RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000087245

Ensembl transcript IDs: ENST00000219070.9, ENST00000437642.6, ENST00000543485.5, ENST00000564864.5, ENST00000566564.1, ENST00000568715.5, ENST00000570283.1, ENST00000570308.5

Found 621 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTCCCACTGCCCTGTGCCAGGCTGTCGGGCCACCAGTGCCCTCTTaGGACAGTCTCCATTGGCTCCAAGGGTTCTGTGAGCCACAGAAG +
Preference number: 1 (lower is better)
Translates to: CPTALCQAVGPPVPS*DSLHWLQGFCEPQK
Trigger: CTTCTGTGGCTCACAGAACCCTTGGAGCCAATGGAGACTGTCTCAAGAGGGCACTGGTGGCCCGACAGCCTGGCACAGGGCAGTGGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
3UTR CCA 90 bp GAGGGGGAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTaGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGT +
Preference number: 1 (lower is better)
Translates to: EGEGAPGRSTVSIYS*APGGATLWNLKLPG
Trigger: ACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
3UTR TCA 90 bp ACAGTCTCCATTGGCTCCAAGGGTTCTGTGAGCCACAGAAGGTTGTaGAAGGAGAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAA +
Preference number: 1 (lower is better)
Translates to: TVSIGSKGSVSHRRL*KEKSLKCGSTRAAQ
Trigger: TTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTCTCCTTTCACAACCTTCTGTGGCTCACAGAACCCTTGGAGCCAATGGAGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
3UTR TCA 90 bp GATGGCAAACACGGCCACTCAGTAGGTGTCTTTATTCATACTTGTTaGCATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGAGGGC +
Preference number: 1 (lower is better)
Translates to: DGKHGHSVGVFIHTC*HFPWGMVEGRGREG
Trigger: GCCCTCCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAAAGACACCTACTGAGTGGCCGTGTTTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219070.9
3UTR CCA 90 bp GGTAGGGACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTaGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCT +
Preference number: 1 (lower is better)
Translates to: GRDMLSRVNRGTITM*AEMHCAVTSDNLSP
Trigger: AGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
3UTR TCA 90 bp TCAGGGCTCTTTCTACAGGACAGAGGGACTAGAGCTTACTCTCCCTaGGGTTCTCTTGCTGTTTACTTTGGAAGCTCTGACCTTTCCAGC +
Preference number: 1 (lower is better)
Translates to: SGLFLQDRGTRAYSP*GSLAVYFGSSDLSS
Trigger: GCTGGAAAGGTCAGAGCTTCCAAAGTAAACAGCAAGAGAACCTCAGGGAGAGTAAGCTCTAGTCCCTCTGTCCTGTAGAAAGAGCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
3UTR GCA 90 bp GTTTACTTTGGAAGCTCTGACCTTTCCAGCAGACACCATCACCTGTaGCCTGCAGGGAGCAGAGATTCGGACTTTTTAAGTTTCCGCTTC +
Preference number: 1 (lower is better)
Translates to: VYFGSSDLSSRHHHL*PAGSRDSDFLSFRF
Trigger: GAAGCGGAAACTTAAAAAGTCCGAATCTCTGCTCCCTGCAGGGCACAGGTGATGGTGTCTGCTGGAAAGGTCAGAGCTTCCAAAGTAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219070.9
3UTR-3UTR CCA 90 bp GGAGGGCTGAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGGGCTCTGAGGGTTGGTaGGATTGGAGGGGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: GGLSGKPRLGFPPSSGEEGSEGW*DWRGKG
Trigger: CCCCTTCCCCCTCCAATCCCACCAACCCTCAGAGCC...CTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTCAGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
3UTR-3UTR CCA 90 bp TTGCTGATTCTTCAGGGCTCTTTCTACAGGACAGAGGGACTAGAGCTTACTCTCGGGGGAAGGGGCGCCTaGGAGGAGTACAGTCAGCAT +
Preference number: 2 (lower is better)
Translates to: LLILQGSFYRTEGLELTLGGRGA*EEYSQH
Trigger: ATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC...GAGAGTAAGCTCTAGTCCCTCTGTCCTGTAGAAAGAGCCCTGAAGAATCAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219070.9
3UTR-3UTR GCA 90 bp ACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAAAGCCTGTCGGGCCACCAGTaGCCTCTTGAGACAGTCTCC +
Preference number: 2 (lower is better)
Translates to: TKQTANVRKVLRQPAVKSLSGHQ*PLETVS
Trigger: GGAGACTGTCTCAAGAGGGCACTGGTGGCCCGACAG...GCTTTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
3UTR CAA 90 bp TTCTACAGGACAGAGGGACTAGAGCTTACTCTCCCTGAGGTTCTCTaGCTGTTTACTTTGGAAGCTCTGACCTTTCCAGCAGACACCATC +
Preference number: 2 (lower is better)
Translates to: FYRTEGLELTLPEVL*LFTLEALTFPADTI
Trigger: GATGGTGTCTGCTGGAAAGGTCAGAGCTTCCAAAGTAAACAGCAAGAGAACCTCAGGGAGAGTAAGCTCTAGTCCCTCTGTCCTGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
3UTR-3UTR TCA 90 bp CATACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAACCACCAGTGCCCTCTTaGGACAGTCTCCATTGGCTC +
Preference number: 2 (lower is better)
Translates to: HTKQTANVRKVLRQPAVKPPVPS*DSLHWL
Trigger: GAGCCAATGGAGACTGTCTCAAGAGGGCACTGGTGG...TTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
3UTR CAA 90 bp AAGAGGAAGCAAACCTCGAACAGATGCCACAATAAAGCAACAAAATaGCTGATTCTTCAGGGCTCTTTCTACAGGACAGAGGGACTAGAG +
Preference number: 2 (lower is better)
Translates to: KRKQTSNRCHNKATK*LILQGSFYRTEGLE
Trigger: CTCTAGTCCCTCTGTCCTGTAGAAAGAGCCCTGAAGAATCAGCAATTTTGTTGCTTTATTGTGGCATCTGTTCGAGGTTTGCTTCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
3UTR-3UTR TCA 90 bp TTGCTGATTCTTCAGGGCTCTTTCTACAGGACAGAGGGACTAGAGCTTACTCTCAAAGCAGGGCTGCGTTaGAAATATCAAAGTATCTCT +
Preference number: 2 (lower is better)
Translates to: LLILQGSFYRTEGLELTLKAGLR*KYQSIS
Trigger: AGAGATACTTTGATATTTTCAACGCAGCCCTGCTTT...GAGAGTAAGCTCTAGTCCCTCTGTCCTGTAGAAAGAGCCCTGAAGAATCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
3UTR CCA 72 bp GGTTCTAAGGCAGCCAGCAGTGAAAAGCCAGGGGTCTaGAGTGGCCACCTGGCCATGCCCTGTCCCACTGCC +
Preference number: 3 (lower is better)
Translates to: GSKAASSEKPGV*SGHLAMPCPTA
Trigger: GGCAGTGGGACAGGGCATGGCCAGGTGGCCACTCCAGACCCCTGGCTTTTCACTGCTGGCTGCCTTAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
3UTR TCA 72 bp GCCCTGTGCCAGGCTGTCGGGCCACCAGTGCCCTCTTaGGACAGTCTCCATTGGCTCCAAGGGTTCTGTGAG +
Preference number: 3 (lower is better)
Translates to: ALCQAVGPPVPS*DSLHWLQGFCE
Trigger: CTCACAGAACCCTTGGAGCCAATGGAGACTGTCTCAAGAGGGCACTGGTGGCCCGACAGCCTGGCACAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
3UTR CCA 72 bp GGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTaGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAA +
Preference number: 3 (lower is better)
Translates to: GAPGRSTVSIYS*APGGATLWNLK
Trigger: TTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
3UTR TCA 72 bp GTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCGTTaGAAATATCAAAGTATCTCTTTAGGGGTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: VAAPGQPKAGLR*KYQSISLGVAL
Trigger: CAGAGCCACCCCTAAAGAGATACTTTGATATTTTCAACGCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
3UTR-3UTR CAA 90 bp GAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCGCCACCAGTGCCCTCTaGAGACAGTCTCCATTGGCT +
Preference number: 3 (lower is better)
Translates to: EMHCAVTSDNLSPSVRKCATSAL*RQSPLA
Trigger: AGCCAATGGAGACTGTCTCAAGAGGGCACTGGTGGC...GCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
3UTR TCA 72 bp TCCCTGAGGTTCTCTTGCTGTTTACTTTGGAAGCTCTaGCCTTTCCAGCAGACACCATCACCTGTGCCCTGC +
Preference number: 3 (lower is better)
Translates to: SLRFSCCLLWKL*PFQQTPSPVPC
Trigger: GCAGGGCACAGGTGATGGTGTCTGCTGGAAAGGTCAGAGCTTCCAAAGTAAACAGCAAGAGAACCTCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
3UTR TCA 72 bp CACGGCCACTCAGTAGGTGTCTTTATTCATACTTGTTaGCATTTCCCATGGGGAATGGTTGAAGGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: HGHSVGVFIHTC*HFPWGMVEGRG
Trigger: GCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAAAGACACCTACTGAGTGGCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219070.9
3UTR CCA 72 bp AGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTaGAATCTTAAATTACCAGGTAGGAGTGAGAATGCT +
Preference number: 3 (lower is better)
Translates to: SIYSWAPGGATL*NLKLPGRSENA
Trigger: AGCATTCTCACTCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
3UTR GCA 72 bp GAAACAGACTTAAAGAGGAAGCAAACCTCGAACAGATaGCACAATAAAGCAACAAAATTGCTGATTCTTCAG +
Preference number: 3 (lower is better)
Translates to: ETDLKRKQTSNR*HNKATKLLILQ
Trigger: CTGAAGAATCAGCAATTTTGTTGCTTTATTGTGGCATCTGTTCGAGGTTTGCTTCCTCTTTAAGTCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR GCA 90 bp CGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGACCAGGGTCTTGGGAGTaGTCCAGCCCCATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RLPGPSGSFSSSPGPVYRPGSWE*SSPMAW
Trigger: CCACGCCATGGGGCTGGAGCACTCCCAAGACCCTGG...TCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp CTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGTGGGGGTGGGGCCGGTaGCAAGGTCAATGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LKARLPGPSGSFSSSPGPWGWGR*QGQCQE
Trigger: CTCCTGACATTGACCTTGGCACCGGCCCCACCCCCA...CGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGCCCAACACCAGTGCCTaGGGCGAAGGCATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LKARLPGPSGSFSSSPGPPNTSA*GEGMSQ
Trigger: CTGGCTCATGCCTTCGCCCCAGGCACTGGTGTTGGG...CGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATGGCTGGTCAGTGGCTTaGGGTACCCTCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARLPGPSGSFSSSPGPVYGWSVA*GTLAPG
Trigger: CCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCC...ATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGTGGTTGGGTCGAGGGTaGGGCTGGGCAGTGACCAGT +
Preference number: 4 (lower is better)
Translates to: LKARLPGPSGSFSSSPGPWLGRG*GWAVTS
Trigger: ACTGGTCACTGCCCAGCCCCACCCTCGACCCAACCA...CGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp CGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGACCTGGGGCGAAGGCATaGGCCAGGAGTCCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: RLPGPSGSFSSSPGPVYRPGAKA*ARSPSL
Trigger: TAAGGACGGACTCCTGGCTCATGCCTTCGCCCCAGG...TCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR TCA 90 bp CGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGACGTTGCCGCCCATGGTaGACAGGGCTTCATGGGGAC +
Preference number: 4 (lower is better)
Translates to: RLPGPSGSFSSSPGPVYRRCRPW*TGLHGD
Trigger: GTCCCCATGAAGCCCTGTTCACCATGGGCGGCAACG...TCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR TCA 90 bp AGAATGCTGATTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCAGGGGCAGGGAGGGCTaGGCGGGAAGCCACGGCTTG +
Preference number: 4 (lower is better)
Translates to: RMLISCRAEGTAARPLRVRGREG*AGSHGL
Trigger: CAAGCCGTGGCTTCCCGCTCAGCCCTCCCTGCCCCT...GACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAATCAGCATTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR GCA 90 bp CGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGATGGCCACATCTGGGTTaGCGCAGCGTGGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: RLPGPSGSFSSSPGPVYRWPHLG*RSVASA
Trigger: TGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCA...TCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTTGCGGCCAGGCTCAGTaGCCCTCCAGCCAGGCGCGC +
Preference number: 4 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPCGQAQ*PSSQAR
Trigger: GCGCGCCTGGCTGGAGGGGCACTGAGCCTGGCCGCA...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543485.5
CDS-3UTR CCA 90 bp GCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGGCCTCGCCGCCTGGTTaGAGCCTGCTCCGCGGCGCA +
Preference number: 4 (lower is better)
Translates to: AGSHGLVFLHPVEKRLGRASPPG*SLLRGA
Trigger: TGCGCCGCGGAGCAGGCTCCAACCAGGCGGCGAGGC...CCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp GGGGGAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGGCGGCATCCACTCGCTaGACATCAGGGGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: GGRGAWEEYSQHLFLGTGAASTR*TSGGSP
Trigger: GGGACTGCCCCCTGATGTCCAGCGAGTGGATGCCGC...CCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAGGCTCTGAGGGTTGGTaGGATTGGAGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RLPGPSGSFSSSPGPVYRGSEGW*DWRGKG
Trigger: CCCCTTCCCCCTCCAATCCCACCAACCCTCAGAGCC...TCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp CTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGTGCGGCCCTCAGTGGTaGAGCTGTCATAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: LKARLPGPSGSFSSSPGPCGPQW*SCHRMC
Trigger: GCACATCCTATGACAGCTGCACCACTGAGGGCCGCA...CGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp CCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGACATCTTTCCGTCACTaGGGCCGGCGCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGPSGSFSSSPGPVYRRQTSFRH*GRRWCS
Trigger: GCTGCACCAGCGCCGGCCGCAGTGACGGAAAGATGT...CTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp GGGGGAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGACATCTTTCCGTCACTaGGGCCGGCGCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGRGAWEEYSQHLFLGTGTSFRH*GRRWCS
Trigger: GCTGCACCAGCGCCGGCCGCAGTGACGGAAAGATGT...CCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCGCGGCATCCACTCGCTaGACATCAGGGGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSAASTR*TSGGSP
Trigger: GGGACTGCCCCCTGATGTCCAGCGAGTGGATGCCGC...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGGGGAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGGGCTCTGAGGGTTGGTaGGATTGGAGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GGRGAWEEYSQHLFLGTGGSEGW*DWRGKG
