Pregenerated sensors for MMP27 (Homo sapiens)
Ensembl gene IDs: ENSG00000137675Ensembl transcript IDs: ENST00000260229.5
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTATCAGGCAGCTCAAAATaGCCATTGAATTTGGATATT | + |
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Preference number: 2 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLSGSSK*PLNLDI Trigger: AATATCCAAATTCAATGGCCATTTTGAGCTGCCTGA...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTACCAGGAGGAAAGGCATaGCCAAGCACTCCCAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLPGGKA*PSTPKG Trigger: TCCCTTGGGAGTGCTTGGCCATGCCTTTCCTCCTGG...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTTCAGGGTCACAGGCATaGGGTATAGTGGGTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCSGSQA*GIVGSF Trigger: AAAGGAACCCACTATACCCCATGCCTGTGACCCTGA...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTGAGAGTAGAACTGGTTaGGATATGCCTGAGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCESRTG*DMPEPV Trigger: AACTGGCTCAGGCATATCTCAACCAGTTCTACTCTC...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGTCATCCTCATCAAAATaGGTGTCACCACCCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKSSSSK*VSPPRP Trigger: GGGTCTGGGTGGTGACACTCATTTTGATGAGGATGA...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR GCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGATCCACAGCAGCTCGTaGCATATCCGGAGTATAGTT | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKIHSSS*HIRSIV Trigger: AACTATACTCCGGATATGGCACGAGCTGCTGTGGAT...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR GCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGTTCTCGTATGCAGCTTaGAGATCAGCTGGCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKFSYAA*RSAGRD Trigger: ATCTCTGCCAGCTGATCTGCAAGCTGCATACGAGAA...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR GCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGTGTTTTACCACTCTCTaGGGGAACCCTTTGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKCFTTL*GNPLSM Trigger: CATGGACAAAGGGTTCCCGCAGAGAGTGGTAAAACA...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTCCAGAATCTTATCTCTaGGGTTCTCGTATGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCPESYL*GSRMQL Trigger: AAGCTGCATACGAGAACCCCAGAGATAAGATTCTGG...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTTGGTTGAGATATGCCTaGGCCAGTTGCATATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCWLRYA*ASCIFS Trigger: AGAAAATATGCAACTGGCTCAGGCATATCTCAACCA...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAGATCTCAAGGGTGTTTaGGTCCAGTTTTCCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLDLKGV*VQFSSH Trigger: GTGACTGGAAAACTGGACTCAAACACCCTTGAGATC...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAACCTGGGTGTCTTCATaGTCTCAAGGGTGTTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLTWVSS*SQGCLS Trigger: ACTCAAACACCCTTGAGATCATGAAGACACCCAGGT...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTTGGACTGGATTCCATTaGTATCATCCTGAGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCWTGFH*YHPEKV Trigger: CACTTTCTCAGGATGATATCAATGGAATCCAGTCCA...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR GCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGACCTCCAGCACCAAATaGCCACAAAGAAGTAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKTSSTK*PQRSRF Trigger: AAACCTACTTCTTTGTGGGCATTTGGTGCTGGAGGT...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTCAGGGAGACATAATTTaGGAACATCAAGGCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCQGDII*EHQGCL Trigger: CAAACAGCCTTGATGTTCCCAAATTATGTCTCCCTG...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTATCATCCTGAGAAAGTaGGTATTTTCTGGGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCIILRK*VFSGIQ Trigger: CTGGATCCCAGAAAATACCCACTTTCTCAGGATGAT...