGCT...CGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGTGTCAGCGGGGCCTGTaGCTGGGGCCTCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LGGPAARGGCLQFGLVEACQRGL*LGPPRT
Trigger: AGTTCTGGGAGGCCCCAGCCACAGGCCCCGCTGACA...CGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGCCCCTTGGAAGAAGGTaGGCCGGATGTCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: PAARGGCLQFGLVEAPVAPLGRR*AGCQRG
Trigger: GCCCCGCTGACATCCGGCTCACCTTCTTCCAAGGGG...CGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp ACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCCTTGGAAGAAGGTaGGCCGGATGTCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: TGRSPSWHASSPSRAARWPLGRR*AGCQRG
Trigger: GCCCCGCTGACATCCGGCTCACCTTCTTCCAAGGGG...CCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp GCGCCAGTAGCGGTCATCTCGGAAGAAGATGATGGAGCCATCGGGCCTCGGCAGTGTAGTAGGGCGCCATaGGCGCGCGCGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: APVAVISEEDDGAIGPRQCSRAP*ARAARA
Trigger: CGCCCGCGCCGCGCGCGCTCATGGCGCCCTACTACA...CTGCCGAGGCCCGATGGCTCCATCATCTTCTTCCGAGATGACCGCTACTGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTTGTAGTAGGGCGCCATaGGCGCGCGCGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPCSRAP*ARAARA
Trigger: CGCCCGCGCCGCGCGCGCTCATGGCGCCCTACTACA...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGGGCTCGGGGAGCTACTaGGCGCAGGGAACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SGVVGLHLQSPSGQHVVAGSGSY*AQGTSR
Trigger: CCGGCTGGTTCCCTGCGCGCAGTAGCTCCCCGAGCC...CGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCCCAGCGCTGAGACGTTaGTCCACAACTGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: RWPSGPRWLPAVWPGRGAPALRR*STTGRR
Trigger: CCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGG...GGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCCGAGGTGGTTGCCTaGAGTTTGGCCTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: LGGPAARGGCLQFGLVEAPEVVA*SLAWSR
Trigger: CCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGG...CGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp AGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCTCCTTGCGCAGCTCCTaGCCTCCGCGCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: RRCLQNRALPELACQQPISLRSS*PPRSAG
Trigger: GCCCGCGGAGCGCGGAGGCCAGGAGCTGCGCAAGGA...GATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGAGCGGGGCCTGTGGCTaGGGCCTCCCAGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: QNRALPELACQQPIQGSSSGACG*GLPELQ
Trigger: CTGGAGTTCTGGGAGGCCCCAGCCACAGGCCCCGCT...CGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGGGCGCCAGGGCGCCCCCTaGGCCATCAAAGGCATTGCC +
Preference number: 4 (lower is better)
Translates to: GGSRAPLAVPLGPARSSGRQGAP*AIKGIA
Trigger: GGCAATGCCTTTGATGGCCCAGGGGGCGCCCTGGCG...CCCGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CCTCGGCAGGGCGCCGCTGACCTCCTCAGGGATGCCTCCCCAGTCCTGCAGACTCCCAGCGGCCCGAGGTaGTTGCCTGCAGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PRQGAADLLRDASPVLQTPSGPR*LPAVWP
Trigger: AGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGG...AGTCTGCAGGACTGGGGAGGCATCCCTGAGGAGGTCAGCGGCGCCCTGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp AGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCGCGCGGGCGAGTGGGTaGGGCCAAGCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: RRCLQNRALPELACQQPIARASG*GQACDR
Trigger: TCGGTCACACGCTTGGCCTCACCCACTCGCCCGCGC...GATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp AGGGATGCCTCCCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGGCACGTCGTCCCAGCTaGGCAGCGCGTCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RDASPVLQTSGVVGLHLQARRPS*AARRGP
Trigger: TGGGCCGCGACGCGCTGCTCAGCTGGGACGACGTGC...CTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGGGAGGCATCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp ACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCAGTGGACGGGGCTCTaGGACGTTGCCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TGRSPSWHASSPSRAARWQWTGL*DVAISC
Trigger: GCAGCTGATGGCAACGTCTCAGAGCCCCGTCCACTG...CCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp TCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGCCGGGGTTTCGCCAGTaGCCTAGCTGCGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGVVGLHLQSPSGQHVVAPGFRQ*PSCALW
Trigger: CCAGAGCGCGCAGCTAGGGCACTGGCGAAACCCCGG...CGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGTCTCGCCGCCTCCGGTaGAGCCCGGCTCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRSRRLR*SPARGA
Trigger: AGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGA...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCGCACCACGAACAGGTTaGGCCCGCGGCGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RRCLQNRALPELACQQPIAPRTG*ARGGGS
Trigger: TGAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGC...GATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp TCGGGCCAGCACGTAGTAGCGGGCACCCTTGAAGAGGATGAGGCGGCGCAGAGGGACCCCACACTGGCTTaGGGCCCCGGAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGQHVVAGTLEEDEAAQRDPTLA*GPGTSS
Trigger: GCTGGAGGTTCCGGGGCCCCAAGCCAGTGTGGGGTC...CCTCTGCGCCGCCTCATCCTCTTCAAGGGTGCCCGCTACTACGTGCTGGCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp AGGGATGCCTCCCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCAGGGCAGCTCGGTaGCCCAGCGGCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RDASPVLQTSGVVGLHLQSRAAR*PSGPRW
Trigger: CCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGA...CTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGGGAGGCATCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTGCGCGGGCGAGTGGGTaGGGCCAAGCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPARASG*GQACDR
Trigger: TCGGTCACACGCTTGGCCTCACCCACTCGCCCGCGC...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTGTAGTAGGGCGCCATaGGCGCGCGCGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFCSRAP*ARAARA
Trigger: CGCCCGCGCCGCGCGCGCTCATGGCGCCCTACTACA...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTTCTCGCCGCCTCCGGTaGAGCCCGGCTCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLRLETPVPSSPSMLPGGSRRLR*SPARGA
Trigger: AGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGA...ACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp GTTTCTGAGGTGAGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCTCTCGCCGCCTCCGGTaGAGCCCGGCTCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: VSEVRRCLQNRALPELACSRRLR*SPARGA
Trigger: AGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGA...GCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCTCACCTCAGAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGGCCGGCTCCGGCAGATaGTCAGGCCAGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PSPADFGGSRAPLAVPLGAGSGR*SGQFTR
Trigger: CCTGGTGAACTGGCCTGAGCATCTGCCGGAGCCGGC...CCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGCTGGGCCATCAAAGGCATTaGCCAGCCCATCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: EEEGGVRMAGQAPCPAQLGHQRH*PAHRCG
Trigger: ACCACAACGATGGGCTGGGCAATGCCTTTGATGGCC...CAGCTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGGCGGCCCGAGGTGGTTaGCTGCAGTTTGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VLQTSGVVGLHLQSPSGQAARGG*LQFGLV
Trigger: GACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGC...CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGTGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: APRVGMPAAHPGQLGGPACCPVF*RGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCA...CGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTAGCATCGACCCCCTCTaGTCTCCTTTAAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GMPAAHPGQLGGPAARGGSIDPL*SPLSWS
Trigger: GCTCCAGCTTAAAGGAGAGCAGAGGGGGTCGATGCT...ACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GGATGCCTCCCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCGGGGACGAGTCATCTaGCGCAGGGTGGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: GCLPSPADFGGSRAPLAVRGRVI*RRVARS
Trigger: GGACCGCGCCACCCTGCGCCAGATGACTCGTCCCCG...GACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGGGAGGCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp TCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGGTCCAGGGCAGCTCGGTaGCCCAGCGGCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SEVGDACAFIPIHASWGWSRAAR*PSGPRW
Trigger: CCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGA...CCACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
3UTR CAA 72 bp CCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTaGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PVLQTSGVVGLH*QSPSGQHVVAG
Trigger: GCCCGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
3UTR CAA 72 bp GTGAGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTaGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: VRRCLQNRALPE*ACQQPIQGSSV
Trigger: CACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCGCACGTCGTCCCAGCTaGGCAGCGCGTCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSAARRPS*AARRGP
Trigger: TGGGCCGCGACGCGCTGCTCAGCTGGGACGACGTGC...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGGGCCAGCGCTGAGACGTTaGTCCACAACTGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: GGSRAPLAVPLGPARSSGPALRR*STTGRR
Trigger: CCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGG...CCCGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTGGCTGGGCGTCCAGGTaGCCCCACAGTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPGWASR*PHSSSC
Trigger: GCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCC...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTTCATCTGGCGCAGGGTaGCGCGGTCCAACACGCCGC +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPSSGAG*RGPTRR
Trigger: GCGGCGTGTTGGACCGCGCCACCCTGCGCCAGATGA...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGACGTTGCTCCACAACTaGAAGGCGGCGCGCACGGCG +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGTLLHN*KAARTA
Trigger: CGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGT...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCTCGGCAGGGCGCCGCTGACCTCCTCAGGGATGCCTCCCCAGTCCTGCAGACTCCCAGCCCATCGTTGTaGTCCCCTTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PRQGAADLLRDASPVLQTPSPSL*SPWKKV
Trigger: CACCTTCTTCCAAGGGGACCACAACGATGGGCTGGG...AGTCTGCAGGACTGGGGAGGCATCCCTGAGGAGGTCAGCGGCGCCCTGCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGACCAGCGCTCATCTTaGTCGAAGTGCGCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: EQGAPRVGMPAAHPGQLGDQRSS*SKCASP
Trigger: CGGCGAAGCGCACTTCGACCAAGATGAGCGCTGGTC...ACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGAGCTTTCCTGGGAGCTaGACGGCCACTGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PSPADFGGSRAPLAVPLGSFPGS*TATEPP
Trigger: AGGGGGCTCAGTGGCCGTCCAGCTCCCAGGAAAGCT...CCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGCTGGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EEEGGVRMAGQAPCPAQLASKEE*QYLGPC
Trigger: GCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGC...CAGCTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp AGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCCCAGCGGCCCGAGGTaGTTGCCTGCAGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RRCLQNRALPELACQQPIPSGPR*LPAVWP
Trigger: AGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGG...GATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp ACCCCACAAAGGGCCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATTCCAGGGCAGCTCGGTaGCCCAGCGGCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TPQRASEVGDACAFIPIHSRAAR*PSGPRW
Trigger: CCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGA...ATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGGCCCTTTGTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTCCAGGGCAGCTCGGTaGCCCAGCGGCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFSRAAR*PSGPRW
Trigger: CCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGA...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGGCGCTCCCCGAGTTaGCATGCCAGCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRGRSPS*HASSPS
Trigger: GGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCC...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: LGGPAARGGCLQFGLVEARQTSR*RLCCPV
Trigger: GACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT...CGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp AGGGATGCCTCCCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGGGTCCAACACGCCGCTaGCAGGTAGCTGGGACACCC +
Preference number: 4 (lower is better)
Translates to: RDASPVLQTSGVVGLHLQGPTRR*QVAGTP
Trigger: GGGTGTCCCAGCTACCTGTCAGCGGCGTGTTGGACC...CTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGGGAGGCATCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCGCGCGGGCGAGTGGGTaGGGCCAAGCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSAARASG*GQACDR
Trigger: TCGGTCACACGCTTGGCCTCACCCACTCGCCCGCGC...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGGCACGTCGTCCCAGCTaGGCAGCGCGTCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQARRPS*AARRGP
Trigger: TGGGCCGCGACGCGCTGCTCAGCTGGGACGACGTGC...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGCACGTCGTCCCAGCTaGGCAGCGCGTCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: QTDFQMEALLPGLLQRDSARRPS*AARRGP
Trigger: TGGGCCGCGACGCGCTGCTCAGCTGGGACGACGTGC...TGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCCACCAGTTTCTGAGGTaGGGAGGTGCCTTCAGAACA +
Preference number: 4 (lower is better)
Translates to: RSPSWHASSPSRAARWPSHQFLR*GGAFRT
Trigger: TGTTCTGAAGGCACCTCCTCACCTCAGAAACTGGTG...GCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CTCCCGTGCCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGTCCCAGGCTCAGCGGGATGGGACTGCTCTaGGCCGCCCCCGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: LPCPREERLLTKSSPRLSGMGLL*AAPARR
Trigger: TCTCCGTGCGGGGGCGGCGCAGAGCAGTCCCATCCC...GCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCACGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCGGCTCGGGGAGCTACTaGGCGCAGGGAACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSAGSGSY*AQGTSR
Trigger: CCGGCTGGTTCCCTGCGCGCAGTAGCTCCCCGAGCC...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCCTAGGGAAGAGGGCTCGGGGAGCTACTaGGCGCAGGGAACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: VLKPRGPIHPLLPCPREEGSGSY*AQGTSR
Trigger: CCGGCTGGTTCCCTGCGCGCAGTAGCTCCCCGAGCC...CTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp GTTTCTGAGGTGAGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCCCCACAGTAGCAGCTaGAGGGCGCGCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VSEVRRCLQNRALPELACPHSSS*RARSRR
Trigger: CCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGG...GCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCTCACCTCAGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGCCGGCTCCGGCAGATaGTCAGGCCAGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: LPGLLQRDSEASKRGSAPAGSGR*SGQFTR
Trigger: CCTGGTGAACTGGCCTGAGCATCTGCCGGAGCCGGC...CGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGTCATCTTGGTCGAAGTaGGCTTCGCCGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LPGLLQRDSEASKRGSAPSSWSK*ASPRRG
Trigger: GCCCCGCCGCGGCGAAGCGCACTTCGACCAAGATGA...CGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTTCATCTTGGTCGAAGTaGGCTTCGCCGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPSSWSK*ASPRRG
Trigger: GCCCCGCCGCGGCGAAGCGCACTTCGACCAAGATGA...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCGCACCACGAACAGGTTaGGCCCGCGGCGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFAPRTG*ARGGGS
Trigger: TGAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGC...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTGCGGCCCGAGGTGGTTaGCTGCAGTTTGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPAARGG*LQFGLV
Trigger: GACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGC...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTCTCCCCGAGTTGGCATaGCAGCAGCCCATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPLPELA*QQPIQG
Trigger: GCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAG...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGCTCCCCGAGTTGGCATaGCAGCAGCCCATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRLPELA*QQPIQG
Trigger: GCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAG...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGTCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PAARGGCLQFGLVEAPVASRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...CGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGTCCTTGCGCAGCTCCTaGCCTCCGCGCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLSLRSS*PPRSAG
Trigger: GCCCGCGGAGCGCGGAGGCCAGGAGCTGCGCAAGGA...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CTCCCGTGCCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGTCCCAGGCTCAGCCGGGGACGAGTCATCTaGCGCAGGGTGGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LPCPREERLLTKSSPRLSRGRVI*RRVARS
Trigger: GGACCGCGCCACCCTGCGCCAGATGACTCGTCCCCG...GCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCACGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGACGTTGCTCCACAACTaGAAGGCGGCGCGCACGGCG +
Preference number: 4 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRTLLHN*KAARTA
Trigger: CGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGT...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCTCGGCAGGGCGCCGCTGACCTCCTCAGGGATGCCTCCCCAGTCCTGCAGACTTCGTTGTGGTCCCCTTaGAAGAAGGTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: PRQGAADLLRDASPVLQTSLWSP*KKVSRM
Trigger: CATCCGGCTCACCTTCTTCCAAGGGGACCACAACGA...AGTCTGCAGGACTGGGGAGGCATCCCTGAGGAGGTCAGCGGCGCCCTGCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGAGCTTTCCTGGGAGCTaGACGGCCACTGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGSFPGS*TATEPP
Trigger: AGGGGGCTCAGTGGCCGTCCAGCTCCCAGGAAAGCT...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RSPSWHASSPSRAARWPSASKEE*QYLGPC
Trigger: GCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGC...GCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGCCGCAGCCTCAATGTTaGGGGGCAGCCCGACCCATC +
Preference number: 4 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRPQPQC*GAARPI
Trigger: GATGGGTCGGGCTGCCCCCCAACATTGAGGCTGCGG...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGACCCCACACTGGCTTaGGGCCCCGGAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLRLETPVPSSPSMLPGGDPTLA*GPGTSS
Trigger: GCTGGAGGTTCCGGGGCCCCAAGCCAGTGTGGGGTC...ACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp CCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGTGGTTGCCTGCAGTTTaGCCTGGTCGAGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: PSPADFGGSRAPLAVPLGWLPAV*PGRGAS
Trigger: ACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCA...CCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp AGGGAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGTGGGGACCTGTTCATTaGGGTATCCGTACTTCTCTA +
Preference number: 4 (lower is better)
Translates to: REEEGGVRMAGQAPCPAQWGPVH*GIRTSL
Trigger: TAGAGAAGTACGGATACCTCAATGAACAGGTCCCCA...CTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGGCGCGGGCGAGTGGGTaGGGCCAAGCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLARASG*GQACDR
Trigger: TCGGTCACACGCTTGGCCTCACCCACTCGCCCGCGC...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGCAGTGGACGGGGCTCTaGGACGTTGCCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPGLLQRDSEASKRGSAPQWTGL*DVAISC
Trigger: GCAGCTGATGGCAACGTCTCAGAGCCCCGTCCACTG...CGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCATCTCGGAAGAAGATaGTGGAGCCATCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PSPADFGGSRAPLAVPLGHLGRR*WSHRAS
Trigger: CGAGGCCCGATGGCTCCATCATCTTCTTCCGAGATG...CCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGGGATGGGACTGCTCTaGGCCGCCCCCGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: QTDFQMEALLPGLLQRDSGMGLL*AAPARR
Trigger: TCTCCGTGCGGGGGCGGCGCAGAGCAGTCCCATCCC...TGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGGGCTCGGGGAGCTACTaGGCGCAGGGAACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQGSGSY*AQGTSR
Trigger: CCGGCTGGTTCCCTGCGCGCAGTAGCTCCCCGAGCC...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCCTAGGGAAGAGAGGTTACGGCTCGGGGAGCTACTaGGCGCAGGGAACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SQEVLFTHSSRALGKRGYGSGSY*AQGTSR
Trigger: CCGGCTGGTTCCCTGCGCGCAGTAGCTCCCCGAGCC...GTAACCTCTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCCCACAGTAGCAGCTaGAGGGCGCGCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSAPHSSS*RARSRR
Trigger: CCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGG...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCCTAGGGAAGAGCCCCACAGTAGCAGCTaGAGGGCGCGCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLKPRGPIHPLLPCPREEPHSSS*RARSRR
Trigger: CCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGG...CTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGCCAGCGCTGAGACGTTaGTCCACAACTGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGPALRR*STTGRR
Trigger: CCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGG...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TCGGGCCAGCACGTAGTAGCGGGCACCCTTGAAGAGGATGAGGCGGCGCAGAGGTGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SGQHVVAGTLEEDEAAQRCCPVF*RGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCA...CCTCTGCGCCGCCTCATCCTCTTCAAGGGTGCCCGCTACTACGTGCTGGCCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp TCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGAGATGGAGGCTTTGCTaGCCGGTCTTCTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SGVVGLHLQSPSGQHVVARWRLC*PVFCRG