Trigger: CCCCTTCCCCCTCCAATCCCACCAACCCTCAGAGCC...CCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp AAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCGTTGAAACGGTGGCCTGGGGTTTaGCCGGCTCAGCGGCTCATG +
Preference number: 4 (lower is better)
Translates to: KSLKCGSTRAAQSRAALKRWPGV*PAQRLM
Trigger: CATGAGCCGCTGAGCCGGGCAAACCCCAGGCCACCG...TTTCAACGCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR GCA 90 bp AGAATGCTGATTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCAGCGGTAGCCATCCGTaGGGCCCTCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RMLISCRAEGTAARPLRVSGSHP*GPQWCS
Trigger: GCTGCACCACTGAGGGCCGCACGGATGGCTACCGCT...GACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAATCAGCATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCACATCTTTCCGTCACTaGGGCCGGCGCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSTSFRH*GRRWCS
Trigger: GCTGCACCAGCGCCGGCCGCAGTGACGGAAAGATGT...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp AGAATGCTGATTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCCAGGGTCTTGGGAGTaGTCCAGCCCCATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RMLISCRAEGTAARPLRVPGSWE*SSPMAW
Trigger: CCACGCCATGGGGCTGGAGCACTCCCAAGACCCTGG...GACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAATCAGCATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp GCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATGGCATTCCAGGCATCTaGGATGAGCTTGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: ARLPGPSGSFSSSPGPVYGIPGI*DELGEA
Trigger: GGCTTCCCCAAGCTCATCGCAGATGCCTGGAATGCC...ATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCGCTCCGAGGGTCCGCTaGCTCGGTGGCCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRAAPRVR*LGGLGF
Trigger: AAACCCCAGGCCACCGAGCCAGCGGACCCTCGGAGC...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp CCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGCCGTGCGGCCCTCAGTaGTGCAGCTGTCATAGGATG +
Preference number: 4 (lower is better)
Translates to: PGPSGSFSSSPGPVYRRQPCGPQ*CSCHRM
Trigger: CATCCTATGACAGCTGCACCACTGAGGGCCGCACGG...CTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCACTGCGGCCGGCGCTaGTGCAGCTCTCATATTTGT +
Preference number: 4 (lower is better)
Translates to: ARLPGPSGSFSSSPGPVYHCGRR*CSSHIC
Trigger: ACAAATATGAGAGCTGCACCAGCGCCGGCCGCAGTG...ATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGCCTTCTCCTCCTGTaGGGCCTCGTATACCGCATC +
Preference number: 4 (lower is better)
Translates to: RLPGPSGSFSSSPGPVYRSLLLL*GLVYRI
Trigger: GATGCGGTATACGAGGCCCCACAGGAGGAGAAGGCT...TCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCTCCCAGGCTGGTCAGTaGCTTGGGGTACCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSSQAGQ*LGVPSL
Trigger: GAGCGAGGGTACCCCAAGCCACTGACCAGCCTGGGA...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGGGGCAGTCCCAGGCTaGTCAGTGGCTTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEGAVPG*SVAWGT
Trigger: GGTACCCCAAGCCACTGACCAGCCTGGGACTGCCCC...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp TCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGGGGGCAGTCCCAGGCTaGTCAGTGGCTTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: SSSPGPVYRRQWRGRACGGAVPG*SVAWGT
Trigger: GGTACCCCAAGCCACTGACCAGCCTGGGACTGCCCC...CCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCGGCATCCACTCGCTaGACATCAGGGGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGAASTR*TSGGSP
Trigger: GGGACTGCCCCCTGATGTCCAGCGAGTGGATGCCGC...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTGGGGGAAGGGGCGCCTaGGAGGAGTACAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: AVELKARLPGPSGSFSSSGGRGA*EEYSQH
Trigger: ATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC...AGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGGGAAGCCACGGCTTaGTTTTCCTCCATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ARLPGPSGSFSSSPGPVYREATA*FSSIQW
Trigger: CCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCG...ATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGACGTTGCCGCCCATGGTaGACAGGGCTTCATGGGGAC +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRRCRPW*TGLHGD
Trigger: GTCCCCATGAAGCCCTGTTCACCATGGGCGGCAACG...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR TCA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGTGCAGATCTCAGGAGTaGCAGGGCCCAGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRCRSQE*QGPAWG
Trigger: CCCCCACGCTGGGCCCTGTCACTCCTGAGATCTGCA...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR TCA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGTGCAGATCTCAGGAGTaGCAGGGCCCAGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGCRSQE*QGPAWG
Trigger: CCCCCACGCTGGGCCCTGTCACTCCTGAGATCTGCA...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR TCA 90 bp TCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGATGCAGATCTCAGGAGTaGCAGGGCCCAGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SGSFSSSPGPVYRRQWRGCRSQE*QGPAWG
Trigger: CCCCCACGCTGGGCCCTGTCACTCCTGAGATCTGCA...TCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGATGGCCACATCTGGGTTaGCGCAGCGTGGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRWPHLG*RSVASA
Trigger: TGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCA...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGTGGCCACATCTGGGTTaGCGCAGCGTGGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEWPHLG*RSVASA
Trigger: TGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCA...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGACTCCCCCAACACCAGTaGCTGGGGCGAAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRLPQHQ*LGRRHE
Trigger: CTCATGCCTTCGCCCCAGGCACTGGTGTTGGGGGAG...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGCTCCCCCAACACCAGTaGCTGGGGCGAAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGELPQHQ*LGRRHE
Trigger: CTCATGCCTTCGCCCCAGGCACTGGTGTTGGGGGAG...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGAGCGGTAGCCATCCGTaGGGCCCTCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRSGSHP*GPQWCS
Trigger: GCTGCACCACTGAGGGCCGCACGGATGGCTACCGCT...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAACATCTTTCCGTCACTaGGGCCGGCGCTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGTSFRH*GRRWCS
Trigger: GCTGCACCAGCGCCGGCCGCAGTGACGGAAAGATGT...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGCCAGGGTCTTGGGAGTaGTCCAGCCCCATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVPGSWE*SSPMAW
Trigger: CCACGCCATGGGGCTGGAGCACTCCCAAGACCCTGG...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGTGGGGGTGGGGCCGGTaGCAAGGTCAATGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEWGWGR*QGQCQE
Trigger: CTCCTGACATTGACCTTGGCACCGGCCCCACCCCCA...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp GGGGGAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGACCCTCGCTCCAGGGTaGTGGCTGAGTAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: GGRGAWEEYSQHLFLGTGTLAPG*WLSRSS
Trigger: ACTGGATCTACTCAGCCAGCACCCTGGAGCGAGGGT...CCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp CCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGGGCATTCCAGGCATCTaGGATGAGCTTGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PGPSGSFSSSPGPVYRRQGIPGI*DELGEA
Trigger: GGCTTCCCCAAGCTCATCGCAGATGCCTGGAATGCC...CTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGGACATGGGTCCGCTGGCTCGGTaGCCTGGGGTTTGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SHGLVFLHPVEKRLGRDMGPLAR*PGVCPA
Trigger: AGCCGGGCAAACCCCAGGCCACCGAGCCAGCGGACC...CATGTCCCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGACCCAACACCAGTGCCTaGGGCGAAGGCATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRPNTSA*GEGMSQ
Trigger: CTGGCTCATGCCTTCGCCCCAGGCACTGGTGTTGGG...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp AAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCCAACACCAGTGCCTaGGGCGAAGGCATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KGRLGGVQSASILGHREEPNTSA*GEGMSQ
Trigger: CTGGCTCATGCCTTCGCCCCAGGCACTGGTGTTGGG...CTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GGGGGAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAACAGGCTGTACCCTTaGTCAGGGCAGAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GGRGAWEEYSQHLFLGTGNRLYP*SGQKPH
Trigger: GTGGGGCTTCTGCCCTGACCAAGGGTACAGCCTGTT...CCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGAGGGCCCCAGGGTCTTaGGAGTGCTCCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRRAPGS*ECSSPM
Trigger: CATGGGGCTGGAGCACTCCCAAGACCCTGGGGCCCT...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGCTCGCTCCAGGGTGCTaGCTGAGTAGATCCAGTATT +
Preference number: 4 (lower is better)
Translates to: LKARLPGPSGSFSSSPGPLAPGC*LSRSSI
Trigger: AATACTGGATCTACTCAGCCAGCACCCTGGAGCGAG...CGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGGCTGGTCAGTGGCTTaGGGTACCCTCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPGWSVA*GTLAPG
Trigger: CCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCC...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCGCGGCATCCACTCGCTaGACATCAGGGGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRAAASTR*TSGGSP
Trigger: GGGACTGCCCCCTGATGTCCAGCGAGTGGATGCCGC...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTGGTGGCTCTGAGGGTTaGTGGGATTGGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AVELKARLPGPSGSFSSSGGSEG*WDWRGK
Trigger: CTTCCCCCTCCAATCCCACCAACCCTCAGAGCCACC...AGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGATCTGGAGTGGCCACCTaGCCATGCCCTGTCCCACTG +
Preference number: 4 (lower is better)
Translates to: EGAPGRSTVSIYSWAPGGSGVAT*PCPVPL
Trigger: CAGTGGGACAGGGCATGGCCAGGTGGCCACTCCAGA...TCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCCTCGCTCTTGGCACGTaGGGGGCAGAAAGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSLALGT*GAERRS
Trigger: GCTCCTTCTTTCTGCCCCCCACGTGCCAAGAGCGAG...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGCCTGGGGCGAAGGCATaGGCCAGGAGTCCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVPGAKA*ARSPSL
Trigger: TAAGGACGGACTCCTGGCTCATGCCTTCGCCCCAGG...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR TCA 90 bp TCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGACCTGGGGCGAAGGCATaGGCCAGGAGTCCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SGSFSSSPGPVYRRQWRGPGAKA*ARSPSL
Trigger: TAAGGACGGACTCCTGGCTCATGCCTTCGCCCCAGG...TCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR TCA 90 bp TCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGACGTTGCCGCCCATGGTaGACAGGGCTTCATGGGGAC +
Preference number: 4 (lower is better)
Translates to: SGSFSSSPGPVYRRQWRGRCRPW*TGLHGD
Trigger: GTCCCCATGAAGCCCTGTTCACCATGGGCGGCAACG...TCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR TCA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAACGTTGCCGCCCATGGTaGACAGGGCTTCATGGGGAC +
Preference number: 4 (lower is better)
Translates to: PGPSLVLQARCIEGSGEERCRPW*TGLHGD
Trigger: GTCCCCATGAAGCCCTGTTCACCATGGGCGGCAACG...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp GAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAAGCGGTAGCCATCCGTaGGGCCCTCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: EREATAWFSSIQWRRDSVSGSHP*GPQWCS
Trigger: GCTGCACCACTGAGGGCCGCACGGATGGCTACCGCT...TACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp GCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTGCCAAACTCGTGGGCTaGCACGAGGAACAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: AVELKARLPGPSGSFSSSAKLVG*HEEQAV
Trigger: TACAGCCTGTTCCTCGTGGCAGCCCACGAGTTTGGC...AGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTTGGGGGTGGGGCCGGTaGCAAGGTCAATGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPWGWGR*QGQCQE
Trigger: CTCCTGACATTGACCTTGGCACCGGCCCCACCCCCA...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGTGGGGGTGGGGCCGGTaGCAAGGTCAATGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVWGWGR*QGQCQE
Trigger: CTCCTGACATTGACCTTGGCACCGGCCCCACCCCCA...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp GGAGGGCTGAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGCTGTCGGGCCACCAGTaGCCTCTTGAGACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGLSGKPRLGFPPSSGEELSGHQ*PLETVS
Trigger: GGAGACTGTCTCAAGAGGGCACTGGTGGCCCGACAG...CTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTCAGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGTGGGTTGCCGCAGCGTaGCTTCCGCATGGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: SSSPGPVYRRQWRGRACGWVAAA*LPHGLD
Trigger: ATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCA...CCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp AAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGTGGGTTGCCGCAGCGTaGCTTCCGCATGGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: KGRLGGVQSASILGHREEWVAAA*LPHGLD
Trigger: ATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCA...CTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATTTCACACGGACCACTTaGCCTTCTCCCAAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: ARLPGPSGSFSSSPGPVYFTRTT*PSPKVH
