RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMP24 (Homo sapiens)

Ensembl gene IDs: ENSG00000125966

Ensembl transcript IDs: ENST00000246186.8

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCAGCCTAGGGCCCTGCTGGCCCTGGTGAGCACTGGCCAGAGCTaGCCCTCAGACCCTGGTGAGGAAGGGCCTGGCTGGCCAGACCAA +
Preference number: 1 (lower is better)
Translates to: PQPRALLALVSTGQS*PSDPGEEGPGWPDQ
Trigger: TTGGTCTGGCCAGCCAGGCCCTTCCTCACCAGGGTCTGAGGGGCAGCTCTGGCCAGTGCTCACCAGGGCCAGCAGGGCCCTAGGCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 90 bp CCACAGGGTCGGGGGCAAGGCCCATGCAGGCTCAGTGAGCAGGGGTaGCATCCGAGACCCGGCCAGCACGCTGGAGACTGCCTGACACCT +
Preference number: 1 (lower is better)
Translates to: PQGRGQGPCRLSEQG*HPRPGQHAGDCLTP
Trigger: AGGTGTCAGGCAGTCTCCAGCGTGCTGGCCGGGTCTCGGATGCCACCCCTGCTCACTGAGCCTGCATGGGCCTTGCCCCCGACCCTGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR TCA 90 bp ATCCCAGAGACCACAGGGTCGGGGGCAAGGCCCATGCAGGCTCAGTaGGCAGGGGTGGCATCCGAGACCCGGCCAGCACGCTGGAGACTG +
Preference number: 1 (lower is better)
Translates to: IPETTGSGARPMQAQ*AGVASETRPARWRL
Trigger: CAGTCTCCAGCGTGCTGGCCGGGTCTCGGATGCCACCCCTGCTCACTGAGCCTGCATGGGCCTTGCCCCCGACCCTGTGGTCTCTGGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR TCA 90 bp GCCAGGAGTGGAGCTGTGGTACCTCATGGACACCACAGGATGCCGTaGCCACAGGGGCTCCTCCTGGCATGGTCCCTGCCTCCGGATGGA +
Preference number: 1 (lower is better)
Translates to: ARSGAVVPHGHHRMP*PQGLLLAWSLPPDG
Trigger: TCCATCCGGAGGCAGGGACCATGCCAGGAGGAGCCCCTGTGGTCACGGCATCCTGTGGTGTCCATGAGGTACCACAGCTCCACTCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR TCA 90 bp TGGGGAGCCTGGCGGGAGGCGGGGGTGCCTAGAGCTTTCAAGAAGTaGGAGCACCAACCTGAGGAGTGGACAGGGACCAGGAAGTGGGGG +
Preference number: 1 (lower is better)
Translates to: WGAWREAGVPRAFKK*EHQPEEWTGTRKWG
Trigger: CCCCCACTTCCTGGTCCCTGTCCACTCCTCAGGTTGGTGCTCTCACTTCTTGAAAGCTCTAGGCACCCCCGCCTCCCGCCAGGCTCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR GCA 90 bp CTGGGTGCCAGACACCCACCCTGGGGCACAGCCCCCATAATTCCCTaGCCCACGCTCAGCCTAGGCCAATGCACCCACCACTTCAGCTGT +
Preference number: 1 (lower is better)
Translates to: LGARHPPWGTAPIIP*PTLSLGQCTHHFSC
Trigger: ACAGCTGAAGTGGTGGGTGCATTGGCCTAGGCTGAGCGTGGGGCAGGGAATTATGGGGGCTGTGCCCCAGGGTGGGTGTCTGGCACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR GCA 90 bp TTCCAGCCAGGAGTGGAGCTGTGGTACCTCATGGACACCACAGGATaGCGTGACCACAGGGGCTCCTCCTGGCATGGTCCCTGCCTCCGG +
Preference number: 1 (lower is better)
Translates to: FQPGVELWYLMDTTG*RDHRGSSWHGPCLR
Trigger: CCGGAGGCAGGGACCATGCCAGGAGGAGCCCCTGTGGTCACGGCATCCTGTGGTGTCCATGAGGTACCACAGCTCCACTCCTGGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 90 bp CAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTaGTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCAC +
Preference number: 1 (lower is better)
Translates to: QLLGCLGARVALAAP*SLSPGGGPLCWPHH
Trigger: GTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 90 bp CAGCTTGGGGCTGCTACCGGTAGGGGTGTCCTTCTAAGAGCAGTGTaGGAAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCT +
Preference number: 1 (lower is better)
Translates to: QLGAATGRGVLLRAV*EDGPSERGQQGPSS
Trigger: AGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAGGACACCCCTACCGGTAGCAGCCCCAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 90 bp CCTAGAGGGGTCCACAGATGGGGACACAAGACCCAGCCAGCCCACTaGATGGCCCGGGCAAGTAACAACCTCTCTGTGCTTCATCTGAGG +
Preference number: 1 (lower is better)
Translates to: PRGVHRWGHKTQPAH*MARASNNLSVLHLR
Trigger: CCTCAGATGAAGCACAGAGAGGTTGTTACTTGCCCGGGCCATCCAGTGGGCTGGCTGGGTCTTGTGTCCCCATCTGTGGACCCCTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR TCA 90 bp AGCAAGGGCCAAGCTCTGGGAAAACACTGCTTCCAGCCGAGAGATTaGGTCGGCCTCAGAGTAGCTGGAGTCGGCCTCAGAGTAGTGGGG +
Preference number: 1 (lower is better)
Translates to: SKGQALGKHCFQPRD*VGLRVAGVGLRVVG
Trigger: CCCCACTACTCTGAGGCCGACTCCAGCTACTCTGAGGCCGACTCAATCTCTCGGCTGGAAGCAGTGTTTTCCCAGAGCTTGGCCCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR TCA 90 bp GCCCGGGCAAGTAACAACCTCTCTGTGCTTCATCTGAGGGCACGGTaGGAGTTACCGTCGGCCTCCCAGGGCCTAACACGAGTTTCATGT +
Preference number: 1 (lower is better)
Translates to: ARASNNLSVLHLRAR*ELPSASQGLTRVSC
Trigger: ACATGAAACTCGTGTTAGGCCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGGTTGTTACTTGCCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 90 bp GAGGGGAGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATaGGGTCAGCTTCTGCCCCAGCTCTGTAGCCATAGGAGCAGAGCT +
Preference number: 1 (lower is better)
Translates to: EGSGGRSQTRIFLQK*GQLLPQLCSHRSRA
Trigger: AGCTCTGCTCCTATGGCTACAGAGCTGGGGCAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 90 bp AAAACACTGCTTCCAGCCGAGAGATTGAGTCGGCCTCAGAGTAGCTaGAGTCGGCCTCAGAGTAGTGGGGGCACTGAGCACTTCAGACGC +
Preference number: 1 (lower is better)
Translates to: KTLLPAERLSRPQSS*SRPQSSGGTEHFRR
Trigger: GCGTCTGAAGTGCTCAGTGCCCCCACTACTCTGAGGCCGACTCCAGCTACTCTGAGGCCGACTCAATCTCTCGGCTGGAAGCAGTGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR GCA 90 bp AGAGACCCTGACAAGTGGAGCAGGTTTCCTGAGGGATCTGCCGTCTaGCAGCAGGGAAACCCAGGCTTGTTGCTCACTGTGTCAGAAGCA +
Preference number: 1 (lower is better)
Translates to: RDPDKWSRFPEGSAV*QQGNPGLLLTVSEA
Trigger: TGCTTCTGACACAGTGAGCAACAAGCCTGGGTTTCCCTGCTGGCAGACGGCAGATCCCTCAGGAAACCTGCTCCACTTGTCAGGGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR GCA 90 bp GACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTaGCCCAGCTCTGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGT +
Preference number: 1 (lower is better)
Translates to: DGHKLGSSSRNGVSF*PSSVAIGAELSYWG
Trigger: ACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACAGAGCTGGGGCAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR TCA 90 bp GTGAGAGTTACCGTCGGCCTCCCAGGGCCTAACACGAGTTTCATGTaGGTGGACAGGTGTGAGCTAATAAAGTGCTTTGCAAAGTATAAA +
Preference number: 1 (lower is better)
Translates to: VRVTVGLPGPNTSFM*VDRCELIKCFAKYK
Trigger: TTTATACTTTGCAAAGCACTTTATTAGCTCACACCTGTCCACTCACATGAAACTCGTGTTAGGCCCTGGGAGGCCGACGGTAACTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 90 bp CAGTCACCTCTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATaGGACAGTAGTGACAGGACATTTAAATATTCACGATGTGACAGC +
Preference number: 1 (lower is better)
Translates to: QSPLVHLKPQAAFAK*DSSDRTFKYSRCDS
Trigger: GCTGTCACATCGTGAATATTTAAATGTCCTGTCACTACTGTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAGAGGTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp CTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCTGGGGGAGGGAGGCTGGCAGCTGGGTaGCAGACACCCACCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LGARVALAAPWSLSPGGGRLAAG*QTPTLG
Trigger: CCCCAGGGTGGGTGTCTGGCACCCAGCTGCCAGCCT...CCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CAA 90 bp CTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTaGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGAC +
Preference number: 2 (lower is better)
Translates to: LGCLGARVALAAPWS*SPGGGPLCWPHHQD
Trigger: GTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp CTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCTGGGGGAGGGGTCCCTGCCTCCGGATaGAGCCTGGCCTATTCCCTT +
Preference number: 2 (lower is better)
Translates to: LGARVALAAPWSLSPGGGVPASG*SLAYSL
Trigger: AAGGGAATAGGCCAGGCTCCATCCGGAGGCAGGGAC...CCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAGAGGGATCTGCCGTCTaGCAGCAGGGAAACCCAGGC +
Preference number: 2 (lower is better)
Translates to: AGQALGTPAGDSEGRASEEGSAV*QQGNPG
Trigger: GCCTGGGTTTCCCTGCTGGCAGACGGCAGATCCCTC...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGGGGGGAGGGCCGCTATaGTGGCCTCATCACCAAGAC +
Preference number: 2 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGGGGPL*WPHHQD
Trigger: GTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCC...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGAAGGACTCCCAGGCTCTaGCAGTGTTGGCCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRRTPRL*QCWPCS
Trigger: GCTGCAGGGCCAACACTGGCAGAGCCTGGGAGTCCT...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAACTTGTCAGACCCAGCTaGGCCACAGCCCTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: AGQALGTPAGDSEGRASELVRPS*ATALPA
Trigger: TGCAGGCAGGGCTGTGGCCCAGCTGGGTCTGACAAG...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTTGGTCCTTGTCGCCTaGGGGAGGGCCGCTATGCTG +
Preference number: 2 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQLVLVA*GRAAML
Trigger: CAGCATAGCGGCCCTCCCCCAGGCGACAAGGACCAA...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGAAGCACTGGCCAGAGCTaGCCCTCAGACCCTGGTGAG +
Preference number: 2 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRSTGQS*PSDPGE
Trigger: CTCACCAGGGTCTGAGGGGCAGCTCTGGCCAGTGCT...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAGCTTCCCACAGAGGGTaGTGGGTTCCAGCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: AGQALGTPAGDSEGRASEASHRG*WVPARS