Trigger: CCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCT...CGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGGGTCGTTGTGGTCCCCTTaGAAGAAGGTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: GGSRAPLAVPLGPARSSGSLWSP*KKVSRM
Trigger: CATCCGGCTCACCTTCTTCCAAGGGGACCACAACGA...CCCGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCCGCCAGGGCGCCCCCTaGGCCATCAAAGGCATTGCC +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFRQGAP*AIKGIA
Trigger: GGCAATGCCTTTGATGGCCCAGGGGGCGCCCTGGCG...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGGTCATCTCGGAAGAAGACGCCAGGGCGCCCCCTaGGCCATCAAAGGCATTGCC +
Preference number: 4 (lower is better)
Translates to: LPAVWPGRGASSGHLGRRRQGAP*AIKGIA
Trigger: GGCAATGCCTTTGATGGCCCAGGGGGCGCCCTGGCG...TCTTCTTCCGAGATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGGTCATCTCGGAAGAACCGCAGCCTCAATGTTaGGGGGCAGCCCGACCCATC +
Preference number: 4 (lower is better)
Translates to: GCLQFGLVEAPVAVISEEPQPQC*GAARPI
Trigger: GATGGGTCGGGCTGCCCCCCAACATTGAGGCTGCGG...TTCTTCCGAGATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCTCCAGGGCAGCTCGGTaGCCCAGCGGCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCSRAAR*PSGPRW
Trigger: CCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGA...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACGGGCGCTCCCCGAGTTaGCATGCCAGCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDGRSPS*HASSPS
Trigger: GGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCC...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCGGTCCAACACGCCGCTaGCAGGTAGCTGGGACACCC +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFGPTRR*QVAGTP
Trigger: GGGTGTCCCAGCTACCTGTCAGCGGCGTGTTGGACC...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CCTCGGCAGGGCGCCGCTGACCTCCTCAGGGATGCCTCCCCAGTCCTGCAGACTGTTGCCTGTCTACAGTaGTGGCATCGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PRQGAADLLRDASPVLQTVACLQ*WHRRKS
Trigger: ACTCTTCCTTCGATGCCATCACTGTAGACAGGCAAC...AGTCTGCAGGACTGGGGAGGCATCCCTGAGGAGGTCAGCGGCGCCCTGCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RVGMPAAHPGQLGGPAARNMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...TCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTCCCACAAAGGGCCTCTaGGGTTGGAGACGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PLRLETPVPSSPSMLPGGPTKGL*GWRRLC
Trigger: GCACAGGCGTCTCCAACCTCAGAGGCCCTTTGTGGG...ACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGCCGGGGTTTCGCCAGTaGCCTAGCTGCGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQPGFRQ*PSCALW
Trigger: CCAGAGCGCGCAGCTAGGGCACTGGCGAAACCCCGG...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGGGATGGGACTGCTCTaGGCCGCCCCCGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSAGMGLL*AAPARR
Trigger: TCTCCGTGCGGGGGCGGCGCAGAGCAGTCCCATCCC...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGTCTCGCCGCCTCCGGTaGAGCCCGGCTCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLSRRLR*SPARGA
Trigger: AGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGA...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGCCCCACAGTAGCAGCTaGAGGGCGCGCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWPHSSS*RARSRR
Trigger: CCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGG...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCATCTTGGTCGAAGTaGGCTTCGCCGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDSSWSK*ASPRRG
Trigger: GCCCCGCCGCGGCGAAGCGCACTTCGACCAAGATGA...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTCATCTTGGTCGAAGTaGGCTTCGCCGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFSSWSK*ASPRRG
Trigger: GCCCCGCCGCGGCGAAGCGCACTTCGACCAAGATGA...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGCACCACGAACAGGTTaGGCCCGCGGCGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSAAPRTG*ARGGGS
Trigger: TGAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGC...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGTTCCCATACAGGCTCTaGACGGCCAGCACGTCGTCC +
Preference number: 4 (lower is better)
Translates to: LPGLLQRDSEASKRGSAPFPYRL*TASTSS
Trigger: GGACGACGTGCTGGCCGTGCAGAGCCTGTATGGGAA...CGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCAGTATTTAGGGCCCTaGGTTTCAGGGCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSPADFGGSRAPLAVPLGQYLGP*VSGRLP
Trigger: AGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTG...CCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GGATGCCTCCCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCGACCCATCTTTCCTaGAGTGGACGGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GCLPSPADFGGSRAPLAVPTHLS*SGRGSE
Trigger: CTCAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGG...GACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGGGAGGCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGTCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PSPADFGGSRAPLAVPLGSRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...CCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGAGCATCGACCCCCTCTaGTCTCCTTTAAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSPADFGGSRAPLAVPLGSIDPL*SPLSWS
Trigger: GCTCCAGCTTAAAGGAGAGCAGAGGGGGTCGATGCT...CCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp TTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCCTAGCTGCGCGCTCTaGGCCGCTCCTCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FTIMVLKPRGPIHPLLPCPSCAL*AAPPLP
Trigger: GGGCAGCGGAGGAGCGGCCCAGAGCGCGCAGCTAGG...GCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGTCCTTGCGCAGCTCCTaGCCTCCGCGCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKSLRSS*PPRSAG
Trigger: GCCCGCGGAGCGCGGAGGCCAGGAGCTGCGCAAGGA...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGTCCTTGCGCAGCTCCTaGCCTCCGCGCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLSLRSS*PPRSAG
Trigger: GCCCGCGGAGCGCGGAGGCCAGGAGCTGCGCAAGGA...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACACGTTGCTCCACAACTaGAAGGCGGCGCGCACGGCG +
Preference number: 4 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDTLLHN*KAARTA
Trigger: CGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGT...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAAGCGGGGCCTGTGGCTaGGGCCTCCCAGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: QTDFQMEALLPGLLQRDSSGACG*GLPELQ
Trigger: CTGGAGTTCTGGGAGGCCCCAGCCACAGGCCCCGCT...TGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCTGTCAGCGGGGCCTGTaGCTGGGGCCTCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSACQRGL*LGPPRT
Trigger: AGTTCTGGGAGGCCCCAGCCACAGGCCCCGCTGACA...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGCCCAGCCCATCGTTGTaGTCCCCTTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGPSPSL*SPWKKV
Trigger: CACCTTCTTCCAAGGGGACCACAACGATGGGCTGGG...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCCACACTGGCTTaGGGCCCCGGAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWDPTLA*GPGTSS
Trigger: GCTGGAGGTTCCGGGGCCCCAAGCCAGTGTGGGGTC...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGGACCCCACACTGGCTTaGGGCCCCGGAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKDPTLA*GPGTSS
Trigger: GCTGGAGGTTCCGGGGCCCCAAGCCAGTGTGGGGTC...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GTTTCTGAGGTGAGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCTGCCCGGCACAGCTGTaGGAGACCCCACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: VSEVRRCLQNRALPELACCPAQL*ETPHWL
Trigger: AAGCCAGTGTGGGGTCTCCCACAGCTGTGCCGGGCA...GCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCTCACCTCAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCCAGCGGCCCGAGGTaGTTGCCTGCAGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSAPSGPR*LPAVWP
Trigger: AGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGG...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGGGCGCTCCCCGAGTTaGCATGCCAGCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWGRSPS*HASSPS
Trigger: GGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCC...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AGGGAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGAGCTGGAGCCCACGATaGTTGGTATTCATATCAATC +
Preference number: 4 (lower is better)
Translates to: REEEGGVRMAGQAPCPAQSWSPR*LVFISI
Trigger: GATTGATATGAATACCAACCATCGTGGGCTCCAGCT...CTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp ACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGTGGGGACCTGTTCATTaGGGTATCCGTACTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TGRSPSWHASSPSRAARWWGPVH*GIRTSL
Trigger: TAGAGAAGTACGGATACCTCAATGAACAGGTCCCCA...CCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGGGAGCTGGGACACCCACTaGAACGCTCTGATGGCATCG +
Preference number: 4 (lower is better)
Translates to: LRLETPVPSSPSMLPGGGSWDTH*NALMAS
Trigger: CGATGCCATCAGAGCGTTTCAGTGGGTGTCCCAGCT...CCCACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp GGATGCCTCCCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCAGCTGGGACACCCACTaGAACGCTCTGATGGCATCG +
Preference number: 4 (lower is better)
Translates to: GCLPSPADFGGSRAPLAVSWDTH*NALMAS
Trigger: CGATGCCATCAGAGCGTTTCAGTGGGTGTCCCAGCT...GACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGGGAGGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGGTCCAACACGCCGCTaGCAGGTAGCTGGGACACCC +
Preference number: 4 (lower is better)
Translates to: QTDFQMEALLPGLLQRDSGPTRR*QVAGTP
Trigger: GGGTGTCCCAGCTACCTGTCAGCGGCGTGTTGGACC...TGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGCCAGAACTCCAGCGCTaGGACGTTGCTCCACAACTG +
Preference number: 4 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRPELQR*DVAPQL
Trigger: CAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGG...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp TTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGGTCATCTCGGAAGAAGACAGTGGACGGGGCTCTaGGACGTTGCCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPAVWPGRGASSGHLGRRQWTGL*DVAISC
Trigger: GCAGCTGATGGCAACGTCTCAGAGCCCCGTCCACTG...TCTTCTTCCGAGATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp GGATGCCTCCCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCATCTCGGAAGAAGATaGTGGAGCCATCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GCLPSPADFGGSRAPLAVHLGRR*WSHRAS
Trigger: CGAGGCCCGATGGCTCCATCATCTTCTTCCGAGATG...GACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGGGAGGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGAGTGGCTCTGCTCCATaGAGTTCTCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRSGSAP*SSPGTR
Trigger: CCGAGTGCCTGGAGAACTTCATGGAGCAGAGCCACT...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR GCA 90 bp CCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAGGGATGGGACTGCTCTaGGCCGCCCCCGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: PPPPCGGDRQRQCCILQGGMGLL*AAPARR
Trigger: TCTCCGTGCGGGGGCGGCGCAGAGCAGTCCCATCCC...TCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGTCCAGTCCCAGGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGATCTCGCCGCCTCCGGTaGAGCCCGGCTCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPVPGSAVFLAIGFKTLGSRRLR*SPARGA
Trigger: AGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGA...TCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCCTGGGACTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGGACGTTGCCATCAGCTaGCACCTCCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGDVAIS*HLPEMA
Trigger: AGCCATTTCTGGGAGGTGGCAGCTGATGGCAACGTC...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGGTCATCTCGGAAGAAGACCCGAGGTGGTTGCCTaGAGTTTGGCCTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: LPAVWPGRGASSGHLGRRPEVVA*SLAWSR
Trigger: CCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGG...TCTTCTTCCGAGATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGCGGCCCGAGGTGGTTaGCTGCAGTTTGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWAARGG*LQFGLV
Trigger: GACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGC...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGGGGGTTGGAGACGCCTGTaGCTTCATCCCCATCCATGC +
Preference number: 4 (lower is better)
Translates to: LRLETPVPSSPSMLPGGGGWRRL*LHPHPC
Trigger: GCATGGATGGGGATGAAGGCACAGGCGTCTCCAACC...CCCACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTGGCTGGGCGTCCAGGTaGCCCCACAGTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSGWASR*PHSSSC
Trigger: GCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCC...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCATCATCTGGCGCAGGGTaGCGCGGTCCAACACGCCGC +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSASSGAG*RGPTRR
Trigger: GCGGCGTGTTGGACCGCGCCACCCTGCGCCAGATGA...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCGGGGACGAGTCATCTaGCGCAGGGTGGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: FTIMVLKPRGPIHPLLPCRGRVI*RRVARS
Trigger: GGACCGCGCCACCCTGCGCCAGATGACTCGTCCCCG...GCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGCGGGGACGAGTCATCTaGCGCAGGGTGGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKRGRVI*RRVARS
Trigger: GGACCGCGCCACCCTGCGCCAGATGACTCGTCCCCG...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGTCGTTGTGGTCCCCTTaGAAGAAGGTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGSLWSP*KKVSRM
Trigger: CATCCGGCTCACCTTCTTCCAAGGGGACCACAACGA...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGATGCCTCCCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCAGCCCATCGTTGTaGTCCCCTTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GCLPSPADFGGSRAPLAVPSPSL*SPWKKV
Trigger: CACCTTCTTCCAAGGGGACCACAACGATGGGCTGGG...GACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGGGAGGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCACGCCAGGGCGCCCCCTaGGCCATCAAAGGCATTGCC +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSARQGAP*AIKGIA
Trigger: GGCAATGCCTTTGATGGCCCAGGGGGCGCCCTGGCG...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGGTCATCTCGGAAGAAGACCAGCGCTCATCTTaGTCGAAGTGCGCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: GCLQFGLVEAPVAVISEEDQRSS*SKCASP
Trigger: CGGCGAAGCGCACTTCGACCAAGATGAGCGCTGGTC...TTCTTCCGAGATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCAGCTTTCCTGGGAGCTaGACGGCCACTGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSASFPGS*TATEPP
Trigger: AGGGGGCTCAGTGGCCGTCCAGCTCCCAGGAAAGCT...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGCCGCAGCCTCAATGTTaGGGGGCAGCCCGACCCATC +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKPQPQC*GAARPI
Trigger: GATGGGTCGGGCTGCCCCCCAACATTGAGGCTGCGG...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGCCGCAGCCTCAATGTTaGGGGGCAGCCCGACCCATC +
Preference number: 4 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQPQPQC*GAARPI
Trigger: GATGGGTCGGGCTGCCCCCCAACATTGAGGCTGCGG...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGCCCAGCGGCCCGAGGTaGTTGCCTGCAGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKPSGPR*LPAVWP
Trigger: AGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGG...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCACCCCTTGGAAGAAGGTaGGCCGGATGTCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSAPLGRR*AGCQRG
Trigger: GCCCCGCTGACATCCGGCTCACCTTCTTCCAAGGGG...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GGATGCCTCCCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCAGCACCACCAGTTTCTaGGGTGAGGAGGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GCLPSPADFGGSRAPLAVSTTSF*GEEVPS
Trigger: TGAAGGCACCTCCTCACCTCAGAAACTGGTGGTGCT...GACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGGGAGGCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTTCTCGGCCCACCAGCTaGAGGCACCTCTTTATTCCA +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPSRPTS*RHLFIP
Trigger: TGGAATAAAGAGGTGCCTTCAGCTGGTGGGCCGAGA...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp AGGGAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGTTTGTTACCTTGCTTTaGAAAGCGTTTCTTACGCCT +
Preference number: 4 (lower is better)
Translates to: REEEGGVRMAGQAPCPAQFVTLL*KAFLTP
Trigger: AGGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAA...CTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCCCAGCGCTGAGACGTTaGTCCACAACTGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFPALRR*STTGRR
Trigger: CCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGG...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGCCATCAAAGGCATTaGCCAGCCCATCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRGHQRH*PAHRCG
Trigger: ACCACAACGATGGGCTGGGCAATGCCTTTGATGGCC...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGCCATCAAAGGCATTaGCCAGCCCATCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LPGLLQRDSEASKRGSAPGHQRH*PAHRCG
Trigger: ACCACAACGATGGGCTGGGCAATGCCTTTGATGGCC...CGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACCCGACCCATCTTTCCTaGAGTGGACGGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDPTHLS*SGRGSE
Trigger: CTCAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGG...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGGTCATCTCGGAAGAAGACCGACCCATCTTTCCTaGAGTGGACGGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LPAVWPGRGASSGHLGRRPTHLS*SGRGSE
Trigger: CTCAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGG...TCTTCTTCCGAGATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTGCGGCCCGAGGTGGTTaGCTGCAGTTTGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSAARGG*LQFGLV
Trigger: GACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGC...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAGGCTGGGCGTCCAGGTaGCCCCACAGTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPPPCGGDRQRQCCILQGGWASR*PHSSSC
Trigger: GCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCC...TCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCTCATCTGGCGCAGGGTaGCGCGGTCCAACACGCCGC +
Preference number: 4 (lower is better)
Translates to: FTIMVLKPRGPIHPLLPCSSGAG*RGPTRR
Trigger: GCGGCGTGTTGGACCGCGCCACCCTGCGCCAGATGA...GCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGTCATCTGGCGCAGGGTaGCGCGGTCCAACACGCCGC +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLSSGAG*RGPTRR
Trigger: GCGGCGTGTTGGACCGCGCCACCCTGCGCCAGATGA...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAAGGAACTGTACCTTTAGCCCGGGGACGAGTCATCTaGCGCAGGGTGGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: PLLGSQCCYLLKGTVPLARGRVI*RRVARS
Trigger: GGACCGCGCCACCCTGCGCCAGATGACTCGTCCCCG...GGCTAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGAGCGGGGCCTGTGGCTaGGGCCTCCCAGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLSGACG*GLPELQ
Trigger: CTGGAGTTCTGGGAGGCCCCAGCCACAGGCCCCGCT...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCATGTCAGCGGGGCCTGTaGCTGGGGCCTCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSACQRGL*LGPPRT
Trigger: AGTTCTGGGAGGCCCCAGCCACAGGCCCCGCTGACA...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACGACCAGCGCTCATCTTaGTCGAAGTGCGCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDDQRSS*SKCASP
Trigger: CGGCGAAGCGCACTTCGACCAAGATGAGCGCTGGTC...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGCTTTCCTGGGAGCTaGACGGCCACTGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKSFPGS*TATEPP
Trigger: AGGGGGCTCAGTGGCCGTCCAGCTCCCAGGAAAGCT...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGCTTTCCTGGGAGCTaGACGGCCACTGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQSFPGS*TATEPP
Trigger: AGGGGGCTCAGTGGCCGTCCAGCTCCCAGGAAAGCT...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGGACCCCACACTGGCTTaGGGCCCCGGAACCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLDPTLA*GPGTSS
Trigger: GCTGGAGGTTCCGGGGCCCCAAGCCAGTGTGGGGTC...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGTGCCCGGCACAGCTGTaGGAGACCCCACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKCPAQL*ETPHWL
Trigger: AAGCCAGTGTGGGGTCTCCCACAGCTGTGCCGGGCA...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGTGCCCGGCACAGCTGTaGGAGACCCCACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQCPAQL*ETPHWL
Trigger: AAGCCAGTGTGGGGTCTCCCACAGCTGTGCCGGGCA...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGGGGCGCTCCCCGAGTTaGCATGCCAGCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLGRSPS*HASSPS
Trigger: GGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCC...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCAGCTGGGACACCCACTaGAACGCTCTGATGGCATCG +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFSWDTH*NALMAS
Trigger: CGATGCCATCAGAGCGTTTCAGTGGGTGTCCCAGCT...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp TTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCGGTCCAACACGCCGCTaGCAGGTAGCTGGGACACCC +
Preference number: 4 (lower is better)
Translates to: FTIMVLKPRGPIHPLLPCGPTRR*QVAGTP
Trigger: GGGTGTCCCAGCTACCTGTCAGCGGCGTGTTGGACC...GCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR TCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCCCAGAACTCCAGCGCTaGGACGTTGCTCCACAACTG +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFPELQR*DVAPQL