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGTATAGTGGGTTCCTTTaGCTTAGCAGGTTCCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKYSGFL*LSRFLR Trigger: CCTAAGGAACCTGCTAAGCCAAAGGAACCCACTATA...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTCATCAACACGGATACTaGTTCCAGGAAAGTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCHQHGY*FQESVL Trigger: TAAAACACTTTCCTGGAATCAGTATCCGTGTTGATG...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGGCTTTGATCCACGGCTaGAAAAGAAGAATCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKALIHG*KRRILC Trigger: ACAAAGGATTCTTCTTTTTCAGCCGTGGATCAAAGC...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTCAAGTCCACAAAGCATaGAATAGGCTTAAAGTACAG | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCQVHKA*NRLKVQ Trigger: CTGTACTTTAAGCCTATTTCATGCTTTGTGGACTTG...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGCCTTTGTCCATGGTTTaGGTCATTTCATCAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKPLSMV*VISSNL Trigger: GAGGTTTGATGAAATGACCCAAACCATGGACAAAGG...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTTTATTATTCTGTAGGTaGGGTTGTATTTTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCLLFCR*GCIFST Trigger: GGTGGAGAAAATACAACCTCACCTACAGAATAATAA...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGCAAACTCAACATCCGTaGTATCATAATAGATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKQTQHP*YHNRSS Trigger: GGAGGATCTATTATGATATCACGGATGTTGAGTTTG...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGAGACAGCATATCCTCTaGTCATCCAGAAGTTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKRQHIL*SSRSFH Trigger: ATGAAAACTTCTGGATGATCAGAGGATATGCTGTCT...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTTATCTTTATGCCTCCTaGATGTGCTTTTTCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCYLYAS*MCFFLV Trigger: AACAAGGAAAAAGCACATTCAGGAGGCATAAAGATA...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR GCA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTACTTATCACAGACGGCTaGATCTATTTTCTTCACACG | + |
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Preference number: 4 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLLITDG*IYFLHT Trigger: CGTGTGAAGAAAATAGATGCAGCCGTCTGTGATAAG...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR GCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTATGTCGTATTCAAATTaGTTTGATCCACGGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCMSYSN*FDPRLK Trigger: TTTCAGCCGTGGATCAAAGCAATTTGAATACGACAT...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAACTTCTAAACCTTCTTaGATAGCCTCATCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLTSKPS*IASSTA Trigger: TGCTGTGGATGAGGCTATCCAAGAAGGTTTAGAAGT...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGAAAGTGGGTATTTTCTaGGATCCAGGGAGACATAAT | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKKVGIF*DPGRHN Trigger: ATTATGTCTCCCTGGATCCCAGAAAATACCCACTTT...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAGGATTTGGGATAATCTaGCAAGACAGCATATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLGFGII*QDSISS Trigger: AGAGGATATGCTGTCTTGCCAGATTATCCCAAATCC...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGATGTATGGATGGATTTaGGATAATCTGGCAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKMYGWI*DNLARQ Trigger: CTGTCTTGCCAGATTATCCCAAATCCATCCATACAT...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTAACCTAATGTATGGATaGATTTGGGATAATCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCNLMYG*IWDNLA Trigger: TGCCAGATTATCCCAAATCCATCCATACATTAGGTT...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAGTAGGTTTTTCTTGTaGTCTTATCACAGACGGCTG | + |