Trigger: ACTCCTGGCTGGAACCCAGCACCCTCTGTGGGAAGC...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp CTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCTGGGGGAGGGCTGACCAGCAGGTGTTaGCAAAAGGGGACCAGGACT +
Preference number: 2 (lower is better)
Translates to: LGARVALAAPWSLSPGGGLTSRC*QKGTRT
Trigger: AGTCCTGGTCCCCTTTTGCCAACACCTGCTGGTCAG...CCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGGCACTTCAGACGCCCTaGTCCCCTTCCGAAGGACTC +
Preference number: 2 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQALQTP*SPSEGL
Trigger: GAGTCCTTCGGAAGGGGACCAGGGCGTCTGAAGTGC...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR TCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCCACCACAGGATGCCGTaGCCACAGGGGCTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: HLTGEAELQAASDRLEQSHHRMP*PQGLLL
Trigger: CAGGAGGAGCCCCTGTGGTCACGGCATCCTGTGGTG...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR TCA 90 bp AGGGGTGTCCTTCTAAGAGCAGTGTGGGAAGATGGGCCCAGTGAGCGAGGTCAGCTCCCGGATGGGGGATaGGAGCTAGTGCTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: RGVLLRAVWEDGPSERGQLPDGG*ELVLAS
Trigger: GGAAGCCAGCACTAGCTCTCATCCCCCATCCGGGAG...CTGACCTCGCTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAGGACACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCATGGACACCACAGGATaGCGTGACCACAGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAMDTTG*RDHRGS
Trigger: GGAGCCCCTGTGGTCACGGCATCCTGTGGTGTCCAT...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCCAGAAGGCTGGCAGCTaGGTGCCAGACACCCACCCT +
Preference number: 2 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCQKAGS*VPDTHP
Trigger: AGGGTGGGTGTCTGGCACCCAGCTGCCAGCCTTCTG...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCGGGGACCAGGACTGGTaGTATCTCCCGGATGGGGGA +
Preference number: 2 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCGDQDW*YLPDGG
Trigger: TCCCCCATCCGGGAGATACCACCAGTCCTGGTCCCC...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAAAAGGGGACCAGGACTaGTGGTATCTCCCGGATGGG +
Preference number: 2 (lower is better)
Translates to: AGQALGTPAGDSEGRASEKGDQD*WYLPDG
Trigger: CCCATCCGGGAGATACCACCAGTCCTGGTCCCCTTT...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAACGGCCTCAGAGTAGCTaGAGTCGGCCTCAGAGTAGT +
Preference number: 2 (lower is better)
Translates to: AGQALGTPAGDSEGRASERPQSS*SRPQSS
Trigger: ACTACTCTGAGGCCGACTCCAGCTACTCTGAGGCCG...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR TCA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGTCTCCGAAGAGACCCTaGCAAGTGGAGCAGGTTTCC +
Preference number: 2 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGSPKRP*QVEQVS
Trigger: GGAAACCTGCTCCACTTGTCAGGGTCTCTTCGGAGA...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR TCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGAGCTCCAGGCTGCAAGTaGCAGACTGGAGCAAAGCTG +
Preference number: 2 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRAPGCK*QTGAKL
Trigger: CAGCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGC...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp AGGGGTGTCCTTCTAAGAGCAGTGTGGGAAGATGGGCCCAGTGAGCGAGGTCAGTGCCAGTGTTGGCCCTaGAGCCATCTCTGCCTCACC +
Preference number: 2 (lower is better)
Translates to: RGVLLRAVWEDGPSERGQCQCWP*SHLCLT
Trigger: GGTGAGGCAGAGATGGCTGCAGGGCCAACACTGGCA...CTGACCTCGCTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAGGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCGAGGAAGGGCCTGGCTaGCCAGACCAAGTGGATAGA +
Preference number: 2 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAEEGPG*PDQVDR
Trigger: TCTATCCACTTGGTCTGGCCAGCCAGGCCCTTCCTC...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp ACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGCCCCAGCTCTGTAGCCATGGCCCTGGTGAGCACTaGCCAGAGCTGCCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: TRIFLQKWGQLLPQLCSHGPGEH*PELPLR
Trigger: TCTGAGGGGCAGCTCTGGCCAGTGCTCACCAGGGCC...ATGGCTACAGAGCTGGGGCAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp GCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAGCCCAGGACAGAAGGCTaGCAGCTGGGTGCCAGACAC +
Preference number: 2 (lower is better)
Translates to: AESQWALMNPLALSRAPQPRTEG*QLGARH
Trigger: GTGTCTGGCACCCAGCTGCCAGCCTTCTGTCCTGGG...CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCACCTCCGGATGGAGCCTaGCCTATTCCCTTAAGTAGG +
Preference number: 2 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSPPDGA*PIPLSR
Trigger: CCTACTTAAGGGAATAGGCCAGGCTCCATCCGGAGG...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGAGCTGTGGTACCTCATaGACACCACAGGATGCCGTG +
Preference number: 2 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGSCGTS*TPQDAV
Trigger: CACGGCATCCTGTGGTGTCCATGAGGTACCACAGCT...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGGTGGTATCTCCCGGATaGGGGATGAGAGCTAGTGCT +
Preference number: 2 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQVVSPG*GMRASA
Trigger: AGCACTAGCTCTCATCCCCCATCCGGGAGATACCAC...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAATCACGATGTGACAGCTaGGTCCTTGTCAGACCCAGC +
Preference number: 2 (lower is better)
Translates to: AGQALGTPAGDSEGRASESRCDS*VLVRPS
Trigger: GCTGGGTCTGACAAGGACCCAGCTGTCACATCGTGA...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CAA 90 bp CAGCAAGGGCCAAGCTCTGGGAAAACACTGCTTCCAGCCGAGAGATaGAGTCGGCCTCAGAGTAGCTGGAGTCGGCCTCAGAGTAGTGGG +
Preference number: 2 (lower is better)
Translates to: QQGPSSGKTLLPAER*SRPQSSWSRPQSSG
Trigger: CCCACTACTCTGAGGCCGACTCCAGCTACTCTGAGGCCGACTCAATCTCTCGGCTGGAAGCAGTGTTTTCCCAGAGCTTGGCCCTTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR TCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCGTGGAGCAGGTTTCCTaGGGGATCTGCCGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: HLTGEAELQAASDRLEQSVEQVS*GICRLP
Trigger: TGGCAGACGGCAGATCCCTCAGGAAACCTGCTCCAC...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCCTCAGCCTAGGCCAATaGACCCACCACTTCAGCTGT +
Preference number: 2 (lower is better)
Translates to: CSHRSRAQLLGCLGARVALSLGQ*THHFSC
Trigger: ACAGCTGAAGTGGTGGGTGCATTGGCCTAGGCTGAG...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGTCCTGGCATGGTCCCTaGCTCCGGATGGAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLSWHGP*LRMEPG
Trigger: GCCAGGCTCCATCCGGAGGCAGGGACCATGCCAGGA...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR GCA 90 bp ACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGCCCCAGCTCTGTAGCCATGCTGGGCCACAGCCCTaGCTGCAGCATGTGACCCTA +
Preference number: 2 (lower is better)
Translates to: TRIFLQKWGQLLPQLCSHAGPQP*LQHVTL
Trigger: TAGGGTCACATGCTGCAGGCAGGGCTGTGGCCCAGC...ATGGCTACAGAGCTGGGGCAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGGGGCTCCTCCTGGCATaGTCCCTGCCTCCGGATGGA +
Preference number: 2 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLGLLLA*SLPPDG
Trigger: TCCATCCGGAGGCAGGGACCATGCCAGGAGGAGCCC...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGAGAGACCCTGACAAGTaGAGCAGGTTTCCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGRDPDK*SRFPEG
Trigger: TCCCTCAGGAAACCTGCTCCACTTGTCAGGGTCTCT...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCGGAGGGCCGCTATGCTaGCCTCATCACCAAGACAGT +
Preference number: 2 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCGGPLC*PHHQDS
Trigger: ACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCC...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCGCCTTAGCAGCACCTTaGTCCTTGTCGCCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: HLTGEAELQAASDRLEQSALAAP*SLSPGG
Trigger: TCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGC...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCGCAGAGCTCAGCTACTaGGGTGTCTGGGCGCTAGAG +
Preference number: 2 (lower is better)
Translates to: HLTGEAELQAASDRLEQSAELSY*GVWALE
Trigger: CTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGC...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CAA 90 bp GAGACCCGGCCAGCACGCTGGAGACTGCCTGACACCTTTTTGGCTTaGGCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: ETRPARWRLPDTFLA*AESQWALMNPLALS
Trigger: AGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGCCAAAGCCAAAAAGGTGTCAGGCAGTCTCCAGCGTGCTGGCCGGGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGGGTTCCAGCCAGGAGTaGAGCTGTGGTACCTCATGG +
Preference number: 2 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLGSSQE*SCGTSW
Trigger: CCATGAGGTACCACAGCTCCACTCCTGGCTGGAACC...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CAA 90 bp GTAGTGACAGGACATTTAAATATTCACGATGTGACAGCTGGGTCCTaGTCAGACCCAGCTGGGCCACAGCCCTGCCTGCAGCATGTGACC +
Preference number: 2 (lower is better)
Translates to: VVTGHLNIHDVTAGS*SDPAGPQPCLQHVT
Trigger: GGTCACATGCTGCAGGCAGGGCTGTGGCCCAGCTGGGTCTGACAAGGACCCAGCTGTCACATCGTGAATATTTAAATGTCCTGTCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGCCAGGAGTGGAGCTGTaGTACCTCATGGACACCACA +
Preference number: 2 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLPGVEL*YLMDTT