Trigger: CAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGG...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGATGTAGTAGGGCGCCATaGGCGCGCGCGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRCSRAP*ARAARA
Trigger: CGCCCGCGCCGCGCGCGCTCATGGCGCCCTACTACA...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp TCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGATCTCCATCATTCAATaGCACTGCCGCAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: SGVVGLHLQSPSGQHVVAISIIQ*HCRSLN
Trigger: ATTGAGGCTGCGGCAGTGTCATTGAATGATGGAGAT...CGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCCATCTCGGAAGAAGATaGTGGAGCCATCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFHLGRR*WSHRAS
Trigger: CGAGGCCCGATGGCTCCATCATCTTCTTCCGAGATG...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GCGCCAGTAGCGGTCATCTCGGAAGAAGATGATGGAGCCATCGGGCCTCGGCAGCACCAGTTTCTGAGGTaGGGAGGTGCCTTCAGAACA +
Preference number: 4 (lower is better)
Translates to: APVAVISEEDDGAIGPRQHQFLR*GGAFRT
Trigger: TGTTCTGAAGGCACCTCCTCACCTCAGAAACTGGTG...CTGCCGAGGCCCGATGGCTCCATCATCTTCTTCCGAGATGACCGCTACTGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp GTTTCTGAGGTGAGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCAGCACCACCAGTTTCTaGGGTGAGGAGGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VSEVRRCLQNRALPELACSTTSF*GEEVPS
Trigger: TGAAGGCACCTCCTCACCTCAGAAACTGGTGGTGCT...GCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCTCACCTCAGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGATCTCGCCGCCTCCGGTaGAGCCCGGCTCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRSRRLR*SPARGA
Trigger: AGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGA...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGAAATCTTGGCCTATCTCGCCGCCTCCGGTaGAGCCCGGCTCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GSAVFLAIGFKTLGNLGLSRRLR*SPARGA
Trigger: AGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGA...TAGGCCAAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp GACCCCCTCTGCTCTCCTTTAAGCTGGAGCCCACGATGGTTGGTATTCATATCACCCCACAGTAGCAGCTaGAGGGCGCGCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DPLCSPLSWSPRWLVFISPHSSS*RARSRR
Trigger: CCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGG...TGATATGAATACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCAGAGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGTTTGTTACCTTGCTTTaGAAAGCGTTTCTTACGCCT +
Preference number: 4 (lower is better)
Translates to: LGGPAARGGCLQFGLVEAFVTLL*KAFLTP
Trigger: AGGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAA...CGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGCCGGCTCCGGCAGATaGTCAGGCCAGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKAGSGR*SGQFTR
Trigger: CCTGGTGAACTGGCCTGAGCATCTGCCGGAGCCGGC...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCACCAGCGCTGAGACGTTaGTCCACAACTGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: QTDFQMEALLPGLLQRDSPALRR*STTGRR
Trigger: CCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGG...TGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGTTCCCATACAGGCTCTaGACGGCCAGCACGTCGTCC +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKFPYRL*TASTSS
Trigger: GGACGACGTGCTGGCCGTGCAGAGCCTGTATGGGAA...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTCAGTATTTAGGGCCCTaGGTTTCAGGGCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLRLETPVPSSPSMLPGGQYLGP*VSGRLP
Trigger: AGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTG...ACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGCCGACCCATCTTTCCTaGAGTGGACGGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKPTHLS*SGRGSE
Trigger: CTCAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGG...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTCCCGAGGTGGTTGCCTaGAGTTTGGCCTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSPEVVA*SLAWSR
Trigger: CCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGG...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFCCPVF*RGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCA...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAGGCCTGGGGAGGATACCTAGCTGCGCGCTCTaGGCCGCTCCTCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PLERNCTFSRRNKGLGRIPSCAL*AAPPLP
Trigger: GGGCAGCGGAGGAGCGGCCCAGAGCGCGCAGCTAGG...TATCCTCCCCAGGCCTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGCCTAGCTGCGCGCTCTaGGCCGCTCCTCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQPSCAL*AAPPLP
Trigger: GGGCAGCGGAGGAGCGGCCCAGAGCGCGCAGCTAGG...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGGGCTGGGCGTCCAGGTaGCCCCACAGTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VFTIMVLKPRGPIHPLLPGWASR*PHSSSC
Trigger: GCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCC...CGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp GTCCCAGGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGAAATCTTTCCTTGCGCAGCTCCTaGCCTCCGCGCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: VPGSAVFLAIGFKTLGNLSLRSS*PPRSAG
Trigger: GCCCGCGGAGCGCGGAGGCCAGGAGCTGCGCAAGGA...AAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGATCCTTGCGCAGCTCCTaGCCTCCGCGCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRSLRSS*PPRSAG
Trigger: GCCCGCGGAGCGCGGAGGCCAGGAGCTGCGCAAGGA...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGAAATCTTGGCCTATCCTTGCGCAGCTCCTaGCCTCCGCGCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: GSAVFLAIGFKTLGNLGLSLRSS*PPRSAG
Trigger: GCCCGCGGAGCGCGGAGGCCAGGAGCTGCGCAAGGA...TAGGCCAAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGACGTTGCTCCACAACTaGAAGGCGGCGCGCACGGCG +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLTLLHN*KAARTA
Trigger: CGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGT...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGTGGTTGCCTGCAGTTTaGCCTGGTCGAGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWWLPAV*PGRGAS
Trigger: ACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCA...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCCCAGCGGCCCGAGGTaGTTGCCTGCAGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLPSGPR*LPAVWP
Trigger: AGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGG...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGTCCAGGGCAGCTCGGTaGCCCAGCGGCCCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQSRAAR*PSGPRW
Trigger: CCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGA...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAAGGAACTGTACCTTTAGCCGGGCGCTCCCCGAGTTaGCATGCCAGCAGCCCATCC +
Preference number: 4 (lower is better)
Translates to: PLLGSQCCYLLKGTVPLAGRSPS*HASSPS
Trigger: GGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCC...GGCTAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp TCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGGAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: SEVGDACAFIPIHASWGWRQTSR*RLCCPV
Trigger: GACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT...CCACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGTTTCATCCCCCTGCTTaGATCCCAGTGCTGTTACCT +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGFHPPA*IPVLLP
Trigger: AGGTAACAGCACTGGGATCCAAGCAGGGGGATGAAA...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp AGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCTGCTCTCCTTTAAGCTaGAGCCCACGATGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: RRCLQNRALPELACQQPICSPLS*SPRWLV
Trigger: TACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCA...GATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGCTGGGACACCCACTaGAACGCTCTGATGGCATCG +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKSWDTH*NALMAS
Trigger: CGATGCCATCAGAGCGTTTCAGTGGGTGTCCCAGCT...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGCCAGAACTCCAGCGCTaGGACGTTGCTCCACAACTG +
Preference number: 4 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQPELQR*DVAPQL
Trigger: CAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGG...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGCCAGAACTCCAGCGCTaGGACGTTGCTCCACAACTG +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKPELQR*DVAPQL
Trigger: CAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGG...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGTGTAGTAGGGCGCCATaGGCGCGCGCGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMECSRAP*ARAARA
Trigger: CGCCCGCGCCGCGCGCGCTCATGGCGCCCTACTACA...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGCAGTGGACGGGGCTCTaGGACGTTGCCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKQWTGL*DVAISC
Trigger: GCAGCTGATGGCAACGTCTCAGAGCCCCGTCCACTG...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGACAGTGGACGGGGCTCTaGGACGTTGCCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPPPCGGDRQRQCCILQGQWTGL*DVAISC
Trigger: GCAGCTGATGGCAACGTCTCAGAGCCCCGTCCACTG...TCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCAGCACCACCAGTTTCTaGGGTGAGGAGGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFSTTSF*GEEVPS
Trigger: TGAAGGCACCTCCTCACCTCAGAAACTGGTGGTGCT...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp ACCCCACAAAGGGCCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATAGCACCACCAGTTTCTaGGGTGAGGAGGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TPQRASEVGDACAFIPIHSTTSF*GEEVPS
Trigger: TGAAGGCACCTCCTCACCTCAGAAACTGGTGGTGCT...ATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGGCCCTTTGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp GTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCCTAGGGAAGAGGGGAAGAGAGGTTACTaGCAAAGTCCAGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VLKPRGPIHPLLPCPREEGKRGY*QSPVPG
Trigger: GCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCC...CTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCGGGATGGGACTGCTCTaGGCCGCCCCCGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPGMGLL*AAPARR
Trigger: TCTCCGTGCGGGGGCGGCGCAGAGCAGTCCCATCCC...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp GTCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTGGGATGGGACTGCTCTaGGCCGCCCCCGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: VCIHNHGPQAKRSYSPTPGMGLL*AAPARR
Trigger: TCTCCGTGCGGGGGCGGCGCAGAGCAGTCCCATCCC...AGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGAGCACCACGAACAGGTTaGGCCCGCGGCGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRAPRTG*ARGGGS
Trigger: TGAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGC...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCATTCCCATACAGGCTCTaGACGGCCAGCACGTCGTCC +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSAFPYRL*TASTSS
Trigger: GGACGACGTGCTGGCCGTGCAGAGCCTGTATGGGAA...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCCAGTATTTAGGGCCCTaGGTTTCAGGGCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFQYLGP*VSGRLP
Trigger: AGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTG...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGATGTACAGTTGCTGTTaGCTGTCTACAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: PSPADFGGSRAPLAVPLGMYSCC*LSTVMA
Trigger: TGCCATCACTGTAGACAGGCAACAGCAACTGTACAT...CCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCTTAAAAATGTACAGTTaGTGTTGCCTGTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: RSPSWHASSPSRAARWPSLKMYS*CCLSTV
Trigger: CACTGTAGACAGGCAACAGCAACTGTACATTTTTAA...GCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp ACCCCACAAAGGGCCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGACGTTGCCATCAGCTaGCACCTCCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: TPQRASEVGDACAFIPIHDVAIS*HLPEMA
Trigger: AGCCATTTCTGGGAGGTGGCAGCTGATGGCAACGTC...ATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGGCCCTTTGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCGACGTTGCCATCAGCTaGCACCTCCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFDVAIS*HLPEMA
Trigger: AGCCATTTCTGGGAGGTGGCAGCTGATGGCAACGTC...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGTGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWCCPVF*RGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCA...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGAGATGGAGGCTTTGCTaGCCGGTCTTCTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWRWRLC*PVFCRG
Trigger: CCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCT...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGATGGAGGCTTTGCTaGCCGGTCTTCTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQRWRLC*PVFCRG
Trigger: CCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCT...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGAGATGGAGGCTTTGCTaGCCGGTCTTCTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLRWRLC*PVFCRG
Trigger: CCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCT...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCTCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSASRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGCTGCTTGGATCCCAGTaGTGTTACCTCTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGLLGSQ*CYLLKG
Trigger: TCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAG...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCCGGGGACGAGTCATCTaGCGCAGGGTGGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPRGRVI*RRVARS
Trigger: GGACCGCGCCACCCTGCGCCAGATGACTCGTCCCCG...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp CCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAAGGAACTGTACCTTTAGCCACGTTGCTCCACAACTaGAAGGCGGCGCGCACGGCG +
Preference number: 4 (lower is better)
Translates to: PLLGSQCCYLLKGTVPLATLLHN*KAARTA
Trigger: CGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGT...GGCTAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCGTTGTGGTCCCCTTaGAAGAAGGTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDSLWSP*KKVSRM
Trigger: CATCCGGCTCACCTTCTTCCAAGGGGACCACAACGA...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTGACCAGCGCTCATCTTaGTCGAAGTGCGCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSDQRSS*SKCASP
Trigger: CGGCGAAGCGCACTTCGACCAAGATGAGCGCTGGTC...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCGACCAGCGCTCATCTTaGTCGAAGTGCGCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCDQRSS*SKCASP
Trigger: CGGCGAAGCGCACTTCGACCAAGATGAGCGCTGGTC...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCATGGTTGCCTGCAGTTTaGCCTGGTCGAGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSAWLPAV*PGRGAS
Trigger: ACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCA...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTCCCACCTCCATGTGGTaGGGACAGACAAAGACAATG +
Preference number: 4 (lower is better)
Translates to: PLRLETPVPSSPSMLPGGPTSMW*GQTKTM
Trigger: CATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGG...ACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp GTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGAGCTGGAGCCCACGATaGTTGGTATTCATATCAATC +
Preference number: 4 (lower is better)
Translates to: VLQTSGVVGLHLQSPSGQSWSPR*LVFISI
Trigger: GATTGATATGAATACCAACCATCGTGGGCTCCAGCT...CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCGCCACCTCCCAGAAATaGCTCCCTACAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSAATSQK*LPTVMA
Trigger: TGCCATCACTGTAGGGAGCCATTTCTGGGAGGTGGC...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCCCAGAACTCCAGCGCTaGGACGTTGCTCCACAACTG +
Preference number: 4 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCPELQR*DVAPQL
Trigger: CAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGG...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CTGCTCCATGAAGTTCTCCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCCCCTTGGAAGAAGGTaGGCCGGATGTCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LLHEVLQALGSFLVASLGPLGRR*AGCQRG
Trigger: GCCCCGCTGACATCCGGCTCACCTTCTTCCAAGGGG...GCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGGAGAACTTCATGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR TCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCGCGCGGGCGAGTGGGTaGGGCCAAGCGTGTGACCGA +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFARASG*GQACDR
Trigger: TCGGTCACACGCTTGGCCTCACCCACTCGCCCGCGC...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGCACGTCGTCCCAGCTaGGCAGCGCGTCGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: DRQRQCCILQGTKADRLPARRPS*AARRGP
Trigger: TGGGCCGCGACGCGCTGCTCAGCTGGGACGACGTGC...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGGGATCTCCATCATTCAATaGCACTGCCGCAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LRLETPVPSSPSMLPGGGISIIQ*HCRSLN
Trigger: ATTGAGGCTGCGGCAGTGTCATTGAATGATGGAGAT...CCCACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTATCTCCATCATTCAATaGCACTGCCGCAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPISIIQ*HCRSLN
Trigger: ATTGAGGCTGCGGCAGTGTCATTGAATGATGGAGAT...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTCATCTCGGAAGAAGATaGTGGAGCCATCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSHLGRR*WSHRAS
Trigger: CGAGGCCCGATGGCTCCATCATCTTCTTCCGAGATG...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPNMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRNMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TCTGCTGAGTTTTTCATCCCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAACCGGGGTTTCGCCAGTaGCCTAGCTGCGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SAEFFIPLLGSQCCYLLKPGFRQ*PSCALW
Trigger: CCAGAGCGCGCAGCTAGGGCACTGGCGAAACCCCGG...TTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGGGATGAAAAACTCAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp CCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAGGCCTGGGGAGGATACCGGGGTTTCGCCAGTaGCCTAGCTGCGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PLERNCTFSRRNKGLGRIPGFRQ*PSCALW
Trigger: CCAGAGCGCGCAGCTAGGGCACTGGCGAAACCCCGG...TATCCTCCCCAGGCCTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp GGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGAAATCTTGGCCTACCGGGGTTTCGCCAGTaGCCTAGCTGCGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSAVFLAIGFKTLGNLGLPGFRQ*PSCALW
Trigger: CCAGAGCGCGCAGCTAGGGCACTGGCGAAACCCCGG...TAGGCCAAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGAGGCTCGGGGAGCTACTaGGCGCAGGGAACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRGSGSY*AQGTSR
Trigger: CCGGCTGGTTCCCTGCGCGCAGTAGCTCCCCGAGCC...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCTCAGGCTTTAGCCGAGGCTCGGGGAGCTACTaGGCGCAGGGAACCAGCCGG +
Preference number: 4 (lower is better)
Translates to: YLHSQCRSPRTLSSGFSRGSGSY*AQGTSR
Trigger: CCGGCTGGTTCCCTGCGCGCAGTAGCTCCCCGAGCC...TCGGCTAAAGCCTGAGGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR GCA 90 bp CCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAGGCCTGGGGAGGATACCCCACAGTAGCAGCTaGAGGGCGCGCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PLERNCTFSRRNKGLGRIPHSSS*RARSRR
Trigger: CCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGG...TATCCTCCCCAGGCCTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp TCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCCCACAGTAGCAGCTaGAGGGCGCGCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVFTIMVLKPRGPIHPLLPHSSS*RARSRR
Trigger: CCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGG...GAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACCCCACAGTAGCAGCTaGAGGGCGCGCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRPHSSS*RARSRR
Trigger: CCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGG...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGACCAGCGCTGAGACGTTaGTCCACAACTGGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: PPPPCGGDRQRQCCILQGPALRR*STTGRR
Trigger: CCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGG...TCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGTCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKSRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGTCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLSRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGAGTTTTTCATCCCCCTaGTTGGATCCCAGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRSFSSP*LDPSAV
Trigger: AACAGCACTGGGATCCAAGCAGGGGGATGAAAAACT...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp GTCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTGGCTGGGCGTCCAGGTaGCCCCACAGTAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VCIHNHGPQAKRSYSPTPGWASR*PHSSSC
Trigger: GCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCC...AGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp GTCCCAGGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGAAATCTTTCATCTGGCGCAGGGTaGCGCGGTCCAACACGCCGC +
Preference number: 4 (lower is better)
Translates to: VPGSAVFLAIGFKTLGNLSSGAG*RGPTRR
Trigger: GCGGCGTGTTGGACCGCGCCACCCTGCGCCAGATGA...AAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCGGGGACGAGTCATCTaGCGCAGGGTGGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFRGRVI*RRVARS
Trigger: GGACCGCGCCACCCTGCGCCAGATGACTCGTCCCCG...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCAGCGGGGCCTGTGGCTaGGGCCTCCCAGAACTCCAG +
Preference number: 4 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPSGACG*GLPELQ
Trigger: CTGGAGTTCTGGGAGGCCCCAGCCACAGGCCCCGCT...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSAASKEE*QYLGPC