Trigger: ATGGACCTTGGGAGAAGGCCAAGTGGTCCGTGTGAA...ATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCGTGAACAGGGCTTCATaGGGACAGAAGCCGTACTTG +
Preference number: 4 (lower is better)
Translates to: ELKARLPGPSGSFSSSPGVNRAS*GQKPYL
Trigger: CAAGTACGGCTTCTGTCCCCATGAAGCCCTGTTCAC...GCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTAACAGGCTGTACCCTTaGTCAGGGCAGAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: AVELKARLPGPSGSFSSSNRLYP*SGQKPH
Trigger: GTGGGGCTTCTGCCCTGACCAAGGGTACAGCCTGTT...AGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAAGGGCCCCAGGGTCTTaGGAGTGCTCCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: GGVQSASILGHREEPLSGRAPGS*ECSSPM
Trigger: CATGGGGCTGGAGCACTCCCAAGACCCTGGGGCCCT...TCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGTCCCAGGCTGGTCAGTaGCTTGGGGTACCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRSQAGQ*LGVPSL
Trigger: GAGCGAGGGTACCCCAAGCCACTGACCAGCCTGGGA...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGGGGGGAAGGGGCGCCTaGGAGGAGTACAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGGGRGA*EEYSQH
Trigger: ATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGGCTCTGAGGGTTGGTaGGATTGGAGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPGSEGW*DWRGKG
Trigger: CCCCTTCCCCCTCCAATCCCACCAACCCTCAGAGCC...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGTTTTCCTCCATCCAGTaGAGAAGAGACTCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: LKARLPGPSGSFSSSPGPFSSIQ*RRDSVG
Trigger: CCCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAA...CGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR CCA 90 bp GGAGAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCGTTCGGGAAGCCACGGCTTaGTTTTCCTCCATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GEEPEVWQHQGSPKQGCVREATA*FSSIQW
Trigger: CCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCG...AACGCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR TCA 90 bp AAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGACAGGGGGCACCTTCTaGGTTCCCACCAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: KGRLGGVQSASILGHREETGGTF*VPTNSG
Trigger: TCCACTGTTGGTGGGAACTCAGAAGGTGCCCCCTGT...CTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR TCA 90 bp GCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATAGCCACAGAAGGTTGTaGAAGGAGAAGAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ARLPGPSGSFSSSPGPVYSHRRL*KEKSLK
Trigger: CTTCAGGCTCTTCTCCTTTCACAACCTTCTGTGGCT...ATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR TCA 90 bp AGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACAGGGGCAGGGAGGGCTaGGCGGGAAGCCACGGCTTG +
Preference number: 4 (lower is better)
Translates to: RGTITMWAEMHCAVTSDNRGREG*AGSHGL
Trigger: CAAGCCGTGGCTTCCCGCTCAGCCCTCCCTGCCCCT...GTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp CATCCAGTGGAGAAGAGACTCGGTAGGGACATGCTAAGTAGAGTGAACAGGGGAAGGGGCAGGGAGGGCTaGGCGGGAAGCCACGGCTTG +
Preference number: 4 (lower is better)
Translates to: HPVEKRLGRDMLSRVNRGRGREG*AGSHGL
Trigger: CAAGCCGTGGCTTCCCGCTCAGCCCTCCCTGCCCCT...TCCCCTGTTCACTCTACTTAGCATGTCCCTACCGAGTCTCTTCTCCACTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp TCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGCCTAGGGCTTGCAGATaGGCAGGCTTTCAAGCGCTC +
Preference number: 4 (lower is better)
Translates to: SSSPGPVYRRQWRGRACGPRACR*AGFQAL
Trigger: GAGCGCTTGAAAGCCTGCTCATCTGCAAGCCCTAGG...CCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR GCA 90 bp GACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACCGCCTGGTTGGAGCCTaGTCCGCGGCGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: DMLSRVNRGTITMWAEMHRLVGA*SAAQGC
Trigger: GCAGCCCTGCGCCGCGGAGCAGGCTCCAACCAGGCG...GTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR GCA 90 bp GCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTTCAGCACAAACAGGTTaGAGCTCTCCTTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AVELKARLPGPSGSFSSSSAQTG*SSPWGS
Trigger: GCTGCCCCAAGGAGAGCTGCAACCTGTTTGTGCTGA...AGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp TCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGAGGAAGCCATCGCTaGGGCCGGTATCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SGSFSSSPGPVYRRQWRGRGSHR*GRYQCS
Trigger: GCTGCACTGATACCGGCCGCAGCGATGGCTTCCTCT...TCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp TCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGTGCGGCCCTCAGTGGTaGAGCTGTCATAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: SSSPGPVYRRQWRGRACGCGPQW*SCHRMC
Trigger: GCACATCCTATGACAGCTGCACCACTGAGGGCCGCA...CCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGATGCGGCCCTCAGTGGTaGAGCTGTCATAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGCGPQW*SCHRMC
Trigger: GCACATCCTATGACAGCTGCACCACTGAGGGCCGCA...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGATGCGGCCGGCGCTGGTaGAGCTCTCATATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGCGRRW*SSHICC
Trigger: GCAACAAATATGAGAGCTGCACCAGCGCCGGCCGCA...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCGGCAGAAGCCCCACTTaGGGTCATCATCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSGRSPT*GHHRSW
Trigger: CCAACTACGATGATGACCGCAAGTGGGGCTTCTGCC...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp TTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTGTAGGTGTAAATGGGTaGCATCAGGGCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LAVELKARLPGPSGSFSSVGVNG*HQGPRV
Trigger: GACCCTGGGGCCCTGATGGCACCCATTTACACCTAC...ACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp GCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTACCCTCGCTCCAGGGTaGTGGCTGAGTAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: APGRSTVSIYSWAPGGATTLAPG*WLSRSS
Trigger: ACTGGATCTACTCAGCCAGCACCCTGGAGCGAGGGT...AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGCATTCCAGGCATCTaGGATGAGCTTGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRGIPGI*DELGEA
Trigger: GGCTTCCCCAAGCTCATCGCAGATGCCTGGAATGCC...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp GCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCCATCACCTGTGCCCTaGAGGGAGCAGAGATTCGGA +
Preference number: 4 (lower is better)
Translates to: APGRSTVSIYSWAPGGATPSPVP*REQRFG
Trigger: TCCGAATCTCTGCTCCCTGCAGGGCACAGGTGATGG...AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp AGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGGCTGGCTCGGTGGCCTaGGGTTTGCCCGGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: SRVNRGTITMWAEMHCAVAGSVA*GLPGSA
Trigger: CGCTGAGCCGGGCAAACCCCAGGCCACCGAGCCAGC...CACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCGGTTGCAGCTCTCCTTaGGGCAGCCATAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSGCSSP*GSHRRC
Trigger: ACACCTTCTATGGCTGCCCCAAGGAGAGCTGCAACC...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAATGGGTTGCCGCAGCGTaGCTTCCGCATGGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: PGPSLVLQARCIEGSGEEWVAAA*LPHGLD
Trigger: ATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCA...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGAGGGCTGAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGGTAGTTGGCCACATCTaGGTTGCCGCAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GGLSGKPRLGFPPSSGEEVVGHI*VAAAWL
Trigger: AAGCCACGCTGCGGCAACCCAGATGTGGCCAACTAC...CTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTCAGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTGTAGTTGGCCACATCTaGGTTGCCGCAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: APGRSTVSIYSWAPGGATVVGHI*VAAAWL
Trigger: AAGCCACGCTGCGGCAACCCAGATGTGGCCAACTAC...AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCTCGAGAAAACCGCAGTaGGGTCACATCGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSSRKPQ*GHIAPD
Trigger: GTCTGGAGCGATGTGACCCCACTGCGGTTTTCTCGA...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTTCACACGGACCACTTaGCCTTCTCCCAAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: PGPSGSFSSSPGPVYRRQFTRTT*PSPKVH
Trigger: ATGGACCTTGGGAGAAGGCCAAGTGGTCCGTGTGAA...CTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp TCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGACCGTGCGGCCCTCAGTaGTGCAGCTGTCATAGGATG +
Preference number: 4 (lower is better)
Translates to: SGSFSSSPGPVYRRQWRGPCGPQ*CSCHRM
Trigger: CATCCTATGACAGCTGCACCACTGAGGGCCGCACGG...TCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCACCAACAGTGGACATaGCGGTCTCAGGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: APGRSTVSIYSWAPGGATHQQWT*RSQGRS
Trigger: GCTTCTGCCCTGAGACCGCCATGTCCACTGTTGGTG...AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGCACCAACAGTGGACATaGCGGTCTCAGGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEHQQWT*RSQGRS
Trigger: GCTTCTGCCCTGAGACCGCCATGTCCACTGTTGGTG...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGAGTTCCCACCAACAGTaGACATGGCGGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGESSHQQ*TWRSQG
Trigger: GCCCTGAGACCGCCATGTCCACTGTTGGTGGGAACT...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTAACAGGCTGTACCCTTaGTCAGGGCAGAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: APGRSTVSIYSWAPGGATNRLYP*SGQKPH
Trigger: GTGGGGCTTCTGCCCTGACCAAGGGTACAGCCTGTT...AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGAACAGGCTGTACCCTTaGTCAGGGCAGAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGENRLYP*SGQKPH
Trigger: GTGGGGCTTCTGCCCTGACCAAGGGTACAGCCTGTT...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCATGGGCTTGTCACGTaGCGTCACAGTCCGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSHGLVT*RHSPPN
Trigger: ATTTGGCGGACTGTGACGCCACGTGACAAGCCCATG...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCGTTGAAAGGTGGCTCTGAGGGTTaGTGGGATTGGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KSLKCGSTRAAQSRAALKGGSEG*WDWRGK
Trigger: CTTCCCCCTCCAATCCCACCAACCCTCAGAGCCACC...TTTCAACGCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCGTTGAAAGAAAAGCCAGGGGTCTaGAGTGGCCACCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: KSLKCGSTRAAQSRAALKEKPGV*SGHLAM
Trigger: CATGGCCAGGTGGCCACTCCAGACCCCTGGCTTTTC...TTTCAACGCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCGAAAAGCCAGGGGTCTaGAGTGGCCACCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRAEKPGV*SGHLAM
Trigger: CATGGCCAGGTGGCCACTCCAGACCCCTGGCTTTTC...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GGGAGGGCTGAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGACGGGAAGCCACGGCTTaGTTTTCCTCCATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GRAEREATAWFSSIQWRRREATA*FSSIQW
Trigger: CCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCG...TCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTCAGCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR CCA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGACATTCCACAGCAGCTaGGCTGGGCAGTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGTFHSS*AGQSMG
Trigger: CCCCATGGACTGCCCAGCCCAGCTGCTGTGGAATGT...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCACAGGGGGCACCTTCTaGGTTCCCACCAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRATGGTF*VPTNSG
Trigger: TCCACTGTTGGTGGGAACTCAGAAGGTGCCCCCTGT...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR TCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGAAAGGAGAAGAGCCTaGAGTGTGGCAGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVERRRA*SVAAPG
Trigger: CCCTGGTGCTGCCACACTTCAGGCTCTTCTCCTTTC...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR TCA 90 bp CAGAAGGTTGTGAAAGGAGAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAGCCACGACCACACAGTaGGCCAGCAGCTATCTTCCC +
Preference number: 4 (lower is better)
Translates to: QKVVKGEEPEVWQHQGSPATTTQ*ASSYLP
Trigger: GGGAAGATAGCTGCTGGCTCACTGTGTGGTCGTGGC...TGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTCTCCTTTCACAACCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR GCA 90 bp AAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGTGCGGCCGGTATCAGTaGAGCTGTTGTACTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KGRLGGVQSASILGHREECGRYQ*SCCTPC
Trigger: GCAAGGAGTACAACAGCTGCACTGATACCGGCCGCA...CTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGATGCGGCCGGTATCAGTaGAGCTGTTGTACTCCTTGC +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGCGRYQ*SCCTPC
Trigger: GCAAGGAGTACAACAGCTGCACTGATACCGGCCGCA...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp GGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAAGAGGAAGCCATCGCTaGGGCCGGTATCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGVQSASILGHREEPLSGRGSHR*GRYQCS
Trigger: GCTGCACTGATACCGGCCGCAGCGATGGCTTCCTCT...TCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTAGAGGAAGCCATCGCTaGGGCCGGTATCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACRGSHR*GRYQCS
Trigger: GCTGCACTGATACCGGCCGCAGCGATGGCTTCCTCT...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTTGCGGCCGGCGCTGGTaGAGCTCTCATATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPCGRRW*SSHICC