Trigger: TGTGGTGTCCATGAGGTACCACAGCTCCACTCCTGG...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp AGACAGTCACCTCTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATGGGACGCTGGCCAGACCAAGTaGATAGAGAGGGCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: RQSPLVHLKPQAAFAKWDAGQTK*IERALG
Trigger: GCCCAGAGCCCTCTCTATCCACTTGGTCTGGCCAGC...GTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAGAGGTGACTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGTGTGACCCTAAATCCTaGGTCTCCGAAGAGACCCTG +
Preference number: 2 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLCDPKS*VSEETL
Trigger: CAGGGTCTCTTCGGAGACCCAGGATTTAGGGTCACA...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGGCAGCCTTTGCAAAATaGGACAGTAGTGACAGGACA +
Preference number: 2 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLAAFAK*DSSDRT
Trigger: TGTCCTGTCACTACTGTCCCATTTTGCAAAGGCTGC...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 72 bp CGGGGGCAAGGCCCATGCAGGCTCAGTGAGCAGGGGTaGCATCCGAGACCCGGCCAGCACGCTGGAGACTGC +
Preference number: 3 (lower is better)
Translates to: RGQGPCRLSEQG*HPRPGQHAGDC
Trigger: GCAGTCTCCAGCGTGCTGGCCGGGTCTCGGATGCCACCCCTGCTCACTGAGCCTGCATGGGCCTTGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR GCA 72 bp CAATCCCAGAGACCACAGGGTCGGGGGCAAGGCCCATaGAGGCTCAGTGAGCAGGGGTGGCATCCGAGACCC +
Preference number: 3 (lower is better)
Translates to: QSQRPQGRGQGP*RLSEQGWHPRP
Trigger: GGGTCTCGGATGCCACCCCTGCTCACTGAGCCTGCATGGGCCTTGCCCCCGACCCTGTGGTCTCTGGGATTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 72 bp GGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTaGTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGG +
Preference number: 3 (lower is better)
Translates to: GCLGARVALAAP*SLSPGGGPLCW
Trigger: CCAGCATAGCGGCCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR TCA 72 bp GGAGCTGTGGTACCTCATGGACACCACAGGATGCCGTaGCCACAGGGGCTCCTCCTGGCATGGTCCCTGCCT +
Preference number: 3 (lower is better)
Translates to: GAVVPHGHHRMP*PQGLLLAWSLP
Trigger: AGGCAGGGACCATGCCAGGAGGAGCCCCTGTGGTCACGGCATCCTGTGGTGTCCATGAGGTACCACAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR GCA 72 bp GGAGTGGAGCTGTGGTACCTCATGGACACCACAGGATaGCGTGACCACAGGGGCTCCTCCTGGCATGGTCCC +
Preference number: 3 (lower is better)
Translates to: GVELWYLMDTTG*RDHRGSSWHGP
Trigger: GGGACCATGCCAGGAGGAGCCCCTGTGGTCACGGCATCCTGTGGTGTCCATGAGGTACCACAGCTCCACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR TCA 72 bp TGGCGGGAGGCGGGGGTGCCTAGAGCTTTCAAGAAGTaGGAGCACCAACCTGAGGAGTGGACAGGGACCAGG +
Preference number: 3 (lower is better)
Translates to: WREAGVPRAFKK*EHQPEEWTGTR
Trigger: CCTGGTCCCTGTCCACTCCTCAGGTTGGTGCTCTCACTTCTTGAAAGCTCTAGGCACCCCCGCCTCCCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR GCA 72 bp GGGTGGCATCCGAGACCCGGCCAGCACGCTGGAGACTaGCTGACACCTTTTTGGCTTTGGCAGAGAGCCAGT +
Preference number: 3 (lower is better)
Translates to: GWHPRPGQHAGD*LTPFWLWQRAS
Trigger: ACTGGCTCTCTGCCAAAGCCAAAAAGGTGTCAGGCAGTCTCCAGCGTGCTGGCCGGGTCTCGGATGCCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 72 bp TCCTCAGTGACAAGCAGGGCTGCCTCCGCCGTACTGTaGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCT +
Preference number: 3 (lower is better)
Translates to: SSVTSRAASAVL*SKAGQALGTPA
Trigger: AGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAGGCAGCCCTGCTTGTCACTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CAA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGATCTGACCAGCAGGTGTaGGCAAAAGGGGACCAGGAC +
Preference number: 3 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRSDQQV*AKGDQD
Trigger: GTCCTGGTCCCCTTTTGCCAACACCTGCTGGTCAGA...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 72 bp CTTCCAGCCGAGAGATTGAGTCGGCCTCAGAGTAGCTaGAGTCGGCCTCAGAGTAGTGGGGGCACTGAGCAC +
Preference number: 3 (lower is better)
Translates to: LPAERLSRPQSS*SRPQSSGGTEH
Trigger: GTGCTCAGTGCCCCCACTACTCTGAGGCCGACTCCAGCTACTCTGAGGCCGACTCAATCTCTCGGCTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 72 bp GCTGCTACCGGTAGGGGTGTCCTTCTAAGAGCAGTGTaGGAAGATGGGCCCAGTGAGCGAGGTCAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: AATGRGVLLRAV*EDGPSERGQQG
Trigger: CCCTTGCTGACCTCGCTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAGGACACCCCTACCGGTAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 72 bp GTCCACAGATGGGGACACAAGACCCAGCCAGCCCACTaGATGGCCCGGGCAAGTAACAACCTCTCTGTGCTT +
Preference number: 3 (lower is better)
Translates to: VHRWGHKTQPAH*MARASNNLSVL
Trigger: AAGCACAGAGAGGTTGTTACTTGCCCGGGCCATCCAGTGGGCTGGCTGGGTCTTGTGTCCCCATCTGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR GCA 72 bp GACAAGTGGAGCAGGTTTCCTGAGGGATCTGCCGTCTaGCAGCAGGGAAACCCAGGCTTGTTGCTCACTGTG +
Preference number: 3 (lower is better)
Translates to: DKWSRFPEGSAV*QQGNPGLLLTV
Trigger: CACAGTGAGCAACAAGCCTGGGTTTCCCTGCTGGCAGACGGCAGATCCCTCAGGAAACCTGCTCCACTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 72 bp CTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTaGAGCAAAGCTGGGGACAGTGACAATAGAGGGGAG +
Preference number: 3 (lower is better)
Translates to: LVRLSSRLQVTD*SKAGDSDNRGE
Trigger: CTCCCCTCTATTGTCACTGTCCCCAGCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 72 bp ACAGATGGGGACACAAGACCCAGCCAGCCCACTGGATaGCCCGGGCAAGTAACAACCTCTCTGTGCTTCATC +
Preference number: 3 (lower is better)
Translates to: TDGDTRPSQPTG*PGQVTTSLCFI
Trigger: GATGAAGCACAGAGAGGTTGTTACTTGCCCGGGCCATCCAGTGGGCTGGCTGGGTCTTGTGTCCCCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CAA 90 bp AGGGGTGTCCTTCTAAGAGCAGTGTGGGAAGATGGGCCCAGTGAGCGAGGTCAGCAGGGAAACCCAGGCTaGTTGCTCACTGTGTCAGAA +
Preference number: 3 (lower is better)
Translates to: RGVLLRAVWEDGPSERGQQGNPG*LLTVSE
Trigger: TTCTGACACAGTGAGCAACAAGCCTGGGTTTCCCTG...CTGACCTCGCTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAGGACACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR TCA 72 bp AGTAACAACCTCTCTGTGCTTCATCTGAGGGCACGGTaGGAGTTACCGTCGGCCTCCCAGGGCCTAACACGA +
Preference number: 3 (lower is better)
Translates to: SNNLSVLHLRAR*ELPSASQGLTR
Trigger: TCGTGTTAGGCCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGGTTGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR-3UTR CAA 90 bp AGGGGTGTCCTTCTAAGAGCAGTGTGGGAAGATGGGCCCAGTGAGCGAGGTCAGAGCCTCAAGCAGCCTTaGCAAAATGGGACAGTAGTG +
Preference number: 3 (lower is better)
Translates to: RGVLLRAVWEDGPSERGQSLKQP*QNGTVV
Trigger: CACTACTGTCCCATTTTGCAAAGGCTGCTTGAGGCT...CTGACCTCGCTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAGGACACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR GCA 72 bp AAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTaGCCCAGCTCTGTAGCCATAGGAGCAGAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: KLGSSSRNGVSF*PSSVAIGAELS
Trigger: GCTGAGCTCTGCTCCTATGGCTACAGAGCTGGGGCAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 72 bp CTGCCTGACACCTTTTTGGCTTTGGCAGAGAGCCAGTaGGCATTGATGAACCCATTGGCCTTGTCTAGGGCT +
Preference number: 3 (lower is better)
Translates to: LPDTFLALAESQ*ALMNPLALSRA
Trigger: AGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGCCAAAGCCAAAAAGGTGTCAGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR TCA 72 bp ACCGTCGGCCTCCCAGGGCCTAACACGAGTTTCATGTaGGTGGACAGGTGTGAGCTAATAAAGTGCTTTGCA +
Preference number: 3 (lower is better)
Translates to: TVGLPGPNTSFM*VDRCELIKCFA
Trigger: TGCAAAGCACTTTATTAGCTCACACCTGTCCACTCACATGAAACTCGTGTTAGGCCCTGGGAGGCCGACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CCA 72 bp CTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATaGGACAGTAGTGACAGGACATTTAAATATTCACGA +
Preference number: 3 (lower is better)
Translates to: LVHLKPQAAFAK*DSSDRTFKYSR
Trigger: TCGTGAATATTTAAATGTCCTGTCACTACTGTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCGGTGCCTGGTGTGGATaGCCGGTCCCCGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAGAWCG*PVPEGR
Trigger: CCGCCCCTCGGGGACCGGCCATCCACACCAGGCACC...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGGGTAGCCAGGGTCCGTaGCCCGCCGCTCCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQGSQGP*PAAPRC
Trigger: ACAGCGAGGAGCGGCGGGCCACGGACCCTGGCTACC...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACCTGCCAGGAGCCAATaGGGAGCCTGGCGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRPARSQ*GAWREA
Trigger: CGCCTCCCGCCAGGCTCCCCATTGGCTCCTGGCAGG...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CAA 72 bp CTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTaGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: LGARVALAAPWS*SPGGGPLCWPH
Trigger: ATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGGGAAGATGGGCCCAGTaGGCGAGGTCAGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQGRWAQ*ARSARA
Trigger: GGCCCTTGCTGACCTCGCTCACTGGGCCCATCTTCC...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCTGGAAGCCTCTAGGCTaGGCCCTCTGGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAWKPLG*ALWAWP