Trigger: GCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGC...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GACCCCCTCTGCTCTCCTTTAAGCTGGAGCCCACGATGGTTGGTATTCATATCATGCCCGGCACAGCTGTaGGAGACCCCACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: DPLCSPLSWSPRWLVFISCPAQL*ETPHWL
Trigger: AAGCCAGTGTGGGGTCTCCCACAGCTGTGCCGGGCA...TGATATGAATACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCAGAGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCCCCACCTCCATGTGGTaGGGACAGACAAAGACAATG +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFPTSMW*GQTKTM
Trigger: CATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGG...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGAGCTGGGACACCCACTaGAACGCTCTGATGGCATCG +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKSWDTH*NALMAS
Trigger: CGATGCCATCAGAGCGTTTCAGTGGGTGTCCCAGCT...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGAGGTCCAACACGCCGCTaGCAGGTAGCTGGGACACCC +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRGPTRR*QVAGTP
Trigger: GGGTGTCCCAGCTACCTGTCAGCGGCGTGTTGGACC...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp TCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCGGTCCAACACGCCGCTaGCAGGTAGCTGGGACACCC +
Preference number: 4 (lower is better)
Translates to: SVFTIMVLKPRGPIHPLLGPTRR*QVAGTP
Trigger: GGGTGTCCCAGCTACCTGTCAGCGGCGTGTTGGACC...GAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR TCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACCCCTTGGAAGAAGGTaGGCCGGATGTCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRPLGRR*AGCQRG
Trigger: GCCCCGCTGACATCCGGCTCACCTTCTTCCAAGGGG...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCGTTGCCTGTCTACAGTaGTGGCATCGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSAVACLQ*WHRRKS
Trigger: ACTCTTCCTTCGATGCCATCACTGTAGACAGGCAAC...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp GGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGGTCATCTCGGAAGAAATCTCCATCATTCAATaGCACTGCCGCAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: GCLQFGLVEAPVAVISEEISIIQ*HCRSLN
Trigger: ATTGAGGCTGCGGCAGTGTCATTGAATGATGGAGAT...TTCTTCCGAGATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGACATCTCGGAAGAAGATaGTGGAGCCATCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PPPPCGGDRQRQCCILQGHLGRR*WSHRAS
Trigger: CGAGGCCCGATGGCTCCATCATCTTCTTCCGAGATG...TCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCACCAGTTTCTGAGGTaGGGAGGTGCCTTCAGAACA +
Preference number: 4 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLHQFLR*GGAFRT
Trigger: TGTTCTGAAGGCACCTCCTCACCTCAGAAACTGGTG...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGTGGGGGTGGGGCCTCTaGCTAAATATGACACCGTTT +
Preference number: 4 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLWGWGL*LNMTPF
Trigger: AAACGGTGTCATATTTAGTCAGAGGCCCCACCCCCA...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGGGATGGGACTGCTCTaGGCCGCCCCCGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: DRQRQCCILQGTKADRLPGMGLL*AAPARR
Trigger: TCTCCGTGCGGGGGCGGCGCAGAGCAGTCCCATCCC...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TCTGCTGAGTTTTTCATCCCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAATCATCTTGGTCGAAGTaGGCTTCGCCGCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SAEFFIPLLGSQCCYLLKSSWSK*ASPRRG
Trigger: GCCCCGCCGCGGCGAAGCGCACTTCGACCAAGATGA...TTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGGGATGAAAAACTCAGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCACAGTATTTAGGGCCCTaGGTTTCAGGGCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSAQYLGP*VSGRLP
Trigger: AGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTG...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCCAGTATTTAGGGCCCTaGGTTTCAGGGCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCQYLGP*VSGRLP
Trigger: AGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTG...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAGGCCTGGGGAGGATAGCGGCCCGAGGTGGTTaGCTGCAGTTTGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PLERNCTFSRRNKGLGRIAARGG*LQFGLV
Trigger: GACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGC...TATCCTCCCCAGGCCTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGTGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKCCPVF*RGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCA...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGGTTGGAGACGCCTGTaGCTTCATCCCCATCCATGC +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKGWRRL*LHPHPC
Trigger: GCATGGATGGGGATGAAGGCACAGGCGTCTCCAACC...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGAACGTTGCTCCACAACTaGAAGGCGGCGCGCACGGCG +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRTLLHN*KAARTA
Trigger: CGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGT...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCTGTCAGCGGGGCCTGTaGCTGGGGCCTCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPCQRGL*LGPPRT
Trigger: AGTTCTGGGAGGCCCCAGCCACAGGCCCCGCTGACA...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGCCCAGCCCATCGTTGTaGTCCCCTTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKPSPSL*SPWKKV
Trigger: CACCTTCTTCCAAGGGGACCACAACGATGGGCTGGG...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCTCAGGCTTTAGCCGACGCCAGGGCGCCCCCTaGGCCATCAAAGGCATTGCC +
Preference number: 4 (lower is better)
Translates to: YLHSQCRSPRTLSSGFSRRQGAP*AIKGIA
Trigger: GGCAATGCCTTTGATGGCCCAGGGGGCGCCCTGGCG...TCGGCTAAAGCCTGAGGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CCA 90 bp CAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QTDFQMEALLPGLLQRDSASKEE*QYLGPC
Trigger: GCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGC...TGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACCCAGCGGCCCGAGGTaGTTGCCTGCAGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRPSGPR*LPAVWP
Trigger: AGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGG...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSRQTSR*RLCCPV
Trigger: GACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGGTCATCTCGGAAGAAGATGCTCTCCTTTAAGCTaGAGCCCACGATGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: LPAVWPGRGASSGHLGRRCSPLS*SPRWLV
Trigger: TACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCA...TCTTCTTCCGAGATGACCGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp GTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCCTAGGGAAGAGTGGGGACCTGTTCATTaGGGTATCCGTACTTCTCTA +
Preference number: 4 (lower is better)
Translates to: VLKPRGPIHPLLPCPREEWGPVH*GIRTSL
Trigger: TAGAGAAGTACGGATACCTCAATGAACAGGTCCCCA...CTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR TCA 90 bp TGCCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGTCCCAGGCTCAGCTGTTTTAGCTGGGACACCCACTaGAACGCTCTGATGGCATCG +
Preference number: 4 (lower is better)
Translates to: CPREERLLTKSSPRLSCFSWDTH*NALMAS
Trigger: CGATGCCATCAGAGCGTTTCAGTGGGTGTCCCAGCT...AAAACAGCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR TCA 90 bp CAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGTTGCCTGTCTACAGTaGTGGCATCGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: QTDFQMEALLPGLLQRDSVACLQ*WHRRKS
Trigger: ACTCTTCCTTCGATGCCATCACTGTAGACAGGCAAC...TGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp CCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAGGCCTGGGGAGGATACAGTGGACGGGGCTCTaGGACGTTGCCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLERNCTFSRRNKGLGRIQWTGL*DVAISC
Trigger: GCAGCTGATGGCAACGTCTCAGAGCCCCGTCCACTG...TATCCTCCCCAGGCCTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTCACCAGTTTCTGAGGTaGGGAGGTGCCTTCAGAACA +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSHQFLR*GGAFRT
Trigger: TGTTCTGAAGGCACCTCCTCACCTCAGAAACTGGTG...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp TCGGGCCAGCACGTAGTAGCGGGCACCCTTGAAGAGGATGAGGCGGCGCAGAGGAAACGGATTGCACTTTaGAGAAGTAGAAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: SGQHVVAGTLEEDEAAQRKRIAL*RSRNLH
Trigger: ATGGAGATTTCTACTTCTTCAAAGTGCAATCCGTTT...CCTCTGCGCCGCCTCATCCTCTTCAAGGGTGCCCGCTACTACGTGCTGGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp TCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCCGATCTCCCAGAACTTTGGCACCACGAACAGGTTaGGCCCGCGGCGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLGRCCYLHSQCRSPRTLAPRTG*ARGGGS
Trigger: TGAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGC...CAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR GCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGACGTTGCCATCAGCTaGCACCTCCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKDVAIS*HLPEMA
Trigger: AGCCATTTCTGGGAGGTGGCAGCTGATGGCAACGTC...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTGCTCCATGAAGTTCTCCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCCGACCCATCTTTCCTaGAGTGGACGGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLHEVLQALGSFLVASLGPTHLS*SGRGSE
Trigger: CTCAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGG...GCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGGAGAACTTCATGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR GCA 90 bp CCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAGGCCTGGGGAGGATACCCGAGGTGGTTGCCTaGAGTTTGGCCTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: PLERNCTFSRRNKGLGRIPEVVA*SLAWSR
Trigger: CCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGG...TATCCTCCCCAGGCCTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACCCGAGGTGGTTGCCTaGAGTTTGGCCTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRPEVVA*SLAWSR
Trigger: CCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGG...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGCCCGAGGTGGTTGCCTaGAGTTTGGCCTGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQPEVVA*SLAWSR
Trigger: CCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGG...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCTCCCCGAGTTGGCATaGCAGCAGCCCATCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFLPELA*QQPIQG
Trigger: GCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAG...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAAGGAACTGTACCTTTAGCCAGATGGAGGCTTTGCTaGCCGGTCTTCTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLLGSQCCYLLKGTVPLARWRLC*PVFCRG
Trigger: CCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCT...GGCTAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGGACAGACAAAGACAATaGTGCATTCTTCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGDRQRQ*CILQGT
Trigger: TGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TGCCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGTCCCAGGCTCAGCTGTTTTCACCCACTCCTCCCGTaGCCTAGGGAAGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: CPREERLLTKSSPRLSCFHPLLP*PREERL
Trigger: TAACCTCTCTTCCCTAGGGCACGGGAGGAGTGGGTG...AAAACAGCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCATCATCTGGCGCAGGGTaGCGCGGTCCAACACGCCGC +
Preference number: 4 (lower is better)
Translates to: DRQRQCCILQGTKADRLPSSGAG*RGPTRR
Trigger: GCGGCGTGTTGGACCGCGCCACCCTGCGCCAGATGA...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCACGCCAGGGCGCCCCCTaGGCCATCAAAGGCATTGCC +
Preference number: 4 (lower is better)
Translates to: DRQRQCCILQGTKADRLPRQGAP*AIKGIA
Trigger: GGCAATGCCTTTGATGGCCCAGGGGGCGCCCTGGCG...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGAGCTTTCCTGGGAGCTaGACGGCCACTGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQSFPGS*TATEPP
Trigger: AGGGGGCTCAGTGGCCGTCCAGCTCCCAGGAAAGCT...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGACCCCCACCTCCATGTaGTGGGGACAGACAAAGACA +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLTPTSM*WGQTKT
Trigger: TGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGT...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGTGGGGACCTGTTCATTaGGGTATCCGTACTTCTCTA +
Preference number: 4 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQWGPVH*GIRTSL
Trigger: TAGAGAAGTACGGATACCTCAATGAACAGGTCCCCA...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGGGTCCAACACGCCGCTaGCAGGTAGCTGGGACACCC +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMEGPTRR*QVAGTP
Trigger: GGGTGTCCCAGCTACCTGTCAGCGGCGTGTTGGACC...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGCCCCTTGGAAGAAGGTaGGCCGGATGTCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMEPLGRR*AGCQRG
Trigger: GCCCCGCTGACATCCGGCTCACCTTCTTCCAAGGGG...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCAGCATCGACCCCCTTTaGAGAAGTAGAAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLPGLLQRDSEASKRGSASIDPL*RSRNLH
Trigger: ATGGAGATTTCTACTTCTTCAAAGGGGGTCGATGCT...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCACCAGTTTCTGAGGTaGGGAGGTGCCTTCAGAACA +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLHQFLR*GGAFRT
Trigger: TGTTCTGAAGGCACCTCCTCACCTCAGAAACTGGTG...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWNMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLNMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGTCCCACTCTGTGTCCTaGCCCCACAAAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQSHSVS*PHKGPL
Trigger: CAGAGGCCCTTTGTGGGGTCAGGACACAGAGTGGGA...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTAATGGCTCCCTACAGTaGTGGCATCGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSNGSLQ*WHRRKS
Trigger: ACTCTTCCTTCGATGCCATCACTGTAGGGAGCCATT...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGGACCCTTTTGTTACCTTGCTTTaGAAAGCGTTTCTTACGCCT +
Preference number: 4 (lower is better)
Translates to: GLGRIEVLGGKGQGIWDPFVTLL*KAFLTP
Trigger: AGGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAA...AGGGTCCCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGCCGGCTCCGGCAGATaGTCAGGCCAGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: DRQRQCCILQGTKADRLPAGSGR*SGQFTR
Trigger: CCTGGTGAACTGGCCTGAGCATCTGCCGGAGCCGGC...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGTTCCCATACAGGCTCTaGACGGCCAGCACGTCGTCC +
Preference number: 4 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQFPYRL*TASTSS
Trigger: GGACGACGTGCTGGCCGTGCAGAGCCTGTATGGGAA...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGAGACAAAGACAATGCTaGATTCTTCAAGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGRQRQC*ILQGTK
Trigger: CTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCT...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCCTAGGGAAGAGAGGTTACGTGCTCACCTTGCTTTaGAAAGCGTTTCTTACGCCT +
Preference number: 4 (lower is better)
Translates to: SQEVLFTHSSRALGKRGYVLTLL*KAFLTP
Trigger: AGGCGTAAGAAACGCTTTGCAAAGCAAGGTGAGCAC...GTAACCTCTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGTGTCAGCGGGGCCTGTaGCTGGGGCCTCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMECQRGL*LGPPRT
Trigger: AGTTCTGGGAGGCCCCAGCCACAGGCCCCGCTGACA...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCATGTCAGCGGGGCCTGTaGCTGGGGCCTCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: DRQRQCCILQGTKADRLPCQRGL*LGPPRT
Trigger: AGTTCTGGGAGGCCCCAGCCACAGGCCCCGCTGACA...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLASKEE*QYLGPC
Trigger: GCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGC...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCTGCCCGGCACAGCTGTaGGAGACCCCACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFCPAQL*ETPHWL
Trigger: AAGCCAGTGTGGGGTCTCCCACAGCTGTGCCGGGCA...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAGGCCTGGGGAGGATATGGTTGCCTGCAGTTTaGCCTGGTCGAGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: PLERNCTFSRRNKGLGRIWLPAV*PGRGAS
Trigger: ACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCA...TATCCTCCCCAGGCCTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp GACCCCCTCTGCTCTCCTTTAAGCTGGAGCCCACGATGGTTGGTATTCATATCAAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: DPLCSPLSWSPRWLVFISRQTSR*RLCCPV
Trigger: GACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT...TGATATGAATACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCAGAGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCCCACCTCCATGTGGTaGGGACAGACAAAGACAATG +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLPTSMW*GQTKTM
Trigger: CATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGG...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTCACAGTCTTGCAAAATaGTCTCGAATTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLRLETPVPSSPSMLPGGHSLAK*SRISLL
Trigger: CAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTG...ACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTGGGGACCTGTTCATTaGGGTATCCGTACTTCTCTA +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSWGPVH*GIRTSL
Trigger: TAGAGAAGTACGGATACCTCAATGAACAGGTCCCCA...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GTCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTAGCTGGGACACCCACTaGAACGCTCTGATGGCATCG +
Preference number: 4 (lower is better)
Translates to: VCIHNHGPQAKRSYSPTPSWDTH*NALMAS
Trigger: CGATGCCATCAGAGCGTTTCAGTGGGTGTCCCAGCT...AGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR TCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACCAGAACTCCAGCGCTaGGACGTTGCTCCACAACTG +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRPELQR*DVAPQL
Trigger: CAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGG...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGTTGCCTGTCTACAGTaGTGGCATCGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKVACLQ*WHRRKS
Trigger: ACTCTTCCTTCGATGCCATCACTGTAGACAGGCAAC...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp TTAGGCCGTTGTTGTTACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCCAGTGGACGGGGCTCTaGGACGTTGCCATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGRCCYLHSQCRSPRTLSQWTGL*DVAISC
Trigger: GCAGCTGATGGCAACGTCTCAGAGCCCCGTCCACTG...GGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR TCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGAGCATCGACCCCCTTTaGAGAAGTAGAAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWSIDPL*RSRNLH
Trigger: ATGGAGATTTCTACTTCTTCAAAGGGGGTCGATGCT...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGCCCACAAAGGGCCTCTaGGGTTGGAGACGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMEPTKGL*GWRRLC
Trigger: GCACAGGCGTCTCCAACCTCAGAGGCCCTTTGTGGG...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCTCCCACTCTGTGTCCTaGCCCCACAAAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFSHSVS*PHKGPL
Trigger: CAGAGGCCCTTTGTGGGGTCAGGACACAGAGTGGGA...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGTACCATTTGTTACCTTaGTTTGCAAAGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGYHLLP*FAKRFL
Trigger: TAAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTA...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTGCTCCATGAAGTTCTCCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCAGTATTTAGGGCCCTaGGTTTCAGGGCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLHEVLQALGSFLVASLGQYLGP*VSGRLP
Trigger: AGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTG...GCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGGAGAACTTCATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR GCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGATGTACAGTTGCTGTTaGCTGTCTACAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKMYSCC*LSTVMA
Trigger: TGCCATCACTGTAGACAGGCAACAGCAACTGTACAT...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp CTGCTCCATGAAGTTCTCCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCGACGTTGCCATCAGCTaGCACCTCCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: LLHEVLQALGSFLVASLGDVAIS*HLPEMA
Trigger: AGCCATTTCTGGGAGGTGGCAGCTGATGGCAACGTC...GCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGGAGAACTTCATGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR GCA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACCGACCCATCTTTCCTaGAGTGGACGGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRPTHLS*SGRGSE
Trigger: CTCAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGG...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCACTGCTTGGATCCCAGTaGTGTTACCTCTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSALLGSQ*CYLLKG
Trigger: TCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAG...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp GGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGAAATCTTGGCCTACACCCACTCCTCCCGTaGCCTAGGGAAGAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: GSAVFLAIGFKTLGNLGLHPLLP*PREERL
Trigger: TAACCTCTCTTCCCTAGGGCACGGGAGGAGTGGGTG...TAGGCCAAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCGACCAGCGCTCATCTTaGTCGAAGTGCGCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFDQRSS*SKCASP
Trigger: CGGCGAAGCGCACTTCGACCAAGATGAGCGCTGGTC...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGTGCCCGGCACAGCTGTaGGAGACCCCACACTGGCTT +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMECPAQL*ETPHWL
Trigger: AAGCCAGTGTGGGGTCTCCCACAGCTGTGCCGGGCA...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCTGGTTGCCTGCAGTTTaGCCTGGTCGAGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFWLPAV*PGRGAS
Trigger: ACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCA...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCCTAGGGAAGAGGACATTGGGAAATCTTaGCCTAGCCGGATTTTAACA +
Preference number: 4 (lower is better)