Trigger: GCAACAAATATGAGAGCTGCACCAGCGCCGGCCGCA...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGGCAGAAGCCCCACTTaGGGTCATCATCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEGRSPT*GHHRSW
Trigger: CCAACTACGATGATGACCGCAAGTGGGGCTTCTGCC...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp GCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGGCCAAACTCGTGGGCTaGCACGAGGAACAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: AGSHGLVFLHPVEKRLGRAKLVG*HEEQAV
Trigger: TACAGCCTGTTCCTCGTGGCAGCCCACGAGTTTGGC...CCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGCCAAACTCGTGGGCTaGCACGAGGAACAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVAKLVG*HEEQAV
Trigger: TACAGCCTGTTCCTCGTGGCAGCCCACGAGTTTGGC...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCGTAGGTGTAAATGGGTaGCATCAGGGCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRAVGVNG*HQGPRV
Trigger: GACCCTGGGGCCCTGATGGCACCCATTTACACCTAC...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTAGGTGTAAATGGGTaGCATCAGGGCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPVGVNG*HQGPRV
Trigger: GACCCTGGGGCCCTGATGGCACCCATTTACACCTAC...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp GCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGGTAGGTGTAAATGGGTaGCATCAGGGCCCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AGSHGLVFLHPVEKRLGRVGVNG*HQGPRV
Trigger: GACCCTGGGGCCCTGATGGCACCCATTTACACCTAC...CCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGACCCTCGCTCCAGGGTaGTGGCTGAGTAGATCCAGT +
Preference number: 4 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRTLAPG*WLSRSS
Trigger: ACTGGATCTACTCAGCCAGCACCCTGGAGCGAGGGT...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CAGAAGGTTGTGAAAGGAGAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCACTGTCGGGCCACCAGTaGCCTCTTGAGACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QKVVKGEEPEVWQHQGSPLSGHQ*PLETVS
Trigger: GGAGACTGTCTCAAGAGGGCACTGGTGGCCCGACAG...TGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTCTCCTTTCACAACCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTAGGTATTGGCAACACTaGGGCCAGGCTCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACRYWQH*GQAQCP
Trigger: GGGGCACTGAGCCTGGCCGCAGTGTTGCCAATACCT...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543485.5
CDS-3UTR GCA 90 bp CCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGCTCCTAGCTGCACTTTaGGAGCAAGAGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PGPSGSFSSSPGPVYRRQLLAAL*EQELCK
Trigger: TTTGCAGAGCTCTTGCTCGCAAAGTGCAGCTAGGAG...CTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CCA 90 bp GACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACCTGGCTCGGTGCGTGTaGCCGCCTCGCCGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: DMLSRVNRGTITMWAEMHLARCV*PPRRLV
Trigger: AACCAGGCGGCGAGGCGGCCACACGCACCGAGCCAG...GTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGTAGTTGGCCACATCTaGGTTGCCGCAGCGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PGPSLVLQARCIEGSGEEVVGHI*VAAAWL
Trigger: AAGCCACGCTGCGGCAACCCAGATGTGGCCAACTAC...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCGGTTCTTGTCCCACTTaGGCTTGCGAGGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSGSCPT*ACEGRS
Trigger: ACTTCTTCCCTCGCAAGCCCAAGTGGGACAAGAACC...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCACATCGCTCCAGACTTaGAAGGCACGAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSTSLQT*KARAKA
Trigger: TGCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGT...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGATCGAGAAAACCGCAGTaGGGTCACATCGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGSRKPQ*GHIAPD
Trigger: GTCTGGAGCGATGTGACCCCACTGCGGTTTTCTCGA...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGATCTGCCTCTCCATCATaGATTCGAGAAAACCGCAGT +
Preference number: 4 (lower is better)
Translates to: RLPGPSGSFSSSPGPVYRSASPS*IRENRS
Trigger: ACTGCGGTTTTCTCGAATCCATGATGGAGAGGCAGA...TCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGCCCTGGAAGCGGAATaGAAACTTGCAGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVALEAE*KLAGLS
Trigger: GGACAGCCCTGCAAGTTTCCATTCCGCTTCCAGGGC...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCAGCCTTCTCCTCCTGTaGGGCCTCGTATACCGCATC +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRASLLLL*GLVYRI
Trigger: GATGCGGTATACGAGGCCCCACAGGAGGAGAAGGCT...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGAGAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCGTTCTCGCTCCAGGGTGCTaGCTGAGTAGATCCAGTATT +
Preference number: 4 (lower is better)
Translates to: GEEPEVWQHQGSPKQGCVLAPGC*LSRSSI
Trigger: AATACTGGATCTACTCAGCCAGCACCCTGGAGCGAG...AACGCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGGACATGTCCCAGGCTGGTCAGTaGCTTGGGGTACCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SHGLVFLHPVEKRLGRDMSQAGQ*LGVPSL
Trigger: GAGCGAGGGTACCCCAAGCCACTGACCAGCCTGGGA...CATGTCCCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGACCAGGTTATCGGGGATaGCATTCCAGGCATCTGCGA +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGPGYRG*HSRHLR
Trigger: TCGCAGATGCCTGGAATGCCATCCCCGATAACCTGG...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGGAGGGCTGAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGACCAGGTTATCGGGGATaGCATTCCAGGCATCTGCGA +
Preference number: 4 (lower is better)
Translates to: GRAEREATAWFSSIQWRRPGYRG*HSRHLR
Trigger: TCGCAGATGCCTGGAATGCCATCCCCGATAACCTGG...TCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTCAGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGGTCAGCATCTATTCTTaGGCACCGGGAGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: KGRLGGVQSASILGHREEVSIYS*APGGAT
Trigger: AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC...CTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTTCTGGCTGGGTCTGTaGCCCTTGTCTAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRAFWLGL*PLSRLC
Trigger: GCAGAGCCTAGACAAGGGCCACAGACCCAGCCAGAA...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGTTTCCGCTTCTGGCTaGGTCTGTGGCCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEVSASG*VCGPCL
Trigger: TAGACAAGGGCCACAGACCCAGCCAGAAGCGGAAAC...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCTTAAGTTTCCGCTTCTaGCTGGGTCTGTGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSLSFRF*LGLWPL
Trigger: CAAGGGCCACAGACCCAGCCAGAAGCGGAAACTTAA...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTATTCTTCATCCTGGTTaGGTCGAGGGTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPILHPG*VEGGAG
Trigger: CCCAGCCCCACCCTCGACCCAACCAGGATGAAGAAT...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp AGAATGCTGATTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCGCTCCAAGGGTTCTGTaGGCCACAGAAGGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RMLISCRAEGTAARPLRVAPRVL*ATEGCE
Trigger: TTCACAACCTTCTGTGGCTCACAGAACCCTTGGAGC...GACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAATCAGCATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp AAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGACAAGAAGGGGAACTTaGAGTACTCCCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: KGRLGGVQSASILGHREETRRGT*STPHRR
Trigger: ACGCCGATGGGGAGTACTGCAAGTTCCCCTTCTTGT...CTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAACGCCGCCGCAGGTCCTaGCAATCCCTTTGTATGTTT +
Preference number: 4 (lower is better)
Translates to: PGPSLVLQARCIEGSGEERRRRS*QSLCMF
Trigger: AAACATACAAAGGGATTGCCAGGACCTGCGGCGGCG...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp GCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTAGCGTGGCTTCCGCATaGTCTCGATGGTATTCTGGT +
Preference number: 4 (lower is better)
Translates to: APGRSTVSIYSWAPGGATSVASA*SRWYSG
Trigger: ACCAGAATACCATCGAGACCATGCGGAAGCCACGCT...AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAAGCGTGGCTTCCGCATaGTCTCGATGGTATTCTGGT +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGSVASA*SRWYSG
Trigger: ACCAGAATACCATCGAGACCATGCGGAAGCCACGCT...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp TTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTGGAAGAAGTTGTAGTTaGCCACATCTGGGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: LAVELKARLPGPSGSFSSGRSCS*PHLGCR
Trigger: GCGGCAACCCAGATGTGGCCAACTACAACTTCTTCC...ACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGGAAGAAGTTGTAGTTaGCCACATCTGGGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGGRSCS*PHLGCR
Trigger: GCGGCAACCCAGATGTGGCCAACTACAACTTCTTCC...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCGTTGAAGGAAGAAGTTGTAGTTaGCCACATCTGGGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: EEPEVWQHQGSPKQGCVEGRSCS*PHLGCR
Trigger: GCGGCAACCCAGATGTGGCCAACTACAACTTCTTCC...TTCAACGCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTTCACACGGACCACTTaGCCTTCTCCCAAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: LAVELKARLPGPSGSFSSFTRTT*PSPKVH
Trigger: ATGGACCTTGGGAGAAGGCCAAGTGGTCCGTGTGAA...ACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCAAAGTTGTAGGTGGTaGAGCACCAGAGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSQSCRW*STRGSH
Trigger: ATGGCTTCCTCTGGTGCTCCACCACCTACAACTTTG...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp TGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGCACCAACAGTGGACATaGCGGTCTCAGGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: WEEYSQHLFLGTGRSHSLHQQWT*RSQGRS
Trigger: GCTTCTGCCCTGAGACCGCCATGTCCACTGTTGGTG...CAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTCACTGCGGCCGGCGCTaGTGCAGCTCTCATATTTGT +
Preference number: 4 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACHCGRR*CSSHIC
Trigger: ACAAATATGAGAGCTGCACCAGCGCCGGCCGCAGTG...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTGGTCATCATCGTAGTTaGCTGTGGTCGCACACCACA +
Preference number: 4 (lower is better)
Translates to: APGRSTVSIYSWAPGGATGHHRS*LWSHTT
Trigger: TGTGGTGTGCGACCACAGCCAACTACGATGATGACC...AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGTCATCATCGTAGTTaGCTGTGGTCGCACACCACA +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRGHHRS*LWSHTT
Trigger: TGTGGTGTGCGACCACAGCCAACTACGATGATGACC...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGAGGGCTGAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGGGTCATCATCGTAGTTaGCTGTGGTCGCACACCACA +
Preference number: 4 (lower is better)
Translates to: GGLSGKPRLGFPPSSGEEGHHRS*LWSHTT
Trigger: TGTGGTGTGCGACCACAGCCAACTACGATGATGACC...CTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTCAGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGAGGAGGGCCCCAGGGTCTTaGGAGTGCTCCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: FILVDISHGEWLKGGAGRRAPGS*ECSSPM
Trigger: CATGGGGCTGGAGCACTCCCAAGACCCTGGGGCCCT...CCTCCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCCCTTGATGTCATCCTaGGACAGACGGAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSPLMSS*DRRKFL
Trigger: CAAGAACTTCCGTCTGTCCCAGGATGACATCAAGGG...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACGGCTGGTCAGTGGCTTaGGGTACCCTCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGTITMWAEMHCAVTSDNGWSVA*GTLAPG
Trigger: CCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCC...GTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp ATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCGGGGCAGTCCCAGGCTaGTCAGTGGCTTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: MWAEMHCAVTSDNLSPSVGAVPG*SVAWGT
Trigger: GGTACCCCAAGCCACTGACCAGCCTGGGACTGCCCC...GACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGCCAGGTTATCGGGGATaGCATTCCAGGCATCTGCGA +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVPGYRG*HSRHLR
Trigger: TCGCAGATGCCTGGAATGCCATCCCCGATAACCTGG...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGAAGGTGTTCAGGTATTaGCAACACTGCGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEKVFRY*QHCGQA
Trigger: AGCCTGGCCGCAGTGTTGCCAATACCTGAACACCTT...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543485.5
CDS-3UTR CCA 90 bp AGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGGACATGGCCCATTCTTCATCCTaGTTGGGTCGAGGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SHGLVFLHPVEKRLGRDMAHSSS*LGRGWG
Trigger: GCCCCACCCTCGACCCAACCAGGATGAAGAATGGGC...CATGTCCCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CCA 90 bp GAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGTGAGATGGTGTCACTaGGGTGGGACTTGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: EREATAWFSSIQWRRDSVVRWCH*GGTCWP
Trigger: GGGCCAACAAGTCCCACCCCAGTGACACCATCTCAC...TACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp AGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGCCTGGGGCGAAGGCATaGGCCAGGAGTCCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: SRVNRGTITMWAEMHCAVPGAKA*ARSPSL
Trigger: TAAGGACGGACTCCTGGCTCATGCCTTCGCCCCAGG...CACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR TCA 90 bp ATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCGGTGGGGCTGGGCAGTaGCCAGTCATCGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: MWAEMHCAVTSDNLSPSVGGAGQ*PVIGFS
