RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMP25 (Homo sapiens)

Ensembl gene IDs: ENSG00000008516

Ensembl transcript IDs: ENST00000336577.9, ENST00000570755.1, ENST00000575441.1, ENST00000612971.2

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATaGTCCCAGCGCGCGTGCGCCCCTGAAGGCGGGTTCCGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: PGGSREGTTGATTDA*SQRACAPEGGFRWQ
Trigger: CTGCCACCGGAACCCGCCTTCAGGGGCGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CCA 90 bp GCGCCAGTACTGCCGGCCGCGGACCAGGTAGGTCTTCCCGTTCTGTaGCCACGAGAACACGGCGTCCACCTCCTCTCCCGGGGGCAGCCC +
Preference number: 1 (lower is better)
Translates to: APVLPAADQVGLPVL*PREHGVHLLSRGQP
Trigger: GGGCTGCCCCCGGGAGAGGAGGTGGACGCCGTGTTCTCGTGGCCACAGAACGGGAAGACCTACCTGGTCCGCGGCCGGCAGTACTGGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR CCA 90 bp CGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCAGACGCAGTaGCCAGGCGGGGCGGGGCTGCGGAGAGTCCCAGGACTGCGCTCC +
Preference number: 1 (lower is better)
Translates to: RSQACPLTTQECQTQ*PGGAGLRRVPGLRS
Trigger: GGAGCGCAGTCCTGGGACTCTCCGCAGCCCCGCCCCGCCTGGCCACTGCGTCTGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR TCA 90 bp CCACTGATTCCACCACCCAGGACGTGGCGCATGGGTCCTCAGGGGTaGTATCTGGGCTGGTTCCGGGTCTGGGTCCCAGGTCCCCACCAG +
Preference number: 1 (lower is better)
Translates to: PLIPPPRTWRMGPQG*YLGWFRVWVPGPHQ
Trigger: CTGGTGGGGACCTGGGACCCAGACCCGGAACCAGCCCAGATATCACCCCTGAGGACCCATGCGCCACGTCCTGGGTGGTGGAATCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CCA 90 bp TTCCACCACCCAGGACGTGGCGCATGGGTCCTCAGGGGTGATATCTaGGCTGGTTCCGGGTCTGGGTCCCAGGTCCCCACCAGTGTGGCA +
Preference number: 1 (lower is better)
Translates to: FHHPGRGAWVLRGDI*AGSGSGSQVPTSVA
Trigger: TGCCACACTGGTGGGGACCTGGGACCCAGACCCGGAACCAGCCCAGATATCACCCCTGAGGACCCATGCGCCACGTCCTGGGTGGTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR TCA 90 bp AGAGGAGCAGCGGGATGGGAGCAGGCCAACGTCCTGCGGCCTGGTTaGGCTCGCACTGACAATCGCAGGTTTCGGACACGGGGGTCGCTT +
Preference number: 1 (lower is better)
Translates to: RGAAGWEQANVLRPG*ARTDNRRFRTRGSL
Trigger: AAGCGACCCCCGTGTCCGAAACCTGCGATTGTCAGTGCGAGCTCAACCAGGCCGCAGGACGTTGGCCTGCTCCCATCCCGCTGCTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR GCA 90 bp CAGCAGGGGCAAGAGGAGCAGCGGGATGGGAGCAGGCCAACGTCCTaGGGCCTGGTTGAGCTCGCACTGACAATCGCAGGTTTCGGACAC +
Preference number: 1 (lower is better)
Translates to: QQGQEEQRDGSRPTS*GLVELALTIAGFGH
Trigger: GTGTCCGAAACCTGCGATTGTCAGTGCGAGCTCAACCAGGCCGCAGGACGTTGGCCTGCTCCCATCCCGCTGCTCCTCTTGCCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR CCA 90 bp AGGAGGAGGTGGGTGGCGGGGGAGCAACGGAAAAGGTTAACAGCCTaGAGAGCAAGGGTCGTCCCTCCAGCCACTGATTCCACCACCCAG +
Preference number: 1 (lower is better)
Translates to: RRRWVAGEQRKRLTA*RARVVPPATDSTTQ
Trigger: CTGGGTGGTGGAATCAGTGGCTGGAGGGACGACCCTTGCTCTCCAGGCTGTTAACCTTTTCCGTTGCTCCCCCGCCACCCACCTCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR TCA 90 bp GAAAAGGTTAACAGCCTGGAGAGCAAGGGTCGTCCCTCCAGCCACTaGTTCCACCACCCAGGACGTGGCGCATGGGTCCTCAGGGGTGAT +
Preference number: 1 (lower is better)
Translates to: EKVNSLESKGRPSSH*FHHPGRGAWVLRGD
Trigger: ATCACCCCTGAGGACCCATGCGCCACGTCCTGGGTGGTGGAATCAGTGGCTGGAGGGACGACCCTTGCTCTCCAGGCTGTTAACCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CCA 90 bp TGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGGTaGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGC +
Preference number: 1 (lower is better)
Translates to: WGSGHRCGLNILVLG*RNTAEPQKCHETAS
Trigger: GCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCCACCCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR TCA 90 bp TTTCTAATATACAAATTTCCCCCTCCTCATACATGGAAAAGAAACTaGCAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCAGGT +
Preference number: 1 (lower is better)
Translates to: FLIYKFPPPHTWKRN*QRPKSFPGSPEFPG
Trigger: ACCTGGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGAGGGGGAAATTTGTATATTAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACTGGTCCCAGCGCGCGTaGGCCCCTGAAGGCGGGTTC +
Preference number: 2 (lower is better)
Translates to: VRPPPGGSREGTTGATTDWSQRA*APEGGF
Trigger: GAACCCGCCTTCAGGGGCGCACGCGCGCTGGGACCA...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR TCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCCATCGGTGTGGCCTaGACATATTGGTCCTGGGGT +
Preference number: 2 (lower is better)
Translates to: VRPPPGGSREGTTGATTDAIGVA*TYWSWG
Trigger: ACCCCAGGACCAATATGTTCAGGCCACACCGATGGC...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp CAGCAGGGGCAAGAGGAGCAGCGGGATGGGAGCAGGCCAACGTCCTGCGGCCTGGAAGCGGTGCAGCCGTaGGGGTCGCGGGGACACCAG +
Preference number: 2 (lower is better)
Translates to: QQGQEEQRDGSRPTSCGLEAVQP*GSRGHQ
Trigger: CTGGTGTCCCCGCGACCCGCACGGCTGCACCGCTTC...CAGGCCGCAGGACGTTGGCCTGCTCCCATCCCGCTGCTCCTCTTGCCCCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CCA 90 bp GCAACTGGGGCAACCCCTCGCATGGTTGCTGGGACAGCCGCCCACAGCCTCAGCGCGACGACCGACGCATaGTCCCAGCGCGCGTGCGCC +
Preference number: 2 (lower is better)
Translates to: ATGATPRMVAGTAAHSLSATTDA*SQRACA
Trigger: GGCGCACGCGCGCTGGGACCATGCGTCGGTCGTCGC...GCTGAGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGGGGTGGAGGAACACTaGAGAGCCACAGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: VRPPPGGSREGTTGATTDGVEEH*RATEMP
Trigger: TGGCATTTCTGTGGCTCTGCAGTGTTCCTCCACCCC...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR TCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACCCACCAGCGTTGAGTTaGTGGGAGTCAAGCTGTTCT +
Preference number: 2 (lower is better)
Translates to: VRPPPGGSREGTTGATTDPPALS*WESSCS
Trigger: AGAACAGCTTGACTCCCATCAACTCAACGCTGGTGG...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR TCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGAGTAGTGGGCGCCCTTaGAGAAGTAGGTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: AGRERRGRRPTHGPSARASSGRP*RSRCHL
Trigger: CAGGTGACACCTACTTCTTCAAGGGCGCCCACTACT...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR GCA 90 bp ACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGCTGTTCTCTCCAGGGTaGAAGCAGGGAAGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: TAPWRQPGGNDGGDDRRMLFSPG*KQGRGS
Trigger: AGAACCCCTTCCCTGCTTGCACCCTGGAGAGAACAG...CATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp ACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGAAGTAGGTGTCACCTaGGTTGCTGACGGTGACATC +
Preference number: 2 (lower is better)
Translates to: TAPWRQPGGNDGGDDRRMEVGVT*VADGDI
Trigger: GATGTCACCGTCAGCAACGCAGGTGACACCTACTTC...CATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CCA 90 bp GGGGCGCCTTCCCATAGAGTTGCTGCAGGCCATCGCGGTCATCCTGAGACAGGCCGGGGGACTCGGCCGTaGAGGGCGCTGTTCGGTCTG +
Preference number: 2 (lower is better)
Translates to: GAPSHRVAAGHRGHPETGRGTRP*RALFGL
Trigger: CAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCG...GCCTGTCTCAGGATGACCGCGATGGCCTGCAGCAACTCTATGGGAAGGCGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACAAAAGGTTAACAGCCTaGAGAGCAAGGGTCGTCCCT +
Preference number: 2 (lower is better)
Translates to: VRPPPGGSREGTTGATTDKRLTA*RARVVP
Trigger: AGGGACGACCCTTGCTCTCCAGGCTGTTAACCTTTT...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR TCA 90 bp CAGCAGGGGCAAGAGGAGCAGCGGGATGGGAGCAGGCCAACGTCCTGCGGCCTGATGGGTCCTCAGGGGTaGTATCTGGGCTGGTTCCGG +
Preference number: 2 (lower is better)
Translates to: QQGQEEQRDGSRPTSCGLMGPQG*YLGWFR
Trigger: CCGGAACCAGCCCAGATATCACCCCTGAGGACCCAT...CAGGCCGCAGGACGTTGGCCTGCTCCCATCCCGCTGCTCCTCTTGCCCCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR TCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGAGTGAGGATTCAGGGTaGGTGTGGGATCTGCAAACT +
Preference number: 2 (lower is better)
Translates to: AGRERRGRRPTHGPSARASEDSG*VWDLQT
Trigger: AGTTTGCAGATCCCACACTCACCCTGAATCCTCACT...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp GTCCGGCTCGGTCTTGATGCTGTTCTTGGGGAAGCGCCAGTAGTGGGCGCCCTTGCCCCGCCCTCCAGCTaGCGGTCCTGGAACACCCAG +
Preference number: 2 (lower is better)
Translates to: VRLGLDAVLGEAPVVGALAPPSS*RSWNTQ
Trigger: CTGGGTGTTCCAGGACCGGCAGCTGGAGGGCGGGGC...AAGGGCGCCCACTACTGGCGCTTCCCCAAGAACAGCATCAAGACCGAGCCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGTTTCCCCTCGGATGTTaGCGATGGCGTCAAAATTGC +
Preference number: 2 (lower is better)
Translates to: AGRERRGRRPTHGPSARAFPLGC*RWRQNC
Trigger: GCAATTTTGACGCCATCGCCAACATCCGAGGGGAAA...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR TCA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGGCGCGCGTGCGCCCCTaGAGGCGGGTTCCGGTGGCA +
Preference number: 2 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGARVRP*RRVPVA
Trigger: TGCCACCGGAACCCGCCTTCAGGGGCGCACGCGCGC...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR TCA 90 bp CTTCCCATAGAGTTGCTGCAGGCCATCGCGGTCATCCTGAGACAGGCGGTACTTGCGCGCGTGCGCCCCTaGAGGCGGGTTCCGGTGGCA +
Preference number: 2 (lower is better)
Translates to: LPIELLQAIAVILRQAVLARVRP*RRVPVA
Trigger: TGCCACCGGAACCCGCCTTCAGGGGCGCACGCGCGC...AAGTACCGCCTGTCTCAGGATGACCGCGATGGCCTGCAGCAACTCTATGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR TCA 90 bp CCCAGGTTCCACCCACCCCTCACTCTAGAGCTAAGGCCTCCCAGGAGGGAGTGCGGCAATGACCAGGCCTaGGCCAGGGTTCGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: PRFHPPLTLELRPPRRECGNDQA*ARVRSL
Trigger: CAGGGACCGAACCCTGGCTCAGGCCTGGTCATTGCC...GCACTCCCTCCTGGGAGGCCTTAGCTCTAGAGTGAGGGGTGGGTGGAACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCCGGGGGACTCGGCCGTaGAGGGCGCTGTTCGGTCTG +
Preference number: 2 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVARGTRP*RALFGL
Trigger: CAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCG...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCGCGACGACCGACGCATaGTCCCAGCGCGCGTGCGCC +
Preference number: 2 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGATTDA*SQRACA
Trigger: GGCGCACGCGCGCTGGGACCATGCGTCGGTCGTCGC...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCGAATGCCAGACGCAGTaGCCAGGCGGGGCGGGGCTG +
Preference number: 2 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVAECQTQ*PGGAGL
Trigger: CAGCCCCGCCCCGCCTGGCCACTGCGTCTGGCATTC...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GTCCGGCTCGGTCTTGATGCTGTTCTTGGGGAAGCGCCAGTAGTGGGCGCCCTTAGCTGTCCGGAGGGCTaGAGGCGCCAGAACCAGGGG +
Preference number: 2 (lower is better)
Translates to: VRLGLDAVLGEAPVVGALSCPEG*RRQNQG
Trigger: CCCCTGGTTCTGGCGCCTCCAGCCCTCCGGACAGCT...AAGGGCGCCCACTACTGGCGCTTCCCCAAGAACAGCATCAAGACCGAGCCGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR GCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCCTGGGCCCAGGGAGGTaGCCAAGTTGGGTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVALGPGR*PSWVAW
Trigger: CCAGGCCACCCAACTTGGGCACCTCCCTGGGCCCAG...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGGTGAGTGTGGGATCTaGAAACTTAAATTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: VRPPPGGSREGTTGATTDGECGI*KLKFPS
Trigger: ACTGGGAAATTTAAGTTTGCAGATCCCACACTCACC...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GTGGGTGGCGGGGGAGCAACGGAAAAGGTTAACAGCCTGGAGAGCAAGGGTCGTCCGAGCCCCCGTCCGTaGGAACAGACAAGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: VGGGGATEKVNSLESKGRPSPRP*EQTRGL
Trigger: GAGGCCCCTTGTCTGTTCCCACGGACGGGGGCTCGG...ACGACCCTTGCTCTCCAGGCTGTTAACCTTTTCCGTTGCTCCCCCGCCACCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCCCAGGGGTTTCCTTGTaGGCTTGTCATATGGGGTTT +
Preference number: 2 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGPGVSL*ACHMGF
Trigger: AAACCCCATATGACAAGCCCACAAGGAAACCCCTGG...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR GCA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCCCAGCACCCGGCCTTaGTCCCAGCCTCTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: RGKAQLRSQACPLTTQECPSTRP*SQPLPS
Trigger: AGAGGGAAGAGGCTGGGAGCAAGGCCGGGTGCTGGG...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CCA 90 bp AGGCCTGAGCCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTGATGGGACCGAGCCCCCGTCCGTaGGAACAGACAAGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: RPEPGFGPCLSTSVELMGPSPRP*EQTRGL