Translates to: VLKPRGPIHPLLPCPREEDIGKS*PSRILT
Trigger: TGTTAAAATCCGGCTAGGCCAAGATTTCCCAATGTC...CTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCGGAGCCCACGATGGTTaGTATTCATATCAATCAAAC +
Preference number: 4 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFGAHDG*YSYQSN
Trigger: GTTTGATTGATATGAATACCAACCATCGTGGGCTCC...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR TCA 90 bp TACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCTCAGGCTTTAGCCGAAGCTGGGACACCCACTaGAACGCTCTGATGGCATCG +
Preference number: 4 (lower is better)
Translates to: YLHSQCRSPRTLSSGFSRSWDTH*NALMAS
Trigger: CGATGCCATCAGAGCGTTTCAGTGGGTGTCCCAGCT...TCGGCTAAAGCCTGAGGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR TCA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCAGCATCGACCCCCTTTaGAGAAGTAGAAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCSIDPL*RSRNLH
Trigger: ATGGAGATTTCTACTTCTTCAAAGGGGGTCGATGCT...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GTCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTGGGAAGAGAGGTTACTaGCAAAGTCCAGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VCIHNHGPQAKRSYSPTPGKRGY*QSPVPG
Trigger: GCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCC...AGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR TCA 90 bp CCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACAAGTGGCTCTGCTCCATaGAGTTCTCCAGGCACTCGG +
Preference number: 4 (lower is better)
Translates to: PGTRFLSCCFFRPLLLLTSGSAP*SSPGTR
Trigger: CCGAGTGCCTGGAGAACTTCATGGAGCAGAGCCACT...TGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR GCA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGCAGTATTTAGGGCCCTaGGTTTCAGGGCGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQQYLGP*VSGRLP
Trigger: AGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTG...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TTAGGCCGTTGTTGTTACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCCCGACCCATCTTTCCTaGAGTGGACGGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LGRCCYLHSQCRSPRTLSPTHLS*SGRGSE
Trigger: CTCAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGG...GGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR GCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCTGCTGCCCGGTCTTCTaGAGAGGGACTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFCCPVF*RGTQRL
Trigger: AAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCA...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCAGATGGAGGCTTTGCTaGCCGGTCTTCTGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFRWRLC*PVFCRG
Trigger: CCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCT...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACCCAGCCCATCGTTGTaGTCCCCTTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRPSPSL*SPWKKV
Trigger: CACCTTCTTCCAAGGGGACCACAACGATGGGCTGGG...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CTGCTCCATGAAGTTCTCCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLHEVLQALGSFLVASLGASKEE*QYLGPC
Trigger: GCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGC...GCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGGAGAACTTCATGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR CCA 90 bp GGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCCCGCAGCCTCAATGTTaGGGGGCAGCCCGACCCATC +
Preference number: 4 (lower is better)
Translates to: GSFLVASLGRCCYLHSQCPQPQC*GAARPI
Trigger: GATGGGTCGGGCTGCCCCCCAACATTGAGGCTGCGG...GCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR CCA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCATGGTTGCCTGCAGTTTaGCCTGGTCGAGGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: DRQRQCCILQGTKADRLPWLPAV*PGRGAS
Trigger: ACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCA...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQRQTSR*RLCCPV
Trigger: GACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGAACCCCCACCTCCATGTaGTGGGGACAGACAAAGACA +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRTPTSM*WGQTKT
Trigger: TGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGT...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGGGAGCCCACGATGGTTaGTATTCATATCAATCAAAC +
Preference number: 4 (lower is better)
Translates to: QMEALLPGLLQRDSEASKGAHDG*YSYQSN
Trigger: GTTTGATTGATATGAATACCAACCATCGTGGGCTCC...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CCA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGTCCAAAGTAGGCAAGTaGCTCTGCTCCATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKSKVGK*LCSMKF
Trigger: GAACTTCATGGAGCAGAGCCACTTGCCTACTTTGGA...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR TCA 90 bp CCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAAGCATCGACCCCCTTTaGAGAAGTAGAAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: PPPPCGGDRQRQCCILQGSIDPL*RSRNLH
Trigger: ATGGAGATTTCTACTTCTTCAAAGGGGGTCGATGCT...TCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGCATCTCGGAAGAAGATaGTGGAGCCATCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMEHLGRR*WSHRAS
Trigger: CGAGGCCCGATGGCTCCATCATCTTCTTCCGAGATG...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCAGCACCACCAGTTTCTaGGGTGAGGAGGTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFSTTSF*GEEVPS
Trigger: TGAAGGCACCTCCTCACCTCAGAAACTGGTGGTGCT...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGTTTGTTACCTTGCTTTaGAAAGCGTTTCTTACGCCT +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWFVTLL*KAFLTP
Trigger: AGGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAA...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCGGCCATCAAAGGCATTaGCCAGCCCATCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFGHQRH*PAHRCG
Trigger: ACCACAACGATGGGCTGGGCAATGCCTTTGATGGCC...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTTAAAAATGTACAGTTaGTGTTGCCTGTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDLKMYS*CCLSTV
Trigger: CACTGTAGACAGGCAACAGCAACTGTACATTTTTAA...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCGACGTTGCCATCAGCTaGCACCTCCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFDVAIS*HLPEMA
Trigger: AGCCATTTCTGGGAGGTGGCAGCTGATGGCAACGTC...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGGACAGACAAAGACAATaGTGCATTCTTCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLDRQRQ*CILQGT
Trigger: TGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGGACAGACAAAGACAATaGTGCATTCTTCAAGGAACA +
Preference number: 4 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQDRQRQ*CILQGT
Trigger: TGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp TGCCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGTCCCAGGCTCAGCTGTTTTGTGCTCACCTTGCTTTaGAAAGCGTTTCTTACGCCT +
Preference number: 4 (lower is better)
Translates to: CPREERLLTKSSPRLSCFVLTLL*KAFLTP
Trigger: AGGCGTAAGAAACGCTTTGCAAAGCAAGGTGAGCAC...AAAACAGCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCACCCAGCCCATCGTTGTaGTCCCCTTGGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: DRQRQCCILQGTKADRLPPSPSL*SPWKKV
Trigger: CACCTTCTTCCAAGGGGACCACAACGATGGGCTGGG...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCCCCACCTCCATGTGGTaGGGACAGACAAAGACAATG +
Preference number: 4 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPPTSMW*GQTKTM
Trigger: CATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGG...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
50% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCTGGGGGTGGGGCCTCTaGCTAAATATGACACCGTTT +
Preference number: 4 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFWGWGL*LNMTPF
Trigger: AAACGGTGTCATATTTAGTCAGAGGCCCCACCCCCA...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGTCTCGGCCCACCAGCTaGAGGCACCTCTTTATTCCA +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMESRPTS*RHLFIP
Trigger: TGGAATAAAGAGGTGCCTTCAGCTGGTGGGCCGAGA...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp CAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAAAACGGATTGCACTTTaGAGAAGTAGAAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: QTDFQMEALLPGLLQRDSKRIAL*RSRNLH
Trigger: ATGGAGATTTCTACTTCTTCAAAGTGCAATCCGTTT...TGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTTTGTTACCTTGCTTTaGAAAGCGTTTCTTACGCCT +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSFVTLL*KAFLTP
Trigger: AGGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAA...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGTTAAAAATGTACAGTTaGTGTTGCCTGTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWLKMYS*CCLSTV
Trigger: CACTGTAGACAGGCAACAGCAACTGTACATTTTTAA...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGGACGTTGCCATCAGCTaGCACCTCCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMEDVAIS*HLPEMA
Trigger: AGCCATTTCTGGGAGGTGGCAGCTGATGGCAACGTC...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCATCCAGATGGAGGCTTTaGTGCCCGGTCTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DRQRQCCILQGTKADRLPSRWRL*CPVFCR
Trigger: TCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGA...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp AACAAAGGCCTGGGGAGGATAGAAGTCCTCGGAGGAAAGGGCCAAGGGATCTGGAGACAAAGACAATGCTaGATTCTTCAAGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: NKGLGRIEVLGGKGQGIWRQRQC*ILQGTK
Trigger: CTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCT...CCAGATCCCTTGGCCCTTTCCTCCGAGGACTTCTATCCTCCCCAGGCCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGAGACAAAGACAATGCTaGATTCTTCAAGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLRQRQC*ILQGTK
Trigger: CTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCT...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGTCGTTGTGGTCCCCTTaGAAGAAGGTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMESLWSP*KKVSRM
Trigger: CATCCGGCTCACCTTCTTCCAAGGGGACCACAACGA...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CCA 90 bp TTAGGCCGTTGTTGTTACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCTCGTTGTGGTCCCCTTaGAAGAAGGTGAGCCGGATG +
Preference number: 4 (lower is better)
Translates to: LGRCCYLHSQCRSPRTLSSLWSP*KKVSRM
Trigger: CATCCGGCTCACCTTCTTCCAAGGGGACCACAACGA...GGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CCA 90 bp GTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGCTGTATTCACAATCATaGTCCTCAAGCCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VFTIMVLKPRGPIHPLLPLYSQS*SSSQEV
Trigger: GACCTCTTGGCTTGAGGACCATGATTGTGAATACAG...CGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp CTCCCGTGCCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGTCCCAGGCTCAGCTATCAAGGAATTACATaGGTTTTGTGTTTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LPCPREERLLTKSSPRLSYQGIT*VLCLIW
Trigger: CCAGATCAAACACAAAACCCATGTAATTCCTTGATA...GCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCACGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR TCA 90 bp CCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACAGTTGCCTGTCTACAGTaGTGGCATCGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PGTRFLSCCFFRPLLLLTVACLQ*WHRRKS
Trigger: ACTCTTCCTTCGATGCCATCACTGTAGACAGGCAAC...TGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615317.4
CDS-3UTR TCA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCAACATGATTTTGCCCTaGGAGCACCACCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPNMILP*EHHQFL
Trigger: CAGAAACTGGTGGTGCTCTCAGGGCAAAATCATGTT...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGTTTGTTACCTTGCTTTaGAAAGCGTTTCTTACGCCT +
Preference number: 4 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLFVTLL*KAFLTP
Trigger: AGGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAA...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGTACCATTTGTTACCTTaGTTTGCAAAGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLYHLLP*FAKRFL
Trigger: TAAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTA...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTAGACAAAGACAATGCTaGATTCTTCAAGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSRQRQC*ILQGTK
Trigger: CTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCT...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp CCTCTTGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAGGCCTGGGGAGGATAAGTTTTTCATCCCCCTaGTTGGATCCCAGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PLERNCTFSRRNKGLGRISFSSP*LDPSAV
Trigger: AACAGCACTGGGATCCAAGCAGGGGGATGAAAAACT...TATCCTCCCCAGGCCTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGATTTCATCCCCCTGCTTaGATCCCAGTGCTGTTACCT +
Preference number: 4 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRFHPPA*IPVLLP
Trigger: AGGTAACAGCACTGGGATCCAAGCAGGGGGATGAAA...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp TGCCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGTCCCAGGCTCAGCTGTTTTGACATTGGGAAATCTTaGCCTAGCCGGATTTTAACA +
Preference number: 4 (lower is better)
Translates to: CPREERLLTKSSPRLSCFDIGKS*PSRILT
Trigger: TGTTAAAATCCGGCTAGGCCAAGATTTCCCAATGTC...AAAACAGCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR TCA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGAATCTCCATCATTCAATaGCACTGCCGCAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRISIIQ*HCRSLN
Trigger: ATTGAGGCTGCGGCAGTGTCATTGAATGATGGAGAT...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR TCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGATCTCTTAGAGACAGATaGTCCAAAGTAGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRSLRDR*SKVGKW
Trigger: CCACTTGCCTACTTTGGATCATCTGTCTCTAAGAGA...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR TCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGAATGGCTCCCTACAGTaGTGGCATCGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMENGSLQ*WHRRKS
Trigger: ACTCTTCCTTCGATGCCATCACTGTAGGGAGCCATT...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCATACCATTTGTTACCTTaGTTTGCAAAGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: GTKADRLPDGGFAARSSAYHLLP*FAKRFL
Trigger: TAAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTA...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCGGCCATCAAAGGCATTaGCCAGCCCATCGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GSFLVASLGRCCYLHSQCGHQRH*PAHRCG
Trigger: ACCACAACGATGGGCTGGGCAATGCCTTTGATGGCC...GCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR GCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGAATGTACAGTTGCTGTTaGCTGTCTACAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRMYSCC*LSTVMA
Trigger: TGCCATCACTGTAGACAGGCAACAGCAACTGTACAT...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp CCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGATTAAAAATGTACAGTTaGTGTTGCCTGTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: PPPPCGGDRQRQCCILQGLKMYS*CCLSTV
Trigger: CACTGTAGACAGGCAACAGCAACTGTACATTTTTAA...TCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp GCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ALGSFLVASLGRCCYLHSASKEE*QYLGPC
Trigger: GCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGC...ACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCGAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR CCA 90 bp GGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCAGACAGACTTCCAGATaGAGGCTTTGCTGCCCGGTC +
Preference number: 4 (lower is better)
Translates to: GSFLVASLGRCCYLHSQCRQTSR*RLCCPV
Trigger: GACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT...GCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CCA 90 bp AGTCCAGTCCCAGGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGATGTTTTCCTAGCCATTaGCTTCAAGACATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SPVPGSAVFLAIGFKTLGCFPSH*LQDIGK
Trigger: TTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACA...TCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCCTGGGACTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp TCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCTGTATTCACAATCATaGTCCTCAAGCCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SVFTIMVLKPRGPIHPLLLYSQS*SSSQEV
Trigger: GACCTCTTGGCTTGAGGACCATGATTGTGAATACAG...GAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
3UTR CAA 72 bp TTCATCCCCCTGCTTGGATCCCAGTGCTGTTACCTCTaGAAAGGAACTGTACCTTTAGCCGAAGAAACAAAG +
Preference number: 4 (lower is better)
Translates to: FIPLLGSQCCYL*KGTVPLAEETK
Trigger: CTTTGTTTCTTCGGCTAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGGGATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR TCA 90 bp GGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCCACCAGTTTCTGAGGTaGGGAGGTGCCTTCAGAACA +
Preference number: 4 (lower is better)
Translates to: GSFLVASLGRCCYLHSQCHQFLR*GGAFRT
Trigger: TGTTCTGAAGGCACCTCCTCACCTCAGAAACTGGTG...GCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR GCA 90 bp CTGCTCCATGAAGTTCTCCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCTACTTACATAGTCAATaGCGATCTCCCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: LLHEVLQALGSFLVASLGYLHSQ*RSPRTL
Trigger: CAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTA...GCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGGAGAACTTCATGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR TCA 90 bp GCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTATCTCCATCATTCAATaGCACTGCCGCAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: ALGSFLVASLGRCCYLHSISIIQ*HCRSLN
Trigger: ATTGAGGCTGCGGCAGTGTCATTGAATGATGGAGAT...ACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCGAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR GCA 90 bp GACCCCCTCTGCTCTCCTTTAAGCTGGAGCCCACGATGGTTGGTATTCATATCATACCATTTGTTACCTTaGTTTGCAAAGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: DPLCSPLSWSPRWLVFISYHLLP*FAKRFL
Trigger: TAAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTA...TGATATGAATACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCAGAGGGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR GCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGATGTACAGTTGCTGTTaGCTGTCTACAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMEMYSCC*LSTVMA
Trigger: TGCCATCACTGTAGACAGGCAACAGCAACTGTACAT...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR GCA 90 bp CTGCTCCATGAAGTTCTCCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCTTAAAAATGTACAGTTaGTGTTGCCTGTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: LLHEVLQALGSFLVASLGLKMYS*CCLSTV
Trigger: CACTGTAGACAGGCAACAGCAACTGTACATTTTTAA...GCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGGAGAACTTCATGGAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615317.4
CDS-3UTR GCA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGCGGTTCCTTTCTTGTTaGTTCTTTAGGCCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMERFLSC*FFRPLL
Trigger: CAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCG...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CCA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACACAGTCTTGCAAAATaGTCTCGAATTTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRHSLAK*SRISLL
Trigger: CAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTG...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CCA 90 bp TCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCTGTTTTCCTAGCCATTaGCTTCAAGACATTGGGAAA +
Preference number: 4 (lower is better)
Translates to: SVFTIMVLKPRGPIHPLLCFPSH*LQDIGK
Trigger: TTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACA...GAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CCA 90 bp GCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTTCCAAAGTAGGCAAGTaGCTCTGCTCCATGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ALGSFLVASLGRCCYLHSSKVGK*LCSMKF
Trigger: GAACTTCATGGAGCAGAGCCACTTGCCTACTTTGGA...ACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCGAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR TCA 90 bp CCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATTTGTCCTCAGGCTTTaGAGAAGTAGAAATCTCCAT +
Preference number: 4 (lower is better)
Translates to: PGTRFLSCCFFRPLLLLTFVLRL*RSRNLH
Trigger: ATGGAGATTTCTACTTCTTCAAAGCCTGAGGACAAA...TGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615317.4
CDS-3UTR GCA 90 bp GCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTATGTACAGTTGCTGTTaGCTGTCTACAGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: ALGSFLVASLGRCCYLHSMYSCC*LSTVMA
Trigger: TGCCATCACTGTAGACAGGCAACAGCAACTGTACAT...ACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCGAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615317.4
CDS-3UTR GCA 90 bp TACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCTCAGGCTTTAGCCGATACTTACATAGTCAATaGCGATCTCCCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: YLHSQCRSPRTLSSGFSRYLHSQ*RSPRTL
Trigger: CAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTA...TCGGCTAAAGCCTGAGGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR TCA 90 bp GGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCTCTCTTAGAGACAGATaGTCCAAAGTAGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GSFLVASLGRCCYLHSQCSLRDR*SKVGKW
Trigger: CCACTTGCCTACTTTGGATCATCTGTCTCTAAGAGA...GCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR GCA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGATACCATTTGTTACCTTaGTTTGCAAAGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: GGDRQRQCCILQGTKADRYHLLP*FAKRFL