Trigger: TGAGAACCCGATGACTGGTCACTGCCCAGCCCCACC...GACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR GCA 90 bp AGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGTGGCCACATCTGGGTTaGCGCAGCGTGGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: SRVNRGTITMWAEMHCAVWPHLG*RSVASA
Trigger: TGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCA...CACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGATGTCCCACTTGGGCTTaGGAGGGAAGAAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRCPTWA*EGRSCS
Trigger: ACTACAACTTCTTCCCTCGCAAGCCCAAGTGGGACA...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCACAAGAAGGGGAACTTaGAGTACTCCCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRATRRGT*STPHRR
Trigger: ACGCCGATGGGGAGTACTGCAAGTTCCCCTTCTTGT...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp TCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAACAAGAAGGGGAACTTaGAGTACTCCCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: SGSFSSSPGPVYRRQWRGTRRGT*STPHRR
Trigger: ACGCCGATGGGGAGTACTGCAAGTTCCCCTTCTTGT...TCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCAGCGGAATGGAAACTTaGAGGGCTGTCCTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRASGMET*RAVLQR
Trigger: ACGCTGAAGGACAGCCCTGCAAGTTTCCATTCCGCT...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp TGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGGTTGCAGCTCTCCTTaGGGCAGCCATAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: WEEYSQHLFLGTGRSHSLGCSSP*GSHRRC
Trigger: ACACCTTCTATGGCTGCCCCAAGGAGAGCTGCAACC...CAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAAGCGTGGCTTCCGCATaGTCTCGATGGTATTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGPSLVLQARCIEGSGEESVASA*SRWYSG
Trigger: ACCAGAATACCATCGAGACCATGCGGAAGCCACGCT...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGTTCTTGTCCCACTTaGGCTTGCGAGGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PGPSLVLQARCIEGSGEEGSCPT*ACEGRS
Trigger: ACTTCTTCCCTCGCAAGCCCAAGTGGGACAAGAACC...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGGTTCTTGTCCCACTTaGGCTTGCGAGGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRGSCPT*ACEGRS
Trigger: ACTTCTTCCCTCGCAAGCCCAAGTGGGACAAGAACC...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCATCATCCACTGTCTCTaGGTCCAGATCAGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSIIHCL*VQIRCV
Trigger: TACACACCTGATCTGGACCCAGAGACAGTGGATGAT...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGACATCGCTCCAGACTTaGAAGGCACGAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRTSLQT*KARAKA
Trigger: TGCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGT...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGTTCACACGGACCACTTaGCCTTCTCCCAAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVFTRTT*PSPKVH
Trigger: ATGGACCTTGGGAGAAGGCCAAGTGGTCCGTGTGAA...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGACAAAGTTGTAGGTGGTaGAGCACCAGAGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRQSCRW*STRGSH
Trigger: ATGGCTTCCTCTGGTGCTCCACCACCTACAACTTTG...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGATCTCAAAGTTGTAGGTaGTGGAGCACCAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRSQSCR*WSTRGS
Trigger: GCTTCCTCTGGTGCTCCACCACCTACAACTTTGAGA...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGGTGAACAGGGCTTCATaGGGACAGAAGCCGTACTTG +
Preference number: 4 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGVNRAS*GQKPYL
Trigger: CAAGTACGGCTTCTGTCCCCATGAAGCCCTGTTCAC...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGGGTCATCATCGTAGTTaGCTGTGGTCGCACACCACA +
Preference number: 4 (lower is better)
Translates to: AGSHGLVFLHPVEKRLGRGHHRS*LWSHTT
Trigger: TGTGGTGTGCGACCACAGCCAACTACGATGATGACC...CCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTCATGGGCTTGTCACGTaGCGTCACAGTCCGCCAAAT +
Preference number: 4 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACHGLVT*RHSPPN
Trigger: ATTTGGCGGACTGTGACGCCACGTGACAAGCCCATG...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CAGAAGGTTGTGAAAGGAGAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCACATGGGCTTGTCACGTaGCGTCACAGTCCGCCAAAT +
Preference number: 4 (lower is better)
Translates to: QKVVKGEEPEVWQHQGSPHGLVT*RHSPPN
Trigger: ATTTGGCGGACTGTGACGCCACGTGACAAGCCCATG...TGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTCTCCTTTCACAACCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGCTCGCTCCAGGGTGCTaGCTGAGTAGATCCAGTATT +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVLAPGC*LSRSSI
Trigger: AATACTGGATCTACTCAGCCAGCACCCTGGAGCGAG...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp ACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTGGCTGGTCAGTGGCTTaGGGTACCCTCGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TITMWAEMHCAVTSDNLSGWSVA*GTLAPG
Trigger: CCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCC...ACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AAAGGAGAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCGGAACCATCACTATGTaGGCTGAGATGCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: KGEEPEVWQHQGSPKQGCGTITM*AEMHCA
Trigger: TGCACAGTGCATCTCAGCCCACATAGTGATGGTTCC...GCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTCTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGATTTTCCTCCATCCAGTaGAGAAGAGACTCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRFSSIQ*RRDSVG
Trigger: CCCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAA...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR CCA 90 bp AAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGATAATACTCCCAGCATaGGAGTCATCCAGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: KGRLGGVQSASILGHREEIILPA*ESSRPS
Trigger: AGAGGGCCTGGATGACTCCCATGCTGGGAGTATTAT...CTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCCTAGCCAGTCGGATTTaGTGCTTCCAAACTTCACGC +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRALASRI*CFQTSR
Trigger: GCGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAG...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTCTAGCCAGTCGGATTTaGTGCTTCCAAACTTCACGC +
Preference number: 4 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPLASRI*CFQTSR
Trigger: GCGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAG...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp CGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAAAGCAGGGCTGCGTTaGAAATATCAAAGTATCTCT +
Preference number: 4 (lower is better)
Translates to: RLPGPSGSFSSSPGPVYRKAGLR*KYQSIS
Trigger: AGAGATACTTTGATATTTTCAACGCAGCCCTGCTTT...TCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR TCA 90 bp TCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGCCACAGAAGGTTGTaGAAGGAGAAGAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SGSFSSSPGPVYRRQWRGSHRRL*KEKSLK
Trigger: CTTCAGGCTCTTCTCCTTTCACAACCTTCTGTGGCT...TCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp GAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCAGTCCAAAGAACTTCTaGATCTTCTTTAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: ELKARLPGPSGSFSSSPGSPKNF*IFFSVS
Trigger: GGACACACTAAAGAAGATGCAGAAGTTCTTTGGACT...GCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTTGTCCCACTTGGGCTTaGGAGGGAAGAAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPCPTWA*EGRSCS
Trigger: ACTACAACTTCTTCCCTCGCAAGCCCAAGTGGGACA...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCGTTGATCATGATGTCTaGCTCTCCATCATGGATTCG +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSVDHDV*LSIMDS
Trigger: CGAATCCATGATGGAGAGGCAGACATCATGATCAAC...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp GGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAAGCGGAATGGAAACTTaGAGGGCTGTCCTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: GGVQSASILGHREEPLSGSGMET*RAVLQR
Trigger: ACGCTGAAGGACAGCCCTGCAAGTTTCCATTCCGCT...TCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp TGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGAGCGGAATGGAAACTTaGAGGGCTGTCCTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: WEEYSQHLFLGTGRSHSLSGMET*RAVLQR
Trigger: ACGCTGAAGGACAGCCCTGCAAGTTTCCATTCCGCT...CAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp GATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAAAGCGGTAGCCATCCGTaGGGCCCTCAGTGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DALCSDFRQPESFCQEMQSGSHP*GPQWCS
Trigger: GCTGCACCACTGAGGGCCGCACGGATGGCTACCGCT...TTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp TTGCTGATTCTTCAGGGCTCTTTCTACAGGACAGAGGGACTAGAGCTTACTCTCCCAGGGTCTTGGGAGTaGTCCAGCCCCATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LLILQGSFYRTEGLELTLPGSWE*SSPMAW
Trigger: CCACGCCATGGGGCTGGAGCACTCCCAAGACCCTGG...GAGAGTAAGCTCTAGTCCCTCTGTCCTGTAGAAAGAGCCCTGAAGAATCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp TCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGTCAAGATCACCTGTCTaGGGCAGTCCAAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: SSSPGPVYRRQWRGRACGSRSPV*GSPKNF
Trigger: GAAGTTCTTTGGACTGCCCCAGACAGGTGATCTTGA...CCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGGAGGGCTGAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGATCAAGATCACCTGTCTaGGGCAGTCCAAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: GRAEREATAWFSSIQWRRSRSPV*GSPKNF
Trigger: GAAGTTCTTTGGACTGCCCCAGACAGGTGATCTTGA...TCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTCAGCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTTCCGCATGGTCTCGATaGTATTCTGGTCAAGATCAC +
Preference number: 4 (lower is better)
Translates to: APGRSTVSIYSWAPGGATSAWSR*YSGQDH
Trigger: GTGATCTTGACCAGAATACCATCGAGACCATGCGGA...AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp TCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGATCCTGTATGTGATCTaGTTCTTGTCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: SSSPGPVYRRQWRGRACGILYVI*FLSHLG
Trigger: GCCCAAGTGGGACAAGAACCAGATCACATACAGGAT...CCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGATCATCCACTGTCTCTaGGTCCAGATCAGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEIIHCL*VQIRCV
Trigger: TACACACCTGATCTGGACCCAGAGACAGTGGATGAT...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp AAAGGAGAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCATCATCCACTGTCTCTaGGTCCAGATCAGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: KGEEPEVWQHQGSPKQGCIIHCL*VQIRCV
Trigger: TACACACCTGATCTGGACCCAGAGACAGTGGATGAT...GCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAACATCGCTCCAGACTTaGAAGGCACGAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GGVQSASILGHREEPLSGTSLQT*KARAKA
Trigger: TGCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGT...TCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp ATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGTAGGACCCAACACCAGTGCCTaGGGCGAAGGCATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ILGHREEPLSGILNYQVGPNTSA*GEGMSQ
Trigger: CTGGCTCATGCCTTCGCCCCAGGCACTGGTGTTGGG...TCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGATCATCGTCATCAAAATaGGAGTCTCCCCCAACACCA +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGSSSSK*ESPPTP
Trigger: TGGTGTTGGGGGAGACTCCCATTTTGATGACGATGA...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGCAAAGTTGTAGGTGGTaGAGCACCAGAGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVQSCRW*STRGSH
Trigger: ATGGCTTCCTCTGGTGCTCCACCACCTACAACTTTG...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGTCTCAAAGTTGTAGGTaGTGGAGCACCAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AGSHGLVFLHPVEKRLGRSQSCR*WSTRGS
Trigger: GCTTCCTCTGGTGCTCCACCACCTACAACTTTGAGA...CCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAATCTCAAAGTTGTAGGTaGTGGAGCACCAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGPSLVLQARCIEGSGEESQSCR*WSTRGS
Trigger: GCTTCCTCTGGTGCTCCACCACCTACAACTTTGAGA...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCATCGTAGTTGGCTGTaGTCGCACACCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGHRSWL*SHTTSF
Trigger: GAAAGATGTGGTGTGCGACCACAGCCAACTACGATG...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTAAGGGCCCCAGGGTCTTaGGAGTGCTCCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLRAPGS*ECSSPM
Trigger: CATGGGGCTGGAGCACTCCCAAGACCCTGGGGCCCT...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCCTTGATGTCATCCTaGGACAGACGGAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGPLMSS*DRRKFL
Trigger: CAAGAACTTCCGTCTGTCCCAGGATGACATCAAGGG...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGTCCCAGGCTGGTCAGTaGCTTGGGGTACCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: ASILGHREEPLSGILNYQSQAGQ*LGVPSL
Trigger: GAGCGAGGGTACCCCAAGCCACTGACCAGCCTGGGA...CTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp TTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGGGGGCAGTCCCAGGCTaGTCAGTGGCTTGGGGTACC +
Preference number: 4 (lower is better)