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Preference number: 4 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLSRFFL*SYHRRL Trigger: CAGCCGTCTGTGATAAGACCACAAGAAAAACCTACT...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CCA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTTCAGGCAGCTCAAAATaGCCATTGAATTTGGATATT | + |
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Preference number: 4 (lower is better) Translates to: QLKMAIEFGYLELGPATCSGSSK*PLNLDI Trigger: AATATCCAAATTCAATGGCCATTTTGAGCTGCCTGA...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR TCA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTACCATTGATATCATCCTaGGAAAGTGGGTATTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLPLISS*ESGYFL Trigger: CAGAAAATACCCACTTTCTCAGGATGATATCAATGG...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CCA 90 bp | AAAAGTCAAGTCAGGGTCACAGGCATGGGGTATAGTGGGTTCCTTTaGCTTAGCAGGTTCCTTAGGCAGACCTCCATAGATGGACTGGAT | + |
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Preference number: 5 (lower is better) Translates to: KSQVRVTGMGYSGFL*LSRFLRQTSIDGLD Trigger: ATCCAGTCCATCTATGGAGGTCTGCCTAAGGAACCTGCTAAGCCAAAGGAACCCACTATACCCCATGCCTGTGACCCTGACTTGACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CCA 90 bp | CGGAAAGTTGTGATAGCGTCAAAAGTCAAGTCAGGGTCACAGGCATaGGGTATAGTGGGTTCCTTTGGCTTAGCAGGTTCCTTAGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RKVVIASKVKSGSQA*GIVGSFGLAGSLGR Trigger: TCTGCCTAAGGAACCTGCTAAGCCAAAGGAACCCACTATACCCCATGCCTGTGACCCTGACTTGACTTTTGACGCTATCACAACTTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS TCA 90 bp | AAAAGAAGAATCCTTTGTACTGGAAAGCAGCATCAACACGGATACTaGTTCCAGGAAAGTGTTTTACCACTCTCTGCGGGAACCCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: KRRILCTGKQHQHGY*FQESVLPLSAGTLC Trigger: ACAAAGGGTTCCCGCAGAGAGTGGTAAAACACTTTCCTGGAATCAGTATCCGTGTTGATGCTGCTTTCCAGTACAAAGGATTCTTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGCTCTGCGGGAACCCTTaGTCCATGGTTTGGGTCATT | + |
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Preference number: 5 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKLCGNP*SMVWVI Trigger: AATGACCCAAACCATGGACAAAGGGTTCCCGCAGAG...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS GCA 90 bp | TCTTTAAAAACCAGAATCTTATCTCTGGGGTTCTCGTATGCAGCTTaGAGATCAGCTGGCAGAGATGGCCAGAATGAAGCAATTAATTCA | + |
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Preference number: 5 (lower is better) Translates to: SLKTRILSLGFSYAA*RSAGRDGQNEAINS Trigger: TGAATTAATTGCTTCATTCTGGCCATCTCTGCCAGCTGATCTGCAAGCTGCATACGAGAACCCCAGAGATAAGATTCTGGTTTTTAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CCA 90 bp | ACCTCCATAGATGGACTGGATTCCATTGATATCATCCTGAGAAAGTaGGTATTTTCTGGGATCCAGGGAGACATAATTTGGGAACATCAA | + |
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Preference number: 5 (lower is better) Translates to: TSIDGLDSIDIILRK*VFSGIQGDIIWEHQ Trigger: TTGATGTTCCCAAATTATGTCTCCCTGGATCCCAGAAAATACCCACTTTCTCAGGATGATATCAATGGAATCCAGTCCATCTATGGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTAATCCTGCTCCATCCTaGGTCCAGTTTTCATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: QLKMAIEFGYLELGPATCNPAPS*VQFSSS Trigger: TGAGGATGAAAACTGGACCAAGGATGGAGCAGGATT...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAGTTCTCGTATGCAGCTaGCAGATCAGCTGGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLVLVCS*QISWQR Trigger: TCTCTGCCAGCTGATCTGCAAGCTGCATACGAGAAC...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGGCCACAAGAAACAAGTaGAATCCTGCTCCATCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKATRNK*NPAPSL Trigger: CAAGGATGGAGCAGGATTCAACTTGTTTCTTGTGGC...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGCCAGGGAGACATAATTaGGGAACATCAAGGCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKPGRHN*GTSRLF Trigger: AAACAGCCTTGATGTTCCCAAATTATGTCTCCCTGG...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGTTTAGTGGAGTGACTTaGCTCCACACTTCTAAACCT | + |