Trigger: TAAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTA...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR GCA 90 bp GGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCCGGTTCCTTTCTTGTTaGTTCTTTAGGCCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GSFLVASLGRCCYLHSQCRFLSC*FFRPLL
Trigger: CAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCG...GCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR CCA 90 bp GGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGAAATCTTGGCCTATATCAAGGAATTACATaGGTTTTGTGTTTGATCTGG +
Preference number: 4 (lower is better)
Translates to: GSAVFLAIGFKTLGNLGLYQGIT*VLCLIW
Trigger: CCAGATCAAACACAAAACCCATGTAATTCCTTGATA...TAGGCCAAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR GCA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCATACCATTTGTTACCTTaGTTTGCAAAGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: DRQRQCCILQGTKADRLPYHLLP*FAKRFL
Trigger: TAAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTA...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS GCA 90 bp CCTTCGCCGGGAGCCGGCCAGACGTCGTCCAGCCCGGGCAGTGCCTaGCCGCGGGTCCGCCGGCCCCGGGGACCGAGGGAGGGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: PSPGAGQTSSSPGSA*PRVRRPRGPREGGR
Trigger: CCTTCCTCCCTCCCTCGGTCCCCGGGGCCGGCGGACCCGCGGGCAGGCACTGCCCGGGCTGGACGACGTCTGGCCGGCTCCCGGCGAAGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000611911.4
ENST00000612672.1
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS GCA 90 bp GCGACCATCTCGCCGCCTCCGGTGCAGCCCGGCTCGGGGAGCTACTaGGCGCAGGGAACCAGCCGGCAGTCAGCCGCGCCCGGGACCCCG +
Preference number: 5 (lower is better)
Translates to: ATISPPPVQPGSGSY*AQGTSRQSAAPGTP
Trigger: CGGGGTCCCGGGCGCGGCTGACTGCCGGCTGGTTCCCTGCGCGCAGTAGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGATGGTCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS GCA 90 bp CGCGCAGCAGGAGGCCGACGCGCGCGACCATCTCGCCGCCTCCGGTaGAGCCCGGCTCGGGGAGCTACTGCGCGCAGGGAACCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: RAAGGRRARPSRRLR*SPARGATARREPAG
Trigger: GCCGGCTGGTTCCCTGCGCGCAGTAGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGATGGTCGCGCGCGTCGGCCTCCTGCTGCGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS GCA 90 bp CCGCGCTCCGCGGGCTGGGCGTCCAGGTGGCCCCACAGTAGCAGCTaGAGGGCGCGCAGCAGGAGGCCGACGCGCGCGACCATCTCGCCG +
Preference number: 5 (lower is better)
Translates to: PRSAGWASRWPHSSS*RARSRRPTRATISP
Trigger: CGGCGAGATGGTCGCGCGCGTCGGCCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCCCGCGGAGCGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS GCA 90 bp TGCGCCGCCCCCGCACGGAGAGGGACTGTCCCGGGGTTTCGCCAGTaGCCTAGCTGCGCGCTCTGGGCCGCTCCTCCGCTGCCCTTCGCC +
Preference number: 5 (lower is better)
Translates to: CAAPARRGTVPGFRQ*PSCALWAAPPLPFA
Trigger: GGCGAAGGGCAGCGGAGGAGCGGCCCAGAGCGCGCAGCTAGGGCACTGGCGAAACCCCGGGACAGTCCCTCTCCGTGCGGGGGCGGCGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS CCA 90 bp TTGCGCAGCTCCTGGCCTCCGCGCTCCGCGGGCTGGGCGTCCAGGTaGCCCCACAGTAGCAGCTGCAGGGCGCGCAGCAGGAGGCCGACG +
Preference number: 5 (lower is better)
Translates to: LRSSWPPRSAGWASR*PHSSSCRARSRRPT
Trigger: CGTCGGCCTCCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCCCGCGGAGCGCGGAGGCCAGGAGCTGCGCAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS CCA 90 bp AGAGGGACTGTCCCGGGGTTTCGCCAGTGCCCTAGCTGCGCGCTCTaGGCCGCTCCTCCGCTGCCCTTCGCCGGGAGCCGGCCAGACGTC +
Preference number: 5 (lower is better)
Translates to: RGTVPGFRQCPSCAL*AAPPLPFAGSRPDV
Trigger: GACGTCTGGCCGGCTCCCGGCGAAGGGCAGCGGAGGAGCGGCCCAGAGCGCGCAGCTAGGGCACTGGCGAAACCCCGGGACAGTCCCTCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS CCA 90 bp AACAGGTTGCGCCCGCGGCGGCGGCTCAGGGACCAGCGCTCATCTTaGTCGAAGTGCGCTTCGCCGCGGCGGGGCAGGAAGGCGTGCGCC +
Preference number: 5 (lower is better)
Translates to: NRLRPRRRLRDQRSS*SKCASPRRGRKACA
Trigger: GGCGCACGCCTTCCTGCCCCGCCGCGGCGAAGCGCACTTCGACCAAGATGAGCGCTGGTCCCTGAGCCGCCGCCGCGGGCGCAACCTGTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612292.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000634159.1
CDS-3UTR CAA 90 bp AGGGAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGAATGCCTCCGCCTCCTaGCGCAGCTCCTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: REEEGGVRMAGQAPCPAQNASAS*RSSWPP
Trigger: CGGAGGCCAGGAGCTGCGCAAGGAGGCGGAGGCATT...CTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp GAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGCTGAGGGCGCTCCCCGAGTaGGCATGCCAGCAGCCCATC +
Preference number: 5 (lower is better)
Translates to: EEEGGVRMAGQAPCPAQLRALPE*ACQQPI
Trigger: GATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCT...CAGCTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS CCA 90 bp GCTGGGGCCTCCCAGAACTCCAGCGCTGAGACGTTGCTCCACAACTaGAAGGCGGCGCGCACGGCGCCCCGAACTGCCGGCTCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: AGASQNSSAETLLHN*KAARTAPRTAGSGR
Trigger: TCTGCCGGAGCCGGCAGTTCGGGGCGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGGGAGGCCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGGGAGCACCACGAACAGGTaGCGCCCGCGGCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: GGSRAPLAVPLGPARSSGSTTNR*RPRRRL
Trigger: GAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGCT...CCCGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp AGGAGGGAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACGGGGCTCTGAGACGTaGCCATCAGCTGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RREEEGGVRMAGQAPCPARGSET*PSAATS
Trigger: GGAGGTGGCAGCTGATGGCAACGTCTCAGAGCCCCG...TGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTCCCTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGAGGGCGCTCCCCGAGTaGGCATGCCAGCAGCCCATC +
Preference number: 5 (lower is better)
Translates to: LGGPAARGGCLQFGLVEARALPE*ACQQPI
Trigger: GATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCT...CGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp TCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGAGCACCACGAACAGGTaGCGCCCGCGGCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: SGVVGLHLQSPSGQHVVASTTNR*RPRRRL
Trigger: GAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGCT...CGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGACGGGGCTCTGAGACGTaGCCATCAGCTGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RVGMPAAHPGQLGGPAARRGSET*PSAATS
Trigger: GGAGGTGGCAGCTGATGGCAACGTCTCAGAGCCCCG...TCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCAGCGGCCCGAGGTGGTaGCCTGCAGTTTGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: RSPSWHASSPSRAARWPSSGPRW*PAVWPG
Trigger: ACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCT...GCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS GCA 90 bp GACGTTGCTCCACAACTGGAAGGCGGCGCGCACGGCGCCCCGAACTaGCGGCTCCGGCAGATGCTCAGGCCAGTTCACCAGGCGGTAGGA +
Preference number: 5 (lower is better)
Translates to: DVAPQLEGGAHGAPN*RLRQMLRPVHQAVG
Trigger: TCCTACCGCCTGGTGAACTGGCCTGAGCATCTGCCGGAGCCGGCAGTTCGGGGCGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCGGGCCATCAAAGGCATaGCCCAGCCCATCGTTGTGG +
Preference number: 5 (lower is better)
Translates to: RWPSGPRWLPAVWPGRGAGPSKA*PSPSLW
Trigger: CCACAACGATGGGCTGGGCAATGCCTTTGATGGCCC...GGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp AGGGAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGGGGCCATCAAAGGCATaGCCCAGCCCATCGTTGTGG +
Preference number: 5 (lower is better)
Translates to: REEEGGVRMAGQAPCPAQGPSKA*PSPSLW
Trigger: CCACAACGATGGGCTGGGCAATGCCTTTGATGGCCC...CTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp AGGGAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGTTGCCCAGCCCATCGTaGTGGTCCCCTTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: REEEGGVRMAGQAPCPAQLPSPS*WSPWKK
Trigger: CTTCTTCCAAGGGGACCACAACGATGGGCTGGGCAA...CTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp GGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTTTGCCCAGCCCATCGTaGTGGTCCCCTTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GMPAAHPGQLGGPAARGGLPSPS*WSPWKK
Trigger: CTTCTTCCAAGGGGACCACAACGATGGGCTGGGCAA...ACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGAATGCCTCCGCCTCCTaGCGCAGCTCCTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGNASAS*RSSWPP
Trigger: CGGAGGCCAGGAGCTGCGCAAGGAGGCGGAGGCATT...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGGCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGTGGAGGTGGGAGCTTaGGGGACCTGTTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: GQLGGPAARGGCLQFGLVVEVGA*GTCSLR
Trigger: CCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCAC...GACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp TCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGGTAGTAGGGCTCCACTaGCAGTCCCCCTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: SGVVGLHLQSPSGQHVVAVVGLH*QSPSGQ
Trigger: CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTAC...CGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp TCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGCACGTAGTAGCGGTGGTTGCCTGCAGTTaGGCCTGGTCGAGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: SGVVGLHLQSPSGQHVVAVVACS*AWSRRQ
Trigger: CTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCAC...CGCTACTACGTGCTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp GTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTCCCCCTCGGGCCAGAGCGGCCCGAGGTGGTaGCCTGCAGTTTGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: VLQTSGVVGLHLQSPSGQSGPRW*PAVWPG
Trigger: ACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCT...CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp GCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGATCGTTGTGGTCCCCTaGGAAGAAGGTGAGCCGGAT +
Preference number: 5 (lower is better)
Translates to: APRVGMPAAHPGQLGGPAIVVVP*EEGEPD
Trigger: ATCCGGCTCACCTTCTTCCAAGGGGACCACAACGAT...CGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp TCGGGCCAGCACGTAGTAGCGGGCACCCTTGAAGAGGATGAGGCGGCGCAGAGGTCCAGCGCTGAGACGTaGCTCCACAACTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: SGQHVVAGTLEEDEAAQRSSAET*LHNWKA
Trigger: CGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGA...CCTCTGCGCCGCCTCATCCTCTTCAAGGGTGCCCGCTACTACGTGCTGGCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGATCGTTGTGGTCCCCTaGGAAGAAGGTGAGCCGGAT +
Preference number: 5 (lower is better)
Translates to: PAARGGCLQFGLVEAPVAIVVVP*EEGEPD
Trigger: ATCCGGCTCACCTTCTTCCAAGGGGACCACAACGAT...CGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGAGCACCACGAACAGGTaGCGCCCGCGGCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLSTTNR*RPRRRL
Trigger: GAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGCT...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGTTCAGGGCGCCTTCCTaGGGGGCTGTAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGFRAPS*GAVGVP
Trigger: TGGGACTCCTACAGCCCCCAAGGAAGGCGCCCTGAA...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGTGGTTGCCTGCAGTTaGGCCTGGTCGAGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: LPGLLQRDSEASKRGSAPVVACS*AWSRRQ
Trigger: CTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCAC...CGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCCTAGGGAAGAGAATGCCTCCGCCTCCTaGCGCAGCTCCTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: VLKPRGPIHPLLPCPREENASAS*RSSWPP
Trigger: CGGAGGCCAGGAGCTGCGCAAGGAGGCGGAGGCATT...CTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGGGGCCATCAAAGGCATaGCCCAGCCCATCGTTGTGG +
Preference number: 5 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGGPSKA*PSPSLW
Trigger: CCACAACGATGGGCTGGGCAATGCCTTTGATGGCCC...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTAATGTACAGTTGCTGTaGCCTGTCTACAGTGATGGC +
Preference number: 5 (lower is better)
Translates to: GMPAAHPGQLGGPAARGGNVQLL*PVYSDG
Trigger: GCCATCACTGTAGACAGGCAACAGCAACTGTACATT...ACCACCTCGGGCCGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGTAGTAGGGCTCCACTaGCAGTCCCCCTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: PLRLETPVPSSPSMLPGGVVGLH*QSPSGQ
Trigger: CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTAC...ACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCAGGGCGCTCCCCGAGTaGGCATGCCAGCAGCCCATC +
Preference number: 5 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFRALPE*ACQQPI
Trigger: GATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCT...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCCGGGGCTCTGAGACGTaGCCATCAGCTGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFRGSET*PSAATS
Trigger: GGAGGTGGCAGCTGATGGCAACGTCTCAGAGCCCCG...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACGTAGTAGGGCTCCACTaGCAGTCCCCCTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDVVGLH*QSPSGQ
Trigger: CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTAC...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACGTGGTTGCCTGCAGTTaGGCCTGGTCGAGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDVVACS*AWSRRQ
Trigger: CTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCAC...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp TTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTTTCCAGATGGAGGCTTaGCTGCCCGGTCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: FRTGRSPSWHASSPSRAAFQMEA*LPGLLQ
Trigger: CTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAA...AGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGTGGAGGTGGGAGCTTaGGGGACCTGTTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRVEVGA*GTCSLR
Trigger: CCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCAC...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAAC +
Preference number: 5 (lower is better)
Translates to: PAARGGCLQFGLVEAPVAFLRLI*VRCLAN
Trigger: GTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAA...CGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGTTGCCCAGCCCATCGTaGTGGTCCCCTTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRLPSPS*WSPWKK
Trigger: CTTCTTCCAAGGGGACCACAACGATGGGCTGGGCAA...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTTCAGGGCGCCTTCCTaGGGGGCTGTAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDFRAPS*GAVGVP
Trigger: TGGGACTCCTACAGCCCCCAAGGAAGGCGCCCTGAA...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGCCAGTAGCGAATGTACAGTTGCTGTaGCCTGTCTACAGTGATGGC +
Preference number: 5 (lower is better)
Translates to: PAARGGCLQFGLVEAPVANVQLL*PVYSDG
Trigger: GCCATCACTGTAGACAGGCAACAGCAACTGTACATT...CGCTACTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGGTAGTAGGGCTCCACTaGCAGTCCCCCTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQVVGLH*QSPSGQ
Trigger: CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTAC...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGGTGGTTGCCTGCAGTTaGGCCTGGTCGAGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLVVACS*AWSRRQ
Trigger: CTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCAC...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGGTGGTTGCCTGCAGTTaGGCCTGGTCGAGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: QMEALLPGLLQRDSEASKVVACS*AWSRRQ
Trigger: CTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCAC...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAAGGGCGCTCCCCGAGTaGGCATGCCAGCAGCCCATC +
Preference number: 5 (lower is better)
Translates to: GTKADRLPDGGFAARSSARALPE*ACQQPI
Trigger: GATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCT...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGGGTTCCAGATGGAGGCTTaGCTGCCCGGTCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LRLETPVPSSPSMLPGGGFQMEA*LPGLLQ
Trigger: CTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAA...CCCACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp TGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGTTCCAGATGGAGGCTTaGCTGCCCGGTCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: CPVFCRGTQRLLRGVLPRFQMEA*LPGLLQ
Trigger: CTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAA...CCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GTTTCTGAGGTGAGGAGGTGCCTTCAGAACAGGGCGCTCCCCGAGTTGGCATGCGTGGAGGTGGGAGCTTaGGGGACCTGTTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: VSEVRRCLQNRALPELACVEVGA*GTCSLR
Trigger: CCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCAC...GCATGCCAACTCGGGGAGCGCCCTGTTCTGAAGGCACCTCCTCACCTCAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGAGGCGATTTGTTACCTTGCTTaGCAAAGCGTTTCTTACGCC +
Preference number: 5 (lower is better)
Translates to: LGGPAARGGCLQFGLVEAICYLA*QSVSYA
Trigger: GGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAAT...CGCCTCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp GAAGAAGAGGGCGGCGTCAGGATGGCGGGGCAGGCCCCCTGCCCGGCACAGCTGGTACCATTTGTTACCTaGCTTTGCAAAGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: EEEGGVRMAGQAPCPAQLVPFVT*LCKAFL
Trigger: AAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTAC...CAGCTGTGCCGGGCAGGGGGCCTGCCCCGCCATCCTGACGCCGCCCTCTTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAAGCGGCCCGAGGTGGTaGCCTGCAGTTTGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GTKADRLPDGGFAARSSASGPRW*PAVWPG
Trigger: ACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCT...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAAGGGCGCTCCCCGAGTaGGCATGCCAGCAGCCCATC +
Preference number: 5 (lower is better)
Translates to: PPPPCGGDRQRQCCILQGRALPE*ACQQPI
Trigger: GATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCT...TCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GACCCCCTCTGCTCTCCTTTAAGCTGGAGCCCACGATGGTTGGTATTCATATCAAATGCCTCCGCCTCCTaGCGCAGCTCCTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: DPLCSPLSWSPRWLVFISNASAS*RSSWPP
Trigger: CGGAGGCCAGGAGCTGCGCAAGGAGGCGGAGGCATT...TGATATGAATACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCAGAGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp TCGGGCCAGCACGTAGTAGCGGGCACCCTTGAAGAGGATGAGGCGGCGCAGAGGTTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: SGQHVVAGTLEEDEAAQRLGTCS*RYPYFS
Trigger: AGAGAAGTACGGATACCTCAATGAACAGGTCCCCAA...CCTCTGCGCCGCCTCATCCTCTTCAAGGGTGCCCGCTACTACGTGCTGGCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGTCCAGCGCTGAGACGTaGCTCCACAACTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLSSAET*LHNWKA
Trigger: CGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGA...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTTGCCCAGCCCATCGTaGTGGTCCCCTTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFLPSPS*WSPWKK
Trigger: CTTCTTCCAAGGGGACCACAACGATGGGCTGGGCAA...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGGGGCCATCAAAGGCATaGCCCAGCCCATCGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LCCPVFCRGTQRLLRGVLGPSKA*PSPSLW
Trigger: CCACAACGATGGGCTGGGCAATGCCTTTGATGGCCC...CAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCAGCACCACGAACAGGTaGCGCCCGCGGCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPSTTNR*RPRRRL
Trigger: GAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGCT...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGAGCACCACGAACAGGTaGCGCCCGCGGCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQSTTNR*RPRRRL
Trigger: GAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGCT...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCGGGGCTCTGAGACGTaGCCATCAGCTGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLRGSET*PSAATS
Trigger: GGAGGTGGCAGCTGATGGCAACGTCTCAGAGCCCCG...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GCAGCTCGGTGGCCCAGCGGCCCGAGGTGGTTGCCTGCAGTTTGGCCTGGTCGATGGAGCCCACGATGGTaGGTATTCATATCAATCAAA +
Preference number: 5 (lower is better)
Translates to: AARWPSGPRWLPAVWPGRWSPRW*VFISIK
Trigger: TTTGATTGATATGAATACCAACCATCGTGGGCTCCA...TCGACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCTGGGCCACCGAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS CCA 90 bp ACCTCCCAGAAATGGCTCCCTACAGTGATGGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGCGTTTCAGGGCGCCTTCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: TSQKWLPTVMASKEE*QYLGPCVSGRLPWG
Trigger: CCCCCAAGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGCCATCACTGTAGGGAGCCATTTCTGGGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAAC +
Preference number: 5 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGFLRLI*VRCLAN
Trigger: GTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAA...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCATCCAGCGCTGAGACGTaGCTCCACAACTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: GTKADRLPDGGFAARSSASSAET*LHNWKA
Trigger: CGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGA...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGAAGCACCACGAACAGGTaGCGCCCGCGGCGGCGGCTC +
Preference number: 5 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRSTTNR*RPRRRL
Trigger: GAGCCGCCGCCGCGGGCGCAACCTGTTCGTGGTGCT...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGTTCAGGGCGCCTTCCTaGGGGGCTGTAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLFRAPS*GAVGVP
Trigger: TGGGACTCCTACAGCCCCCAAGGAAGGCGCCCTGAA...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTCGGTGGCCCAGCGTTTAAAAATGTACAGTaGCTGTTGCCTGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: APRVGMPAAHPGQLGGPAFKNVQ*LLPVYS