Trigger: GAGGCCCCTTGTCTGTTCCCACGGACGGGGGCTCGG...TCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGGCTCAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp CCCAGGTTCCACCCACCCCTCACTCTAGAGCTAAGGCCTCCCAGGAGGGAGTGCCCAGGACGTGGCGCATaGGTCCTCAGGGGTGATATC +
Preference number: 2 (lower is better)
Translates to: PRFHPPLTLELRPPRRECPGRGA*VLRGDI
Trigger: GATATCACCCCTGAGGACCCATGCGCCACGTCCTGG...GCACTCCCTCCTGGGAGGCCTTAGCTCTAGAGTGAGGGGTGGGTGGAACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp CGTTCTGTGGCCACGAGAACACGGCGTCCACCTCCTCTCCCGGGGGCAGCCCCACTCGGATGTTGGCGATaGCGTCAAAATTGCCCTCAC +
Preference number: 2 (lower is better)
Translates to: RSVATRTRRPPPLPGAAPLGCWR*RQNCPH
Trigger: GTGAGGGCAATTTTGACGCCATCGCCAACATCCGAG...TGGGGCTGCCCCCGGGAGAGGAGGTGGACGCCGTGTTCTCGTGGCCACAGAACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR TCA 90 bp GGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGCTACTGCCCCCGGAGTGGGGACAGGGTaGACGAGGTGCCCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: GGTLQSHRNATKQPATAPGVGTG*TRCPQV
Trigger: AACCTGGGGGCACCTCGTTCACCCTGTCCCCACTCC...GGGGGCAGTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR TCA 90 bp CCCAGGTTCCACCCACCCCTCACTCTAGAGCTAAGGCCTCCCAGGAGGGAGTGCCCATCGCGGTCATCCTaGGACAGGCGGTACTTGTCA +
Preference number: 2 (lower is better)
Translates to: PRFHPPLTLELRPPRRECPSRSS*DRRYLS
Trigger: TGACAAGTACCGCCTGTCTCAGGATGACCGCGATGG...GCACTCCCTCCTGGGAGGCCTTAGCTCTAGAGTGAGGGGTGGGTGGAACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CCA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGGAAGGCGGGTTCCGGTaGCAGCGCCGGGGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGEGGFR*QRRGLR
Trigger: TCTGAGACCCCGGCGCTGCCACCGGAACCCGCCTTC...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GTCCGGCTCGGTCTTGATGCTGTTCTTGGGGAAGCGCCAGTAGTGGGCGCCCTTCTCAGGGGTGATATCTaGGCTGGTTCCGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: VRLGLDAVLGEAPVVGALLRGDI*AGSGSG
Trigger: CCCAGACCCGGAACCAGCCCAGATATCACCCCTGAG...AAGGGCGCCCACTACTGGCGCTTCCCCAAGAACAGCATCAAGACCGAGCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTCCAGCTGCCGGTCCTaGAACACCCAGAACTGGGGC +
Preference number: 2 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVASSCRS*NTQNWG
Trigger: GCCCCAGTTCTGGGTGTTCCAGGACCGGCAGCTGGA...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR TCA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCCGTCCCTCCAGCCACTaGTTCCACCACCCAGGACGT +
Preference number: 2 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGRPSSH*FHHPGR
Trigger: ACGTCCTGGGTGGTGGAATCAGTGGCTGGAGGGACG...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp AGGCCTGAGCCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTGATGGGAAACCCCTCGCATGGTTaGTGGGACAGCCGCCCACAG +
Preference number: 2 (lower is better)
Translates to: RPEPGFGPCLSTSVELMGNPSHG*WDSRPQ
Trigger: CTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTT...TCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGGCTCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCCTCAGGGGTGATATCTaGGCTGGTTCCGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVALRGDI*AGSGSG
Trigger: CCCAGACCCGGAACCAGCCCAGATATCACCCCTGAG...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GTCCGGCTCGGTCTTGATGCTGTTCTTGGGGAAGCGCCAGTAGTGGGCGCCCTTTGGAACACCCAGAACTaGGGCCCGCTAAAGAGGAGG +
Preference number: 2 (lower is better)
Translates to: VRLGLDAVLGEAPVVGALWNTQN*GPLKRR
Trigger: CCTCCTCTTTAGCGGGCCCCAGTTCTGGGTGTTCCA...AAGGGCGCCCACTACTGGCGCTTCCCCAAGAACAGCATCAAGACCGAGCCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR TCA 90 bp GTCCGGCTCGGTCTTGATGCTGTTCTTGGGGAAGCGCCAGTAGTGGGCGCCCTTAGAAGGGTTCCCCATTaGATGGAAGGCAGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: VRLGLDAVLGEAPVVGALRRVPH*MEGSSG
Trigger: CCCAGAACTGCCTTCCATTCAATGGGGAACCCTTCT...AAGGGCGCCCACTACTGGCGCTTCCCCAAGAACAGCATCAAGACCGAGCCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR TCA 90 bp AGGCCTGAGCCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTGATGGGAGCCATCGGTGTGGCCTaGACATATTGGTCCTGGGGT +
Preference number: 2 (lower is better)
Translates to: RPEPGFGPCLSTSVELMGAIGVA*TYWSWG
Trigger: ACCCCAGGACCAATATGTTCAGGCCACACCGATGGC...TCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGGCTCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCGGGTTCCCCATTGAATaGAAGGCAGTTCTGGGCCCA +
Preference number: 2 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVAGFPIE*KAVLGP
Trigger: TGGGCCCAGAACTGCCTTCCATTCAATGGGGAACCC...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp AGGCCTGAGCCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTGATGGGAGGGGTGGAGGAACACTaGAGAGCCACAGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: RPEPGFGPCLSTSVELMGGVEEH*RATEMP
Trigger: TGGCATTTCTGTGGCTCTGCAGTGTTCCTCCACCCC...TCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGGCTCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp TCCTCATACATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCGGCTGGTTCCGGGTCTaGGTCCCAGGTCCCCACCAG +
Preference number: 2 (lower is better)
Translates to: SSYMEKKLTEAQIVSWQPGWFRV*VPGPHQ
Trigger: CTGGTGGGGACCTGGGACCCAGACCCGGAACCAGCC...GGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCGGGTTCCCCATTGAATaGAAGGCAGTTCTGGGCCCA +
Preference number: 2 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGGFPIE*KAVLGP
Trigger: TGGGCCCAGAACTGCCTTCCATTCAATGGGGAACCC...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCGGGCAACCCCTCGCATaGTTGCTGGGACAGCCGCCC +
Preference number: 2 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPGQPLA*LLGQPP
Trigger: GGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCC...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR TCA 90 bp CATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCGGCAATGACCAGGCCTaGGCCAGGGTTCGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: HGKETDRGPNRFLAAQNSGNDQA*ARVRSL
Trigger: CAGGGACCGAACCCTGGCTCAGGCCTGGTCATTGCC...GGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCGCAGAGCCACAGAAATaGCACGAAACAGCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGAEPQK*HETASY
Trigger: GTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGC...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp GGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGCTACTGCCCCCGCAGAGCCACAGAAATaGCACGAAACAGCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: GGTLQSHRNATKQPATAPAEPQK*HETASY
Trigger: GTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGC...GGGGGCAGTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGTGTGGGCTTGTCATATaGGGTTTGGGGCGCCTTCCC +
Preference number: 2 (lower is better)
Translates to: DGVKIALTSIRDGEGWAVCGLVI*GLGRLP
Trigger: GGGAAGGCGCCCCAAACCCCATATGACAAGCCCACA...CACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR TCA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCTCTTTCCACCAGCGTTaGGTTGATGGGAGTCAAGCT +
Preference number: 2 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGSFHQR*VDGSQA
Trigger: AGCTTGACTCCCATCAACTCAACGCTGGTGGAAAGA...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGGAATGCCAGACGCAGTaGCCAGGCGGGGCGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GFRVSVGSANLNFPVILMECQTQ*PGGAGL
Trigger: CAGCCCCGCCCCGCCTGGCCACTGCGTCTGGCATTC...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCGAAACAGCCAGCTACTaGCCCCCACAATCCCCGCGA +
Preference number: 2 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPETASY*PPQSPR
Trigger: TCGCGGGGATTGTGGGGGGCAGTAGCTGGCTGTTTC...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CAA 90 bp GTAACTGACCAAAGTCTCCTGCCTTCTGTCCTCATGCTGATCTGTTaGTATGAGCAACTGGGGCAACCCCTCGCATGGTTGCTGGGACAG +
Preference number: 2 (lower is better)
Translates to: VTDQSLLPSVLMLIC*YEQLGQPLAWLLGQ
Trigger: CTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGCTCATACAAACAGATCAGCATGAGGACAGAAGGCAGGAGACTTTGGTCAGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR TCA 90 bp CATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCTTCCTGACCCCACCCTaGGTGAGGATTCAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: HGKETDRGPNRFLAAQNSFLTPP*VRIQGE
Trigger: CTCACCCTGAATCCTCACTCAGGGTGGGGTCAGGAA...GGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR TCA 90 bp GTGGGTGGCGGGGGAGCAACGGAAAAGGTTAACAGCCTGGAGAGCAAGGGTCGTACATGGAAAAGAAACTaGCAGAGGCCCAAATCGTTT +
Preference number: 2 (lower is better)
Translates to: VGGGGATEKVNSLESKGRTWKRN*QRPKSF
Trigger: AAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGT...ACGACCCTTGCTCTCCAGGCTGTTAACCTTTTCCGTTGCTCCCCCGCCACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR GCA 90 bp TCCTCATACATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCTCAGGCGCTCAGGACTaGCAGGACCCAGAGGATTCA +
Preference number: 2 (lower is better)
Translates to: SSYMEKKLTEAQIVSWQPSGAQD*QDPEDS
Trigger: TGAATCCTCTGGGTCCTGGCAGTCCTGAGCGCCTGA...GGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGCCCTCGCATGGTTGCTaGGACAGCCGCCCACAGCCT +
Preference number: 2 (lower is better)
Translates to: GFRVSVGSANLNFPVILMPSHGC*DSRPQP
Trigger: AGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGG...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTCTAGAAGAAGGCTGGTTCCGGGTCTaGGTCCCAGGTCCCCACCAG +
Preference number: 2 (lower is better)
Translates to: GSANLNFPVILMWDSLEEGWFRV*VPGPHQ
Trigger: CTGGTGGGGACCTGGGACCCAGACCCGGAACCAGCC...TTCTTCTAGACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCAAAAGGTTAACAGCCTaGAGAGCAAGGGTCGTCCCT +
Preference number: 2 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPKRLTA*RARVVP
Trigger: AGGGACGACCCTTGCTCTCCAGGCTGTTAACCTTTT...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGAAAGCTGGCTCTTCCTaGAAAAGGAAGGTCCTGCGG +
Preference number: 2 (lower is better)
Translates to: GFRVSVGSANLNFPVILMKAGSS*KRKVLR
Trigger: CCGCAGGACCTTCCTTTTCCAGGAAGAGCCAGCTTT...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CCA 90 bp GTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTAAAGCTGGCTCTTCCTaGAAAAGGAAGGTCCTGCGG +
Preference number: 2 (lower is better)
Translates to: VSVGSANLNFPVILMWDSKAGSS*KRKVLR
Trigger: CCGCAGGACCTTCCTTTTCCAGGAAGAGCCAGCTTT...ACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR GCA 72 bp ACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTaGGCCCCTGAAGGCGGGTTCCGGTGGCAGCGCCGG +
Preference number: 3 (lower is better)
Translates to: TGATTDAWSQRA*APEGGFRWQRR
Trigger: CCGGCGCTGCCACCGGAACCCGCCTTCAGGGGCGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CCA 72 bp AGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATaGTCCCAGCGCGCGTGCGCCCCTGAAGGCGGGTTC +
Preference number: 3 (lower is better)
Translates to: SREGTTGATTDA*SQRACAPEGGF
Trigger: GAACCCGCCTTCAGGGGCGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR GCA 72 bp CTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATaGCAGACGCAGTGGCCAGGCGGGGCGGGGCTGCGG +
Preference number: 3 (lower is better)
Translates to: LRSQACPLTTQE*QTQWPGGAGLR
Trigger: CCGCAGCCCCGCCCCGCCTGGCCACTGCGTCTGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CCA 72 bp CTGCCGGCCGCGGACCAGGTAGGTCTTCCCGTTCTGTaGCCACGAGAACACGGCGTCCACCTCCTCTCCCGG +
Preference number: 3 (lower is better)
Translates to: LPAADQVGLPVL*PREHGVHLLSR
Trigger: CCGGGAGAGGAGGTGGACGCCGTGTTCTCGTGGCCACAGAACGGGAAGACCTACCTGGTCCGCGGCCGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CAA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACCAGAACCAGGGGCCTTaGAAGAAGAAAGTTTCCCCT +
Preference number: 3 (lower is better)
Translates to: VRPPPGGSREGTTGATTDQNQGP*KKKVSP
Trigger: AGGGGAAACTTTCTTCTTCAAAGGCCCCTGGTTCTG...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR CCA 72 bp CCAGGACGTGGCGCATGGGTCCTCAGGGGTGATATCTaGGCTGGTTCCGGGTCTGGGTCCCAGGTCCCCACC +
Preference number: 3 (lower is better)
Translates to: PGRGAWVLRGDI*AGSGSGSQVPT
Trigger: GGTGGGGACCTGGGACCCAGACCCGGAACCAGCCCAGATATCACCCCTGAGGACCCATGCGCCACGTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR TCA 72 bp CCACCACCCAGGACGTGGCGCATGGGTCCTCAGGGGTaGTATCTGGGCTGGTTCCGGGTCTGGGTCCCAGGT +
Preference number: 3 (lower is better)
Translates to: PPPRTWRMGPQG*YLGWFRVWVPG