Trigger: GGGCCAGGCCCAGAGGGCTCAGCCTAGAGGCTTCCA...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp AGGGGACCAGGACTGGTGGTATCTCCCGGATGGGGGATGAGAGCTAGTGCTGGCCATAGGCTGCGTCGATaGGGGCAGGCAGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RGPGLVVSPGWGMRASAGHRLRR*GQAGPS
Trigger: GGAAGGGCCTGCCTGCCCGCATCGACGCAGCCTATG...GCCAGCACTAGCTCTCATCCCCCATCCGGGAGATACCACCAGTCCTGGTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGAAGGCTGGCAGCTGGGTaGCAGACACCCACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRRLAAG*QTPTLG
Trigger: CCCCAGGGTGGGTGTCTGGCACCCAGCTGCCAGCCT...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCGGGGGCAAGGCCCATaGAGGCTCAGTGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSRGQGP*RLSEQG
Trigger: CCCCTGCTCACTGAGCCTGCATGGGCCTTGCCCCCG...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGGTTTGGTGCCTGGTGTaGATGGCCGGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQVWCLV*MAGPRG
Trigger: CCCTCGGGGACCGGCCATCCACACCAGGCACCAAAC...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAATGTCCACGTCGTCCTaGGGCAGCCGCCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGQALGTPAGDSEGRASEMSTSS*GSRRSF
Trigger: GAAGGAGCGGCGGCTGCCCCAGGACGACGTGGACAT...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGAGGCCCTGGTGAGCACTaGCCAGAGCTGCCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRGPGEH*PELPLR
Trigger: TCTGAGGGGCAGCTCTGGCCAGTGCTCACCAGGGCC...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAGGGCTCCTCCTGGCATaGTCCCTGCCTCCGGATGGA +
Preference number: 4 (lower is better)
Translates to: AGQALGTPAGDSEGRASEGLLLA*SLPPDG
Trigger: TCCATCCGGAGGCAGGGACCATGCCAGGAGGAGCCC...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCTGGGGGAGGGGCAGAGCTCAGCTACTaGGGTGTCTGGGCGCTAGAG +
Preference number: 4 (lower is better)
Translates to: LGARVALAAPWSLSPGGGAELSY*GVWALE
Trigger: CTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGC...CCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AGGGGACCAGGACTGGTGGTATCTCCCGGATGGGGGATGAGAGCTAGTGCTGGCCTCAGTGAGCAGGGGTaGCATCCGAGACCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGPGLVVSPGWGMRASAGLSEQG*HPRPGQ
Trigger: CTGGCCGGGTCTCGGATGCCACCCCTGCTCACTGAG...GCCAGCACTAGCTCTCATCCCCCATCCGGGAGATACCACCAGTCCTGGTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCTGCAAGGCCTTCGCTaGGTGCAGCGCAGATGCCCG +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSLQGLR*VQRRCP
Trigger: CGGGCATCTGCGCTGCACTCAGCGAAGGCCTTGCAG...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCCACGGGGCAAACAGCTaGCCAGCTCCCCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAHGANS*PAPPGC
Trigger: ACAGCCTGGGGGAGCTGGGCAGCTGTTTGCCCCGTG...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGTCCTGGCATGGTCCCTaGCTCCGGATGGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSSWHGP*LRMEPG
Trigger: GCCAGGCTCCATCCGGAGGCAGGGACCATGCCAGGA...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCAGAGGGATCTGCCGTCTaGCAGCAGGGAAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSEGSAV*QQGNPG
Trigger: GCCTGGGTTTCCCTGCTGGCAGACGGCAGATCCCTC...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGAGCTGGGCCACAGCCCTaGCTGCAGCATGTGACCCTA +
Preference number: 4 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRAGPQP*LQHVTL
Trigger: TAGGGTCACATGCTGCAGGCAGGGCTGTGGCCCAGC...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGAGGGGGAGGGCCGCTATaGTGGCCTCATCACCAAGAC +
Preference number: 4 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRGGGPL*WPHHQD
Trigger: GTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCC...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGAGGACTCCCAGGCTCTaGCAGTGTTGGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQRTPRL*QCWPCS
Trigger: GCTGCAGGGCCAACACTGGCAGAGCCTGGGAGTCCT...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGGGGCCCCCAGTGCTTTaGCCCTCTGTCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSGPPVL*PSVCPV
Trigger: GACAGGGCAGACAGAGGGGCAAAGCACTGGGGGCCC...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCAGCTCCCCCAGGCTGTaGGGGTACCCAGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCSSPRL*GYPGST
Trigger: GGTGGAGCCTGGGTACCCCCACAGCCTGGGGGAGCT...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AGGGGACCAGGACTGGTGGTATCTCCCGGATGGGGGATGAGAGCTAGTGCTGGCCCCAGGACAGAAGGCTaGCAGCTGGGTGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: RGPGLVVSPGWGMRASAGPRTEG*QLGARH
Trigger: GTGTCTGGCACCCAGCTGCCAGCCTTCTGTCCTGGG...GCCAGCACTAGCTCTCATCCCCCATCCGGGAGATACCACCAGTCCTGGTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCTGGGGGAGGGGGTTCCAGCCAGGAGTaGAGCTGTGGTACCTCATGG +
Preference number: 4 (lower is better)
Translates to: LGARVALAAPWSLSPGGGGSSQE*SCGTSW
Trigger: CCATGAGGTACCACAGCTCCACTCCTGGCTGGAACC...CCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGCGGCTTAAGTGGGGGTaGTCAGGGACACCACATCGG +
Preference number: 4 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQRLKWG*SGTPHR
Trigger: CCGATGTGGTGTCCCTGATCACCCCCACTTAAGCCG...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGTTTCCTCTCCGATGGTaGGTGGATCCTGCGGACGGG +
Preference number: 4 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGFPLRW*VDPADG
Trigger: CCCGTCCGCAGGATCCACTCACCATCGGAGAGGAAA...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGGTGGAGCAGGTTTCCTaGGGGATCTGCCGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQVEQVS*GICRLP
Trigger: TGGCAGACGGCAGATCCCTCAGGAAACCTGCTCCAC...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGGTGAGAGCACCAACCTaGGGAGTGGACAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQVRAPT*GVDRDQ
Trigger: CTGGTCCCTGTCCACTCCTCAGGTTGGTGCTCTCAC...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCAGACTTTAACCAGTTCTaGCCGGCGAAGGGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSDFNQF*PAKGAS
Trigger: GGAGGCGCCCTTCGCCGGGCAGAACTGGTTAAAGTC...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCGGCCCTTTCATAGGCTaGGTCGATGCGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAGPFIG*VDAGRQ
Trigger: CTGCCTGCCCGCATCGACGCAGCCTATGAAAGGGCC...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGATGGACACCACAGGATaGCGTGACCACAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGMDTTG*RDHRGS
Trigger: GGAGCCCCTGTGGTCACGGCATCCTGTGGTGTCCAT...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGAGTGACAAGCAGGGCTaGCTCCGCCGTACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQSDKQG*LRRTVE
Trigger: CTCCACAGTACGGCGGAGGCAGCCCTGCTTGTCACT...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGTCCGCAGTTGTTCCCTaGCTGTCCCAGGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSSAVVP*LSQGAC
Trigger: GCAGGCTCCCTGGGACAGGCAGGGAACAACTGCGGA...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCATCCTTGGGGAGCCTGTaGGATGCCCTTCCACACGGT +
Preference number: 4 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSSLGSL*DALPHG
Trigger: ACCGTGTGGAAGGGCATCCCACAGGCTCCCCAAGGA...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAGTTGCGCGGGTAGCCTaGCTCCACGCTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AGQALGTPAGDSEGRASEVARVA*LHAQFL
Trigger: CAGAAACTGAGCGTGGAGCCAGGCTACCCGCGCAAC...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGACAGAAGGCTGGCAGCTaGGTGCCAGACACCCACCCT +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRQKAGS*VPDTHP
Trigger: AGGGTGGGTGTCTGGCACCCAGCTGCCAGCCTTCTG...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCTTGTCAGACCCAGCTaGGCCACAGCCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSLVRPS*ATALPA
Trigger: TGCAGGCAGGGCTGTGGCCCAGCTGGGTCTGACAAG...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCAACCCGGCCAGCACGCTaGAGACTGCCTGACACCTTT +
Preference number: 4 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSTRPAR*RLPDTF
Trigger: AAAGGTGTCAGGCAGTCTCCAGCGTGCTGGCCGGGT...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGGCCGCTTATAGTAGGTaGCAGGCTGAGGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGAAYSR*QAEGLS
Trigger: AGACAGGCCCTCAGCCTGTCACCTACTATAAGCGGC...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCGTGGAGACTGCCGACTaGAAGGCCTTCGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAVETAD*KAFAEC
Trigger: GCACTCAGCGAAGGCCTTGCAGTCGGCAGTCTCCAC...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp AGGGGACCAGGACTGGTGGTATCTCCCGGATGGGGGATGAGAGCTAGTGCTGGCCCTGCACTCGGTTATTaGGCAGACGCCAGAACCAGC +
Preference number: 4 (lower is better)
Translates to: RGPGLVVSPGWGMRASAGPALGY*ADARTS
Trigger: GCTGGTTCTGGCGTCTGCGCAATAACCGAGTGCAGG...GCCAGCACTAGCTCTCATCCCCCATCCGGGAGATACCACCAGTCCTGGTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCTGGGGGAGGGCACACATCGAAAGCCTaGCGAATAGCTTTCCGCGTG +
Preference number: 4 (lower is better)
Translates to: LGARVALAAPWSLSPGGGHTSKA*RIAFRV
Trigger: CACGCGGAAAGCTATTCGCCAGGCTTTCGATGTGTG...CCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGACTCTCCGATGGTGAGTaGATCCTGCGGACGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRLSDGE*ILRTGS