Translates to: LFILVDISHGEWLKGGAGGAVPG*SVAWGT
Trigger: GGTACCCCAAGCCACTGACCAGCCTGGGACTGCCCC...CCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGTCTGCAAAAGTGAGATaGTGTCACTGGGGTGGGACT +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVSAKVR*CHWGGT
Trigger: AGTCCCACCCCAGTGACACCATCTCACTTTTGCAGA...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAATCTCACCACGGATCTaGGCGATGCCATCAAATACA +
Preference number: 4 (lower is better)
Translates to: PGPSLVLQARCIEGSGEEISPRI*AMPSNT
Trigger: TGTATTTGATGGCATCGCTCAGATCCGTGGTGAGAT...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR TCA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGATCTCACCACGGATCTaGGCGATGCCATCAAATACA +
Preference number: 4 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGISPRI*AMPSNT
Trigger: TGTATTTGATGGCATCGCTCAGATCCGTGGTGAGAT...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR TCA 90 bp GGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGACTCCAGGGTGCTGGCTaGGTAGATCCAGTATTCATT +
Preference number: 4 (lower is better)
Translates to: GGVQSASILGHREEPLSGLQGAG*VDPVFI
Trigger: AATGAATACTGGATCTACTCAGCCAGCACCCTGGAG...TCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR TCA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTCTCCAGGGTGCTGGCTaGGTAGATCCAGTATTCATT +
Preference number: 4 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACLQGAG*VDPVFI
Trigger: AATGAATACTGGATCTACTCAGCCAGCACCCTGGAG...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR TCA 90 bp AGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCCACCAGTGCCCTCTTaGGACAGTCTCCATTGGCTC +
Preference number: 4 (lower is better)
Translates to: RGTITMWAEMHCAVTSDNPPVPS*DSLHWL
Trigger: GAGCCAATGGAGACTGTCTCAAGAGGGCACTGGTGG...GTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR TCA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGTTACTTTGGAAGCTCTaGCCTTTCCAGCAGACACCA +
Preference number: 4 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRLLWKL*PFQQTP
Trigger: TGGTGTCTGCTGGAAAGGTCAGAGCTTCCAAAGTAA...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR GCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGTTGATCATGATGTCTaGCTCTCCATCATGGATTCG +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRVDHDV*LSIMDS
Trigger: CGAATCCATGATGGAGAGGCAGACATCATGATCAAC...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGTTGATCATGATGTCTaGCTCTCCATCATGGATTCG +
Preference number: 4 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEVDHDV*LSIMDS
Trigger: CGAATCCATGATGGAGAGGCAGACATCATGATCAAC...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp AGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCACTCCCCCAACACCAGTaGCTGGGGCGAAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SIYSWAPGGATLWNLKLPLPQHQ*LGRRHE
Trigger: CTCATGCCTTCGCCCCAGGCACTGGTGTTGGGGGAG...TGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp GAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGACAGAAGCCGTACTTaGCATCCTTCTCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: EGAPGRSTVSIYSWAPGGDRSRT*HPSQSC
Trigger: ACAACTTTGAGAAGGATGGCAAGTACGGCTTCTGTC...TCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp TCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGGACAGAAGCCGTACTTaGCATCCTTCTCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSSPGPVYRRQWRGRACGDRSRT*HPSQSC
Trigger: ACAACTTTGAGAAGGATGGCAAGTACGGCTTCTGTC...CCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCTTTTTCTCCCACGTTTaGATAATACTCCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSFFSHV*IILPAW
Trigger: CCATGCTGGGAGTATTATGCAAACGTGGGAGAAAAA...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CCA 90 bp GCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGTCCGCATGGTCTCGATaGTATTCTGGTCAAGATCAC +
Preference number: 4 (lower is better)
Translates to: AGSHGLVFLHPVEKRLGRSAWSR*YSGQDH
Trigger: GTGATCTTGACCAGAATACCATCGAGACCATGCGGA...CCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGTCCGCATGGTCTCGATaGTATTCTGGTCAAGATCAC +
Preference number: 4 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGSAWSR*YSGQDH
Trigger: GTGATCTTGACCAGAATACCATCGAGACCATGCGGA...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGGGTTGCCGCAGCGTaGCTTCCGCATGGTCTCGAT +
Preference number: 4 (lower is better)
Translates to: DMLSRVNRGTITMWAEMHWVAAA*LPHGLD
Trigger: ATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCA...GTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCATCCTGTATGTGATCTaGTTCTTGTCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRAILYVI*FLSHLG
Trigger: GCCCAAGTGGGACAAGAACCAGATCACATACAGGAT...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGTCTGCCTCTCCATCATaGATTCGAGAAAACCGCAGT +
Preference number: 4 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGSASPS*IRENRS
Trigger: ACTGCGGTTTTCTCGAATCCATGATGGAGAGGCAGA...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp AGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACGCCCTGGAAGCGGAATaGAAACTTGCAGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RGTITMWAEMHCAVTSDNALEAE*KLAGLS
Trigger: GGACAGCCCTGCAAGTTTCCATTCCGCTTCCAGGGC...GTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp ATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGTAGGACCGTGCGGCCCTCAGTaGTGCAGCTGTCATAGGATG +
Preference number: 4 (lower is better)
Translates to: ILGHREEPLSGILNYQVGPCGPQ*CSCHRM
Trigger: CATCCTATGACAGCTGCACCACTGAGGGCCGCACGG...TCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGCCGTGCGGCCCTCAGTaGTGCAGCTGTCATAGGATG +
Preference number: 4 (lower is better)
Translates to: ASILGHREEPLSGILNYQPCGPQ*CSCHRM
Trigger: CATCCTATGACAGCTGCACCACTGAGGGCCGCACGG...CTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGCACCAACAGTGGACATaGCGGTCTCAGGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SRVNRGTITMWAEMHCAVHQQWT*RSQGRS
Trigger: GCTTCTGCCCTGAGACCGCCATGTCCACTGTTGGTG...CACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGAGTTCCCACCAACAGTaGACATGGCGGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SRVNRGTITMWAEMHCAVSSHQQ*TWRSQG
Trigger: GCCCTGAGACCGCCATGTCCACTGTTGGTGGGAACT...CACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTCATCGTAGTTGGCTGTaGTCGCACACCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACHRSWL*SHTTSF
Trigger: GAAAGATGTGGTGTGCGACCACAGCCAACTACGATG...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAACAGACGGAAGTTCTTaGTGTAGGTGTAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRTDGSS*CRCKWV
Trigger: CACCCATTTACACCTACACCAAGAACTTCCGTCTGT...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTCCCTTGATGTCATCCTaGGACAGACGGAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACPLMSS*DRRKFL
Trigger: CAAGAACTTCCGTCTGTCCCAGGATGACATCAAGGG...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp AGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGGGGAAGGGGCGCCTaGGAGGAGTACAGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SIYSWAPGGATLWNLKLPGGRGA*EEYSQH
Trigger: ATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC...TGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACGGTGGCTCTGAGGGTTaGTGGGATTGGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: DMLSRVNRGTITMWAEMHGGSEG*WDWRGK
Trigger: CTTCCCCCTCCAATCCCACCAACCCTCAGAGCCACC...GTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGCCACTGCATTGCCTCTaGACAACACAGACTTCCATT +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVPLHCL*TTQTSI
Trigger: AATGGAAGTCTGTGTTGTCCAGAGGCAATGCAGTGG...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437642.6
CDS-3UTR CCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGTCATCGGGTTCTCAATaGAGATGGAGTATCCACTGC +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVSSGSQ*RWSIHC
Trigger: GCAGTGGATACTCCATCTCCATTGAGAACCCGATGA...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CCA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCATTACTGTAGCTATCTaGCTTGCCCATTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSITVAI*LAHSSS
Trigger: GGATGAAGAATGGGCAAGCCAGATAGCTACAGTAAT...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CCA 90 bp ACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTATGGTGTCACTGGGGTaGGACTTGTTGGCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TITMWAEMHCAVTSDNLSMVSLG*DLLAPG
Trigger: CCCAGGGGCCAACAAGTCCCACCCCAGTGACACCAT...ACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp TGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGTGTACTCCTTGCCATTaGACAAGAAGGGGAACTTGC +
Preference number: 4 (lower is better)
Translates to: WEEYSQHLFLGTGRSHSLCTPCH*TRRGTC
Trigger: GCAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACA...CAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR TCA 90 bp ACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCACCAGTGCCCTCTTaGGACAGTCTCCATTGGCTC +
Preference number: 4 (lower is better)
Translates to: TITMWAEMHCAVTSDNLSPPVPS*DSLHWL
Trigger: GAGCCAATGGAGACTGTCTCAAGAGGGCACTGGTGG...ACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp AGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGTCAGCACAAACAGGTTaGAGCTCTCCTTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRVNRGTITMWAEMHCAVSAQTG*SSPWGS
Trigger: GCTGCCCCAAGGAGAGCTGCAACCTGTTTGTGCTGA...CACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp GACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACGGCATTCCAGGCATCTaGGATGAGCTTGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: DMLSRVNRGTITMWAEMHGIPGI*DELGEA
Trigger: GGCTTCCCCAAGCTCATCGCAGATGCCTGGAATGCC...GTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp AAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGAGCCCAAAGCAGGGCTaGGTTGAAAATATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: KGRLGGVQSASILGHREESPKQG*VENIKV
Trigger: TACTTTGATATTTTCAACGCAGCCCTGCTTTGGGCT...CTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGTGACACGTGAAAAGTaGCTTGCACATAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRVTREK*LAHRKH
Trigger: GTGCTTTCTATGTGCAAGGCACTTTTCACGTGTCAC...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp AGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGGGTTGCAGCTCTCCTTaGGGCAGCCATAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SRVNRGTITMWAEMHCAVGCSSP*GSHRRC
Trigger: ACACCTTCTATGGCTGCCCCAAGGAGAGCTGCAACC...CACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGATCCTGTATGTGATCTaGTTCTTGTCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: WEEYSQHLFLGTGRSHSLILYVI*FLSHLG
Trigger: GCCCAAGTGGGACAAGAACCAGATCACATACAGGAT...CAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp ATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGTAGGAGCCCTGGAAGCGGAATaGAAACTTGCAGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ILGHREEPLSGILNYQVGALEAE*KLAGLS
Trigger: GGACAGCCCTGCAAGTTTCCATTCCGCTTCCAGGGC...TCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAGTTCCCACCAACAGTaGACATGGCGGTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: EMHCAVTSDNLSPSVRKCSSHQQ*TWRSQG
Trigger: GCCCTGAGACCGCCATGTCCACTGTTGGTGGGAACT...GCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCACAGACGGAAGTTCTTaGTGTAGGTGTAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRATDGSS*CRCKWV
Trigger: CACCCATTTACACCTACACCAAGAACTTCCGTCTGT...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CCA 90 bp CTCCATCCAGTGGAGAAGAGACTCGGTAGGGACATGCTAAGTAGAGTGAACAGGCCAGGTTATCGGGGATaGCATTCCAGGCATCTGCGA +
Preference number: 4 (lower is better)
Translates to: LHPVEKRLGRDMLSRVNRPGYRG*HSRHLR
Trigger: TCGCAGATGCCTGGAATGCCATCCCCGATAACCTGG...CCTGTTCACTCTACTTAGCATGTCCCTACCGAGTCTCTTCTCCACTGGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGGAGGAGCCACTCTCTaGAATCTTAAATTACCAGGT +
Preference number: 4 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRGGATL*NLKLPG
Trigger: ACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCC...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GAGAAGAGACTCGGTAGGGACATGCTAAGTAGAGTGAACAGGGGAACCATCACTGGGCTGGGCAGTCCATaGGGCCTCTTGACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: EKRLGRDMLSRVNRGTITGLGSP*GLLTFR
Trigger: TCTGAAAGTCAAGAGGCCCCATGGACTGCCCAGCCC...AGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTCCCTACCGAGTCTCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTAACAGGGGGCACCTTCTaGGTTCCCACCAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLTGGTF*VPTNSG
Trigger: TCCACTGTTGGTGGGAACTCAGAAGGTGCCCCCTGT...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR TCA 90 bp GATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAAGAAAGGAGAAGAGCCTaGAGTGTGGCAGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: DALCSDFRQPESFCQEMQERRRA*SVAAPG
Trigger: CCCTGGTGCTGCCACACTTCAGGCTCTTCTCCTTTC...TTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR TCA 90 bp AGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACGCTCCAAGGGTTCTGTaGGCCACAGAAGGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RGTITMWAEMHCAVTSDNAPRVL*ATEGCE