Trigger: ACCTGGGACCCAGACCCGGAACCAGCCCAGATATCACCCCTGAGGACCCATGCGCCACGTCCTGGGTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CCA 72 bp CGTGCGGGTCGCGGGGACACCAGCTGTCCGGAGGGCTaGAGGCGCCAGAACCAGGGGCCTTTGAAGAAGAAA +
Preference number: 3 (lower is better)
Translates to: RAGRGDTSCPEG*RRQNQGPLKKK
Trigger: TTTCTTCTTCAAAGGCCCCTGGTTCTGGCGCCTCCAGCCCTCCGGACAGCTGGTGTCCCCGCGACCCGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CAA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCGTTTCCCCTCGGATGTaGGCGATGGCGTCAAAATTG +
Preference number: 3 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGVSPRM*AMASKL
Trigger: CAATTTTGACGCCATCGCCAACATCCGAGGGGAAAC...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR TCA 72 bp GCGGGATGGGAGCAGGCCAACGTCCTGCGGCCTGGTTaGGCTCGCACTGACAATCGCAGGTTTCGGACACGG +
Preference number: 3 (lower is better)
Translates to: AGWEQANVLRPG*ARTDNRRFRTR
Trigger: CCGTGTCCGAAACCTGCGATTGTCAGTGCGAGCTCAACCAGGCCGCAGGACGTTGGCCTGCTCCCATCCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CAA 90 bp GGTAGGTCTTCCCGTTCTGTGGCCACGAGAACACGGCGTCCACCTCCTCTCCCGGGCCTCATAATGGAGTaGGGGGCTGAGGAGTGGCCC +
Preference number: 3 (lower is better)
Translates to: GRSSRSVATRTRRPPPLPGLIME*GAEEWP
Trigger: GGGCCACTCCTCAGCCCCCAACTCCATTATGAGGCC...CGGGAGAGGAGGTGGACGCCGTGTTCTCGTGGCCACAGAACGGGAAGACCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR TCA 72 bp AACAGCCTGGAGAGCAAGGGTCGTCCCTCCAGCCACTaGTTCCACCACCCAGGACGTGGCGCATGGGTCCTC +
Preference number: 3 (lower is better)
Translates to: NSLESKGRPSSH*FHHPGRGAWVL
Trigger: GAGGACCCATGCGCCACGTCCTGGGTGGTGGAATCAGTGGCTGGAGGGACGACCCTTGCTCTCCAGGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR TCA 72 bp GCAGGCCAACGTCCTGCGGCCTGGTTGAGCTCGCACTaGCAATCGCAGGTTTCGGACACGGGGGTCGCTTTG +
Preference number: 3 (lower is better)
Translates to: AGQRPAAWLSSH*QSQVSDTGVAL
Trigger: CAAAGCGACCCCCGTGTCCGAAACCTGCGATTGTCAGTGCGAGCTCAACCAGGCCGCAGGACGTTGGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR GCA 72 bp CAAGAGGAGCAGCGGGATGGGAGCAGGCCAACGTCCTaGGGCCTGGTTGAGCTCGCACTGACAATCGCAGGT +
Preference number: 3 (lower is better)
Translates to: QEEQRDGSRPTS*GLVELALTIAG
Trigger: ACCTGCGATTGTCAGTGCGAGCTCAACCAGGCCGCAGGACGTTGGCCTGCTCCCATCCCGCTGCTCCTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR-3UTR CAA 90 bp TCTTCCCGTTCTGTGGCCACGAGAACACGGCGTCCACCTCCTCTCCCGGGGGCAGAGCCAGGGGTTTCCTaGTGGGCTTGTCATATGGGG +
Preference number: 3 (lower is better)
Translates to: SSRSVATRTRRPPPLPGAEPGVS*WACHMG
Trigger: CCCCATATGACAAGCCCACAAGGAAACCCCTGGCTC...TGCCCCCGGGAGAGGAGGTGGACGCCGTGTTCTCGTGGCCACAGAACGGGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR CCA 72 bp TGGGTGGCGGGGGAGCAACGGAAAAGGTTAACAGCCTaGAGAGCAAGGGTCGTCCCTCCAGCCACTGATTCC +
Preference number: 3 (lower is better)
Translates to: WVAGEQRKRLTA*RARVVPPATDS
Trigger: GGAATCAGTGGCTGGAGGGACGACCCTTGCTCTCCAGGCTGTTAACCTTTTCCGTTGCTCCCCCGCCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CAA 90 bp GGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGCTACTGCCCCCGCAGGGAAGGGGTTCTaGGGGATAGAAGGGTTCCCC +
Preference number: 3 (lower is better)
Translates to: GGTLQSHRNATKQPATAPAGKGF*GIEGFP
Trigger: GGGGAACCCTTCTATCCCCAAGAACCCCTTCCCTGC...GGGGGCAGTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CAA 90 bp CCCTCGGATGTTGGCGATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGCGCCTTCCCATAGAGTaGCTGCAGGCCATCGCGGTC +
Preference number: 3 (lower is better)
Translates to: PSDVGDGVKIALTSIRDGRLPIE*LQAIAV
Trigger: GACCGCGATGGCCTGCAGCAACTCTATGGGAAGGCG...CCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATCGCCAACATCCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR CCA 72 bp ATCTGTTTGTATGAGCAACTGGGGCAACCCCTCGCATaGTTGCTGGGACAGCCGCCCACAGCCTCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: ICLYEQLGQPLA*LLGQPPTASAP
Trigger: TGGAGCTGAGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGCTCATACAAACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR TCA 72 bp GACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTaGACATATTGGTCCTGGGGTGGAGGAACACTGCAG +
Preference number: 3 (lower is better)
Translates to: DSTHGVQAIGVA*TYWSWGGGTLQ
Trigger: CTGCAGTGTTCCTCCACCCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CAA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCTCCACCAGCGTTGAGTaGATGGGAGTCAAGCTGTTC +
Preference number: 3 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGSTSVE*MGVKLF
Trigger: GAACAGCTTGACTCCCATCAACTCAACGCTGGTGGA...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR TCA 72 bp CAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTaGTGGGAGTCAAGCTGTTCTCTCCAGGGTGCAAGC +
Preference number: 3 (lower is better)
Translates to: QGSVPVFPPALS*WESSCSLQGAS
Trigger: GCTTGCACCCTGGAGAGAACAGCTTGACTCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CCA 72 bp GGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGGTaGAGGAACACTGCAGAGCCACAGAAATGCCACGAA +
Preference number: 3 (lower is better)
Translates to: GHRCGLNILVLG*RNTAEPQKCHE
Trigger: TTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCCACCCCAGGACCAATATGTTCAGGCCACACCGATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CAA 90 bp GATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGGGTTTCCTTGTGGGCTaGTCATATGGGGTTTGGGGC +
Preference number: 3 (lower is better)
Translates to: DGVKIALTSIRDGEGWAVGFLVG*SYGVWG
Trigger: GCCCCAAACCCCATATGACAAGCCCACAAGGAAACC...CACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR GCA 72 bp TGGCCTGAACATATTGGTCCTGGGGTGGAGGAACACTaGAGAGCCACAGAAATGCCACGAAACAGCCAGCTA +
Preference number: 3 (lower is better)
Translates to: WPEHIGPGVEEH*RATEMPRNSQL
Trigger: TAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCCACCCCAGGACCAATATGTTCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR-3UTR CAA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCCTTGTCATATGGGGTTaGGGGCGCCTTCCCATAGAG +
Preference number: 3 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPLVIWG*GRLPIE
Trigger: CTCTATGGGAAGGCGCCCCAAACCCCATATGACAAG...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612971.2
3UTR TCA 72 bp TACAAATTTCCCCCTCCTCATACATGGAAAAGAAACTaGCAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAA +
Preference number: 3 (lower is better)
Translates to: YKFPPPHTWKRN*QRPKSFPGSPE
Trigger: TTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGAGGGGGAAATTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp TCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGGGAGCGGCGGAGGTCTaGATGTGCCGCGGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SDRPLAAAGRERRGRRPTGAAEV*MCRGGL
Trigger: GAGGCCGCCGCGGCACATCCAGACCTCCGCCGCTCC...CGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGCCCAGGCTCACGTCCTaGGCCGAGGGCTTCGGGGCG +
Preference number: 4 (lower is better)
Translates to: AGRERRGRRPTHGPSARAPRLTS*AEGFGA
Trigger: CGCCCCGAAGCCCTCGGCGCAGGACGTGAGCCTGGG...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGCCCTCCCAGAAGCGGTaGAGCCGTGCGGGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: AGRERRGRRPTHGPSARAPSQKR*SRAGRG
Trigger: CCCGCGACCCGCACGGCTGCACCGCTTCTGGGAGGG...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp TCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGGCCCCGCCCTCCAGCTaGCGGTCCTGGAACACCCAG +
Preference number: 4 (lower is better)
Translates to: SDRPLAAAGRERRGRRPTAPPSS*RSWNTQ
Trigger: CTGGGTGTTCCAGGACCGGCAGCTGGAGGGCGGGGC...CGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACCCGGGAAGTGCGCGGTaGAGTCAGCGGAGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: VRPPPGGSREGTTGATTDPGSAR*SQRRVP
Trigger: CGGGACCCTCCGCTGACTCCACCGCGCACTTCCCGG...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp ACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGTTGGGCCCCATGGGCTaGGGGGCGTCCGGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: TAPWRQPGGNDGGDDRRMLGPMG*GASGSV
Trigger: GACCGAGCCGGACGCCCCCCAGCCCATGGGGCCCAA...CATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACCCAAGAGGTGGCCCCTaGCCGACCCAGAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: VRPPPGGSREGTTGATTDPRGGP*PTQRPS
Trigger: GGAGGGTCTCTGGGTCGGGCAGGGGCCACCTCTTGG...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp CCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGGCGACGACCGACGCATaGTCCCAGCGCGCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: PTRSSGGGLGRGGRCSVWATTDA*SQRACA
Trigger: GGCGCACGCGCGCTGGGACCATGCGTCGGTCGTCGC...CCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGGAATCCCAGGATGGTTaGGAGGGCGCGGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: AGRERRGRRPTHGPSARAESQDG*EGAGAA
Trigger: CGCCGCTCCCGCGCCCTCTCAACCATCCTGGGATTC...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACAGGCATGGGCTAGGGTaGCCCCCAACCCGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: VRPPPGGSREGTTGATTDRHGLG*PPTRRR
Trigger: CCTTCGACGGGTTGGGGGGCACCCTAGCCCATGCCT...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGCTGGGCCCAGGGAGGTaGCCAAGTTGGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSREGTTGATTDAWSQRALGPGR*PSWVAW
Trigger: CCAGGCCACCCAACTTGGGCACCTCCCTGGGCCCAG...CGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGGGGCGCACCCCGATATaGGGTAAGGGCGCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGRERRGRRPTHGPSARAGRTPI*GKGAAR
Trigger: CCTTGCCGCGCCCTTACCGCATATCGGGGTGCGCCC...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp ACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGGTGGCCACTGTCCCTaGGTCCATGCGGCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: TAPWRQPGGNDGGDDRRMGGHCP*VHAAGL
Trigger: GAGACCGGCCGCATGGACCCAGGGACAGTGGCCACC...CATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACACCCGCACGGTCTCCTaGCTCAGCTGGGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VRPPPGGSREGTTGATTDTRTVS*LSWELW
Trigger: CCAGAGCTCCCAGCTGAGCCAGGAGACCGTGCGGGT...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTGCGACGACCGACGCATaGTCCCAGCGCGCGTGCGCC +
Preference number: 4 (lower is better)
Translates to: HNPRPGPAAGDSAVEGAVATTDA*SQRACA
Trigger: GGCGCACGCGCGCTGGGACCATGCGTCGGTCGTCGC...AACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGCGCGGGCAAAGTCGATaGGGATGTCGGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AGRERRGRRPTHGPSARARGQSR*GCRAPG
Trigger: GCCAGGAGCCCGACATCCTCATCGACTTTGCCCGCG...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp CACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTGGGGGTCCCGGGAAGTaGGCGGTGGAGTCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: HNPRPGPAAGDSAVEGAVGGPGK*AVESAE
Trigger: CTCCGCTGACTCCACCGCGCACTTCCCGGGACCCCC...AACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACAACTTCTCAGGGCTCTaGAGCTGGGCCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VRPPPGGSREGTTGATTDNFSGL*SWAWAG
Trigger: CCCTGCCCAGGCCCAGCTGCAGAGCCCTGAGAAGTT...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCCTGTCCCTGGGTCCATaGGGCCGGTCTCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGLSLGP*GRSPAA
Trigger: GGCTGCCGGAGACCGGCCGCATGGACCCAGGGACAG...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp ACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGCCCAGCACCCGGCCTTaGTCCCAGCCTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TAPWRQPGGNDGGDDRRMPSTRP*SQPLPS
Trigger: AGAGGGAAGAGGCTGGGAGCAAGGCCGGGTGCTGGG...CATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACAGCGGGGCTTACGCATaGTGGCCACTGTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VRPPPGGSREGTTGATTDSGAYA*WPLSLG
Trigger: ACCCAGGGACAGTGGCCACCATGCGTAAGCCCCGCT...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGACCCGCACGGTCTCCTaGCTCAGCTGGGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSREGTTGATTDAWSQRATRTVS*LSWELW
Trigger: CCAGAGCTCCCAGCTGAGCCAGGAGACCGTGCGGGT...CGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACTCCAGCTGCCGGTCCTaGAACACCCAGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: VRPPPGGSREGTTGATTDSSCRS*NTQNWG
Trigger: GCCCCAGTTCTGGGTGTTCCAGGACCGGCAGCTGGA...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCGAATGCCAGACGCAGTaGCCAGGCGGGGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGECQTQ*PGGAGL