Trigger: ACTGTAGACAGGCAACAGCAACTGTACATTTTTAAA...CGCTGGGCCACCGAGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp GACCCCCTCTGCTCTCCTTTAAGCTGGAGCCCACGATGGTTGGTATTCATATCAGTGGTTGCCTGCAGTTaGGCCTGGTCGAGGCGCCAG +
Preference number: 5 (lower is better)
Translates to: DPLCSPLSWSPRWLVFISVVACS*AWSRRQ
Trigger: CTGGCGCCTCGACCAGGCCAAACTGCAGGCAACCAC...TGATATGAATACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCAGAGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGTTCCAGATGGAGGCTTaGCTGCCCGGTCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: QMEALLPGLLQRDSEASKFQMEA*LPGLLQ
Trigger: CTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAA...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp TCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTGGTTTTCATCCCCCTGCTaGGATCCCAGTGCTGTTACC +
Preference number: 5 (lower is better)
Translates to: SEVGDACAFIPIHASWGWFSSPC*DPSAVT
Trigger: GGTAACAGCACTGGGATCCAAGCAGGGGGATGAAAA...CCACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS CCA 90 bp AGTAGAAATCTCCATCATTCAATGACACTGCCGCAGCCTCAATGTTaGGGGGCAGCCCGACCCATCTTTCCTGCAGTGGACGGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SRNLHHSMTLPQPQC*GAARPIFPAVDGAL
Trigger: CAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGGGCTGCCCCCCAACATTGAGGCTGCGGCAGTGTCATTGAATGATGGAGATTTCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000615317.4
ENST00000619655.4
ENST00000631999.1
ENST00000632913.1
CDS-3UTR CAA 90 bp TCTGCTGAGTTTTTCATCCCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAAAATGCCTCCGCCTCCTaGCGCAGCTCCTGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: SAEFFIPLLGSQCCYLLKNASAS*RSSWPP
Trigger: CGGAGGCCAGGAGCTGCGCAAGGAGGCGGAGGCATT...TTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGGGATGAAAAACTCAGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCGTGGAGGTGGGAGCTTaGGGGACCTGTTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCVEVGA*GTCSLR
Trigger: CCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCAC...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGATCCAGCGCTGAGACGTaGCTCCACAACTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: PPPPCGGDRQRQCCILQGSSAET*LHNWKA
Trigger: CGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGA...TCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGGGGCCATCAAAGGCATaGCCCAGCCCATCGTTGTGG +
Preference number: 5 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLGPSKA*PSPSLW
Trigger: CCACAACGATGGGCTGGGCAATGCCTTTGATGGCCC...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAAGGAACTGTACCTTTAGCCTTCAGGGCGCCTTCCTaGGGGGCTGTAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: PLLGSQCCYLLKGTVPLAFRAPS*GAVGVP
Trigger: TGGGACTCCTACAGCCCCCAAGGAAGGCGCCCTGAA...GGCTAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp GACCCCCTCTGCTCTCCTTTAAGCTGGAGCCCACGATGGTTGGTATTCATATCATTCAGGGCGCCTTCCTaGGGGGCTGTAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: DPLCSPLSWSPRWLVFISFRAPS*GAVGVP
Trigger: TGGGACTCCTACAGCCCCCAAGGAAGGCGCCCTGAA...TGATATGAATACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCAGAGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGAATGTACAGTTGCTGTaGCCTGTCTACAGTGATGGC +
Preference number: 5 (lower is better)
Translates to: LPGLLQRDSEASKRGSAPNVQLL*PVYSDG
Trigger: GCCATCACTGTAGACAGGCAACAGCAACTGTACATT...CGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
CDS CCA 90 bp TACAGTTGCTGTTGCCTGTCTACAGTGATGGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGCGTTTCAGGGCGCCTTCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: YSCCCLSTVMASKEE*QYLGPCVSGRLPWG
Trigger: CCCCCAAGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGCCATCACTGTAGACAGGCAACAGCAACTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000615317.4
ENST00000632913.1
CDS-3UTR CAA 90 bp TTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTATTTGTTACCTTGCTTaGCAAAGCGTTTCTTACGCC +
Preference number: 5 (lower is better)
Translates to: FRTGRSPSWHASSPSRAAICYLA*QSVSYA
Trigger: GGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAAT...AGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGGGGTGCTGCTTGTACCATTaGTTACCTTGCTTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: PGLLQRDSEASKRGSAPGCCLYH*LPCFAK
Trigger: CTTTGCAAAGCAAGGTAACAAATGGTACAAGCAGCA...CCCCGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATCGTTGTGGTCCCCTaGGAAGAAGGTGAGCCGGAT +
Preference number: 5 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCIVVVP*EEGEPD
Trigger: ATCCGGCTCACCTTCTTCCAAGGGGACCACAACGAT...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CTGCTCCATGAAGTTCTCCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCTTCAGGGCGCCTTCCTaGGGGGCTGTAGGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: LLHEVLQALGSFLVASLGFRAPS*GAVGVP
Trigger: TGGGACTCCTACAGCCCCCAAGGAAGGCGCCCTGAA...GCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGGAGAACTTCATGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR CAA 90 bp GGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACGGGGCTCTGAGACGTaGCCATCAGCTGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: GGDRQRQCCILQGTKADRRGSET*PSAATS
Trigger: GGAGGTGGCAGCTGATGGCAACGTCTCAGAGCCCCG...TCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGGTAGTAGGGCTCCACTaGCAGTCCCCCTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQVVGLH*QSPSGQ
Trigger: CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTAC...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCAGCGGCCCGAGGTGGTaGCCTGCAGTTTGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPSGPRW*PAVWPG
Trigger: ACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCT...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp TTCAGAACAGGGCGCTCCCCGAGTTGGCATGCCAGCAGCCCATCCAGGGCAGCTTGGAGCCCACGATGGTaGGTATTCATATCAATCAAA +
Preference number: 5 (lower is better)
Translates to: FRTGRSPSWHASSPSRAAWSPRW*VFISIK
Trigger: TTTGATTGATATGAATACCAACCATCGTGGGCTCCA...AGCTGCCCTGGATGGGCTGCTGGCATGCCAACTCGGGGAGCGCCCTGTTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp AGTCCAGTCCCAGGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGAGTGGAGGTGGGAGCTTaGGGGACCTGTTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: SPVPGSAVFLAIGFKTLGVEVGA*GTCSLR
Trigger: CCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCAC...TCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCCTGGGACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp ACCCCACAAAGGGCCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAAC +
Preference number: 5 (lower is better)
Translates to: TPQRASEVGDACAFIPIHFLRLI*VRCLAN
Trigger: GTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAA...ATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGGCCCTTTGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAAC +
Preference number: 5 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFFLRLI*VRCLAN
Trigger: GTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAA...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAAC +
Preference number: 5 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDFLRLI*VRCLAN
Trigger: GTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAA...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCCCGTGCTGCTTGTACCATTaGTTACCTTGCTTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LPGLLQRDSEASKRGSAPCCLYH*LPCFAK
Trigger: CTTTGCAAAGCAAGGTAACAAATGGTACAAGCAGCA...CGGGGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGGGATGCCTCCCCAGTCCTGCAGACTTCGGGGGTAGTAGGGCTCCACTTGCAGTGCTGCTTGTACCATTaGTTACCTTGCTTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: RDASPVLQTSGVVGLHLQCCLYH*LPCFAK
Trigger: CTTTGCAAAGCAAGGTAACAAATGGTACAAGCAGCA...CTGCAAGTGGAGCCCTACTACCCCCGAAGTCTGCAGGACTGGGGAGGCATCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGATCGTTGTGGTCCCCTaGGAAGAAGGTGAGCCGGAT +
Preference number: 5 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKIVVVP*EEGEPD
Trigger: ATCCGGCTCACCTTCTTCCAAGGGGACCACAACGAT...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AAGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGATCGTTGTGGTCCCCTaGGAAGAAGGTGAGCCGGAT +
Preference number: 5 (lower is better)
Translates to: KIDPTPTSMWWGQTKTMLIVVVP*EEGEPD
Trigger: ATCCGGCTCACCTTCTTCCAAGGGGACCACAACGAT...CAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCATTGCTTTTCCTAAGATaGATCCCACCCCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: QTDFQMEALLPGLLQRDSLLFLR*IPPPPP
Trigger: TGGAGGTGGGGGTGGGATCAATCTTAGGAAAAGCAA...TGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGCCAAGAGGTCCTATTCACCCACTCCTCCCGTGCCCTAGGGAAGAGAGGTTACAGTGCTCACCTTGCTTaGCAAAGCGTTTCTTACGCC +
Preference number: 5 (lower is better)
Translates to: SQEVLFTHSSRALGKRGYSAHLA*QSVSYA
Trigger: GGCGTAAGAAACGCTTTGCAAAGCAAGGTGAGCACT...GTAACCTCTCTTCCCTAGGGCACGGGAGGAGTGGGTGAATAGGACCTCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCCGATCTCCCAGAACTTaGTCCTCAGGCTTTAGCCGA +
Preference number: 5 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCRSPRT*SSGFSR
Trigger: TCGGCTAAAGCCTGAGGACAAAGTTCTGGGAGATCG...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CAA 90 bp GACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAAGCGGCCCGAGGTGGTaGCCTGCAGTTTGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: DRQRQCCILQGTKADRLPSGPRW*PAVWPG
Trigger: ACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCT...TGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCATTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: GTKADRLPDGGFAARSSALGTCS*RYPYFS
Trigger: AGAGAAGTACGGATACCTCAATGAACAGGTCCCCAA...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCTTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCLGTCS*RYPYFS
Trigger: AGAGAAGTACGGATACCTCAATGAACAGGTCCCCAA...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGGTGGAGGTGGGAGCTTaGGGGACCTGTTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQVEVGA*GTCSLR
Trigger: CCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCAC...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp TCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCGTGGAGGTGGGAGCTTaGGGGACCTGTTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: SVFTIMVLKPRGPIHPLLVEVGA*GTCSLR
Trigger: CCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCAC...GAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCATTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAAC +
Preference number: 5 (lower is better)
Translates to: GTKADRLPDGGFAARSSAFLRLI*VRCLAN
Trigger: GTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAA...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACATTTGTTACCTTGCTTaGCAAAGCGTTTCTTACGCC +
Preference number: 5 (lower is better)
Translates to: RQTDFQMEALLPGLLQRDICYLA*QSVSYA
Trigger: GGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAAT...GTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTGCTGCTTGTACCATTaGTTACCTTGCTTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFCCLYH*LPCFAK
Trigger: CTTTGCAAAGCAAGGTAACAAATGGTACAAGCAGCA...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp TTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGAGGGGTTCTGCCTGCTGCTTGTACCATTaGTTACCTTGCTTTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LLPGLLQRDSEASKRGSACCLYH*LPCFAK
Trigger: CTTTGCAAAGCAAGGTAACAAATGGTACAAGCAGCA...GGCAGAACCCCTCTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCTCCAGCGCTGAGACGTaGCTCCACAACTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFSSAET*LHNWKA
Trigger: CGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGA...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp TACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCTCAGGCTTTAGCCGAGGGCCATCAAAGGCATaGCCCAGCCCATCGTTGTGG +
Preference number: 5 (lower is better)
Translates to: YLHSQCRSPRTLSSGFSRGPSKA*PSPSLW
Trigger: CCACAACGATGGGCTGGGCAATGCCTTTGATGGCCC...TCGGCTAAAGCCTGAGGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CAA 90 bp TCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCCGATCTCCCAGAACTTTGCGGGGCTCTGAGACGTaGCCATCAGCTGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: SLGRCCYLHSQCRSPRTLRGSET*PSAATS
Trigger: GGAGGTGGCAGCTGATGGCAACGTCTCAGAGCCCCG...CAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615317.4
ENST00000619655.4
CDS-3UTR CAA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGTTGCTTTTCCTAAGATaGATCCCACCCCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKLLFLR*IPPPPP
Trigger: TGGAGGTGGGGGTGGGATCAATCTTAGGAAAAGCAA...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGGAGAAGGGCACAGTCTaGCAAAATGGTCTCGAATTT +
Preference number: 5 (lower is better)
Translates to: QMEALLPGLLQRDSEASKEKGTV*QNGLEF
Trigger: AAATTCGAGACCATTTTGCAAGACTGTGCCCTTCTC...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGTTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKLGTCS*RYPYFS
Trigger: AGAGAAGTACGGATACCTCAATGAACAGGTCCCCAA...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGATTGCCCAGCCCATCGTaGTGGTCCCCTTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRLPSPS*WSPWKK
Trigger: CTTCTTCCAAGGGGACCACAACGATGGGCTGGGCAA...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CCTCTGAGGTTGGAGACGCCTGTGCCTTCATCCCCATCCATGCTTCCTGGGGGTTTTAAAAATGTACAGTaGCTGTTGCCTGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: PLRLETPVPSSPSMLPGGFKNVQ*LLPVYS
Trigger: ACTGTAGACAGGCAACAGCAACTGTACATTTTTAAA...ACCCCCAGGAAGCATGGATGGGGATGAAGGCACAGGCGTCTCCAACCTCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp GGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCGTAGTAGGGCTCCACTaGCAGTCCCCCTCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: GSFLVASLGRCCYLHSQCVVGLH*QSPSGQ
Trigger: CTGGCCCGAGGGGGACTGCAAGTGGAGCCCTACTAC...GCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CAA 90 bp GGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCAGCGGCCCGAGGTGGTaGCCTGCAGTTTGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GSFLVASLGRCCYLHSQCSGPRW*PAVWPG
Trigger: ACCAGGCCAAACTGCAGGCAACCACCTCGGGCCGCT...GCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CAA 90 bp TACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCTCAGGCTTTAGCCGATTCCAGATGGAGGCTTaGCTGCCCGGTCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: YLHSQCRSPRTLSSGFSRFQMEA*LPGLLQ
Trigger: CTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAA...TCGGCTAAAGCCTGAGGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CAA 90 bp CTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCATCTGGGACCCTTTTTaGCTTTTCCTAAGATTGATC +
Preference number: 5 (lower is better)
Translates to: LPDGGFAARSSAEGLRGFIWDPF*LFLRLI
Trigger: GATCAATCTTAGGAAAAGCAAAAAAGGGTCCCAGAT...GAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGCAGTGCTGTTACCTCTaGAAAGGAACTGTACCTTTA +
Preference number: 5 (lower is better)
Translates to: QMEALLPGLLQRDSEASKQCCYL*KGTVPL
Trigger: TAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTG...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp TGCCCTAGGGAAGAGAGGTTACTGACAAAGTCCAGTCCCAGGCTCAGCTGTTTTTTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: CPREERLLTKSSPRLSCFLGTCS*RYPYFS
Trigger: AGAGAAGTACGGATACCTCAATGAACAGGTCCCCAA...AAAACAGCTGAGCCTGGGACTGGACTTTGTCAGTAACCTCTCTTCCCTAGGGCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp AAGTCCAGTCCCAGGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGTTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: KSSPRLSCFPSHWLQDIGLGTCS*RYPYFS
Trigger: AGAGAAGTACGGATACCTCAATGAACAGGTCCCCAA...CCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCCTGGGACTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGGTGGAGGTGGGAGCTTaGGGGACCTGTTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMEVEVGA*GTCSLR
Trigger: CCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCAC...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGTCCAGTCCCAGGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGATTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAAC +
Preference number: 5 (lower is better)
Translates to: SPVPGSAVFLAIGFKTLGFLRLI*VRCLAN
Trigger: GTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAA...TCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCCTGGGACTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp GGAACAAAGGCAGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAATTTGTTACCTTGCTTaGCAAAGCGTTTCTTACGCC +
Preference number: 5 (lower is better)
Translates to: GTKADRLPDGGFAARSSAICYLA*QSVSYA
Trigger: GGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAAT...TGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCTGCCTTTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGATTGATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTTGTTACCTTGCTTaGCAAAGCGTTTCTTACGCC +
Preference number: 5 (lower is better)
Translates to: RLIPPPPPCGGDRQRQCCICYLA*QSVSYA
Trigger: GGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAAT...GCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATCAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGGTACCATTTGTTACCTaGCTTTGCAAAGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: QMEALLPGLLQRDSEASKVPFVT*LCKAFL
Trigger: AAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTAC...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp TCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCCGATCTCCCAGAACTTTGTCCAGCGCTGAGACGTaGCTCCACAACTGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: SLGRCCYLHSQCRSPRTLSSAET*LHNWKA
Trigger: CGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGA...CAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CAA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGAATCGTTGTGGTCCCCTaGGAAGAAGGTGAGCCGGAT +
Preference number: 5 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRIVVVP*EEGEPD
Trigger: ATCCGGCTCACCTTCTTCCAAGGGGACCACAACGAT...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGAGGCTTCTAAGATCTGGGACCCTTTTTaGCTTTTCCTAAGATTGATC +
Preference number: 5 (lower is better)
Translates to: QMEALLPGLLQRDSEASKIWDPF*LFLRLI
Trigger: GATCAATCTTAGGAAAAGCAAAAAAGGGTCCCAGAT...CTTAGAAGCCTCTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCTTTTCATCCCCCTGCTaGGATCCCAGTGCTGTTACC +
Preference number: 5 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPFSSPC*DPSAVT
Trigger: GGTAACAGCACTGGGATCCAAGCAGGGGGATGAAAA...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAGAAGGGCACAGTCTaGCAAAATGGTCTCGAATTT +
Preference number: 5 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKEKGTV*QNGLEF
Trigger: AAATTCGAGACCATTTTGCAAGACTGTGCCCTTCTC...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp AAGTCCAGTCCCAGGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGATTGGCTTCAAGACATaGGGAAATCTTGGCCTAGCC +
Preference number: 5 (lower is better)
Translates to: KSSPRLSCFPSHWLQDIGIGFKT*GNLGLA
Trigger: GGCTAGGCCAAGATTTCCCAATGTCTTGAAGCCAAT...CCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCCTGGGACTGGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp GATCCCACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTGTACCATTTGTTACCTaGCTTTGCAAAGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: DPTPTSMWWGQTKTMLHSVPFVT*LCKAFL
Trigger: AAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTAC...AGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTGGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AGACAGACTTCCAGATGGAGGCTTTGCTGCCCGGTCTTCTGCAGAGGGACTCAGTTTAAAAATGTACAGTaGCTGTTGCCTGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: RQTSRWRLCCPVFCRGTQFKNVQ*LLPVYS
Trigger: ACTGTAGACAGGCAACAGCAACTGTACATTTTTAAA...CTGAGTCCCTCTGCAGAAGACCGGGCAGCAAAGCCTCCATCTGGAAGTCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
CDS-3UTR CAA 90 bp TCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCAGTGCTCACCTTGCTTaGCAAAGCGTTTCTTACGCC +
Preference number: 5 (lower is better)
Translates to: SVFTIMVLKPRGPIHPLLSAHLA*QSVSYA
Trigger: GGCGTAAGAAACGCTTTGCAAAGCAAGGTGAGCACT...GAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS GCA 90 bp GGGAAATCTTGGCCTAGCCGGATTTTAACAGTGCTCACCTTGCTTTaGAAAGCGTTTCTTACGCCTCATTTTGGTCCGGTGTCTAGCAAA +
Preference number: 5 (lower is better)
Translates to: GKSWPSRILTVLTLL*KAFLTPHFGPVSSK
Trigger: TTTGCTAGACACCGGACCAAAATGAGGCGTAAGAAACGCTTTGCAAAGCAAGGTGAGCACTGTTAAAATCCGGCTAGGCCAAGATTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612672.1
ENST00000616383.1
ENST00000632268.1
ENST00000632360.1
CDS CCA 90 bp CTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGAAATCTTaGCCTAGCCGGATTTTAACAGTGCTCACCTTGCTTTGCAAAGCG +
Preference number: 5 (lower is better)
Translates to: LSCFPSHWLQDIGKS*PSRILTVLTLLCKA
Trigger: CGCTTTGCAAAGCAAGGTGAGCACTGTTAAAATCCGGCTAGGCCAAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612672.1
ENST00000616383.1
ENST00000632268.1
ENST00000632360.1
CDS-3UTR CAA 90 bp GTCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAAC +
Preference number: 5 (lower is better)
Translates to: VCIHNHGPQAKRSYSPTPFLRLI*VRCLAN
Trigger: GTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAA...AGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp CACCCCCACCTCCATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGTACCATTTGTTACCTaGCTTTGCAAAGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: HPHLHVVGTDKDNAAFFKVPFVT*LCKAFL