Trigger: TTCACAACCTTCTGTGGCTCACAGAACCCTTGGAGC...GTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR TCA 90 bp ATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCCATCACTATGTGGGCTaGGATGCACTGTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: MWAEMHCAVTSDNLSPSVHHYVG*DALCSD
Trigger: GTCACTGCACAGTGCATCTCAGCCCACATAGTGATG...GACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp AACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACCATCACTATGTGGGCTaGGATGCACTGTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: NRGTITMWAEMHCAVTSDHHYVG*DALCSD
Trigger: GTCACTGCACAGTGCATCTCAGCCCACATAGTGATG...GTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp AGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGCATCACTATGTGGGCTaGGATGCACTGTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SRVNRGTITMWAEMHCAVHHYVG*DALCSD
Trigger: GTCACTGCACAGTGCATCTCAGCCCACATAGTGATG...CACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp GAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGACTTTCAGAGTAAGTaGACTACTGGTCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: EREATAWFSSIQWRRDSVDFQSK*TTGPGT
Trigger: TGTACCTGGACCAGTAGTTCACTTACTCTGAAAGTC...TACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR GCA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAAGTCCAAAGAACTTCTaGATCTTCTTTAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGSPKNF*IFFSVS
Trigger: GGACACACTAAAGAAGATGCAGAAGTTCTTTGGACT...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp GCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGTGCGGCCGGTATCAGTaGAGCTGTTGTACTCCTTGC +
Preference number: 4 (lower is better)
Translates to: ASILGHREEPLSGILNYQCGRYQ*SCCTPC
Trigger: GCAAGGAGTACAACAGCTGCACTGATACCGGCCGCA...CTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp TGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGACAGAAGCCGTACTTaGCATCCTTCTCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: WEEYSQHLFLGTGRSHSLDRSRT*HPSQSC
Trigger: ACAACTTTGAGAAGGATGGCAAGTACGGCTTCTGTC...CAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp TTGCTGATTCTTCAGGGCTCTTTCTACAGGACAGAGGGACTAGAGCTTACTCTCTGCGGCCGGCGCTGGTaGAGCTCTCATATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LLILQGSFYRTEGLELTLCGRRW*SSHICC
Trigger: GCAACAAATATGAGAGCTGCACCAGCGCCGGCCGCA...GAGAGTAAGCTCTAGTCCCTCTGTCCTGTAGAAAGAGCCCTGAAGAATCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR GCA 90 bp AGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCATGCGGCCGGCGCTGGTaGAGCTCTCATATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SIYSWAPGGATLWNLKLPCGRRW*SSHICC
Trigger: GCAACAAATATGAGAGCTGCACCAGCGCCGGCCGCA...TGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp GACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACGGCAGAAGCCCCACTTaGGGTCATCATCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: DMLSRVNRGTITMWAEMHGRSPT*GHHRSW
Trigger: CCAACTACGATGATGACCGCAAGTGGGGCTTCTGCC...GTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp ATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGTAGGAGGCAGAAGCCCCACTTaGGGTCATCATCGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: ILGHREEPLSGILNYQVGGRSPT*GHHRSW
Trigger: CCAACTACGATGATGACCGCAAGTGGGGCTTCTGCC...TCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTAGCCAAACTCGTGGGCTaGCACGAGGAACAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLAKLVG*HEEQAV
Trigger: TACAGCCTGTTCCTCGTGGCAGCCCACGAGTTTGGC...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp TCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGCCCAAAGCAGGGCTaGGTTGAAAATATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: SGSFSSSPGPVYRRQWRGSPKQG*VENIKV
Trigger: TACTTTGATATTTTCAACGCAGCCCTGCTTTGGGCT...TCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp TTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGAGGCTCACCCTCTTTCTCTaGCACATTCCACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FILVDISHGEWLKGGAGRLTLFL*HIPQQL
Trigger: CAGCTGCTGTGGAATGTGGCAGAGAAAGAGGGTGAG...CCTCCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CCA 90 bp GACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACGGTTGCAGCTCTCCTTaGGGCAGCCATAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: DMLSRVNRGTITMWAEMHGCSSP*GSHRRC
Trigger: ACACCTTCTATGGCTGCCCCAAGGAGAGCTGCAACC...GTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGGACATGTCATCGTCATCAAAATaGGAGTCTCCCCCAACACCA +
Preference number: 4 (lower is better)
Translates to: SHGLVFLHPVEKRLGRDMSSSSK*ESPPTP
Trigger: TGGTGTTGGGGGAGACTCCCATTTTGATGACGATGA...CATGTCCCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGCCCTGGAAGCGGAATaGAAACTTGCAGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SIYSWAPGGATLWNLKLPALEAE*KLAGLS
Trigger: GGACAGCCCTGCAAGTTTCCATTCCGCTTCCAGGGC...TGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp TTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGCACTGCGGCCGGCGCTaGTGCAGCTCTCATATTTGT +
Preference number: 4 (lower is better)
Translates to: LFILVDISHGEWLKGGAGHCGRR*CSSHIC
Trigger: ACAAATATGAGAGCTGCACCAGCGCCGGCCGCAGTG...CCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGACAGACGGAAGTTCTTaGTGTAGGTGTAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: WEEYSQHLFLGTGRSHSLTDGSS*CRCKWV
Trigger: CACCCATTTACACCTACACCAAGAACTTCCGTCTGT...CAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTAAGCCTTCTCCTCCTGTaGGGCCTCGTATACCGCATC +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLSLLLL*GLVYRI
Trigger: GATGCGGTATACGAGGCCCCACAGGAGGAGAAGGCT...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp ACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAAAGCGGTCGAGGGTGGGGCTaGGCAGTGACCAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: TKQTANVRKVLRQPAVKSGRGWG*AVTSHR
Trigger: CCGATGACTGGTCACTGCCCAGCCCCACCCTCGACC...GCTTTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR GCA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGAGTCCAAAGAACTTCTaGATCTTCTTTAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVSPKNF*IFFSVS
Trigger: GGACACACTAAAGAAGATGCAGAAGTTCTTTGGACT...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCAGTCCAAAGAACTTCTaGATCTTCTTTAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRASPKNF*IFFSVS
Trigger: GGACACACTAAAGAAGATGCAGAAGTTCTTTGGACT...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR GCA 90 bp AGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACTGTCCCACTTGGGCTTaGGAGGGAAGAAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RGTITMWAEMHCAVTSDNCPTWA*EGRSCS
Trigger: ACTACAACTTCTTCCCTCGCAAGCCCAAGTGGGACA...GTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp GATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAATGCGGCCGGTATCAGTaGAGCTGTTGTACTCCTTGC +
Preference number: 4 (lower is better)
Translates to: DALCSDFRQPESFCQEMQCGRYQ*SCCTPC
Trigger: GCAAGGAGTACAACAGCTGCACTGATACCGGCCGCA...TTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp GCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGAGCGGAATGGAAACTTaGAGGGCTGTCCTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: ASILGHREEPLSGILNYQSGMET*RAVLQR
Trigger: ACGCTGAAGGACAGCCCTGCAAGTTTCCATTCCGCT...CTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp GGAGGGCTGAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGCAAACCTCGAACAGATaGCACAATAAAGCAACAAAA +
Preference number: 4 (lower is better)
Translates to: GGLSGKPRLGFPPSSGEEQTSNR*HNKATK
Trigger: TTTTGTTGCTTTATTGTGGCATCTGTTCGAGGTTTG...CTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTCAGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CCA 90 bp GACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACACATCGCTCCAGACTTaGAAGGCACGAGCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: DMLSRVNRGTITMWAEMHTSLQT*KARAKA
Trigger: TGCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGT...GTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTATCGAGAAAACCGCAGTaGGGTCACATCGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLSRKPQ*GHIAPD
Trigger: GTCTGGAGCGATGTGACCCCACTGCGGTTTTCTCGA...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACCAAAGTTGTAGGTGGTaGAGCACCAGAGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: NRGTITMWAEMHCAVTSDQSCRW*STRGSH
Trigger: ATGGCTTCCTCTGGTGCTCCACCACCTACAACTTTG...GTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACTCTCAAAGTTGTAGGTaGTGGAGCACCAGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: NRGTITMWAEMHCAVTSDSQSCR*WSTRGS
Trigger: GCTTCCTCTGGTGCTCCACCACCTACAACTTTGAGA...GTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACCATCGTAGTTGGCTGTaGTCGCACACCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: NRGTITMWAEMHCAVTSDHRSWL*SHTTSF
Trigger: GAAAGATGTGGTGTGCGACCACAGCCAACTACGATG...GTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGAGGCCCTTGATGTCATCCTaGGACAGACGGAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: FILVDISHGEWLKGGAGRPLMSS*DRRKFL
Trigger: CAAGAACTTCCGTCTGTCCCAGGATGACATCAAGGG...CCTCCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAAGTCAGCATCTATTCTTaGGCACCGGGAGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: DALCSDFRQPESFCQEMQVSIYS*APGGAT
Trigger: AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC...TTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp ACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAAAGCTCTGGAGTGGCCACCTaGCCATGCCCTGTCCCACTG +
Preference number: 4 (lower is better)
Translates to: TKQTANVRKVLRQPAVKSSGVAT*PCPVPL
Trigger: CAGTGGGACAGGGCATGGCCAGGTGGCCACTCCAGA...GCTTTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp ACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTTGTCATCAGGAGGCCTaGGTTCTCCTAGCTGCACTT +
Preference number: 4 (lower is better)
Translates to: TITMWAEMHCAVTSDNLSCHQEA*VLLAAL
Trigger: AAGTGCAGCTAGGAGAACCCAGGCCTCCTGATGACA...ACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp GTGTCTTTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGACAGGGGGCACCTTCTaGGTTCCCACCAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: VSLFILVDISHGEWLKGGTGGTF*VPTNSG
Trigger: TCCACTGTTGGTGGGAACTCAGAAGGTGCCCCCTGT...CCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAAAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR TCA 90 bp AGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACATCTCACCACGGATCTaGGCGATGCCATCAAATACA +
Preference number: 4 (lower is better)
Translates to: RGTITMWAEMHCAVTSDNISPRI*AMPSNT
Trigger: TGTATTTGATGGCATCGCTCAGATCCGTGGTGAGAT...GTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR TCA 90 bp GAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCCTAGCCAGTCGGATTTaGTGCTTCCAAACTTCACGC +
Preference number: 4 (lower is better)
Translates to: EMHCAVTSDNLSPSVRKCLASRI*CFQTSR
Trigger: GCGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAG...GCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp ACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCTAGCCAGTCGGATTTaGTGCTTCCAAACTTCACGC +
Preference number: 4 (lower is better)
Translates to: TITMWAEMHCAVTSDNLSLASRI*CFQTSR
Trigger: GCGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAG...ACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTAAAGCAGGGCTGCGTTaGAAATATCAAAGTATCTCT +
Preference number: 4 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACKAGLR*KYQSIS
Trigger: AGAGATACTTTGATATTTTCAACGCAGCCCTGCTTT...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR TCA 90 bp TGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGAAAGCAGGGCTGCGTTaGAAATATCAAAGTATCTCT +
Preference number: 4 (lower is better)
Translates to: WEEYSQHLFLGTGRSHSLKAGLR*KYQSIS
Trigger: AGAGATACTTTGATATTTTCAACGCAGCCCTGCTTT...CAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR TCA 90 bp GCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGTTTATTCATACTTGTTaGCATTTCCCATGGGGAATG +
Preference number: 4 (lower is better)
Translates to: AGSHGLVFLHPVEKRLGRFIHTC*HFPWGM
Trigger: CATTCCCCATGGGAAATGTCAACAAGTATGAATAAA...CCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp CAGAAGGTTGTGAAAGGAGAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAACAAAATTGCTaGTTCTTCAGGGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: QKVVKGEEPEVWQHQGSPKQQNC*FFRALS
Trigger: AGAAAGAGCCCTGAAGAATCAGCAATTTTGTTGCTT...TGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTCTCCTTTCACAACCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR GCA 90 bp CATACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAACTCCCCCAACACCAGTaGCTGGGGCGAAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: HTKQTANVRKVLRQPAVKLPQHQ*LGRRHE
Trigger: CTCATGCCTTCGCCCCAGGCACTGGTGTTGGGGGAG...TTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp GTGTCTTTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGTGCGGCCCTCAGTGGTaGAGCTGTCATAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: VSLFILVDISHGEWLKGGCGPQW*SCHRMC