Trigger: CAGCCCCGCCCCGCCTGGCCACTGCGTCTGGCATTC...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp ACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGCCCTCGCATGGTTGCTaGGACAGCCGCCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: TAPWRQPGGNDGGDDRRMPSHGC*DSRPQP
Trigger: AGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGG...CATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp TCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGATGGGTCCTCAGGGGTaGTATCTGGGCTGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SDRPLAAAGRERRGRRPTMGPQG*YLGWFR
Trigger: CCGGAACCAGCCCAGATATCACCCCTGAGGACCCAT...CGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGCGTCCCTCCAGCCACTaGTTCCACCACCCAGGACGT +
Preference number: 4 (lower is better)
Translates to: GSREGTTGATTDAWSQRARPSSH*FHHPGR
Trigger: ACGTCCTGGGTGGTGGAATCAGTGGCTGGAGGGACG...CGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp ACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCCTGGGCCCAGGGAGGTaGCCAAGTTGGGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTPDQVQRRGTRPWRALFLGPGR*PSWVAW
Trigger: CCAGGCCACCCAACTTGGGCACCTCCCTGGGCCCAG...GAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp TCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGGAAACAGCCAGCTACTaGCCCCCACAATCCCCGCGA +
Preference number: 4 (lower is better)
Translates to: SDRPLAAAGRERRGRRPTETASY*PPQSPR
Trigger: TCGCGGGGATTGTGGGGGGCAGTAGCTGGCTGTTTC...CGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGAACCCCTCGCATGGTTaGTGGGACAGCCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: AGRERRGRRPTHGPSARANPSHG*WDSRPQ
Trigger: CTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTT...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp ACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGATCGGCCGGAGGGCTaGGATGTGTGTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TTPDQVQRRGTRPWRALFDRPEG*DVCGGP
Trigger: GGGACCCCCACACACATCCCAGCCCTCCGGCCGATC...GAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTGGTGGCCACTGTCCCTaGGTCCATGCGGCCGGTCTC +
Preference number: 4 (lower is better)
Translates to: HNPRPGPAAGDSAVEGAVGGHCP*VHAAGL
Trigger: GAGACCGGCCGCATGGACCCAGGGACAGTGGCCACC...AACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGAGAGGAGCAGCGGGATaGGAGCAGGCCAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: AGRERRGRRPTHGPSARARGAAG*EQANVL
Trigger: CAGGACGTTGGCCTGCTCCCATCCCGCTGCTCCTCT...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCGAAGGCGGGTTCCGGTaGCAGCGCCGGGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGEGGFR*QRRGLR
Trigger: TCTGAGACCCCGGCGCTGCCACCGGAACCCGCCTTC...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCGGGCAACCCCTCGCATaGTTGCTGGGACAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGGQPLA*LLGQPP
Trigger: GGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCC...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp TCTTCCCGTTCTGTGGCCACGAGAACACGGCGTCCACCTCCTCTCCCGGGGGCAGCGCGCGTGCGCCCCTaGAGGCGGGTTCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SSRSVATRTRRPPPLPGAARVRP*RRVPVA
Trigger: TGCCACCGGAACCCGCCTTCAGGGGCGCACGCGCGC...TGCCCCCGGGAGAGGAGGTGGACGCCGTGTTCTCGTGGCCACAGAACGGGAAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR GCA 90 bp CGTTCTGTGGCCACGAGAACACGGCGTCCACCTCCTCTCCCGGGGGCAGCCCCATGGTCCCAGCGCGCGTaGGCCCCTGAAGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: RSVATRTRRPPPLPGAAPWSQRA*APEGGF
Trigger: GAACCCGCCTTCAGGGGCGCACGCGCGCTGGGACCA...TGGGGCTGCCCCCGGGAGAGGAGGTGGACGCCGTGTTCTCGTGGCCACAGAACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp CACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCCGGGAATCCCAGGATaGTTGAGAGGGCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: HNPRPGPAAGDSAVEGAVPGIPG*LRGRGS
Trigger: GCTCCCGCGCCCTCTCAACCATCCTGGGATTCCCGG...AACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGCTCAGCTGGGAGCTCTaGGGGAAGGAACGTACCCTC +
Preference number: 4 (lower is better)
Translates to: AGRERRGRRPTHGPSARALSWEL*GKERTL
Trigger: GAGGGTACGTTCCTTCCCCCAGAGCTCCCAGCTGAG...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GCAACTGGGGCAACCCCTCGCATGGTTGCTGGGACAGCCGCCCACAGCCTCAGCTTGGGCCCCATGGGCTaGGGGGCGTCCGGCTCGGTC +
Preference number: 4 (lower is better)
Translates to: ATGATPRMVAGTAAHSLSLGPMG*GASGSV
Trigger: GACCGAGCCGGACGCCCCCCAGCCCATGGGGCCCAA...GCTGAGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGCTCAGGGGTGATATCTaGGCTGGTTCCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: AGRERRGRRPTHGPSARALRGDI*AGSGSG
Trigger: CCCAGACCCGGAACCAGCCCAGATATCACCCCTGAG...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGCCATCGCGGTCATCCTaGGACAGGCGGTACTTGTCA +
Preference number: 4 (lower is better)
Translates to: AGRERRGRRPTHGPSARAPSRSS*DRRYLS
Trigger: TGACAAGTACCGCCTGTCTCAGGATGACCGCGATGG...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GCAACTGGGGCAACCCCTCGCATGGTTGCTGGGACAGCCGCCCACAGCCTCAGCGGGGGTCCCGGGAAGTaGGCGGTGGAGTCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: ATGATPRMVAGTAAHSLSGGPGK*AVESAE
Trigger: CTCCGCTGACTCCACCGCGCACTTCCCGGGACCCCC...GCTGAGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp ACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCAACTTCTCAGGGCTCTaGAGCTGGGCCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TTPDQVQRRGTRPWRALFNFSGL*SWAWAG
Trigger: CCCTGCCCAGGCCCAGCTGCAGAGCCCTGAGAAGTT...GAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp TCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCTGTTCTCTCCAGGGTaGAAGCAGGGAAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SDRPLAAAGRERRGRRPTLFSPG*KQGRGS
Trigger: AGAACCCCTTCCCTGCTTGCACCCTGGAGAGAACAG...CGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTCAGGCGCTCAGGACTaGCAGGACCCAGAGGATTCA +
Preference number: 4 (lower is better)
Translates to: GSREGTTGATTDAWSQRASGAQD*QDPEDS
Trigger: TGAATCCTCTGGGTCCTGGCAGTCCTGAGCGCCTGA...CGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp CAGCAGGGGCAAGAGGAGCAGCGGGATGGGAGCAGGCCAACGTCCTGCGGCCTGGATCGGCCGGAGGGCTaGGATGTGTGTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QQGQEEQRDGSRPTSCGLDRPEG*DVCGGP
Trigger: GGGACCCCCACACACATCCCAGCCCTCCGGCCGATC...CAGGCCGCAGGACGTTGGCCTGCTCCCATCCCGCTGCTCCTCTTGCCCCTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp CACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTGAGTGTCCCCGGAGATaGGGTGCTCCCCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HNPRPGPAAGDSAVEGAVECPRR*GAPQGR
Trigger: TCTTCCCTGGGGAGCACCCCATCTCCGGGGACACTC...AACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCTCCAGCTGCCGGTCCTaGAACACCCAGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGSSCRS*NTQNWG
Trigger: GCCCCAGTTCTGGGTGTTCCAGGACCGGCAGCTGGA...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGGTGAGAAACTGCGGGTaGGAGAGGGGCAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PTRSSGGGLGRGGRCSVWVRNCG*ERGKAQ
Trigger: CTGTGCCTTGCCCCTCTCCCACCCGCAGTTTCTCAC...CCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGGGGGAATCCACCTCATaGAATGTGAGGCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: GSREGTTGATTDAWSQRAGESTS*NVRPDS
Trigger: GGAGTCAGGCCTCACATTTCATGAGGTGGATTCCCC...CGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp ACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCCTAACGACCCAGGAATaGCAGACGCAGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TTPDQVQRRGTRPWRALFLTTQE*QTQWPG
Trigger: GCCTGGCCACTGCGTCTGGCATTCCTGGGTCGTTAG...GAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp CACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTGAAACAGCCAGCTACTaGCCCCCACAATCCCCGCGA +
Preference number: 4 (lower is better)
Translates to: HNPRPGPAAGDSAVEGAVETASY*PPQSPR
Trigger: TCGCGGGGATTGTGGGGGGCAGTAGCTGGCTGTTTC...AACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACCTCGGATGTTGGCGATaGCGTCAAAATTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: VRPPPGGSREGTTGATTDLGCWR*RQNCPH
Trigger: GTGAGGGCAATTTTGACGCCATCGCCAACATCCGAG...GTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCCTCAGGGGTGATATCTaGGCTGGTTCCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGLRGDI*AGSGSG
Trigger: CCCAGACCCGGAACCAGCCCAGATATCACCCCTGAG...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp ACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGGGTTCCCCATTGAATaGAAGGCAGTTCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TAPWRQPGGNDGGDDRRMGFPIE*KAVLGP
Trigger: TGGGCCCAGAACTGCCTTCCATTCAATGGGGAACCC...CATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp CACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTATGAAATGTGAGGCCTaGCTCCATGCCCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HNPRPGPAAGDSAVEGAVMKCEA*LHAPGH
Trigger: ATGGCCTGGGGCATGGAGTCAGGCCTCACATTTCAT...AACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCTGGTTGAGCTCGCACTaGCAATCGCAGGTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGWLSSH*QSQVSD
Trigger: GTCCGAAACCTGCGATTGTCAGTGCGAGCTCAACCA...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp ACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGTCTTTCCACCAGCGTTaGGTTGATGGGAGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: TAPWRQPGGNDGGDDRRMSFHQR*VDGSQA
Trigger: AGCTTGACTCCCATCAACTCAACGCTGGTGGAAAGA...CATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCCTGTTCTCTCCAGGGTaGAAGCAGGGAAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGLFSPG*KQGRGS
Trigger: AGAACCCCTTCCCTGCTTGCACCCTGGAGAGAACAG...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCAGGAGCGGCGGAGGTCTaGATGTGCCGCGGCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPGAAEV*MCRGGL
Trigger: GAGGCCGCCGCGGCACATCCAGACCTCCGCCGCTCC...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCGGGCGGGCCAAGAGGTaGCCCCTGCCCGACCCAGAG +
Preference number: 4 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVAGRAKR*PLPDPE
Trigger: CTCTGGGTCGGGCAGGGGCCACCTCTTGGCCCGCCC...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR TCA 90 bp CCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGAGAACCAGGGGCCTTTaGAGAAGAAAGTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PTRSSGGGLGRGGRCSVWRTRGL*RRKFPL
Trigger: GAGGGGAAACTTTCTTCTTCAAAGGCCCCTGGTTCT...CCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp CCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGTCTTTCCACCAGCGTTaGGTTGATGGGAGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: PTRSSGGGLGRGGRCSVWSFHQR*VDGSQA
Trigger: AGCTTGACTCCCATCAACTCAACGCTGGTGGAAAGA...CCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCTGTCCCTGGGTCCATaGGGCCGGTCTCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: RGKAQLRSQACPLTTQECLSLGP*GRSPAA
Trigger: GGCTGCCGGAGACCGGCCGCATGGACCCAGGGACAG...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCGAAGTAGGTGTCACCTaGGTTGCTGACGGTGACATC +
Preference number: 4 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGEVGVT*VADGDI
Trigger: GATGTCACCGTCAGCAACGCAGGTGACACCTACTTC...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGGTCCCAGCGCGCGTaGGCCCCTGAAGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVAWSQRA*APEGGF
Trigger: GAACCCGCCTTCAGGGGCGCACGCGCGCTGGGACCA...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GCAACTGGGGCAACCCCTCGCATGGTTGCTGGGACAGCCGCCCACAGCCTCAGCCTCAGCTGGGAGCTCTaGGGGAAGGAACGTACCCTC +
Preference number: 4 (lower is better)
Translates to: ATGATPRMVAGTAAHSLSLSWEL*GKERTL
Trigger: GAGGGTACGTTCCTTCCCCCAGAGCTCCCAGCTGAG...GCTGAGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCTCGGATGTTGGCGATaGCGTCAAAATTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: HNPRPGPAAGDSAVEGAVLGCWR*RQNCPH
Trigger: GTGAGGGCAATTTTGACGCCATCGCCAACATCCGAG...AACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GCAACTGGGGCAACCCCTCGCATGGTTGCTGGGACAGCCGCCCACAGCCTCAGCGGTCTTCCCGTTCTGTaGCCACGAGAACACGGCGTC +
Preference number: 4 (lower is better)
Translates to: ATGATPRMVAGTAAHSLSGLPVL*PREHGV
Trigger: GACGCCGTGTTCTCGTGGCCACAGAACGGGAAGACC...GCTGAGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTGGGTGGCGGGGGAGCAACGGAAAAGGTTAACAGCCTGGAGAGCAAGGGTCGTCGGGGGACTCGGCCGTaGAGGGCGCTGTTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: VGGGGATEKVNSLESKGRRGTRP*RALFGL