Trigger: AAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTAC...CTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACATGGAGGTGGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCTTGCTTTTCCTAAGATaGATCCCACCCCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFLLFLR*IPPPPP
Trigger: TGGAGGTGGGGGTGGGATCAATCTTAGGAAAAGCAA...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp GTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTCCCGTTAACAGTGCTCACCTaGCTTTGCAAAGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: VFTIMVLKPRGPIHPLLPLTVLT*LCKAFL
Trigger: AAGAAACGCTTTGCAAAGCAAGGTGAGCACTGTTAA...CGGGAGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp GGCTCAGCTGTTTTCCTAGCCATTGGCTTCAAGACATTGGGAAATCTTGGCCTAATTGGCTTCAAGACATaGGGAAATCTTGGCCTAGCC +
Preference number: 5 (lower is better)
Translates to: GSAVFLAIGFKTLGNLGLIGFKT*GNLGLA
Trigger: GGCTAGGCCAAGATTTCCCAATGTCTTGAAGCCAAT...TAGGCCAAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS CCA 90 bp TTACTGACAAAGTCCAGTCCCAGGCTCAGCTGTTTTCCTAGCCATTaGCTTCAAGACATTGGGAAATCTTGGCCTAGCCGGATTTTAACA +
Preference number: 5 (lower is better)
Translates to: LLTKSSPRLSCFPSH*LQDIGKSWPSRILT
Trigger: TGTTAAAATCCGGCTAGGCCAAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAAACAGCTGAGCCTGGGACTGGACTTTGTCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612672.1
ENST00000616383.1
ENST00000632268.1
ENST00000632360.1
CDS-3UTR CAA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGATTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRLGTCS*RYPYFS
Trigger: AGAGAAGTACGGATACCTCAATGAACAGGTCCCCAA...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp CCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCT +
Preference number: 5 (lower is better)
Translates to: PGTRFLSCCFFRPLLLLTLGTCS*RYPYFS
Trigger: AGAGAAGTACGGATACCTCAATGAACAGGTCCCCAA...TGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CAA 90 bp CCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAAGGAACTGTACCTTTAGCCGTACCATTTGTTACCTaGCTTTGCAAAGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: PLLGSQCCYLLKGTVPLAVPFVT*LCKAFL
Trigger: AAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTAC...GGCTAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp GGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCAATGTACAGTTGCTGTaGCCTGTCTACAGTGATGGC +
Preference number: 5 (lower is better)
Translates to: GTDKDNAAFFKEQRQTDFNVQLL*PVYSDG
Trigger: GCCATCACTGTAGACAGGCAACAGCAACTGTACATT...GAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp CCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACAAATGTACAGTTGCTGTaGCCTGTCTACAGTGATGGC +
Preference number: 5 (lower is better)
Translates to: PGTRFLSCCFFRPLLLLTNVQLL*PVYSDG
Trigger: GCCATCACTGTAGACAGGCAACAGCAACTGTACATT...TGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615317.4
CDS-3UTR CAA 90 bp CCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACACGATCTCCCAGAACTTaGTCCTCAGGCTTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: PGTRFLSCCFFRPLLLLTRSPRT*SSGFEE
Trigger: TTCTTCAAAGCCTGAGGACAAAGTTCTGGGAGATCG...TGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615317.4
CDS-3UTR CAA 90 bp CCCCTGCTTGGATCCCAGTGCTGTTACCTCTTGAAAGGAACTGTACCTTTAGCCTTTAAAAATGTACAGTaGCTGTTGCCTGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: PLLGSQCCYLLKGTVPLAFKNVQ*LLPVYS
Trigger: ACTGTAGACAGGCAACAGCAACTGTACATTTTTAAA...GGCTAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTGGGATCCAAGCAGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp CTGCTCCATGAAGTTCTCCAGGCACTCGGTTCCTTTCTTGTTGCTTCTTTAGGCATCTGGGACCCTTTTTaGCTTTTCCTAAGATTGATC +
Preference number: 5 (lower is better)
Translates to: LLHEVLQALGSFLVASLGIWDPF*LFLRLI
Trigger: GATCAATCTTAGGAAAAGCAAAAAAGGGTCCCAGAT...GCCTAAAGAAGCAACAAGAAAGGAACCGAGTGCCTGGAGAACTTCATGGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619655.4
CDS-3UTR CAA 90 bp GGGCACAGTCTTGCAAAATGGTCTCGAATTTCTCTGCTGAGTTTTTCATCCCCCCAGTGCTGTTACCTCTaGAAAGGAACTGTACCTTTA +
Preference number: 5 (lower is better)
Translates to: GHSLAKWSRISLLSFSSPQCCYL*KGTVPL
Trigger: TAAAGGTACAGTTCCTTTCAAGAGGTAACAGCACTG...GGGGGATGAAAAACTCAGCAGAGAAATTCGAGACCATTTTGCAAGACTGTGCCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000605424.6
ENST00000611911.4
CDS-3UTR CAA 90 bp GTCTGTATTCACAATCATGGTCCTCAAGCCAAGAGGTCCTATTCACCCACTCCTTTAACAGTGCTCACCTaGCTTTGCAAAGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: VCIHNHGPQAKRSYSPTPLTVLT*LCKAFL
Trigger: AAGAAACGCTTTGCAAAGCAAGGTGAGCACTGTTAA...AGGAGTGGGTGAATAGGACCTCTTGGCTTGAGGACCATGATTGTGAATACAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612672.1
ENST00000632360.1
CDS-3UTR CAA 90 bp TGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGATCTGGGACCCTTTTTaGCTTTTCCTAAGATTGATC +
Preference number: 5 (lower is better)
Translates to: WWGQTKTMLHSSRNKGRQIWDPF*LFLRLI
Trigger: GATCAATCTTAGGAAAAGCAAAAAAGGGTCCCAGAT...CTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp AAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGACAGACTTCCAGATGGAGATTTGTTACCTTGCTTaGCAAAGCGTTTCTTACGCC +
Preference number: 5 (lower is better)
Translates to: KDNAAFFKEQRQTDFQMEICYLA*QSVSYA
Trigger: GGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAAT...CTCCATCTGGAAGTCTGTCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS-3UTR CAA 90 bp ATGTGGTGGGGACAGACAAAGACAATGCTGCATTCTTCAAGGAACAAAGGCAGAGTACCATTTGTTACCTaGCTTTGCAAAGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: MWWGQTKTMLHSSRNKGRVPFVT*LCKAFL
Trigger: AAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTAC...TCTGCCTTTGTTCCTTGAAGAATGCAGCATTGTCTTTGTCTGTCCCCACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000619655.4
ENST00000631999.1
CDS GCA 90 bp TTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATaGCGATCTCCCAGAACTTTGTCCTCAGGCTTTGAAGAAGTAGAA +
Preference number: 5 (lower is better)
Translates to: FLVASLGRCCYLHSQ*RSPRTLSSGFEEVE
Trigger: TTCTACTTCTTCAAAGCCTGAGGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615317.4
CDS-3UTR CAA 90 bp GGTTCCTTTCTTGTTGCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATGCTTTAAAAATGTACAGTaGCTGTTGCCTGTCTACAGT +
Preference number: 5 (lower is better)
Translates to: GSFLVASLGRCCYLHSQCFKNVQ*LLPVYS
Trigger: ACTGTAGACAGGCAACAGCAACTGTACATTTTTAAA...GCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGCAACAAGAAAGGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615317.4
CDS GCA 72 bp GGAGGCCGACGCGCGCGACCATCTCGCCGCCTCCGGTaGAGCCCGGCTCGGGGAGCTACTGCGCGCAGGGAA +
Preference number: 6 (lower is better)
Translates to: GGRRARPSRRLR*SPARGATARRE
Trigger: TTCCCTGCGCGCAGTAGCTCCCCGAGCCGGGCTGCACCGGAGGCGGCGAGATGGTCGCGCGCGTCGGCCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS CCA 72 bp GTCCCGGGGTTTCGCCAGTGCCCTAGCTGCGCGCTCTaGGCCGCTCCTCCGCTGCCCTTCGCCGGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: VPGFRQCPSCAL*AAPPLPFAGSR
Trigger: CCGGCTCCCGGCGAAGGGCAGCGGAGGAGCGGCCCAGAGCGCGCAGCTAGGGCACTGGCGAAACCCCGGGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS CCA 72 bp TCCTGGCCTCCGCGCTCCGCGGGCTGGGCGTCCAGGTaGCCCCACAGTAGCAGCTGCAGGGCGCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SWPPRSAGWASR*PHSSSCRARSR
Trigger: CCTGCTGCGCGCCCTGCAGCTGCTACTGTGGGGCCACCTGGACGCCCAGCCCGCGGAGCGCGGAGGCCAGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS CCA 72 bp CGCCCGCGGCGGCGGCTCAGGGACCAGCGCTCATCTTaGTCGAAGTGCGCTTCGCCGCGGCGGGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: RPRRRLRDQRSS*SKCASPRRGRK
Trigger: CTTCCTGCCCCGCCGCGGCGAAGCGCACTTCGACCAAGATGAGCGCTGGTCCCTGAGCCGCCGCCGCGGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612292.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000634159.1
CDS GCA 72 bp CCCGCACGGAGAGGGACTGTCCCGGGGTTTCGCCAGTaGCCTAGCTGCGCGCTCTGGGCCGCTCCTCCGCTG +
Preference number: 6 (lower is better)
Translates to: PARRGTVPGFRQ*PSCALWAAPPL
Trigger: CAGCGGAGGAGCGGCCCAGAGCGCGCAGCTAGGGCACTGGCGAAACCCCGGGACAGTCCCTCTCCGTGCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS CAA 90 bp GAACAGGTTGCGCCCGCGGCGGCGGCTCAGGGACCAGCGCTCATCTaGGTCGAAGTGCGCTTCGCCGCGGCGGGGCAGGAAGGCGTGCGC +
Preference number: 6 (lower is better)
Translates to: EQVAPAAAAQGPALI*VEVRFAAAGQEGVR
Trigger: GCGCACGCCTTCCTGCCCCGCCGCGGCGAAGCGCACTTCGACCAAGATGAGCGCTGGTCCCTGAGCCGCCGCCGCGGGCGCAACCTGTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612292.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000634159.1
CDS GCA 72 bp TCGAAGTGCGCTTCGCCGCGGCGGGGCAGGAAGGCGTaGGCCAGGGCGCCCCCTGGGCCATCAAAGGCATTG +
Preference number: 6 (lower is better)
Translates to: SKCASPRRGRKA*ARAPPGPSKAL
Trigger: CAATGCCTTTGATGGCCCAGGGGGCGCCCTGGCGCACGCCTTCCTGCCCCGCCGCGGCGAAGCGCACTTCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS CAA 72 bp GTGGCTGGGGCCTCCCAGAACTCCAGCGCTGAGACGTaGCTCCACAACTGGAAGGCGGCGCGCACGGCGCCC +
Preference number: 6 (lower is better)
Translates to: VAGASQNSSAET*LHNWKAARTAP
Trigger: GGGCGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGGGAGGCCCCAGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS TCA 72 bp GGGGCCTGTGGCTGGGGCCTCCCAGAACTCCAGCGCTaGGACGTTGCTCCACAACTGGAAGGCGGCGCGCAC +
Preference number: 6 (lower is better)
Translates to: GACGWGLPELQR*DVAPQLEGGAH
Trigger: GTGCGCGCCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGGGAGGCCCCAGCCACAGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS GCA 72 bp TCGAAGTGCGCTTCGCCGCGGCGGGGCAGGAAGGCGTaGGCCAGGGCGCCCCCTTGCTTTGCAAAGCGTTTC +
Preference number: 6 (lower is better)
Translates to: SKCASPRRGRKA*ARAPPCFAKRF
Trigger: GAAACGCTTTGCAAAGCAAGGGGGCGCCCTGGCGCACGCCTTCCTGCCCCGCCGCGGCGAAGCGCACTTCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612292.1
ENST00000634159.1
CDS CCA 72 bp TCCCAGAACTCCAGCGCTGAGACGTTGCTCCACAACTaGAAGGCGGCGCGCACGGCGCCCCGAACTGCCGGC +
Preference number: 6 (lower is better)
Translates to: SQNSSAETLLHN*KAARTAPRTAG
Trigger: GCCGGCAGTTCGGGGCGCCGTGCGCGCCGCCTTCCAGTTGTGGAGCAACGTCTCAGCGCTGGAGTTCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS TCA 72 bp CATACAGGCTCTGCACGGCCAGCACGTCGTCCCAGCTaGGCAGCGCGTCGCGGCCCAGCCTCTTGTAGTAGG +
Preference number: 6 (lower is better)
Translates to: HTGSARPARRPS*AARRGPASCSR
Trigger: CCTACTACAAGAGGCTGGGCCGCGACGCGCTGCTCAGCTGGGACGACGTGCTGGCCGTGCAGAGCCTGTATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612292.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000634159.1
CDS CCA 72 bp TTGGTATCTGTAACCCCGCAGCGGGGACGAGTCATCTaGCGCAGGGTGGCGCGGTCCAACACGCCGCTGACA +
Preference number: 6 (lower is better)
Translates to: LVSVTPQRGRVI*RRVARSNTPLT
Trigger: TGTCAGCGGCGTGTTGGACCGCGCCACCCTGCGCCAGATGACTCGTCCCCGCTGCGGGGTTACAGATACCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612292.1
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000616383.1
ENST00000619655.4
ENST00000631999.1
ENST00000632268.1
ENST00000632360.1
ENST00000634159.1
CDS CAA 90 bp GGCAGCCCGACCCATCTTTCCTGCAGTGGACGGGGCTCTGAGACGTaGCCATCAGCTGCCACCTCCCAGAAATGGCTCCCTACAGTGATG +
Preference number: 6 (lower is better)
Translates to: GSPTHLSCSGRGSET*PSAATSQKWLPTVM
Trigger: CATCACTGTAGGGAGCCATTTCTGGGAGGTGGCAGCTGATGGCAACGTCTCAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619655.4
ENST00000631999.1
CDS CCA 72 bp TCAAAGGCATTGCCCAGCCCATCGTTGTGGTCCCCTTaGAAGAAGGTGAGCCGGATGTCAGCGGGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: SKALPSPSLWSP*KKVSRMSAGPV
Trigger: CACAGGCCCCGCTGACATCCGGCTCACCTTCTTCCAAGGGGACCACAACGATGGGCTGGGCAATGCCTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS CCA 72 bp CCTGGGCCATCAAAGGCATTGCCCAGCCCATCGTTGTaGTCCCCTTGGAAGAAGGTGAGCCGGATGTCAGCG +
Preference number: 6 (lower is better)
Translates to: PGPSKALPSPSL*SPWKKVSRMSA
Trigger: CGCTGACATCCGGCTCACCTTCTTCCAAGGGGACCACAACGATGGGCTGGGCAATGCCTTTGATGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS CAA 72 bp CCCCCTGGGCCATCAAAGGCATTGCCCAGCCCATCGTaGTGGTCCCCTTGGAAGAAGGTGAGCCGGATGTCA +
Preference number: 6 (lower is better)
Translates to: PPGPSKALPSPS*WSPWKKVSRMS
Trigger: TGACATCCGGCTCACCTTCTTCCAAGGGGACCACAACGATGGGCTGGGCAATGCCTTTGATGGCCCAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS CCA 72 bp CAGGTCTCAAAGTCAGTGAACAGCTTTCCTGGGAGCTaGACGGCCACTGAGCCCCCTAGGGGCTTCCCATAC +
Preference number: 6 (lower is better)
Translates to: QVSKSVNSFPGS*TATEPPRGFPY
Trigger: GTATGGGAAGCCCCTAGGGGGCTCAGTGGCCGTCCAGCTCCCAGGAAAGCTGTTCACTGACTTTGAGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS CAA 90 bp GGCAGCCCGACCCATCTTTCCTGCAGTGGACGGGGCTCTGAGACGTaGCCATCAGCTGCCACCTCCCAGAAATGGCTCCCTTTAAAAATG +
Preference number: 6 (lower is better)
Translates to: GSPTHLSCSGRGSET*PSAATSQKWLPLKM
Trigger: CATTTTTAAAGGGAGCCATTTCTGGGAGGTGGCAGCTGATGGCAACGTCTCAGAGCCCCGTCCACTGCAGGAAAGATGGGTCGGGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000615317.4
ENST00000632913.1
CDS CAA 90 bp GCATCGCTGAATCGAGTGGAGGTGGGAGCTTTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCTAGGAATGCCTCCGCCTCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: ASLNRVEVGALGTCS*RYPYFSRNASASLR
Trigger: GCGCAAGGAGGCGGAGGCATTCCTAGAGAAGTACGGATACCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCACTCGATTCAGCGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS CAA 90 bp GGAAGAGTGGCAGTATTTAGGGCCCTGCGTTTCAGGGCGCCTTCCTaGGGGGCTGTAGGAGTCCCAGGTCTCAAAGTCAGTGAACAGCTT +
Preference number: 6 (lower is better)
Translates to: GRVAVFRALRFRAPS*GAVGVPGLKVSEQL
Trigger: AAGCTGTTCACTGACTTTGAGACCTGGGACTCCTACAGCCCCCAAGGAAGGCGCCCTGAAACGCAGGGCCCTAAATACTGCCACTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS CAA 90 bp GCCAGGGCGCCCCCTTGCTTTGCAAAGCGTTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAACAAGTCACTGATCCTCTCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: ARAPPCFAKRFLRLI*VRCLANKSLILSAQ
Trigger: CTGGGCTGAGAGGATCAGTGACTTGTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAAACGCTTTGCAAAGCAAGGGGGCGCCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612292.1
ENST00000634159.1
CDS CAA 90 bp GCATCGCTGAATCGAGTGGAGGTGGGAGCTTTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCTAGGAATGCCTGCGGGAGAGAGGAA +
Preference number: 6 (lower is better)
Translates to: ASLNRVEVGALGTCS*RYPYFSRNACGREE
Trigger: TTCCTCTCTCCCGCAGGCATTCCTAGAGAAGTACGGATACCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCACTCGATTCAGCGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616383.1
ENST00000632268.1
CDS TCA 72 bp ATCGAGTGGAGGTGGGAGCTTTGGGGACCTGTTCATTaGGGTATCCGTACTTCTCTAGGAATGCCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: IEWRWELWGPVH*GIRTSLGMPPP
Trigger: AGGCGGAGGCATTCCTAGAGAAGTACGGATACCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCACTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS TCA 72 bp ATCGAGTGGAGGTGGGAGCTTTGGGGACCTGTTCATTaGGGTATCCGTACTTCTCTAGGAATGCCTGCGGGA +
Preference number: 6 (lower is better)
Translates to: IEWRWELWGPVH*GIRTSLGMPAG
Trigger: TCCCGCAGGCATTCCTAGAGAAGTACGGATACCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCACTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616383.1
ENST00000632268.1
CDS CCA 72 bp TGTTGCCTGTCTACAGTGATGGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGCGTTTCAGGGCGCCTT +
Preference number: 6 (lower is better)
Translates to: CCLSTVMASKEE*QYLGPCVSGRL
Trigger: AAGGCGCCCTGAAACGCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGCCATCACTGTAGACAGGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000615317.4
ENST00000632913.1
CDS CCA 72 bp AAATGGCTCCCTACAGTGATGGCATCGAAGGAAGAGTaGCAGTATTTAGGGCCCTGCGTTTCAGGGCGCCTT +
Preference number: 6 (lower is better)
Translates to: KWLPTVMASKEE*QYLGPCVSGRL
Trigger: AAGGCGCCCTGAAACGCAGGGCCCTAAATACTGCCACTCTTCCTTCGATGCCATCACTGTAGGGAGCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619655.4
ENST00000631999.1
CDS CAA 72 bp AATCGAGTGGAGGTGGGAGCTTTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCTAGGAATGCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: NRVEVGALGTCS*RYPYFSRNASA
Trigger: GGCGGAGGCATTCCTAGAGAAGTACGGATACCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCACTCGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
ENST00000632360.1
CDS CAA 72 bp AATCGAGTGGAGGTGGGAGCTTTGGGGACCTGTTCATaGAGGTATCCGTACTTCTCTAGGAATGCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: NRVEVGALGTCS*RYPYFSRNACG
Trigger: CCCGCAGGCATTCCTAGAGAAGTACGGATACCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCACTCGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616383.1
ENST00000632268.1
CDS CAA 72 bp CTGATGGCATCGCTGAATCGAGTGGAGGTGGGAGCTTaGGGGACCTGTTCATTGAGGTATCCGTACTTCTCT +
Preference number: 6 (lower is better)
Translates to: LMASLNRVEVGA*GTCSLRYPYFS
Trigger: AGAGAAGTACGGATACCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCACTCGATTCAGCGATGCCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000612672.1
ENST00000613289.2
ENST00000615136.4
ENST00000616383.1
ENST00000619655.4
ENST00000631999.1
ENST00000632268.1
ENST00000632360.1
CDS GCA 72 bp TGGCCTAGCCGGATTTTAACAGTGCTCACCTTGCTTTaGAAAGCGTTTCTTACGCCTCATTTTGGTCCGGTG +
Preference number: 6 (lower is better)
Translates to: WPSRILTVLTLL*KAFLTPHFGPV
Trigger: CACCGGACCAAAATGAGGCGTAAGAAACGCTTTGCAAAGCAAGGTGAGCACTGTTAAAATCCGGCTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612672.1
ENST00000616383.1
ENST00000632268.1
ENST00000632360.1
CDS CAA 72 bp CCCCCTTGCTTTGCAAAGCGTTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAACAAGTCACTGATCCTC +
Preference number: 6 (lower is better)
Translates to: PPCFAKRFLRLI*VRCLANKSLIL
Trigger: GAGGATCAGTGACTTGTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAAACGCTTTGCAAAGCAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612292.1
ENST00000634159.1
CDS CCA 72 bp GACCCCCTCTGCTCTCCTTTAAGCTGGAGCCCACGATaGTTGGTATTCATATCAATCAAACGGATTGCACTT +
Preference number: 6 (lower is better)
Translates to: DPLCSPLSWSPR*LVFISIKRIAL
Trigger: AAGTGCAATCCGTTTGATTGATATGAATACCAACCATCGTGGGCTCCAGCTTAAAGGAGAGCAGAGGGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613289.2
ENST00000615136.4
CDS CAA 90 bp GACATTGGGAAATCTTGGCCTAGCCGGATTTTAACAGTGCTCACCTaGCTTTGCAAAGCGTTTCTTACGCCTCATTTTGGTCCGGTGTCT +
Preference number: 6 (lower is better)
Translates to: DIGKSWPSRILTVLT*LCKAFLTPHFGPVS
Trigger: AGACACCGGACCAAAATGAGGCGTAAGAAACGCTTTGCAAAGCAAGGTGAGCACTGTTAAAATCCGGCTAGGCCAAGATTTCCCAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612672.1
ENST00000616383.1
ENST00000632268.1
ENST00000632360.1
CDS CAA 90 bp TACCATTTGTTACCTTGCTTTGCAAAGCGTTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAACAAGTCACTGATCCTCTCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: YHLLPCFAKRFLRLI*VRCLANKSLILSAQ
Trigger: CTGGGCTGAGAGGATCAGTGACTTGTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAAACGCTTTGCAAAGCAAGGTAACAAATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS CAA 72 bp CACCTCCCAGAAATGGCTCCCTTTAAAAATGTACAGTaGCTGTTGCCTGTCTACAGTGATGGCATCGAAGGA +
Preference number: 6 (lower is better)
Translates to: HLPEMAPFKNVQ*LLPVYSDGIEG
Trigger: TCCTTCGATGCCATCACTGTAGACAGGCAACAGCAACTGTACATTTTTAAAGGGAGCCATTTCTGGGAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000615317.4
ENST00000632913.1
CDS CAA 72 bp TCACCTTGCTTTGCAAAGCGTTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAACAAGTCACTGATCCTC +
Preference number: 6 (lower is better)
Translates to: SPCFAKRFLRLI*VRCLANKSLIL
Trigger: GAGGATCAGTGACTTGTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAAACGCTTTGCAAAGCAAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612672.1
ENST00000616383.1
ENST00000632268.1
ENST00000632360.1
CDS CCA 72 bp TTTCCTAGCCATTGGCTTCAAGACATTGGGAAATCTTaGCCTAGCCGGATTTTAACAGTGCTCACCTTGCTT +
Preference number: 6 (lower is better)
Translates to: FPSHWLQDIGKS*PSRILTVLTLL
Trigger: AAGCAAGGTGAGCACTGTTAAAATCCGGCTAGGCCAAGATTTCCCAATGTCTTGAAGCCAATGGCTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000612672.1
ENST00000616383.1
ENST00000632268.1
ENST00000632360.1
CDS CAA 72 bp TTACCTTGCTTTGCAAAGCGTTTCTTACGCCTCATTTaGGTCCGGTGTCTAGCAAACAAGTCACTGATCCTC +
Preference number: 6 (lower is better)
Translates to: LPCFAKRFLRLI*VRCLANKSLIL
Trigger: GAGGATCAGTGACTTGTTTGCTAGACACCGGACCAAAATGAGGCGTAAGAAACGCTTTGCAAAGCAAGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000605424.6
ENST00000611911.4
ENST00000613289.2
ENST00000615136.4
ENST00000619655.4
ENST00000631999.1
CDS GCA 72 bp GCTTCTTTAGGCCGTTGTTGTTACTTACATAGTCAATaGCGATCTCCCAGAACTTTGTCCTCAGGCTTTGAA +
Preference number: 6 (lower is better)
Translates to: ASLGRCCYLHSQ*RSPRTLSSGFE
Trigger: TTCAAAGCCTGAGGACAAAGTTCTGGGAGATCGGCATTGACTATGTAAGTAACAACAACGGCCTAAAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615317.4
CDS CAA 72 bp AAATCTTGGCCTAGCCGGATTTTAACAGTGCTCACCTaGCTTTGCAAAGCGTTTCTTACGCCTCATTTTGGT +
Preference number: 6 (lower is better)
Translates to: KSWPSRILTVLT*LCKAFLTPHFG
Trigger: ACCAAAATGAGGCGTAAGAAACGCTTTGCAAAGCAAGGTGAGCACTGTTAAAATCCGGCTAGGCCAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000612672.1
ENST00000616383.1
ENST00000632268.1
ENST00000632360.1