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Preference number: 5 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKFSGVT*LHTSKP Trigger: AGGTTTAGAAGTGTGGAGCAAAGTCACTCCACTAAA...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTATCCCCTTTGAAATCTaGGTGAATTTTAGTGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: QLKMAIEFGYLELGPATCIPFEI*VNFSGV Trigger: CACTCCACTAAAATTCACCAAGATTTCAAAGGGGAT...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAGAACATCAAGGCTGTTaGATCATTGGAGTGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLEHQGC*IIGVRE Trigger: CTCTCTCACTCCAATGATCAAACAGCCTTGATGTTC...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTCAAATGAGGAGTTCTTaGGTTCTTTGCATTGAAACC | + |
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Preference number: 5 (lower is better) Translates to: QLKMAIEFGYLELGPATCQMRSS*VLCIET Trigger: GGTTTCAATGCAAAGAACCAAAGAACTCCTCATTTG...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAGAAGTAGGTTTTTCTaGTGGTCTTATCACAGACGG | + |
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Preference number: 5 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLRSRFF*WSYHRR Trigger: CCGTCTGTGATAAGACCACAAGAAAAACCTACTTCT...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | CAGCTCAAAATGGCCATTGAATTTGGATATTTAGAACTAGGACCAGCAACTTGTAAAAAGAAGAATCCTTaGTACTGGAAAGCAGCATCA | + |
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Preference number: 5 (lower is better) Translates to: QLKMAIEFGYLELGPATCKKKNP*YWKAAS Trigger: TGATGCTGCTTTCCAGTACAAAGGATTCTTCTTTTT...ACAAGTTGCTGGTCCTAGTTCTAAATATCCAAATTCAATGGCCATTTTGAGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | TCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAAAGATATGCCTGAGCCAGTaGCATATTTTCTTCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: SVIRHVFSKSTKHEIGLKICLSQ*HIFFIF Trigger: GAAAATGAAGAAAATATGCAACTGGCTCAGGCATAT...CTTTAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTAACTCCTATTCTTGCTTaGAACAAGATGATTCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLTPILA*NKMIPF Trigger: GAAGGGAATCATCTTGTTCAAAGCAAGAATAGGAGT...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS-3UTR CAA 90 bp | TATTCAGTTATAAGACATGTCTTCTCCAAGTCCACAAAGCATGAAATAGGCTTATGCATTTCCCGAATTTaGTCATCTATGAGACTCCTA | + |
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Preference number: 5 (lower is better) Translates to: YSVIRHVFSKSTKHEIGLCISRI*SSMRLL Trigger: TAGGAGTCTCATAGATGACAAAATTCGGGAAATGCA...TAAGCCTATTTCATGCTTTGTGGACTTGGAGAAGACATGTCTTATAACTGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS GCA 90 bp | CTCATGATTCGGGTAATATTCTTTGTCTTAATGTCGTATTCAAATTaGTTTGATCCACGGCTGAAAAAGAAGAATCCTTTGTACTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LMIRVIFFVLMSYSN*FDPRLKKKNPLYWK Trigger: TTTCCAGTACAAAGGATTCTTCTTTTTCAGCCGTGGATCAAAGCAATTTGAATACGACATTAAGACAAAGAATATTACCCGAATCATGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CCA 72 bp | GTCAGGGTCACAGGCATGGGGTATAGTGGGTTCCTTTaGCTTAGCAGGTTCCTTAGGCAGACCTCCATAGAT | + |
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Preference number: 6 (lower is better) Translates to: VRVTGMGYSGFL*LSRFLRQTSID Trigger: ATCTATGGAGGTCTGCCTAAGGAACCTGCTAAGCCAAAGGAACCCACTATACCCCATGCCTGTGACCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CCA 72 bp | GTGATAGCGTCAAAAGTCAAGTCAGGGTCACAGGCATaGGGTATAGTGGGTTCCTTTGGCTTAGCAGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: VIASKVKSGSQA*GIVGSFGLAGS Trigger: GGAACCTGCTAAGCCAAAGGAACCCACTATACCCCATGCCTGTGACCCTGACTTGACTTTTGACGCTATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CAA 72 bp | ATCCAGGGAGACATAATTTGGGAACATCAAGGCTGTTaGATCATTGGAGTGAGAGAGCCCCAGTGCATGACC | + |