Trigger: CAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCG...ACGACCCTTGCTCTCCAGGCTGTTAACCTTTTCCGTTGCTCCCCCGCCACCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTAAAGCTGGCTCTTCCTaGAAAAGGAAGGTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: HNPRPGPAAGDSAVEGAVKAGSS*KRKVLR
Trigger: CCGCAGGACCTTCCTTTTCCAGGAAGAGCCAGCTTT...AACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCGAATGCCAGACGCAGTaGCCAGGCGGGGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGKAQLRSQACPLTTQECECQTQ*PGGAGL
Trigger: CAGCCCCGCCCCGCCTGGCCACTGCGTCTGGCATTC...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GCAACTGGGGCAACCCCTCGCATGGTTGCTGGGACAGCCGCCCACAGCCTCAGCGCGCGGCAAGGGAAATaGCCCAATCTTCGGACGTCC +
Preference number: 4 (lower is better)
Translates to: ATGATPRMVAGTAAHSLSARQGK*PNLRTS
Trigger: GGACGTCCGAAGATTGGGCCATTTCCCTTGCCGCGC...GCTGAGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR TCA 90 bp CAGCAGGGGCAAGAGGAGCAGCGGGATGGGAGCAGGCCAACGTCCTGCGGCCTGGAAGTGGCCCCTAAGTaGCTCTACCCATGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: QQGQEEQRDGSRPTSCGLEVAPK*LYPWGS
Trigger: TGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTC...CAGGCCGCAGGACGTTGGCCTGCTCCCATCCCGCTGCTCCTCTTGCCCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR GCA 90 bp CCCAGGTTCCACCCACCCCTCACTCTAGAGCTAAGGCCTCCCAGGAGGGAGTGCGCTTCTTCCACACGCTaGCGCTCAGAGCGTACCGGC +
Preference number: 4 (lower is better)
Translates to: PRFHPPLTLELRPPRRECASSTR*RSERTG
Trigger: GCCGGTACGCTCTGAGCGGCAGCGTGTGGAAGAAGC...GCACTCCCTCCTGGGAGGCCTTAGCTCTAGAGTGAGGGGTGGGTGGAACCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCGAAGCGGTGCAGCCGTaGGGGTCGCGGGGACACCAG +
Preference number: 4 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGEAVQP*GSRGHQ
Trigger: CTGGTGTCCCCGCGACCCGCACGGCTGCACCGCTTC...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GGGGCGCCTTCCCATAGAGTTGCTGCAGGCCATCGCGGTCATCCTGAGACAGGCAGCAGGCCAACGTCCTaGGGCCTGGTTGAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: GAPSHRVAAGHRGHPETGSRPTS*GLVELA
Trigger: TGCGAGCTCAACCAGGCCGCAGGACGTTGGCCTGCT...GCCTGTCTCAGGATGACCGCGATGGCCTGCAGCAACTCTATGGGAAGGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCGGGCTGGGATGTGTGTaGGGGTCCCGGGAAGTGCGC +
Preference number: 4 (lower is better)
Translates to: RGKAQLRSQACPLTTQECGLGCV*GSREVR
Trigger: GCGCACTTCCCGGGACCCCCACACACATCCCAGCCC...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCGGGCTGGGATGTGTGTaGGGGTCCCGGGAAGTGCGC +
Preference number: 4 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVAGLGCV*GSREVR
Trigger: GCGCACTTCCCGGGACCCCCACACACATCCCAGCCC...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp AGGCCTGAGCCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTGATGGGACGGGGGACTCGGCCGTaGAGGGCGCTGTTCGGTCTG +
Preference number: 4 (lower is better)
Translates to: RPEPGFGPCLSTSVELMGRGTRP*RALFGL
Trigger: CAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCG...TCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGGCTCAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCGCGGGCAAAGTCGATaGGGATGTCGGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGKAQLRSQACPLTTQECRGQSR*GCRAPG
Trigger: GCCAGGAGCCCGACATCCTCATCGACTTTGCCCGCG...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGGCGGAGGTCTGGATGTaGCGCGGCGGCCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: DGVKIALTSIRDGEGWAVAEVWM*RGGLSG
Trigger: CCCCGAGAGGCCGCCGCGGCACATCCAGACCTCCGC...CACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR GCA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGGAAGCGGTGCAGCCGTaGGGGTCGCGGGGACACCAG +
Preference number: 4 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGEAVQP*GSRGHQ
Trigger: CTGGTGTCCCCGCGACCCGCACGGCTGCACCGCTTC...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCACCAGCTGTGCGCGGTTaGAGCTGCCCGAGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPPAVRG*SCPRAN
Trigger: ATTGGCCCTCGGGCAGCTGCAACCGCGCACAGCTGG...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCACTGGGCAGGGTGGGGTaGCGGCAGGTAACCATAGCG +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPLGRVG*RQVTIA
Trigger: CGCTATGGTTACCTGCCGCCACCCCACCCTGCCCAG...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp AGGCCTGAGCCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTGATGGGAGGGCAACCCCTCGCATaGTTGCTGGGACAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RPEPGFGPCLSTSVELMGGQPLA*LLGQPP
Trigger: GGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCC...TCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGGCTCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGGAATCCCAGGATGGTTaGGAGGGCGCGGGAGCGGCG +
Preference number: 4 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGESQDG*EGAGAA
Trigger: CGCCGCTCCCGCGCCCTCTCAACCATCCTGGGATTC...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp TCTTCCCGTTCTGTGGCCACGAGAACACGGCGTCCACCTCCTCTCCCGGGGGCATGGTTGAGCTCGCACTaGCAATCGCAGGTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: SSRSVATRTRRPPPLPGAWLSSH*QSQVSD
Trigger: GTCCGAAACCTGCGATTGTCAGTGCGAGCTCAACCA...TGCCCCCGGGAGAGGAGGTGGACGCCGTGTTCTCGTGGCCACAGAACGGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR TCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCAGTCCTGCGGCCTGGTTaGGCTCGCACTGACAATCGC +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPVLRPG*ARTDNR
Trigger: GCGATTGTCAGTGCGAGCTCAACCAGGCCGCAGGAC...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGCTACTGCCCCCGGCAATGACCAGGCCTaGGCCAGGGTTCGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GGTLQSHRNATKQPATAPGNDQA*ARVRSL
Trigger: CAGGGACCGAACCCTGGCTCAGGCCTGGTCATTGCC...GGGGGCAGTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCGGAGTGGGGACAGGGTaGACGAGGTGCCCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGGVGTG*TRCPQV
Trigger: AACCTGGGGGCACCTCGTTCACCCTGTCCCCACTCC...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp AGGCCTGAGCCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTGATGGGAGGAGTGGGGACAGGGTaGACGAGGTGCCCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RPEPGFGPCLSTSVELMGGVGTG*TRCPQV
Trigger: AACCTGGGGGCACCTCGTTCACCCTGTCCCCACTCC...TCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGGCTCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GGGGCGCCTTCCCATAGAGTTGCTGCAGGCCATCGCGGTCATCCTGAGACAGGCTTCCTGACCCCACCCTaGGTGAGGATTCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GAPSHRVAAGHRGHPETGFLTPP*VRIQGE
Trigger: CTCACCCTGAATCCTCACTCAGGGTGGGGTCAGGAA...GCCTGTCTCAGGATGACCGCGATGGCCTGCAGCAACTCTATGGGAAGGCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR GCA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCAGGCATGGGCTAGGGTaGCCCCCAACCCGTCGAAGG +
Preference number: 4 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGRHGLG*PPTRRR
Trigger: CCTTCGACGGGTTGGGGGGCACCCTAGCCCATGCCT...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGTGTGGCCCCGCCCTCCAGCTaGCGGTCCTGGAACACCCAG +
Preference number: 4 (lower is better)
Translates to: ASKLPSHRSGMGKDGLCVAPPSS*RSWNTQ
Trigger: CTGGGTGTTCCAGGACCGGCAGCTGGAGGGCGGGGC...CACACACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR GCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCAGCAGGCCAACGTCCTaGGGCCTGGTTGAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVASRPTS*GLVELA
Trigger: TGCGAGCTCAACCAGGCCGCAGGACGTTGGCCTGCT...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCAAACCCCTCGCATGGTTaGTGGGACAGCCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPNPSHG*WDSRPQ
Trigger: CTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTT...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CTTCCCATAGAGTTGCTGCAGGCCATCGCGGTCATCCTGAGACAGGCGGTACTTCCGAGCCCCCGTCCGTaGGAACAGACAAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPIELLQAIAVILRQAVLPSPRP*EQTRGL
Trigger: GAGGCCCCTTGTCTGTTCCCACGGACGGGGGCTCGG...AAGTACCGCCTGTCTCAGGATGACCGCGATGGCCTGCAGCAACTCTATGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGGGCTGGTTCCGGGTCTaGGTCCCAGGTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGGWFRV*VPGPHQ
Trigger: CTGGTGGGGACCTGGGACCCAGACCCGGAACCAGCC...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTCCGGCTCGGTCTTGATGCTGTTCTTGGGGAAGCGCCAGTAGTGGGCGCCCTTCCAGGACGTGGCGCATaGGTCCTCAGGGGTGATATC +
Preference number: 4 (lower is better)
Translates to: VRLGLDAVLGEAPVVGALPGRGA*VLRGDI
Trigger: GATATCACCCCTGAGGACCCATGCGCCACGTCCTGG...AAGGGCGCCCACTACTGGCGCTTCCCCAAGAACAGCATCAAGACCGAGCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR TCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCACGTCCGGCTCGGTCTTaGTGCTGTTCTTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPRPARS*CCSWGS
Trigger: GCTTCCCCAAGAACAGCATCAAGACCGAGCCGGACG...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCGCGCGCGTGCGCCCCTaGAGGCGGGTTCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPARVRP*RRVPVA
Trigger: TGCCACCGGAACCCGCCTTCAGGGGCGCACGCGCGC...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp CACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTACATGGAAAAGAAACTaGCAGAGGCCCAAATCGTTT +
Preference number: 4 (lower is better)
Translates to: HNPRPGPAAGDSAVEGAVTWKRN*QRPKSF
Trigger: AAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGT...AACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGGGCAGGGCTCGCTTCTaGTTTCTCGAAGCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGGRARF*FLEAAR
Trigger: CCGCGCGGCTTCGAGAAAGCAGAAGCGAGCCCTGCC...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp GATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGAGCTGTCCGGAGGGCTaGAGGCGCCAGAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: DGVKIALTSIRDGEGWAVSCPEG*RRQNQG
Trigger: CCCCTGGTTCTGGCGCCTCCAGCCCTCCGGACAGCT...CACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCAGTGAGAAACTGCGGGTaGGAGAGGGGCAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPVRNCG*ERGKAQ
Trigger: CTGTGCCTTGCCCCTCTCCCACCCGCAGTTTCTCAC...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGTGTGGGCTGGTTCCGGGTCTaGGTCCCAGGTCCCCACCAG +
Preference number: 4 (lower is better)
Translates to: ASKLPSHRSGMGKDGLCVGWFRV*VPGPHQ
Trigger: CTGGTGGGGACCTGGGACCCAGACCCGGAACCAGCC...CACACACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGCCCTCGCATGGTTGCTaGGACAGCCGCCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGPSHGC*DSRPQP
Trigger: AGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGG...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCCACCTCATGAAATGTaGGGCCTGACTCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: RGKAQLRSQACPLTTQECPPHEM*GLTPCP
Trigger: GGGGCATGGAGTCAGGCCTCACATTTCATGAGGTGG...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp TCCTCATACATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCCCCTCCCAGAAGCGGTaGAGCCGTGCGGGTCGCGGG +
Preference number: 4 (lower is better)
Translates to: SSYMEKKLTEAQIVSWQPPSQKR*SRAGRG
Trigger: CCCGCGACCCGCACGGCTGCACCGCTTCTGGGAGGG...GGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp CCCAGGTTCCACCCACCCCTCACTCTAGAGCTAAGGCCTCCCAGGAGGGAGTGCGCAGAGCCACAGAAATaGCACGAAACAGCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: PRFHPPLTLELRPPRRECAEPQK*HETASY
Trigger: GTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGC...GCACTCCCTCCTGGGAGGCCTTAGCTCTAGAGTGAGGGGTGGGTGGAACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCTGTGGGCTTGTCATATaGGGTTTGGGGCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RGKAQLRSQACPLTTQECCGLVI*GLGRLP
Trigger: GGGAAGGCGCCCCAAACCCCATATGACAAGCCCACA...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCATGTGGGCTTGTCATATaGGGTTTGGGGCGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPCGLVI*GLGRLP
Trigger: GGGAAGGCGCCCCAAACCCCATATGACAAGCCCACA...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGGAACACCCAGAACTaGGGCCCGCTAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVAWNTQN*GPLKRR
Trigger: CCTCCTCTTTAGCGGGCCCCAGTTCTGGGTGTTCCA...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGCTACTGCCCCCCCAGGACGTGGCGCATaGGTCCTCAGGGGTGATATC +