Trigger: ACTCCCCGTCCGCAGGATCCACTCACCATCGGAGAG...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AGGGGTGTCCTTCTAAGAGCAGTGTGGGAAGATGGGCCCAGTGAGCGAGGTCAGGGGGACCAGGACTGGTaGTATCTCCCGGATGGGGGA +
Preference number: 4 (lower is better)
Translates to: RGVLLRAVWEDGPSERGQGDQDW*YLPDGG
Trigger: TCCCCCATCCGGGAGATACCACCAGTCCTGGTCCCC...CTGACCTCGCTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAGGACACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAGGAGGGCCGCTATGCTaGCCTCATCACCAAGACAGT +
Preference number: 4 (lower is better)
Translates to: AGQALGTPAGDSEGRASEGGPLC*PHHQDS
Trigger: ACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCC...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGAGCCTTAGCAGCACCTTaGTCCTTGTCGCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRALAAP*SLSPGG
Trigger: TCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGC...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGAGCACTTCAGACGCCCTaGTCCCCTTCCGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRALQTP*SPSEGL
Trigger: GAGTCCTTCGGAAGGGGACCAGGGCGTCTGAAGTGC...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCACAGCGGACCCACATaGGCACCTCTGGGACAAGAG +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSHSGPT*APLGQE
Trigger: CTCTTGTCCCAGAGGTGCCCATGTGGGTCCGCTGTG...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGAAGAGGGGTCCACAGATaGGGACACAAGACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRRGVHR*GHKTQP
Trigger: TGGCTGGGTCTTGTGTCCCCATCTGTGGACCCCTCT...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGCGCAGATGCCCGTaGGTCATAGGGAAGCAGATA +
Preference number: 4 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRQRRCP*VIGKQI
Trigger: TATCTGCTTCCCTATGACTCACGGGCATCTGCGCTG...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCAGATCCAACACACCGGTaGCCGGGATCCCGTAAAACT +
Preference number: 4 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSDPTHR*PGSRKT
Trigger: AGTTTTACGGGATCCCGGTCACCGGTGTGTTGGATC...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACACTCGATCGTTGTCTaGTCCAACACACCGGTGACC +
Preference number: 4 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRHSIVV*SNTPVT
Trigger: GGTCACCGGTGTGTTGGATCAGACAACGATCGAGTG...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCACAGGATGCAGGGGATaGCCACGGCCACGGCGTTCA +
Preference number: 4 (lower is better)
Translates to: HLTGEAELQAASDRLEQSTGCRG*PRPRRS
Trigger: TGAACGCCGTGGCCGTGGTCATCCCCTGCATCCTGT...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp GCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAGCTCCCGGATGGGGGATaGGAGCTAGTGCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AESQWALMNPLALSRAPQLPDGG*ELVLAS
Trigger: GGAAGCCAGCACTAGCTCTCATCCCCCATCCGGGAG...CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp AGGGGACCAGGACTGGTGGTATCTCCCGGATGGGGGATGAGAGCTAGTGCTGGCTTCCAGCCGAGAGATTaGGTCGGCCTCAGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: RGPGLVVSPGWGMRASAGFQPRD*VGLRVA
Trigger: AGCTACTCTGAGGCCGACTCAATCTCTCGGCTGGAA...GCCAGCACTAGCTCTCATCCCCCATCCGGGAGATACCACCAGTCCTGGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCAAGGCCTTCGCTGAGTaGAGCGCAGATGCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCKAFAE*SADARE
Trigger: CTCACGGGCATCTGCGCTGCACTCAGCGAAGGCCTT...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCAAGATGTTGGGTTTGGTaGCTGGTGTGGATGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSRCWVW*LVWMAG
Trigger: ACCGGCCATCCACACCAGGCACCAAACCCAACATCT...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCACCTCCTTCTGGTTaGAGCCCATCCAGTCACGCA +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSPPPSG*SPSSHA
Trigger: TGCGTGACTGGATGGGCTGCAACCAGAAGGAGGTGG...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCACTCAGCCTAGGCCAATaGACCCACCACTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSLSLGQ*THHFSC
Trigger: ACAGCTGAAGTGGTGGGTGCATTGGCCTAGGCTGAG...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp AGGGGTGTCCTTCTAAGAGCAGTGTGGGAAGATGGGCCCAGTGAGCGAGGTCAGGCTTCCCACAGAGGGTaGTGGGTTCCAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RGVLLRAVWEDGPSERGQASHRG*WVPARS
Trigger: ACTCCTGGCTGGAACCCAGCACCCTCTGTGGGAAGC...CTGACCTCGCTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAGGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCGCAGCCTGGGCTGCCTaGCTCCATCTCCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAAAWAA*LHLLFI
Trigger: AATGAACAGGAGATGGAGGCAGGCAGCCCAGGCTGC...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGACTCCAGAGGCTCGGCTaGGGGTCCATAGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRLQRLG*GSIDLL
Trigger: CAGAAGATCTATGGACCCCCAGCCGAGCCTCTGGAG...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCGTTGGGTTTGGTGCCTaGTGTGGATGGCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: HLTGEAELQAASDRLEQSVGFGA*CGWPVP
Trigger: GGGGACCGGCCATCCACACCAGGCACCAAACCCAAC...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACACAGATGTTGGGTTTaGTGCCTGGTGTGGATGGCC +
Preference number: 4 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRHRCWV*CLVWMA
Trigger: GGCCATCCACACCAGGCACCAAACCCAACATCTGTG...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGACGCTCCACCTCCTTCTaGTTGCAGCCCATCCAGTCA +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRRSTSF*LQPIQS
Trigger: TGACTGGATGGGCTGCAACCAGAAGGAGGTGGAGCG...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AGGGGTGTCCTTCTAAGAGCAGTGTGGGAAGATGGGCCCAGTGAGCGAGGTCAGGTCCCTGCCTCCGGATaGAGCCTGGCCTATTCCCTT +
Preference number: 4 (lower is better)
Translates to: RGVLLRAVWEDGPSERGQVPASG*SLAYSL
Trigger: AAGGGAATAGGCCAGGCTCCATCCGGAGGCAGGGAC...CTGACCTCGCTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAGGACACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAACTGACCAGCAGGTGTTaGCAAAAGGGGACCAGGACT +
Preference number: 4 (lower is better)
Translates to: AGQALGTPAGDSEGRASELTSRC*QKGTRT
Trigger: AGTCCTGGTCCCCTTTTGCCAACACCTGCTGGTCAG...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGATCACGATGTGACAGCTaGGTCCTTGTCAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRSRCDS*VLVRPS
Trigger: GCTGGGTCTGACAAGGACCCAGCTGTCACATCGTGA...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAGCAAGGGCCAAGCTCTaGGAAAACACTGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGQALGTPAGDSEGRASEARAKL*ENTASS
Trigger: GCTGGAAGCAGTGTTTTCCCAGAGCTTGGCCCTTGC...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CAA 72 bp AGCGGACCCACATGGGCACCTCTGGGACAAGAGATTTaGCTTGAGACAGCTCCCAGGGCAGCAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SGPTWAPLGQEI*LETAPRAAGVP
Trigger: AGGGACTCCTGCTGCCCTGGGAGCTGTCTCAAGCAAAATCTCTTGTCCCAGAGGTGCCCATGTGGGTCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGCACCACAGGATGCCGTaGCCACAGGGGCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLHHRMP*PQGLLL
Trigger: CAGGAGGAGCCCCTGTGGTCACGGCATCCTGTGGTG...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGTCTCCGAAGAGACCCTaGCAAGTGGAGCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSSPKRP*QVEQVS
Trigger: GGAAACCTGCTCCACTTGTCAGGGTCTCTTCGGAGA...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGACGCTGGAGACTGCCTaGCACCTTTTTGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSTLETA*HLFGFG
Trigger: GCCAAAGCCAAAAAGGTGTCAGGCAGTCTCCAGCGT...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACATAGATCTTCTGGATaGCCTGGAGATCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRHRSSG*PGDRPG
Trigger: CCCAGGACGATCTCCAGGGCATCCAGAAGATCTATG...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAAATGGGGTCAGCTTCTaGCCCAGCTCTGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: AGQALGTPAGDSEGRASENGVSF*PSSVAI
Trigger: TATGGCTACAGAGCTGGGGCAGAAGCTGACCCCATT...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGCAGCACGCTGGAGACTaGCTGACACCTTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGQHAGD*LTPFWL
Trigger: AAGCCAAAAAGGTGTCAGGCAGTCTCCAGCGTGCTG...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCGGCGGGAGGCGGGGGTaGCTAGAGCTTTCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: HLTGEAELQAASDRLEQSGGRRG*LELSRS
Trigger: ACTTCTTGAAAGCTCTAGGCACCCCCGCCTCCCGCC...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AGACAGTCACCTCTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATGGGACGCGGCCGAGGGGGCCTaGGCTGGCGCTCGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RQSPLVHLKPQAAFAKWDAAEGA*AGARVS
Trigger: GGAAACACGAGCGCCAGCCCAGGCCCCCTCGGCCGC...GTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAGAGGTGACTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCGCTGGCCAGACCAAGTaGATAGAGAGGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HLTGEAELQAASDRLEQSAGQTK*IERALG
Trigger: GCCCAGAGCCCTCTCTATCCACTTGGTCTGGCCAGC...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCTCCGGATGGAGCCTaGCCTATTCCCTTAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSPPDGA*PIPLSR