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Preference number: 6 (lower is better) Translates to: IQGDIIWEHQGC*IIGVREPQCMT Trigger: GGTCATGCACTGGGGCTCTCTCACTCCAATGATCAAACAGCCTTGATGTTCCCAAATTATGTCTCCCTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CAA 90 bp | ATACTGATTCCAGGAAAGTGTTTTACCACTCTCTGCGGGAACCCTTaGTCCATGGTTTGGGTCATTTCATCAAACCTCCAGCACCAAATG | + |
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Preference number: 6 (lower is better) Translates to: ILIPGKCFTTLCGNP*SMVWVISSNLQHQM Trigger: CATTTGGTGCTGGAGGTTTGATGAAATGACCCAAACCATGGACAAAGGGTTCCCGCAGAGAGTGGTAAAACACTTTCCTGGAATCAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS TCA 72 bp | ATCCTTTGTACTGGAAAGCAGCATCAACACGGATACTaGTTCCAGGAAAGTGTTTTACCACTCTCTGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: ILCTGKQHQHGY*FQESVLPLSAG Trigger: TCCCGCAGAGAGTGGTAAAACACTTTCCTGGAATCAGTATCCGTGTTGATGCTGCTTTCCAGTACAAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS GCA 72 bp | TTTAAAAACCAGAATCTTATCTCTGGGGTTCTCGTATaGAGCTTGCAGATCAGCTGGCAGAGATGGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: FKNQNLISGVLV*SLQISWQRWPE Trigger: TTCTGGCCATCTCTGCCAGCTGATCTGCAAGCTGCATACGAGAACCCCAGAGATAAGATTCTGGTTTTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CAA 90 bp | TCTGCAATCCCCTTTGAAATCTTGGTGAATTTTAGTGGAGTGACTTaGCTCCACACTTCTAAACCTTCTTGGATAGCCTCATCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SAIPFEILVNFSGVT*LHTSKPSWIASSTA Trigger: TGCTGTGGATGAGGCTATCCAAGAAGGTTTAGAAGTGTGGAGCAAAGTCACTCCACTAAAATTCACCAAGATTTCAAAGGGGATTGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CCA 72 bp | GATGGACTGGATTCCATTGATATCATCCTGAGAAAGTaGGTATTTTCTGGGATCCAGGGAGACATAATTTGG | + |
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Preference number: 6 (lower is better) Translates to: DGLDSIDIILRK*VFSGIQGDIIW Trigger: CCAAATTATGTCTCCCTGGATCCCAGAAAATACCCACTTTCTCAGGATGATATCAATGGAATCCAGTCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CAA 72 bp | AAAGTGGGTATTTTCTGGGATCCAGGGAGACATAATTaGGGAACATCAAGGCTGTTTGATCATTGGAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: KVGIFWDPGRHN*GTSRLFDHWSE Trigger: CTCACTCCAATGATCAAACAGCCTTGATGTTCCCAAATTATGTCTCCCTGGATCCCAGAAAATACCCACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CCA 72 bp | TTTTCTTCACACGTCCTGGAAAACCTAATGTATGGATaGATTTGGGATAATCTGGCAAGACAGCATATCCTC | + |
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Preference number: 6 (lower is better) Translates to: FSSHVLENLMYG*IWDNLARQHIL Trigger: GAGGATATGCTGTCTTGCCAGATTATCCCAAATCCATCCATACATTAGGTTTTCCAGGACGTGTGAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS GCA 72 bp | CGGGTAATATTCTTTGTCTTAATGTCGTATTCAAATTaGTTTGATCCACGGCTGAAAAAGAAGAATCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RVIFFVLMSYSN*FDPRLKKKNPL Trigger: CAAAGGATTCTTCTTTTTCAGCCGTGGATCAAAGCAATTTGAATACGACATTAAGACAAAGAATATTACCCG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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| CDS CAA 72 bp | TACAATATCTTTATGCCTCCTGAATGTGCTTTTTCCTaGTTGATATCAAAACCAAATGAGGAGTTCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: YNIFMPPECAFS*LISKPNEEFFG Trigger: ACCAAAGAACTCCTCATTTGGTTTTGATATCAACAAGGAAAAAGCACATTCAGGAGGCATAAAGATATTGTA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000260229.5 |
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