Preference number: 4 (lower is better)
Translates to: GGTLQSHRNATKQPATAPPGRGA*VLRGDI
Trigger: GATATCACCCCTGAGGACCCATGCGCCACGTCCTGG...GGGGGCAGTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CAA 72 bp CCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATaGGTCCTGGGGTGGAGGAACACTGCAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: PWGSGHRCGLNI*VLGWRNTAEPQ
Trigger: CTGTGGCTCTGCAGTGTTCCTCCACCCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp CCCTCGGATGTTGGCGATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGTCAGGGCATAGCTCATaGGGACCCGCACGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PSDVGDGVKIALTSIRDGSGHSS*GPARSP
Trigger: AGGAGACCGTGCGGGTCCTCATGAGCTATGCCCTGA...CCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATCGCCAACATCCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR GCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCAGGGGTGGAGGAACACTaGAGAGCCACAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPGVEEH*RATEMP
Trigger: TGGCATTTCTGTGGCTCTGCAGTGTTCCTCCACCCC...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp TGTTGGCGATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGCTGGGCAGGGTGGGGTaGCGGCAGGTAACCATAGCG +
Preference number: 4 (lower is better)
Translates to: CWRWRQNCPHIDQGWGRMLGRVG*RQVTIA
Trigger: CGCTATGGTTACCTGCCGCCACCCCACCCTGCCCAG...CATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATCGCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR TCA 90 bp GGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGCTACTGCCCCCGGGGAATCCACCTCATaGAATGTGAGGCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: GGTLQSHRNATKQPATAPGESTS*NVRPDS
Trigger: GGAGTCAGGCCTCACATTTCATGAGGTGGATTCCCC...GGGGGCAGTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp AGGCCTGAGCCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTGATGGGAAGTAGTGGGCGCCCTTaGAGAAGTAGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: RPEPGFGPCLSTSVELMGSSGRP*RSRCHL
Trigger: CAGGTGACACCTACTTCTTCAAGGGCGCCCACTACT...TCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGGCTCAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGCTACTGCCCCCAGTAGTGGGCGCCCTTaGAGAAGTAGGTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: GGTLQSHRNATKQPATAPSSGRP*RSRCHL
Trigger: CAGGTGACACCTACTTCTTCAAGGGCGCCCACTACT...GGGGGCAGTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp TGTTGGCGATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGTCCTGCGGCCTGGTTaGGCTCGCACTGACAATCGC +
Preference number: 4 (lower is better)
Translates to: CWRWRQNCPHIDQGWGRMVLRPG*ARTDNR
Trigger: GCGATTGTCAGTGCGAGCTCAACCAGGCCGCAGGAC...CATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATCGCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR TCA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGGCCATCGGTGTGGCCTaGACATATTGGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGAIGVA*TYWSWG
Trigger: ACCCCAGGACCAATATGTTCAGGCCACACCGATGGC...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCGAAGTAGGTGTCACCTaGGTTGCTGACGGTGACATC +
Preference number: 4 (lower is better)
Translates to: RGKAQLRSQACPLTTQECEVGVT*VADGDI
Trigger: GATGTCACCGTCAGCAACGCAGGTGACACCTACTTC...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCAGCTGTCCGGAGGGCTaGAGGCGCCAGAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPSCPEG*RRQNQG
Trigger: CCCCTGGTTCTGGCGCCTCCAGCCCTCCGGACAGCT...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCAATATTGGTCCTGGGGTaGAGGAACACTGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPILVLG*RNTAEP
Trigger: TGGCTCTGCAGTGTTCCTCCACCCCAGGACCAATAT...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCGTTTGTATGAGCAACTaGGGCAACCCCTCGCATGGT +
Preference number: 4 (lower is better)
Translates to: RGKAQLRSQACPLTTQECVCMSN*GNPSHG
Trigger: ACCATGCGAGGGGTTGCCCCAGTTGCTCATACAAAC...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCGCCCAAATCGTTTCCTaGCAGCCCAGAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGAQIVS*QPRIPR
Trigger: CCTGGGAATTCTGGGCTGCCAGGAAACGATTTGGGC...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGTGTGCCATCGCGGTCATCCTaGGACAGGCGGTACTTGTCA +
Preference number: 4 (lower is better)
Translates to: ASKLPSHRSGMGKDGLCVPSRSS*DRRYLS
Trigger: TGACAAGTACCGCCTGTCTCAGGATGACCGCGATGG...CACACACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR TCA 90 bp GGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGCTACTGCCCCCAGAAGGGTTCCCCATTaGATGGAAGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GGTLQSHRNATKQPATAPRRVPH*MEGSSG
Trigger: CCCAGAACTGCCTTCCATTCAATGGGGAACCCTTCT...GGGGGCAGTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp AGGCCTGAGCCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTGATGGGACCACCAGCGTTGAGTTaGTGGGAGTCAAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RPEPGFGPCLSTSVELMGPPALS*WESSCS
Trigger: AGAACAGCTTGACTCCCATCAACTCAACGCTGGTGG...TCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGGCTCAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGTGTGGCCATCGGTGTGGCCTaGACATATTGGTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ASKLPSHRSGMGKDGLCVAIGVA*TYWSWG
Trigger: ACCCCAGGACCAATATGTTCAGGCCACACCGATGGC...CACACACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR TCA 90 bp CCCAGGTTCCACCCACCCCTCACTCTAGAGCTAAGGCCTCCCAGGAGGGAGTGCCTTCTGTCCTCATGCTaGTCTGTTTGTATGAGCAAC +
Preference number: 4 (lower is better)
Translates to: PRFHPPLTLELRPPRRECLLSSC*SVCMSN
Trigger: GTTGCTCATACAAACAGATCAGCATGAGGACAGAAG...GCACTCCCTCCTGGGAGGCCTTAGCTCTAGAGTGAGGGGTGGGTGGAACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCACCAGGGGTTTCCTTGTaGGCTTGTCATATGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPPGVSL*ACHMGF
Trigger: AAACCCCATATGACAAGCCCACAAGGAAACCCCTGG...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCAAAAAGGTTAACAGCCTaGAGAGCAAGGGTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPKRLTA*RARVVP
Trigger: AGGGACGACCCTTGCTCTCCAGGCTGTTAACCTTTT...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTGGGTGGCGGGGGAGCAACGGAAAAGGTTAACAGCCTGGAGAGCAAGGGTCGTCAGCAACTTAGGAAGTaGCCCCTAAGTGACTCTACC +
Preference number: 4 (lower is better)
Translates to: VGGGGATEKVNSLESKGRQQLRK*PLSDST
Trigger: GGTAGAGTCACTTAGGGGCCACTTCCTAAGTTGCTG...ACGACCCTTGCTCTCCAGGCTGTTAACCTTTTCCGTTGCTCCCCCGCCACCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CAA 72 bp CCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTaGATGGGAGTCAAGCTGTTCTCTCCAGGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: PGFGPCLSTSVE*MGVKLFSPGCK
Trigger: CTTGCACCCTGGAGAGAACAGCTTGACTCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGAGAAGGGTTCCCCATTaGATGGAAGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGRRVPH*MEGSSG
Trigger: CCCAGAACTGCCTTCCATTCAATGGGGAACCCTTCT...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGTGTGAGCCCCGCGAACCTCTaGATGACTTTGATGGCATCG +
Preference number: 4 (lower is better)
Translates to: ASKLPSHRSGMGKDGLCVSPANL*MTLMAS
Trigger: CGATGCCATCAAAGTCATGCAGAGGTTCGCGGGGCT...CACACACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR GCA 90 bp GCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGTGTGGGGGTGGAGGAACACTaGAGAGCCACAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: ASKLPSHRSGMGKDGLCVGVEEH*RATEMP
Trigger: TGGCATTTCTGTGGCTCTGCAGTGTTCCTCCACCCC...CACACACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp TCCTCATACATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCGGGGCTTACGCATGGTaGCCACTGTCCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSYMEKKLTEAQIVSWQPGAYAW*PLSLGP
Trigger: TGGACCCAGGGACAGTGGCCACCATGCGTAAGCCCC...GGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp TCCTCATACATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGCGGGGCTTACGCATaGTGGCCACTGTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSYMEKKLTEAQIVSWQPSGAYA*WPLSLG
Trigger: ACCCAGGGACAGTGGCCACCATGCGTAAGCCCCGCT...GGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp CTTCCCATAGAGTTGCTGCAGGCCATCGCGGTCATCCTGAGACAGGCGGTACTTAAAGCTGGCTCTTCCTaGAAAAGGAAGGTCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LPIELLQAIAVILRQAVLKAGSS*KRKVLR
Trigger: CCGCAGGACCTTCCTTTTCCAGGAAGAGCCAGCTTT...AAGTACCGCCTGTCTCAGGATGACCGCGATGGCCTGCAGCAACTCTATGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCAAAAGGTTAACAGCCTaGAGAGCAAGGGTCGTCCCT +
Preference number: 4 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGKRLTA*RARVVP
Trigger: AGGGACGACCCTTGCTCTCCAGGCTGTTAACCTTTT...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp TCCTCATACATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCCGTCCGGCTCGGTCTTaGTGCTGTTCTTGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SSYMEKKLTEAQIVSWQPRPARS*CCSWGS
Trigger: GCTTCCCCAAGAACAGCATCAAGACCGAGCCGGACG...GGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp CATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCATGGGTCCTCAGGGGTaGTATCTGGGCTGGTTCCGG +
Preference number: 4 (lower is better)
Translates to: HGKETDRGPNRFLAAQNSMGPQG*YLGWFR
Trigger: CCGGAACCAGCCCAGATATCACCCCTGAGGACCCAT...GGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGCCACCAGCGTTGAGTTaGTGGGAGTCAAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: DGVKIALTSIRDGEGWAVPPALS*WESSCS
Trigger: AGAACAGCTTGACTCCCATCAACTCAACGCTGGTGG...CACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR TCA 90 bp CTTCCCATAGAGTTGCTGCAGGCCATCGCGGTCATCCTGAGACAGGCGGTACTTAGTGAGGATTCAGGGTaGGTGTGGGATCTGCAAACT +
Preference number: 4 (lower is better)
Translates to: LPIELLQAIAVILRQAVLSEDSG*VWDLQT
Trigger: AGTTTGCAGATCCCACACTCACCCTGAATCCTCACT...AAGTACCGCCTGTCTCAGGATGACCGCGATGGCCTGCAGCAACTCTATGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR GCA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGCGATGGCGTCAAAATTaGCCTCACATCGATCAGGGA +
Preference number: 4 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGRWRQN*PHIDQG
Trigger: TCCCTGATCGATGTGAGGGCAATTTTGACGCCATCG...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp TCCTCATACATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCGGTCTTCCCGTTCTGTaGCCACGAGAACACGGCGTC +
Preference number: 4 (lower is better)
Translates to: SSYMEKKLTEAQIVSWQPGLPVL*PREHGV
Trigger: GACGCCGTGTTCTCGTGGCCACAGAACGGGAAGACC...GGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGCCGAGCCCCCGTCCGTaGGAACAGACAAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GFRVSVGSANLNFPVILMPSPRP*EQTRGL
Trigger: GAGGCCCCTTGTCTGTTCCCACGGACGGGGGCTCGG...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp TCCTCATACATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCCCACCTCATGAAATGTaGGGCCTGACTCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: SSYMEKKLTEAQIVSWQPPPHEM*GLTPCP
Trigger: GGGGCATGGAGTCAGGCCTCACATTTCATGAGGTGG...GGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGTGTGAGAACCAGGGGCCTTTaGAGAAGAAAGTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ASKLPSHRSGMGKDGLCVRTRGL*RRKFPL
Trigger: GAGGGGAAACTTTCTTCTTCAAAGGCCCCTGGTTCT...CACACACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR GCA 90 bp GGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTCTAGAAGAAGCGGAGGTCTGGATGTaGCGCGGCGGCCTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GSANLNFPVILMWDSLEEAEVWM*RGGLSG
Trigger: CCCCGAGAGGCCGCCGCGGCACATCCAGACCTCCGC...TTCTTCTAGACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTGAAGGCGGGTTCCGGTaGCAGCGCCGGGGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VSVGSANLNFPVILMWDSEGGFR*QRRGLR
Trigger: TCTGAGACCCCGGCGCTGCCACCGGAACCCGCCTTC...ACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
3UTR CAA 72 bp CAAAGTCTCCTGCCTTCTGTCCTCATGCTGATCTGTTaGTATGAGCAACTGGGGCAACCCCTCGCATGGTTG +
Preference number: 4 (lower is better)
Translates to: QSLLPSVLMLIC*YEQLGQPLAWL
Trigger: CAACCATGCGAGGGGTTGCCCCAGTTGCTCATACAAACAGATCAGCATGAGGACAGAAGGCAGGAGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGCGTCCCTCCAGCCACTaGTTCCACCACCCAGGACGT +
Preference number: 4 (lower is better)
Translates to: GFRVSVGSANLNFPVILMRPSSH*FHHPGR