Trigger: CCTACTTAAGGGAATAGGCCAGGCTCCATCCGGAGG...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCCCAGGAGTGGAGCTGTaGTACCTCATGGACACCACA +
Preference number: 4 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAPGVEL*YLMDTT
Trigger: TGTGGTGTCCATGAGGTACCACAGCTCCACTCCTGG...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGGTGGTATCTCCCGGATaGGGGATGAGAGCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSVVSPG*GMRASA
Trigger: AGCACTAGCTCTCATCCCCCATCCGGGAGATACCAC...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCAGACAATAGAGGGGAGTaGAGGACGGTCACAAACTCG +
Preference number: 4 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSDNRGE*RTVTNS
Trigger: CGAGTTTGTGACCGTCCTCCACTCCCCTCTATTGTC...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGCTTCTAAGAGCAGTGTaGGAAGATGGGCCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGLLRAV*EDGPSE
Trigger: CTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAG...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGGGGGAAGCTAGGCTCTaGGGCCCCCAGTGCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLGEARL*GPQCFA
Trigger: GGCAAAGCACTGGGGGCCCCAGAGCCTAGCTTCCCC...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGAGAGCTTTCAAGAAGTaGGAGCACCAACCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQRAFKK*EHQPEE
Trigger: CTCCTCAGGTTGGTGCTCTCACTTCTTGAAAGCTCT...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGAACAGGCAGGAGAATCTaGGATTGGAAGCCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRTGRRI*DWKPLG
Trigger: GCCTAGAGGCTTCCAATCTCAGATTCTCCTGCCTGT...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCGCAGAGCTGTGTCAATaGCTTCACGGGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCAELCQ*LHGANS
Trigger: GCTGTTTGCCCCGTGAAGGCATTGACACAGCTCTGC...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp ACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGCCCCAGCTCTGTAGCCATTGCCAGTGTTGGCCCTaGAGCCATCTCTGCCTCACC +
Preference number: 4 (lower is better)
Translates to: TRIFLQKWGQLLPQLCSHCQCWP*SHLCLT
Trigger: GGTGAGGCAGAGATGGCTGCAGGGCCAACACTGGCA...ATGGCTACAGAGCTGGGGCAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCGTTCCCGTCATGGTTaGCATTTCCTAGCGTCCATG +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSRSRHG*HFLASM
Trigger: CATGGACGCTAGGAAATGCCAACCATGACGGGAACG...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGGGGGAGTGTAGGGAGTaGCCTTGTGGGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLGECRE*PCGLQR
Trigger: CCTCTGGAGCCCACAAGGCCACTCCCTACACTCCCC...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAGACTGCTCGATCTGCATaGGGTAGCCCTCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: AESQWALMNPLALSRAPQTARSA*GSPPAL
Trigger: GAGTGCAGGAGGGCTACCCCATGCAGATCGAGCAGT...CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCAAAGGGGACCAGGACTaGTGGTATCTCCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: HLTGEAELQAASDRLEQSKGDQD*WYLPDG
Trigger: CCCATCCGGGAGATACCACCAGTCCTGGTCCCCTTT...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGTTGGTCCTTGTCGCCTaGGGGAGGGCCGCTATGCTG +
Preference number: 4 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLLVLVA*GRAAML
Trigger: CAGCATAGCGGCCCTCCCCCAGGCGACAAGGACCAA...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAGCGGCCTCAGAGTAGCTaGAGTCGGCCTCAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: AESQWALMNPLALSRAPQRPQSS*SRPQSS
Trigger: ACTACTCTGAGGCCGACTCCAGCTACTCTGAGGCCG...CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGTGCCTGACACCTTTTTaGCTTTGGCAGAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGCLTPF*LWQRAS
Trigger: ACTGGCTCTCTGCCAAAGCCAAAAAGGTGTCAGGCA...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGAGAGGCCAGGAAGAGGTaGATACAGGAGACACTTCTC +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQREARKR*IQETLL
Trigger: GAGAAGTGTCTCCTGTATCCACCTCTTCCTGGCCTC...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCCCTTCCGGTCACTTTTaGTCTCATGGTATGGCACCT +
Preference number: 4 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAPSGHF*SHGMAP
Trigger: AGGTGCCATACCATGAGATCAAAAGTGACCGGAAGG...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGAAGTACCGCTCGCCTTTaGAAAAGTAGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRSTARL*KSRSCP
Trigger: TGGGCAAGACCTACTTTTTCAAAGGCGAGCGGTACT...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCACAAGAGATTTTGCTTaGGACAGCTCCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCTRDFA*DSSQGS
Trigger: GCTGCCCTGGGAGCTGTCTCAAGCAAAATCTCTTGT...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp GCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAGAGTGGGGTCACCTTCTaGCACACATCGAAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AESQWALMNPLALSRAPQSGVTF*HTSKAW
Trigger: CCAGGCTTTCGATGTGTGGCAGAAGGTGACCCCACT...CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGATGGGACAAGAGATTTTaGTTGAGACAGCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRWDKRF*LRQLPG
Trigger: CCCTGGGAGCTGTCTCAAGCAAAATCTCTTGTCCCA...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCTGGGGGAGGGTTTGATCTCATGGTATaGCACCTCTTCAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LGARVALAAPWSLSPGGGFDLMV*HLFKGQ
Trigger: CTGACCTTTGAAGAGGTGCCATACCATGAGATCAAA...CCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AGGGGTGTCCTTCTAAGAGCAGTGTGGGAAGATGGGCCCAGTGAGCGAGGTCAGAGGTCGTTCCCGTCATaGTTGGCATTTCCTAGCGTC +
Preference number: 4 (lower is better)
Translates to: RGVLLRAVWEDGPSERGQRSFPS*LAFPSV
Trigger: GACGCTAGGAAATGCCAACCATGACGGGAACGACCT...CTGACCTCGCTCACTGGGCCCATCTTCCCACACTGCTCTTAGAAGGACACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AGACAGTCACCTCTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATGGGACCGAGGGGGCCTGGGCTaGCGCTCGTGTTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RQSPLVHLKPQAAFAKWDRGGLG*RSCFLS
Trigger: GGAGAGGAAACACGAGCGCCAGCCCAGGCCCCCTCG...GTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAGAGGTGACTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCCACCCATTCCTGGACTaGCCGCTTATAGTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCHPFLD*PLIVGD
Trigger: GTCACCTACTATAAGCGGCCAGTCCAGGAATGGGTG...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp ACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGCCCCAGCTCTGTAGCCATGAGGAAGGGCCTGGCTaGCCAGACCAAGTGGATAGA +
Preference number: 4 (lower is better)
Translates to: TRIFLQKWGQLLPQLCSHEEGPG*PDQVDR
Trigger: TCTATCCACTTGGTCTGGCCAGCCAGGCCCTTCCTC...ATGGCTACAGAGCTGGGGCAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCCTGCAAGTGACAGACTaGAGCAAAGCTGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCLQVTD*SKAGDS
Trigger: ACTGTCCCCAGCTTTGCTCCAGTCTGTCACTTGCAG...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGACACCTTTTTGGCTTTaGCAGAGAGCCAGTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSTPFWL*QRASGH
Trigger: ATGCCCACTGGCTCTCTGCCAAAGCCAAAAAGGTGT...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCACATGGGCACCTCTaGGACAAGAGATTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LLGCLGARVALAAPWSLSPHGHL*DKRFCL
Trigger: CAAGCAAAATCTCTTGTCCCAGAGGTGCCCATGTGG...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp CGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGTGAATGCTGTAGGTaGTGTGTTTTTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: RRTVEQGRPSPRNSCWRQCECCR*CVFAST
Trigger: AGTGGAGGCAAAAACACATCACCTACAGCATTCACA...CTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGCGTCCTGGGGCAGCTTaGAGTTGTGCGTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLRPGAA*SCASPC
Trigger: ACATGGAGACGCACAACTTCAAGCTGCCCCAGGACG...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGGCTCCAGGCTGCAAGTaGCAGACTGGAGCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLAPGCK*QTGAKL
Trigger: CAGCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGC...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGCTGCATAGTGGAGACTaGCGACTGCAAGGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLLHSGD*RLQGLR
Trigger: GCGAAGGCCTTGCAGTCGGCAGTCTCCACTATGCAG...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAGAGAGACCCTGACAAGTaGAGCAGGTTTCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AESQWALMNPLALSRAPQRDPDK*SRFPEG
Trigger: TCCCTCAGGAAACCTGCTCCACTTGTCAGGGTCTCT...CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp GCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAGTGTGACCCTAAATCCTaGGTCTCCGAAGAGACCCTG +
Preference number: 4 (lower is better)
Translates to: AESQWALMNPLALSRAPQCDPKS*VSEETL
Trigger: CAGGGTCTCTTCGGAGACCCAGGATTTAGGGTCACA...CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCCTGTCTGCCCTGTCCTaGGGTGATGGACAAACAGAT +
Preference number: 4 (lower is better)
Translates to: HLTGEAELQAASDRLEQSLSALS*GDGQTD
Trigger: ATCTGTTTGTCCATCACCCCAGGACAGGGCAGACAG...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CAA 72 bp CCAGCACGCTGGAGACTGCCTGACACCTTTTTGGCTTaGGCAGAGAGCCAGTGGGCATTGATGAACCCATTG +
Preference number: 4 (lower is better)
Translates to: PARWRLPDTFLA*AESQWALMNPL
Trigger: CAATGGGTTCATCAATGCCCACTGGCTCTCTGCCAAAGCCAAAAAGGTGTCAGGCAGTCTCCAGCGTGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp AGACAGTCACCTCTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATGGGACAGCACTGGCCAGAGCTaGCCCTCAGACCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: RQSPLVHLKPQAAFAKWDSTGQS*PSDPGE
Trigger: CTCACCAGGGTCTGAGGGGCAGCTCTGGCCAGTGCT...GTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAGAGGTGACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
3UTR CAA 72 bp GACACCTTTTTGGCTTTGGCAGAGAGCCAGTGGGCATaGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DTFLALAESQWA*MNPLALSRAPQ
Trigger: CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGCCAAAGCCAAAAAGGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp GCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAGGGCCTGTCTTGTTCTTaGACTGGAAGATGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: AESQWALMNPLALSRAPQGLSCS*TGRWCR
Trigger: TCTACACCATCTTCCAGTTCAAGAACAAGACAGGCC...CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp CACCTAACTGGTGAGGCTGAGCTCCAGGCTGCAAGTGACAGACTGGAGCAAAGCGCAGCCTTTGCAAAATaGGACAGTAGTGACAGGACA +
Preference number: 4 (lower is better)
Translates to: HLTGEAELQAASDRLEQSAAFAK*DSSDRT
Trigger: TGTCCTGTCACTACTGTCCCATTTTGCAAAGGCTGC...GCTTTGCTCCAGTCTGTCACTTGCAGCCTGGAGCTCAGCCTCACCAGTTAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCAAATACTTGTCACCTTTaGAGAAGACAAATCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSNTCHL*RRQISH
Trigger: ATGGGAGATTTGTCTTCTTCAAAGGTGACAAGTATT...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp AGACAGTCACCTCTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATGGGACAGGAGTCCCTGTCTGTaGTACAGGGTAAGCCGACCC +
Preference number: 4 (lower is better)
Translates to: RQSPLVHLKPQAAFAKWDRSPCL*YRVSRP
Trigger: GGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCT...GTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAGAGGTGACTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCGATCAGTTTAAAATGTaGCTGACACTGAAATGCTGT +
Preference number: 4 (lower is better)
Translates to: CSHRSRAQLLGCLGARVADQFKM*LTLKCC
Trigger: ACAGCATTTCAGTGTCAGTCACATTTTAAACTGATC...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CCA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCTCACTTTTGATCTCATaGTATGGCACCTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCSLLIS*YGTSSK
Trigger: CTTTGAAGAGGTGCCATACCATGAGATCAAAAGTGA...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR TCA 90 bp AGACAGTCACCTCTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATGGGACGTGAGTGGACAGGTGTaGGCTAATAAAGTGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RQSPLVHLKPQAAFAKWDVSGQV*ANKVLC
Trigger: GCAAAGCACTTTATTAGCTCACACCTGTCCACTCAC...GTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAGAGGTGACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR GCA 90 bp AGACAGTCACCTCTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATGGGACAAAGATCATGATGTCTaGCTCCTTCCGGTCACTTTT +
Preference number: 4 (lower is better)
Translates to: RQSPLVHLKPQAAFAKWDKDHDV*LLPVTF
Trigger: AAAAGTGACCGGAAGGAGGCAGACATCATGATCTTT...GTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAGAGGTGACTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS TCA 90 bp CGGCCGAGGGGGCCTGGGCTGGCGCTCGTGTTTCCTCTCCGATGGTaGGTGGATCCTGCGGACGGGGAGTGTAGGGAGTGGCCTTGTGGG +
Preference number: 5 (lower is better)
Translates to: RPRGPGLALVFPLRW*VDPADGECREWPCG
Trigger: CCCACAAGGCCACTCCCTACACTCCCCGTCCGCAGGATCCACTCACCATCGGAGAGGAAACACGAGCGCCAGCCCAGGCCCCCTCGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS GCA 90 bp CCTGGGGCAGCCGCCGCTCCTTCCGCCGCTCCACCTCCTTCTGGTTaGAGCCCATCCAGTCACGCAGGATGTTGCGCGGGTAGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PGAAAAPSAAPPPSG*SPSSHAGCCAGSLA
Trigger: AGCCAGGCTACCCGCGCAACATCCTGCGTGACTGGATGGGCTGCAACCAGAAGGAGGTGGAGCGGCGGAAGGAGCGGCGGCTGCCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CCA 90 bp CGAGGGGGCCTGGGCTGGCGCTCGTGTTTCCTCTCCGATGGTGAGTaGATCCTGCGGACGGGGAGTGTAGGGAGTGGCCTTGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RGGLGWRSCFLSDGE*ILRTGSVGSGLVGS
Trigger: GGAGCCCACAAGGCCACTCCCTACACTCCCCGTCCGCAGGATCCACTCACCATCGGAGAGGAAACACGAGCGCCAGCCCAGGCCCCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CCA 90 bp GAGCCCGGCACATCGTTGATGGTCACCATGATGTCCACGTCGTCCTaGGGCAGCCGCCGCTCCTTCCGCCGCTCCACCTCCTTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: EPGTSLMVTMMSTSS*GSRRSFRRSTSFWL
Trigger: CAACCAGAAGGAGGTGGAGCGGCGGAAGGAGCGGCGGCTGCCCCAGGACGACGTGGACATCATGGTGACCATCAACGATGTGCCGGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCGGGAGCCCCCTCAGCTaGGGGCTGCTACCGGTAGGG +
Preference number: 5 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCGSPLS*GLLPVG
Trigger: CCCTACCGGTAGCAGCCCCAAGCTGAGGGGGCTCCC...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp AGGGGACCAGGACTGGTGGTATCTCCCGGATGGGGGATGAGAGCTAGTGCTGGCGCTGATGAAGGCTCCTaGGGGAGCCTGTGGGATGCC +
Preference number: 5 (lower is better)
Translates to: RGPGLVVSPGWGMRASAGADEGS*GSLWDA
Trigger: GGCATCCCACAGGCTCCCCAAGGAGCCTTCATCAGC...GCCAGCACTAGCTCTCATCCCCCATCCGGGAGATACCACCAGTCCTGGTCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp AAGATGGGCCCAGTGAGCGAGGTCAGCAAGGGCCAAGCTCTGGGAAAACACTGCGGCCTTAGCAGCACCTaGGTCCTTGTCGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: KMGPVSEVSKGQALGKHCGLSST*VLVAWG
Trigger: CCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCC...GCAGTGTTTTCCCAGAGCTTGGCCCTTGCTGACCTCGCTCACTGGGCCCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGTCCACCTCCTTCTGGTaGCAGCCCATCCAGTCACGC +
Preference number: 5 (lower is better)
Translates to: LLGCLGARVALAAPWSLSSTSFW*QPIQSR
Trigger: GCGTGACTGGATGGGCTGCAACCAGAAGGAGGTGGA...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAGAGCCCGGCACATCGTaGATGGTCACCATGATGTCC +
Preference number: 5 (lower is better)
Translates to: AGQALGTPAGDSEGRASEEPGTS*MVTMMS
Trigger: GGACATCATGGTGACCATCAACGATGTGCCGGGCTC...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCATCTGACCAGCAGGTGTaGGCAAAAGGGGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSSDQQV*AKGDQD
Trigger: GTCCTGGTCCCCTTTTGCCAACACCTGCTGGTCAGA...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp CTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCTGGGGGAGGGCAGGGAAACCCAGGCTaGTTGCTCACTGTGTCAGAA +
Preference number: 5 (lower is better)
Translates to: LGARVALAAPWSLSPGGGQGNPG*LLTVSE
Trigger: TTCTGACACAGTGAGCAACAAGCCTGGGTTTCCCTG...CCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp CTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCCTGGGGGAGGGTCCTTCCGGTCACTTTaGATCTCATGGTATGGCACC +
Preference number: 5 (lower is better)
Translates to: LGARVALAAPWSLSPGGGSFRSL*ISWYGT
Trigger: GGTGCCATACCATGAGATCAAAAGTGACCGGAAGGA...CCCTCCCCCAGGCGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp AGGGGACCAGGACTGGTGGTATCTCCCGGATGGGGGATGAGAGCTAGTGCTGGCTGGGGCAGCTTGAAGTaGTGCGTCTCCATGTACTGG +
Preference number: 5 (lower is better)
Translates to: RGPGLVVSPGWGMRASAGWGSLK*CVSMYW
Trigger: CCAGTACATGGAGACGCACAACTTCAAGCTGCCCCA...GCCAGCACTAGCTCTCATCCCCCATCCGGGAGATACCACCAGTCCTGGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAAGAGAGCCAGTGGGCATaGATGAACCCATTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: AGQALGTPAGDSEGRASEESQWA*MNPLAL
Trigger: CAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTC...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAACTGCCTGACACCTTTTaGGCTTTGGCAGAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: AGQALGTPAGDSEGRASELPDTF*ALAESQ
Trigger: CTGGCTCTCTGCCAAAGCCAAAAAGGTGTCAGGCAG...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp GTCCTTGTCGCCTGGGGGAGGGCCGCTATGCTGGCCTCATCACCAAGACAGTCATCATCCACTCGATCGTaGTCTGATCCAACACACCGG +
Preference number: 5 (lower is better)
Translates to: VLVAWGRAAMLASSPRQSSSTRS*SDPTHR
Trigger: CCGGTGTGTTGGATCAGACAACGATCGAGTGGATGA...TGACTGTCTTGGTGATGAGGCCAGCATAGCGGCCCTCCCCCAGGCGACAAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp AGGGGACCAGGACTGGTGGTATCTCCCGGATGGGGGATGAGAGCTAGTGCTGGCGACAAGAGATTTTGCTaGAGACAGCTCCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RGPGLVVSPGWGMRASAGDKRFC*RQLPGQ
Trigger: CTGCCCTGGGAGCTGTCTCAAGCAAAATCTCTTGTC...GCCAGCACTAGCTCTCATCCCCCATCCGGGAGATACCACCAGTCCTGGTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp CTACTGGGGTGTCTGGGCGCTAGAGTGGCCTTAGCAGCACCTTGGTCCTTGTCGCTAATATCTCCGCAGTaGTTCCCTGCCTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LLGCLGARVALAAPWSLSLISPQ*FPACPR