Trigger: ACGTCCTGGGTGGTGGAATCAGTGGCTGGAGGGACG...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGCTACTGCCCCCACATGGAAAAGAAACTaGCAGAGGCCCAAATCGTTT +
Preference number: 4 (lower is better)
Translates to: GGTLQSHRNATKQPATAPTWKRN*QRPKSF
Trigger: AAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGT...GGGGGCAGTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTCCGGGAATCCCAGGATaGTTGAGAGGGCGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: VSVGSANLNFPVILMWDSPGIPG*LRGRGS
Trigger: GCTCCCGCGCCCTCTCAACCATCCTGGGATTCCCGG...ACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGGAGTGTCCCCGGAGATaGGGTGCTCCCCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GFRVSVGSANLNFPVILMECPRR*GAPQGR
Trigger: TCTTCCCTGGGGAGCACCCCATCTCCGGGGACACTC...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCCACATCGATCAGGGATaGGGAAGGATGGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPHIDQG*GRMGCV
Trigger: CACACAGCCCATCCTTCCCCATCCCTGATCGATGTG...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCGGGTTCCCCATTGAATaGAAGGCAGTTCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPGFPIE*KAVLGP
Trigger: TGGGCCCAGAACTGCCTTCCATTCAATGGGGAACCC...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGCTAACGACCCAGGAATaGCAGACGCAGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GFRVSVGSANLNFPVILMLTTQE*QTQWPG
Trigger: GCCTGGCCACTGCGTCTGGCATTCCTGGGTCGTTAG...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp CCCTCGGATGTTGGCGATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGGTGAGTGTGGGATCTaGAAACTTAAATTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PSDVGDGVKIALTSIRDGGECGI*KLKFPS
Trigger: ACTGGGAAATTTAAGTTTGCAGATCCCACACTCACC...CCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATCGCCAACATCCGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CCA 90 bp GTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTAGAGGAGCAGCGGGATaGGAGCAGGCCAACGTCCTG +
Preference number: 4 (lower is better)
Translates to: VSVGSANLNFPVILMWDSRGAAG*EQANVL
Trigger: CAGGACGTTGGCCTGCTCCCATCCCGCTGCTCCTCT...ACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp TCCTCATACATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCATATTGGTCCTGGGGTaGAGGAACACTGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSYMEKKLTEAQIVSWQPILVLG*RNTAEP
Trigger: TGGCTCTGCAGTGTTCCTCCACCCCAGGACCAATAT...GGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATGTATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCGTTTGTATGAGCAACTaGGGCAACCCCTCGCATGGT +
Preference number: 4 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPVCMSN*GNPSHG
Trigger: ACCATGCGAGGGGTTGCCCCAGTTGCTCATACAAAC...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTTTCCTGACCCCACCCTaGGTGAGGATTCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: VSVGSANLNFPVILMWDSFLTPP*VRIQGE
Trigger: CTCACCCTGAATCCTCACTCAGGGTGGGGTCAGGAA...ACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGGAAGTGGCCCCTAAGTaGCTCTACCCATGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GFRVSVGSANLNFPVILMEVAPK*LYPWGS
Trigger: TGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTC...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGAGCCCCGCGAACCTCTaGATGACTTTGATGGCATCG +
Preference number: 4 (lower is better)
Translates to: GFRVSVGSANLNFPVILMSPANL*MTLMAS
Trigger: CGATGCCATCAAAGTCATGCAGAGGTTCGCGGGGCT...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTCTAGAAGAAGCTTCTTCCACACGCTaGCGCTCAGAGCGTACCGGC +
Preference number: 4 (lower is better)
Translates to: GSANLNFPVILMWDSLEEASSTR*RSERTG
Trigger: GCCGGTACGCTCTGAGCGGCAGCGTGTGGAAGAAGC...TTCTTCTAGACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp GGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTCTAGAAGAATCAGGGCATAGCTCATaGGGACCCGCACGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSANLNFPVILMWDSLEESGHSS*GPARSP
Trigger: AGGAGACCGTGCGGGTCCTCATGAGCTATGCCCTGA...TTCTTCTAGACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR TCA 90 bp CATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCTTCTGTCCTCATGCTaGTCTGTTTGTATGAGCAAC +
Preference number: 4 (lower is better)
Translates to: HGKETDRGPNRFLAAQNSLLSSC*SVCMSN
Trigger: GTTGCTCATACAAACAGATCAGCATGAGGACAGAAG...GGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR GCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGCGATGGCGTCAAAATTaGCCTCACATCGATCAGGGA +
Preference number: 4 (lower is better)
Translates to: GFRVSVGSANLNFPVILMRWRQN*PHIDQG
Trigger: TCCCTGATCGATGTGAGGGCAATTTTGACGCCATCG...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGATTCAGGGTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTTTCCCCTCGGATGTTaGCGATGGCGTCAAAATTGC +
Preference number: 4 (lower is better)
Translates to: GFRVSVGSANLNFPVILMFPLGC*RWRQNC
Trigger: GCAATTTTGACGCCATCGCCAACATCCGAGGGGAAA...CATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCACCCTGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTCTAGAAGAATGGAACACCCAGAACTaGGGCCCGCTAAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSANLNFPVILMWDSLEEWNTQN*GPLKRR
Trigger: CCTCCTCTTTAGCGGGCCCCAGTTCTGGGTGTTCCA...TTCTTCTAGACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTCTAGAAGAACACATCGATCAGGGATaGGGAAGGATGGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GSANLNFPVILMWDSLEEHIDQG*GRMGCV
Trigger: CACACAGCCCATCCTTCCCCATCCCTGATCGATGTG...TTCTTCTAGACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTTTTCCCCTCGGATGTTaGCGATGGCGTCAAAATTGC +
Preference number: 4 (lower is better)
Translates to: VSVGSANLNFPVILMWDSFPLGC*RWRQNC
Trigger: GCAATTTTGACGCCATCGCCAACATCCGAGGGGAAA...ACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GTGAGTGTGGGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTTTCAGGCCATCGGTGTaGCCTGAACATATTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VSVGSANLNFPVILMWDSFRPSV*PEHIGP
Trigger: AGGACCAATATGTTCAGGCCACACCGATGGCCTGAA...ACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCCCACACTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CCA 90 bp GGATCTGCAAACTTAAATTTCCCAGTGATTCTGATGTGGGATAGTCTAGAAGAACAGCAACTTAGGAAGTaGCCCCTAAGTGACTCTACC +
Preference number: 4 (lower is better)
Translates to: GSANLNFPVILMWDSLEEQQLRK*PLSDST
Trigger: GGTAGAGTCACTTAGGGGCCACTTCCTAAGTTGCTG...TTCTTCTAGACTATCCCACATCAGAATCACTGGGAAATTTAAGTTTGCAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS CCA 90 bp GGCCGGAGGGCTGGGATGTGTGTGGGGGTCCCGGGAAGTGCGCGGTaGAGTCAGCGGAGGGTCCCGGAGGGCCAGGGTCGCGCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: GRRAGMCVGVPGSAR*SQRRVPEGQGRAAG
Trigger: CCCAGCGGCGCGACCCTGGCCCTCCGGGACCCTCCGCTGACTCCACCGCGCACTTCCCGGGACCCCCACACACATCCCAGCCCTCCGGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGGGGCAGTCCAGCCAGTaGGGCCCCATGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GSREGTTGATTDAWSQRAGQSSQ*GPMGWG
Trigger: CCCCCAGCCCATGGGGCCCAACTGGCTGGACTGCCC...CGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS GCA 90 bp AGGGATCGGCCGGAGGGCTGGGATGTGTGTGGGGGTCCCGGGAAGTaGGCGGTGGAGTCAGCGGAGGGTCCCGGAGGGCCAGGGTCGCGC +
Preference number: 5 (lower is better)
Translates to: RDRPEGWDVCGGPGK*AVESAEGPGGPGSR
Trigger: GCGCGACCCTGGCCCTCCGGGACCCTCCGCTGACTCCACCGCGCACTTCCCGGGACCCCCACACACATCCCAGCCCTCCGGCCGATCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS TCA 90 bp GCTTCTTCCACACGCTGCCGCTCAGAGCGTACCGGCGACGCCGCCTaGCCAGCCCCGCCACCCCCAGCACGTCAGGCAGGGAGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: ASSTRCRSERTGDAA*PAPPPPARQAGSSG
Trigger: CCCGCTGCTCCCTGCCTGACGTGCTGGGGGTGGCGGGGCTGGTCAGGCGGCGTCGCCGGTACGCTCTGAGCGGCAGCGTGTGGAAGAAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336577.9
ENST00000570755.1
ENST00000612971.2
CDS GCA 90 bp ATCTTCGGACGTCCAGCGACAAGGGGCGGGCCAAGAGGTGGCCCCTaGCCGACCCAGAGACCCTCCTCCGACGCAGGACGCCCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: IFGRPATRGGPRGGP*PTQRPSSDAGRPGG
Trigger: CCCGCCCGGGCGTCCTGCGTCGGAGGAGGGTCTCTGGGTCGGGCAGGGGCCACCTCTTGGCCCGCCCCTTGTCGCTGGACGTCCGAAGAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS CCA 90 bp CCGGCACCGAGTAGGGAGGGATCGGCCGGAGGGCTGGGATGTGTGTaGGGGTCCCGGGAAGTGCGCGGTGGAGTCAGCGGAGGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: PAPSREGSAGGLGCV*GSREVRGGVSGGSR
Trigger: CCGGGACCCTCCGCTGACTCCACCGCGCACTTCCCGGGACCCCCACACACATCCCAGCCCTCCGGCCGATCCCTCCCTACTCGGTGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS CCA 90 bp CCGCCACCCCCAGCACGTCAGGCAGGGAGCAGCGGGGCTTACGCATaGTGGCCACTGTCCCTGGGTCCATGCGGCCGGTCTCCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PPPPARQAGSSGAYA*WPLSLGPCGRSPAA
Trigger: GGCTGCCGGAGACCGGCCGCATGGACCCAGGGACAGTGGCCACCATGCGTAAGCCCCGCTGCTCCCTGCCTGACGTGCTGGGGGTGGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGCGCCTTCCCATAGAGTaGCTGCAGGCCATCGCGGTC +
Preference number: 5 (lower is better)
Translates to: GSREGTTGATTDAWSQRARLPIE*LQAIAV
Trigger: GACCGCGATGGCCTGCAGCAACTCTATGGGAAGGCG...CGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp TCCGACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGGCAGGGAAGGGGTTCTaGGGGATAGAAGGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: SDRPLAAAGRERRGRRPTAGKGF*GIEGFP
Trigger: GGGGAACCCTTCTATCCCCAAGAACCCCTTCCCTGC...CGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGTCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGGCAGGGAAGGGGTTCTaGGGGATAGAAGGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: AGRERRGRRPTHGPSARAAGKGF*GIEGFP
Trigger: GGGGAACCCTTCTATCCCCAAGAACCCCTTCCCTGC...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCCAACCCCTCGCATGGTaGCTGGGACAGCCGCCCACA +
Preference number: 5 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGQPLAW*LGQPPT
Trigger: TGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTG...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS CCA 90 bp GGGCCGGGCGCACCCCGATATGCGGTAAGGGCGCGGCAAGGGAAATaGCCCAATCTTCGGACGTCCAGCGACAAGGGGCGGGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: GPGAPRYAVRARQGK*PNLRTSSDKGRAKR
Trigger: CCTCTTGGCCCGCCCCTTGTCGCTGGACGTCCGAAGATTGGGCCATTTCCCTTGCCGCGCCCTTACCGCATATCGGGGTGCGCCCGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CAA 90 bp GCAACTGGGGCAACCCCTCGCATGGTTGCTGGGACAGCCGCCCACAGCCTCAGCGGAATCCCAGGATGGTaGAGAGGGCGCGGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: ATGATPRMVAGTAAHSLSGIPGW*RGRGSG
Trigger: GCCGCTCCCGCGCCCTCTCAACCATCCTGGGATTCC...GCTGAGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp ACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGCTTGTCATATGGGGTTaGGGGCGCCTTCCCATAGAG +
Preference number: 5 (lower is better)
Translates to: TAPWRQPGGNDGGDDRRMLVIWG*GRLPIE
Trigger: CTCTATGGGAAGGCGCCCCAAACCCCATATGACAAG...CATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp ACCGCCCCCTGGCGGCAGCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGCGATGGCGTCAAAATaGCCCTCACATCGATCAGGG +
Preference number: 5 (lower is better)
Translates to: TAPWRQPGGNDGGDDRRMAMASK*PSHRSG
Trigger: CCCTGATCGATGTGAGGGCAATTTTGACGCCATCGC...CATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGCTGCCGCCAGGGGGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGTGTGGCCTGAACATATaGGTCCTGGGGTGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: AGRERRGRRPTHGPSARACGLNI*VLGWRN
Trigger: GTTCCTCCACCCCAGGACCAATATGTTCAGGCCACA...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp ACAACCCCCGACCAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGAGCCAGGGGTTTCCTaGTGGGCTTGTCATATGGGG +
Preference number: 5 (lower is better)
Translates to: TTPDQVQRRGTRPWRALFEPGVS*WACHMG
Trigger: CCCCATATGACAAGCCCACAAGGAAACCCCTGGCTC...GAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTGGTCGGGGGTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp CAGGTCCAGCGGCGGGGGACTCGGCCGTGGAGGGCGCTGTTCGGTCTGGATGGCGCGATGGCGTCAAAATaGCCCTCACATCGATCAGGG +
Preference number: 5 (lower is better)
Translates to: QVQRRGTRPWRALFGLDGAMASK*PSHRSG
Trigger: CCCTGATCGATGTGAGGGCAATTTTGACGCCATCGC...GCCATCCAGACCGAACAGCGCCCTCCACGGCCGAGTCCCCCGCCGCTGGACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GCCGGGAGGGAACGACGGGGGCGACGACCGACGCATGGTCCCAGCGCGCGTGCGCAGAACCAGGGGCCTTaGAAGAAGAAAGTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: AGRERRGRRPTHGPSARAQNQGP*KKKVSP