Trigger: CCTGGGACAGGCAGGGAACAACTGCGGAGATATTAG...CGACAAGGACCAAGGTGCTGCTAAGGCCACTCTAGCGCCCAGACACCCCAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGCAGGAGAATCTGAGATaGGAAGCCTCTAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGQENLR*EASRLS
Trigger: GCTCAGCCTAGAGGCTTCCAATCTCAGATTCTCCTG...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp GCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAGTCGTCCTGGGGCAGCTaGAAGTTGTGCGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: AESQWALMNPLALSRAPQSSWGS*KLCVSM
Trigger: CATGGAGACGCACAACTTCAAGCTGCCCCAGGACGA...CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp AGACAGTCACCTCTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATGGGACGCAGCACCTTGGTCCTaGTCGCCTGGGGGAGGGCCG +
Preference number: 5 (lower is better)
Translates to: RQSPLVHLKPQAAFAKWDAAPWS*SPGGGP
Trigger: CGGCCCTCCCCCAGGCGACAAGGACCAAGGTGCTGC...GTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAGAGGTGACTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCGCATTGATGAACCCATaGGCCTTGTCTAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: CSHRSRAQLLGCLGARVAALMNP*ALSRAP
Trigger: AGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGC...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp CTCCGCCGTACTGTGGAGCAAGGCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACTAGCTCACCCACTTTaGGGGTATAGTTGTGAATGC +
Preference number: 5 (lower is better)
Translates to: LRRTVEQGRPSPRNSCWRLAHPL*GYSCEC
Trigger: GCATTCACAACTATACCCCAAAAGTGGGTGAGCTAG...TCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGCCTTGCTCCACAGTACGGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp TGTAGCCATAGGAGCAGAGCTCAGCTACTGGGGTGTCTGGGCGCTAGAGTGGCCAGCCTCAAGCAGCCTTaGCAAAATGGGACAGTAGTG +
Preference number: 5 (lower is better)
Translates to: CSHRSRAQLLGCLGARVASLKQP*QNGTVV
Trigger: CACTACTGTCCCATTTTGCAAAGGCTGCTTGAGGCT...GGCCACTCTAGCGCCCAGACACCCCAGTAGCTGAGCTCTGCTCCTATGGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp GGCAGCAGGAGTCCCTGTCTGTGCTACAGGGTAAGCCGACCCCAATCCCAGAGAGTAGGTGATGTGTTTTaGCCTCCACTTCTGTCCAGT +
Preference number: 5 (lower is better)
Translates to: GSRSPCLCYRVSRPQSQRVGDVF*PPLLSS
Trigger: ACTGGACAGAAGTGGAGGCAAAAACACATCACCTAC...TCTCTGGGATTGGGGTCGGCTTACCCTGTAGCACAGACAGGGACTCCTGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp GCAGAGAGCCAGTGGGCATTGATGAACCCATTGGCCTTGTCTAGGGCTCCTCAGTCGTTCCCGTCATGGTaGGCATTTCCTAGCGTCCAT +
Preference number: 5 (lower is better)
Translates to: AESQWALMNPLALSRAPQSFPSW*AFPSVH
Trigger: ATGGACGCTAGGAAATGCCAACCATGACGGGAACGA...CTGAGGAGCCCTAGACAAGGCCAATGGGTTCATCAATGCCCACTGGCTCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGCTTCCAGCCGAGAGATaGAGTCGGCCTCAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLLPAER*SRPQSS
Trigger: GCTACTCTGAGGCCGACTCAATCTCTCGGCTGGAAG...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp AGTGGAGGACGGTCACAAACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGTCACAGATGTTGGGTTaGGTGCCTGGTGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: SGGRSQTRIFLQKWGQLLSQMLG*VPGVDG
Trigger: GCCATCCACACCAGGCACCAAACCCAACATCTGTGA...CAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGTTTGTGACCGTCCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp ACTCGGATCTTCCTCCAGAAATGGGGTCAGCTTCTGCCCCAGCTCTGTAGCCATCTGGGACAAGAGATTTaGCTTGAGACAGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TRIFLQKWGQLLPQLCSHLGQEI*LETAPR
Trigger: CCTGGGAGCTGTCTCAAGCAAAATCTCTTGTCCCAG...ATGGCTACAGAGCTGGGGCAGAAGCTGACCCCATTTCTGGAGGAAGATCCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp GCAGGCCAAGCCCTAGGAACTCCTGCTGGAGACAGTGAAGGGCGGGCCAGTGAACAATACTTGTCACCTTaGAAGAAGACAAATCTCCCA +
Preference number: 5 (lower is better)
Translates to: AGQALGTPAGDSEGRASEQYLSP*KKTNLP
Trigger: TGGGAGATTTGTCTTCTTCAAAGGTGACAAGTATTG...TTCACTGGCCCGCCCTTCACTGTCTCCAGCAGGAGTTCCTAGGGCTTGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp AGACAGTCACCTCTAGTTCACCTAAAGCCTCAAGCAGCCTTTGCAAAATGGGACTCCTGCACTCGGTTATaGCGCAGACGCCAGAACCAG +
Preference number: 5 (lower is better)
Translates to: RQSPLVHLKPQAAFAKWDSCTRL*RRRQNQ
Trigger: CTGGTTCTGGCGTCTGCGCAATAACCGAGTGCAGGA...GTCCCATTTTGCAAAGGCTGCTTGAGGCTTTAGGTGAACTAGAGGTGACTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS-3UTR CAA 90 bp CCTCTCTGTGCTTCATCTGAGGGCACGGTGAGAGTTACCGTCGGCCTCCCAGGGTTAAACACCCAATACTaGTCACCTTTGAAGAAGACA +
Preference number: 5 (lower is better)
Translates to: PLCASSEGTVRVTVGLPGLNTQY*SPLKKT
Trigger: TGTCTTCTTCAAAGGTGACAAGTATTGGGTGTTTAA...CCCTGGGAGGCCGACGGTAACTCTCACCGTGCCCTCAGATGAAGCACAGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CAA 90 bp CAGGGGATGACCACGGCCACGGCGTTCACGGAGCCCGGCACATCGTaGATGGTCACCATGATGTCCACGTCGTCCTGGGGCAGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: QGMTTATAFTEPGTS*MVTMMSTSSWGSRR
Trigger: GCGGCGGCTGCCCCAGGACGACGTGGACATCATGGTGACCATCAACGATGTGCCGGGCTCCGTGAACGCCGTGGCCGTGGTCATCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS GCA 72 bp GCCGCCGCTCCTTCCGCCGCTCCACCTCCTTCTGGTTaGAGCCCATCCAGTCACGCAGGATGTTGCGCGGGT +
Preference number: 6 (lower is better)
Translates to: AAAPSAAPPPSG*SPSSHAGCCAG
Trigger: ACCCGCGCAACATCCTGCGTGACTGGATGGGCTGCAACCAGAAGGAGGTGGAGCGGCGGAAGGAGCGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CAA 72 bp AGCCGCCGCTCCTTCCGCCGCTCCACCTCCTTCTGGTaGCAGCCCATCCAGTCACGCAGGATGTTGCGCGGG +
Preference number: 6 (lower is better)
Translates to: SRRSFRRSTSFW*QPIQSRRMLRG
Trigger: CCCGCGCAACATCCTGCGTGACTGGATGGGCTGCAACCAGAAGGAGGTGGAGCGGCGGAAGGAGCGGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS TCA 72 bp GGGCCTGGGCTGGCGCTCGTGTTTCCTCTCCGATGGTaGGTGGATCCTGCGGACGGGGAGTGTAGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: GPGLALVFPLRW*VDPADGECREW
Trigger: CCACTCCCTACACTCCCCGTCCGCAGGATCCACTCACCATCGGAGAGGAAACACGAGCGCCAGCCCAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS TCA 72 bp CCAGCACCAGGATGCAGAGGGACAGGATGCAGGGGATaGCCACGGCCACGGCGTTCACGGAGCCCGGCACAT +
Preference number: 6 (lower is better)
Translates to: PAPGCRGTGCRG*PRPRRSRSPAH
Trigger: ATGTGCCGGGCTCCGTGAACGCCGTGGCCGTGGTCATCCCCTGCATCCTGTCCCTCTGCATCCTGGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CCA 72 bp ACATCGTTGATGGTCACCATGATGTCCACGTCGTCCTaGGGCAGCCGCCGCTCCTTCCGCCGCTCCACCTCC +
Preference number: 6 (lower is better)
Translates to: TSLMVTMMSTSS*GSRRSFRRSTS
Trigger: GGAGGTGGAGCGGCGGAAGGAGCGGCGGCTGCCCCAGGACGACGTGGACATCATGGTGACCATCAACGATGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CAA 72 bp ACCACGGCCACGGCGTTCACGGAGCCCGGCACATCGTaGATGGTCACCATGATGTCCACGTCGTCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: TTATAFTEPGTS*MVTMMSTSSWG
Trigger: GCCCCAGGACGACGTGGACATCATGGTGACCATCAACGATGTGCCGGGCTCCGTGAACGCCGTGGCCGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CCA 72 bp CTGGGCTGGCGCTCGTGTTTCCTCTCCGATGGTGAGTaGATCCTGCGGACGGGGAGTGTAGGGAGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: LGWRSCFLSDGE*ILRTGSVGSGL
Trigger: AAGGCCACTCCCTACACTCCCCGTCCGCAGGATCCACTCACCATCGGAGAGGAAACACGAGCGCCAGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS GCA 72 bp TCTTGCCCACAGGTTCCCAGCGCAGAGCTGTGTCAATaGCTTCACGGGGCAAACAGCTGCCCAGCTCCCCCA +
Preference number: 6 (lower is better)
Translates to: SCPQVPSAELCQ*LHGANSCPAPP
Trigger: TGGGGGAGCTGGGCAGCTGTTTGCCCCGTGAAGGCATTGACACAGCTCTGCGCTGGGAACCTGTGGGCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CCA 72 bp ACCCTGGTGAGGAAGGGCCTGGCTGGCCAGACCAAGTaGATAGAGAGGGCTCTGGGCTGCTCACACCCATTC +
Preference number: 6 (lower is better)
Translates to: TLVRKGLAGQTK*IERALGCSHPF
Trigger: GAATGGGTGTGAGCAGCCCAGAGCCCTCTCTATCCACTTGGTCTGGCCAGCCAGGCCCTTCCTCACCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CCA 72 bp TCCTTCCTTGCTGATGAAGGCTCCTTGGGGAGCCTGTaGGATGCCCTTCCACACGGTGATGGGCTTAGGGTA +
Preference number: 6 (lower is better)
Translates to: SFLADEGSLGSL*DALPHGDGLRV
Trigger: TACCCTAAGCCCATCACCGTGTGGAAGGGCATCCCACAGGCTCCCCAAGGAGCCTTCATCAGCAAGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CAA 90 bp CTTGTAGAAATAGGTGTAATATCCTTCCTTGCTGATGAAGGCTCCTaGGGGAGCCTGTGGGATGCCCTTCCACACGGTGATGGGCTTAGG +
Preference number: 6 (lower is better)
Translates to: LVEIGVISFLADEGS*GSLWDALPHGDGLR
Trigger: CCTAAGCCCATCACCGTGTGGAAGGGCATCCCACAGGCTCCCCAAGGAGCCTTCATCAGCAAGGAAGGATATTACACCTATTTCTACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CCA 72 bp ATGATGTCTGCCTCCTTCCGGTCACTTTTGATCTCATaGTATGGCACCTCTTCAAAGGTCAGTGGGGTCACC +
Preference number: 6 (lower is better)
Translates to: MMSASFRSLLIS*YGTSSKVSGVT
Trigger: GGTGACCCCACTGACCTTTGAAGAGGTGCCATACCATGAGATCAAAAGTGACCGGAAGGAGGCAGACATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000246186.8
CDS CAA 72 bp AAAAAGATCATGATGTCTGCCTCCTTCCGGTCACTTTaGATCTCATGGTATGGCACCTCTTCAAAGGTCAGT +
Preference number: 6 (lower is better)
Translates to: KKIMMSASFRSL*ISWYGTSSKVS
Trigger: ACTGACCTTTGAAGAGGTGCCATACCATGAGATCAAAAGTGACCGGAAGGAGGCAGACATCATGATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246186.8