Trigger: AGGGGAAACTTTCTTCTTCAAAGGCCCCTGGTTCTG...CGCACGCGCGCTGGGACCATGCGTCGGTCGTCGCCCCCGTCGTTCCCTCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS GCA 90 bp GTCCCTGGGTCCATGCGGCCGGTCTCCGGCAGCCCCGCGAACCTCTaGATGACTTTGATGGCATCGCGCAACTTCTCAGGGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VPGSMRPVSGSPANL*MTLMASRNFSGLCS
Trigger: GCTGCAGAGCCCTGAGAAGTTGCGCGATGCCATCAAAGTCATGCAGAGGTTCGCGGGGCTGCCGGAGACCGGCCGCATGGACCCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp CCCAGGTTCCACCCACCCCTCACTCTAGAGCTAAGGCCTCCCAGGAGGGAGTGCCAACCCCTCGCATGGTaGCTGGGACAGCCGCCCACA +
Preference number: 5 (lower is better)
Translates to: PRFHPPLTLELRPPRRECQPLAW*LGQPPT
Trigger: TGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTG...GCACTCCCTCCTGGGAGGCCTTAGCTCTAGAGTGAGGGGTGGGTGGAACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCGGAATCCCAGGATGGTaGAGAGGGCGCGGGAGCGGC +
Preference number: 5 (lower is better)
Translates to: RGKAQLRSQACPLTTQECGIPGW*RGRGSG
Trigger: GCCGCTCCCGCGCCCTCTCAACCATCCTGGGATTCC...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp CCCTCGGATGTTGGCGATGGCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGGGCAGTCCAGCCAGTaGGGCCCCATGGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PSDVGDGVKIALTSIRDGGQSSQ*GPMGWG
Trigger: CCCCCAGCCCATGGGGCCCAACTGGCTGGACTGCCC...CCCATCCCTGATCGATGTGAGGGCAATTTTGACGCCATCGCCAACATCCGAGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CAA 90 bp GCAACTGGGGCAACCCCTCGCATGGTTGCTGGGACAGCCGCCCACAGCCTCAGCTCCCCTCGCCGTCTTTaGACCCAAAAGTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ATGATPRMVAGTAAHSLSSPRRL*TQKSRS
Trigger: AGACCTGGACTTTTGGGTCAAAAGACGGCGAGGGGA...GCTGAGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000336577.9
CDS-3UTR CAA 90 bp CAGCAGGGGCAAGAGGAGCAGCGGGATGGGAGCAGGCCAACGTCCTGCGGCCTGTCCACCAGCGTTGAGTaGATGGGAGTCAAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: QQGQEEQRDGSRPTSCGLSTSVE*MGVKLF
Trigger: GAACAGCTTGACTCCCATCAACTCAACGCTGGTGGA...CAGGCCGCAGGACGTTGGCCTGCTCCCATCCCGCTGCTCCTCTTGCCCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CAA 90 bp GTGGGTGGCGGGGGAGCAACGGAAAAGGTTAACAGCCTGGAGAGCAAGGGTCGTGGCCTCATAATGGAGTaGGGGGCTGAGGAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: VGGGGATEKVNSLESKGRGLIME*GAEEWP
Trigger: GGGCCACTCCTCAGCCCCCAACTCCATTATGAGGCC...ACGACCCTTGCTCTCCAGGCTGTTAACCTTTTCCGTTGCTCCCCCGCCACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCAGGCCTCATAATGGAGTaGGGGGCTGAGGAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPGLIME*GAEEWP
Trigger: GGGCCACTCCTCAGCCCCCAACTCCATTATGAGGCC...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp TCTTCCCGTTCTGTGGCCACGAGAACACGGCGTCCACCTCCTCTCCCGGGGGCAGGTTTCCTTGTGGGCTaGTCATATGGGGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: SSRSVATRTRRPPPLPGAGFLVG*SYGVWG
Trigger: GCCCCAAACCCCATATGACAAGCCCACAAGGAAACC...TGCCCCCGGGAGAGGAGGTGGACGCCGTGTTCTCGTGGCCACAGAACGGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CAA 90 bp GCAACTGGGGCAACCCCTCGCATGGTTGCTGGGACAGCCGCCCACAGCCTCAGCGTTTCCCCTCGGATGTaGGCGATGGCGTCAAAATTG +
Preference number: 5 (lower is better)
Translates to: ATGATPRMVAGTAAHSLSVSPRM*AMASKL
Trigger: CAATTTTGACGCCATCGCCAACATCCGAGGGGAAAC...GCTGAGGCTGTGGGCGGCTGTCCCAGCAACCATGCGAGGGGTTGCCCCAGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp AGGCCTGAGCCAGGGTTCGGTCCCTGTCTTTCCACCAGCGTTGAGTTGATGGGACGCCTTCCCATAGAGTaGCTGCAGGCCATCGCGGTC +
Preference number: 5 (lower is better)
Translates to: RPEPGFGPCLSTSVELMGRLPIE*LQAIAV
Trigger: GACCGCGATGGCCTGCAGCAACTCTATGGGAAGGCG...TCCCATCAACTCAACGCTGGTGGAAAGACAGGGACCGAACCCTGGCTCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp CCCAGGTTCCACCCACCCCTCACTCTAGAGCTAAGGCCTCCCAGGAGGGAGTGCGGTTTCCTTGTGGGCTaGTCATATGGGGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: PRFHPPLTLELRPPRRECGFLVG*SYGVWG
Trigger: GCCCCAAACCCCATATGACAAGCCCACAAGGAAACC...GCACTCCCTCCTGGGAGGCCTTAGCTCTAGAGTGAGGGGTGGGTGGAACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GTGGGTGGCGGGGGAGCAACGGAAAAGGTTAACAGCCTGGAGAGCAAGGGTCGTGCGTCCGGCTCGGTCTaGATGCTGTTCTTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: VGGGGATEKVNSLESKGRASGSV*MLFLGK
Trigger: CTTCCCCAAGAACAGCATCAAGACCGAGCCGGACGC...ACGACCCTTGCTCTCCAGGCTGTTAACCTTTTCCGTTGCTCCCCCGCCACCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp AGGAAGTGGCCCCTAAGTGACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCGCGTCCGGCTCGGTCTaGATGCTGTTCTTGGGGAAG +
Preference number: 5 (lower is better)
Translates to: RKWPLSDSTHGVQAIGVAASGSV*MLFLGK
Trigger: CTTCCCCAAGAACAGCATCAAGACCGAGCCGGACGC...GGCCACACCGATGGCCTGAACCCCATGGGTAGAGTCACTTAGGGGCCACTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp AGGGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCGAGCCAGGGGTTTCCTaGTGGGCTTGTCATATGGGG +
Preference number: 5 (lower is better)
Translates to: RGKAQLRSQACPLTTQECEPGVS*WACHMG
Trigger: CCCCATATGACAAGCCCACAAGGAAACCCCTGGCTC...GCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GGGCAAGGCACAGCTTCGCAGTCAGGCCTGTCCTCTAACGACCCAGGAATGCCACTTGTCATATGGGGTTaGGGGCGCCTTCCCATAGAG +
Preference number: 5 (lower is better)
Translates to: GQGTASQSGLSSNDPGMPLVIWG*GRLPIE
Trigger: CTCTATGGGAAGGCGCCCCAAACCCCATATGACAAG...TGGCATTCCTGGGTCGTTAGAGGACAGGCCTGACTGCGAAGCTGTGCCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCTCCAGCTGTGCGCGGTaGCAGCTGCCCGAGGGCCAA +
Preference number: 5 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPSSCAR*QLPEGQ
Trigger: TTGGCCCTCGGGCAGCTGCAACCGCGCACAGCTGGA...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CAA 90 bp ACTCTACCCATGGGGTTCAGGCCATCGGTGTGGCCTGAACATATTGGTCCTGGGTGTGGCCTGAACATATaGGTCCTGGGGTGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: TLPMGFRPSVWPEHIGPGCGLNI*VLGWRN
Trigger: GTTCCTCCACCCCAGGACCAATATGTTCAGGCCACA...CCCAGGACCAATATGTTCAGGCCACACCGATGGCCTGAACCCCATGGGTAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GGAGGAACACTGCAGAGCCACAGAAATGCCACGAAACAGCCAGCTACTGCCCCCAACCTCTGCATGACTTaGATGGCATCGCGCAACTTC +
Preference number: 5 (lower is better)
Translates to: GGTLQSHRNATKQPATAPNLCMT*MASRNF
Trigger: GAAGTTGCGCGATGCCATCAAAGTCATGCAGAGGTT...GGGGGCAGTAGCTGGCTGTTTCGTGGCATTTCTGTGGCTCTGCAGTGTTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GCTCCAGGAAGCACTAGGGGGTCACTGAGGCTGGACAGCAACTTAGGAAGTGGCAACCTCTGCATGACTTaGATGGCATCGCGCAACTTC +
Preference number: 5 (lower is better)
Translates to: APGSTRGSLRLDSNLGSGNLCMT*MASRNF
Trigger: GAAGTTGCGCGATGCCATCAAAGTCATGCAGAGGTT...GCCACTTCCTAAGTTGCTGTCCAGCCTCAGTGACCCCCTAGTGCTTCCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp GCGTCAAAATTGCCCTCACATCGATCAGGGATGGGGAAGGATGGGCTGTGTGTGGTTTCCCCTCGGATGTaGGCGATGGCGTCAAAATTG +
Preference number: 5 (lower is better)
Translates to: ASKLPSHRSGMGKDGLCVVSPRM*AMASKL
Trigger: CAATTTTGACGCCATCGCCAACATCCGAGGGGAAAC...CACACACAGCCCATCCTTCCCCATCCCTGATCGATGTGAGGGCAATTTTGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CAA 90 bp CATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCTCCACCAGCGTTGAGTaGATGGGAGTCAAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: HGKETDRGPNRFLAAQNSSTSVE*MGVKLF
Trigger: GAACAGCTTGACTCCCATCAACTCAACGCTGGTGGA...GGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS-3UTR CAA 90 bp ATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCCTGCTGAGAGGCCTTTaGACCCAAAAGTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: MEKKLTEAQIVSWQPRIPLLRGL*TQKSRS
Trigger: AGACCTGGACTTTTGGGTCAAAAGGCCTCTCAGCAG...GGGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS-3UTR CAA 90 bp CATGGAAAAGAAACTGACAGAGGCCCAAATCGTTTCCTGGCAGCCCAGAATTCCCAGAACCAGGGGCCTTaGAAGAAGAAAGTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: HGKETDRGPNRFLAAQNSQNQGP*KKKVSP
Trigger: AGGGGAAACTTTCTTCTTCAAAGGCCCCTGGTTCTG...GGAATTCTGGGCTGCCAGGAAACGATTTGGGCCTCTGTCAGTTTCTTTTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS TCA 72 bp ACACGCTGCCGCTCAGAGCGTACCGGCGACGCCGCCTaGCCAGCCCCGCCACCCCCAGCACGTCAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: TRCRSERTGDAA*PAPPPPARQAG
Trigger: CCCTGCCTGACGTGCTGGGGGTGGCGGGGCTGGTCAGGCGGCGTCGCCGGTACGCTCTGAGCGGCAGCGTGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336577.9
ENST00000570755.1
ENST00000612971.2
CDS CCA 72 bp CAGGGCTCGCTTCTGCTTTCTCGAAGCCGCGCGGCCTaGGGGAGGGCGGCCCGGGCCTTCGGCTCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: QGSLLLSRSRAA*GRAARAFGSAS
Trigger: GCTGGCTGAGCCGAAGGCCCGGGCCGCCCTCCCCCAGGCCGCGCGGCTTCGAGAAAGCAGAAGCGAGCCCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS GCA 72 bp CCGGAGGGCTGGGATGTGTGTGGGGGTCCCGGGAAGTaGGCGGTGGAGTCAGCGGAGGGTCCCGGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: PEGWDVCGGPGK*AVESAEGPGGP
Trigger: TGGCCCTCCGGGACCCTCCGCTGACTCCACCGCGCACTTCCCGGGACCCCCACACACATCCCAGCCCTCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS GCA 72 bp CGTCCAGCGACAAGGGGCGGGCCAAGAGGTGGCCCCTaGCCGACCCAGAGACCCTCCTCCGACGCAGGACGC +
Preference number: 6 (lower is better)
Translates to: RPATRGGPRGGP*PTQRPSSDAGR
Trigger: GCGTCCTGCGTCGGAGGAGGGTCTCTGGGTCGGGCAGGGGCCACCTCTTGGCCCGCCCCTTGTCGCTGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS CCA 72 bp GCGCCGCTGGGTCGGGTGGGCCCGGGAATCCCAGGATaGTTGAGAGGGCGCGGGAGCGGCGGAGGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: APLGRVGPGIPG*LRGRGSGGGLD
Trigger: ATCCAGACCTCCGCCGCTCCCGCGCCCTCTCAACCATCCTGGGATTCCCGGGCCCACCCGACCCAGCGGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS CCA 72 bp GCTGGGATGTGTGTGGGGGTCCCGGGAAGTGCGCGGTaGAGTCAGCGGAGGGTCCCGGAGGGCCAGGGTCGC +
Preference number: 6 (lower is better)
Translates to: AGMCVGVPGSAR*SQRRVPEGQGR
Trigger: GCGACCCTGGCCCTCCGGGACCCTCCGCTGACTCCACCGCGCACTTCCCGGGACCCCCACACACATCCCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS CCA 72 bp GCACGTCAGGCAGGGAGCAGCGGGGCTTACGCATGGTaGCCACTGTCCCTGGGTCCATGCGGCCGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: ARQAGSSGAYAW*PLSLGPCGRSP
Trigger: CGGAGACCGGCCGCATGGACCCAGGGACAGTGGCCACCATGCGTAAGCCCCGCTGCTCCCTGCCTGACGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS CCA 72 bp AGTAGGGAGGGATCGGCCGGAGGGCTGGGATGTGTGTaGGGGTCCCGGGAAGTGCGCGGTGGAGTCAGCGGA +
Preference number: 6 (lower is better)
Translates to: SREGSAGGLGCV*GSREVRGGVSG
Trigger: TCCGCTGACTCCACCGCGCACTTCCCGGGACCCCCACACACATCCCAGCCCTCCGGCCGATCCCTCCCTACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS CCA 72 bp CCAGCACGTCAGGCAGGGAGCAGCGGGGCTTACGCATaGTGGCCACTGTCCCTGGGTCCATGCGGCCGGTCT +
Preference number: 6 (lower is better)
Translates to: PARQAGSSGAYA*WPLSLGPCGRS
Trigger: AGACCGGCCGCATGGACCCAGGGACAGTGGCCACCATGCGTAAGCCCCGCTGCTCCCTGCCTGACGTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336577.9
ENST00000570755.1
ENST00000612971.2
CDS GCA 72 bp GACAGCCACGGCAAACAGGTCGGTCCCCTCGCCGTCTaGAGGAGAAAGTGGGTGAGAGCTGCGGCCGCCCCT +
Preference number: 6 (lower is better)
Translates to: DSHGKQVGPLAV*RRKWVRAAAAP
Trigger: AGGGGCGGCCGCAGCTCTCACCCACTTTCTCCTGCAGACGGCGAGGGGACCGACCTGTTTGCCGTGGCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575441.1
CDS CAA 90 bp TCCATGCGGCCGGTCTCCGGCAGCCCCGCGAACCTCTGCATGACTTaGATGGCATCGCGCAACTTCTCAGGGCTCTGCAGCTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SMRPVSGSPANLCMT*MASRNFSGLCSWAW
Trigger: CCAGGCCCAGCTGCAGAGCCCTGAGAAGTTGCGCGATGCCATCAAAGTCATGCAGAGGTTCGCGGGGCTGCCGGAGACCGGCCGCATGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2
CDS CCA 72 bp GCACCCCGATATGCGGTAAGGGCGCGGCAAGGGAAATaGCCCAATCTTCGGACGTCCAGCGACAAGGGGCGG +
Preference number: 6 (lower is better)
Translates to: APRYAVRARQGK*PNLRTSSDKGR
Trigger: CCGCCCCTTGTCGCTGGACGTCCGAAGATTGGGCCATTTCCCTTGCCGCGCCCTTACCGCATATCGGGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612971.2
CDS GCA 72 bp TCCATGCGGCCGGTCTCCGGCAGCCCCGCGAACCTCTaGATGACTTTGATGGCATCGCGCAACTTCTCAGGG +
Preference number: 6 (lower is better)
Translates to: SMRPVSGSPANL*MTLMASRNFSG
Trigger: CCCTGAGAAGTTGCGCGATGCCATCAAAGTCATGCAGAGGTTCGCGGGGCTGCCGGAGACCGGCCGCATGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336577.9
ENST00000612971.2