Trigger: GCACATCCTATGACAGCTGCACCACTGAGGGCCGCA...CCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp CATCCAGTGGAGAAGAGACTCGGTAGGGACATGCTAAGTAGAGTGAACAGGGGATCCGCATGGTCTCGATaGTATTCTGGTCAAGATCAC +
Preference number: 4 (lower is better)
Translates to: HPVEKRLGRDMLSRVNRGSAWSR*YSGQDH
Trigger: GTGATCTTGACCAGAATACCATCGAGACCATGCGGA...TCCCCTGTTCACTCTACTTAGCATGTCCCTACCGAGTCTCTTCTCCACTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGAGCGTGGCTTCCGCATaGTCTCGATGGTATTCTGGT +
Preference number: 4 (lower is better)
Translates to: LFILVDISHGEWLKGGAGSVASA*SRWYSG
Trigger: ACCAGAATACCATCGAGACCATGCGGAAGCCACGCT...CCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTAGGAAGAAGTTGTAGTTaGCCACATCTGGGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLGRSCS*PHLGCR
Trigger: GCGGCAACCCAGATGTGGCCAACTACAACTTCTTCC...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTAGGTTCTTGTCCCACTTaGGCTTGCGAGGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLGSCPT*ACEGRS
Trigger: ACTTCTTCCCTCGCAAGCCCAAGTGGGACAAGAACC...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp TTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGAGGTCTGCCTCTCCATCATaGATTCGAGAAAACCGCAGT +
Preference number: 4 (lower is better)
Translates to: FILVDISHGEWLKGGAGRSASPS*IRENRS
Trigger: ACTGCGGTTTTCTCGAATCCATGATGGAGAGGCAGA...CCTCCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp ATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCTCTGCCTCTCCATCATaGATTCGAGAAAACCGCAGT +
Preference number: 4 (lower is better)
Translates to: MWAEMHCAVTSDNLSPSVSASPS*IRENRS
Trigger: ACTGCGGTTTTCTCGAATCCATGATGGAGAGGCAGA...GACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp AGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACTCATCGTCATCAAAATaGGAGTCTCCCCCAACACCA +
Preference number: 4 (lower is better)
Translates to: RGTITMWAEMHCAVTSDNSSSSK*ESPPTP
Trigger: TGGTGTTGGGGGAGACTCCCATTTTGATGACGATGA...GTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp TTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGGTGAACAGGGCTTCATaGGGACAGAAGCCGTACTTG +
Preference number: 4 (lower is better)
Translates to: LFILVDISHGEWLKGGAGVNRAS*GQKPYL
Trigger: CAAGTACGGCTTCTGTCCCCATGAAGCCCTGTTCAC...CCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAAGTGAACAGGGCTTCATaGGGACAGAAGCCGTACTTG +
Preference number: 4 (lower is better)
Translates to: DALCSDFRQPESFCQEMQVNRAS*GQKPYL
Trigger: CAAGTACGGCTTCTGTCCCCATGAAGCCCTGTTCAC...TTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp ATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGTAGGACATCGTAGTTGGCTGTaGTCGCACACCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: ILGHREEPLSGILNYQVGHRSWL*SHTTSF
Trigger: GAAAGATGTGGTGTGCGACCACAGCCAACTACGATG...TCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCGGAACCATCACTATGTaGGCTGAGATGCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: EMHCAVTSDNLSPSVRKCGTITM*AEMHCA
Trigger: TGCACAGTGCATCTCAGCCCACATAGTGATGGTTCC...GCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR CCA 90 bp GCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGTTTTCCTCCATCCAGTaGAGAAGAGACTCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: ASILGHREEPLSGILNYQFSSIQ*RRDSVG
Trigger: CCCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAA...CTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTAGGACTTGTTGGCCCCTaGGTCATACGATGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLGLVGP*VIRCSC
Trigger: ACAAGAGCATCGTATGACCCAGGGGCCAACAAGTCC...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CCA 90 bp AAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAAAGCCAGTGGGGTGGGACTTGTTaGCCCCTGGGTCATACGATG +
Preference number: 4 (lower is better)
Translates to: KQTANVRKVLRQPAVKSQWGGTC*PLGHTM
Trigger: CATCGTATGACCCAGGGGCCAACAAGTCCCACCCCA...CTGGCTTTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR TCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACTCCAGGGTGCTGGCTaGGTAGATCCAGTATTCATT +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLLQGAG*VDPVFI
Trigger: AATGAATACTGGATCTACTCAGCCAGCACCCTGGAG...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR TCA 90 bp TTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGCTAGCCAGTCGGATTTaGTGCTTCCAAACTTCACGC +
Preference number: 4 (lower is better)
Translates to: LFILVDISHGEWLKGGAGLASRI*CFQTSR
Trigger: GCGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAG...CCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp GAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTATTTATTCATACTTGTTaGCATTTCCCATGGGGAATG +
Preference number: 4 (lower is better)
Translates to: EREATAWFSSIQWRRDSVFIHTC*HFPWGM
Trigger: CATTCCCCATGGGAAATGTCAACAAGTATGAATAAA...TACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR TCA 90 bp ATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGTAGGAGGTTCATGCACTCTTTaGTTTGAAGCCAAGCGGTCT +
Preference number: 4 (lower is better)
Translates to: ILGHREEPLSGILNYQVGGSCTL*FEAKRS
Trigger: AGACCGCTTGGCTTCAAATCAAAGAGTGCATGAACC...TCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437642.6
CDS-3UTR GCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTATGTCCCACTTGGGCTTaGGAGGGAAGAAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLCPTWA*EGRSCS
Trigger: ACTACAACTTCTTCCCTCGCAAGCCCAAGTGGGACA...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR GCA 90 bp CATACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAAAGAGGAAGCCATCGCTaGGGCCGGTATCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HTKQTANVRKVLRQPAVKRGSHR*GRYQCS
Trigger: GCTGCACTGATACCGGCCGCAGCGATGGCTTCCTCT...TTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp AACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACTCCCTGAGGTTCTCTTaGTGTTTACTTTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: NRGTITMWAEMHCAVTSDSLRFS*CLLWKL
Trigger: GAGCTTCCAAAGTAAACAGCAAGAGAACCTCAGGGA...GTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR GCA 90 bp GAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAGATGGAGTATCCACTaGTGTGATGTAGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EMHCAVTSDNLSPSVRKCRWSIH*CDVESS
Trigger: GCTGGACTCTACATCACAGCAGTGGATACTCCATCT...GCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR GCA 90 bp GCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGCCCTGGGTCATACGATaGTCTTGTTTGTCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ASILGHREEPLSGILNYQPWVIR*SCLSVC
Trigger: ACAGACAGACAAACAAGAGCATCGTATGACCCAGGG...CTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR GCA 90 bp GAGAAGAGACTCGGTAGGGACATGCTAAGTAGAGTGAACAGGGGAACCATCACTTGCGAGCAAGAGCTCTaGAAAAGTGAGATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: EKRLGRDMLSRVNRGTITCEQEL*KSEMVS
Trigger: TGACACCATCTCACTTTTGCAGAGCTCTTGCTCGCA...AGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTCCCTACCGAGTCTCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR GCA 90 bp ATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAATCTGGGTTCTCCTAGCTaGACTTTGCGAGCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: MHCAVTSDNLSPSVRKCNLGSPS*TLRARA
Trigger: AGCTCTTGCTCGCAAAGTGCAGCTAGGAGAACCCAG...ATTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CCA 90 bp GACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTCAAGATCACCTGTCTaGGGCAGTCCAAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: DMLSRVNRGTITMWAEMHSRSPV*GSPKNF
Trigger: GAAGTTCTTTGGACTGCCCCAGACAGGTGATCTTGA...GTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGTCAAGATCACCTGTCTaGGGCAGTCCAAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: ASILGHREEPLSGILNYQSRSPV*GSPKNF
Trigger: GAAGTTCTTTGGACTGCCCCAGACAGGTGATCTTGA...CTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGATCCTGTATGTGATCTaGTTCTTGTCCCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: ASILGHREEPLSGILNYQILYVI*FLSHLG
Trigger: GCCCAAGTGGGACAAGAACCAGATCACATACAGGAT...CTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp AGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACGGAGGAGCCACTCTCTaGAATCTTAAATTACCAGGT +
Preference number: 4 (lower is better)
Translates to: RGTITMWAEMHCAVTSDNGGATL*NLKLPG
Trigger: ACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCC...GTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GTGTCTTTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGTCAGCATCTATTCTTaGGCACCGGGAGGAGCCACT +
Preference number: 4 (lower is better)
Translates to: VSLFILVDISHGEWLKGGVSIYS*APGGAT
Trigger: AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC...CCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAAAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTAGGAACCATCACTATGTaGGCTGAGATGCACTGTGCA +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLGTITM*AEMHCA
Trigger: TGCACAGTGCATCTCAGCCCACATAGTGATGGTTCC...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp CATCCAGTGGAGAAGAGACTCGGTAGGGACATGCTAAGTAGAGTGAACAGGGGAGTTCAGGTATTGCACTaGCAACTCTTTGTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: HPVEKRLGRDMLSRVNRGVQVLH*QLFVRF
Trigger: AAAACGGACAAAGAGTTGGCAGTGCAATACCTGAAC...TCCCCTGTTCACTCTACTTAGCATGTCCCTACCGAGTCTCTTCTCCACTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR GCA 90 bp ACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTGACAGAAGCCGTACTTaGCATCCTTCTCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: TITMWAEMHCAVTSDNLSDRSRT*HPSQSC
Trigger: ACAACTTTGAGAAGGATGGCAAGTACGGCTTCTGTC...ACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CCA 90 bp GTTCTCTTGCTGTTTACTTTGGAAGCTCTGACCTTTCCAGCAGACACCATCACCATCATCCACTGTCTCTaGGTCCAGATCAGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: VLLLFTLEALTFPADTITIIHCL*VQIRCV
Trigger: TACACACCTGATCTGGACCCAGAGACAGTGGATGAT...GGTGATGGTGTCTGCTGGAAAGGTCAGAGCTTCCAAAGTAAACAGCAAGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR TCA 90 bp ATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGTAGGAACTGGTCCAGGTACATaGAAGAAAAAGCTCTACTTC +
Preference number: 4 (lower is better)
Translates to: ILGHREEPLSGILNYQVGTGPGT*KKKLYF
Trigger: GAAGTAGAGCTTTTTCTTTCATGTACCTGGACCAGT...TCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CCA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTAACAGACGGAAGTTCTTaGTGTAGGTGTAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLTDGSS*CRCKWV
Trigger: CACCCATTTACACCTACACCAAGAACTTCCGTCTGT...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CCA 90 bp GATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAAGGAGGAGCCACTCTCTaGAATCTTAAATTACCAGGT +
Preference number: 4 (lower is better)
Translates to: DALCSDFRQPESFCQEMQGGATL*NLKLPG
Trigger: ACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCC...TTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR TCA 90 bp AGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGTTTATTCATACTTGTTaGCATTTCCCATGGGGAATG +
Preference number: 4 (lower is better)
Translates to: SRVNRGTITMWAEMHCAVFIHTC*HFPWGM
Trigger: CATTCCCCATGGGAAATGTCAACAAGTATGAATAAA...CACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR GCA 90 bp ATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAATGTTGATCATGATGTCTaGCTCTCCATCATGGATTCG +
Preference number: 4 (lower is better)
Translates to: MHCAVTSDNLSPSVRKCNVDHDV*LSIMDS
Trigger: CGAATCCATGATGGAGAGGCAGACATCATGATCAAC...ATTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp CATACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAAACAAGAAGGGGAACTTaGAGTACTCCCCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: HTKQTANVRKVLRQPAVKTRRGT*STPHRR
Trigger: ACGCCGATGGGGAGTACTGCAAGTTCCCCTTCTTGT...TTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR GCA 90 bp ATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAATAGCCCAAAGCAGGGCTaGGTTGAAAATATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: MHCAVTSDNLSPSVRKCNSPKQG*VENIKV
Trigger: TACTTTGATATTTTCAACGCAGCCCTGCTTTGGGCT...ATTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS CCA 90 bp CCGCGGCGCAGGGCTGCGCTCCGAGGGTCCGCTGGCTCGGTGGCCTaGGGTTTGCCCGGCTCAGCGGCTCATGGTCCGGCCCCCGCGCCC +
Preference number: 5 (lower is better)
Translates to: PRRRAALRGSAGSVA*GLPGSAAHGPAPAP
Trigger: GGGCGCGGGGGCCGGACCATGAGCCGCTGAGCCGGGCAAACCCCAGGCCACCGAGCCAGCGGACCCTCGGAGCGCAGCCCTGCGCCGCGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 90 bp CCGGGGGTCGCTGGCTCGGTGCGTGTGGCCGCCTCGCCGCCTGGTTaGAGCCTGCTCCGCGGCGCAGGGCTGCGCTCCGAGGGTCCGCTG +
Preference number: 5 (lower is better)
Translates to: PGVAGSVRVAASPPG*SLLRGAGLRSEGPL
Trigger: CAGCGGACCCTCGGAGCGCAGCCCTGCGCCGCGGAGCAGGCTCCAACCAGGCGGCGAGGCGGCCACACGCACCGAGCCAGCGACCCCCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 90 bp TCGCCCGGGGGTCGCTGGCTCGGTGCGTGTGGCCGCCTCGCCGCCTaGTTGGAGCCTGCTCCGCGGCGCAGGGCTGCGCTCCGAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SPGGRWLGACGRLAA*LEPAPRRRAALRGS
Trigger: GGACCCTCGGAGCGCAGCCCTGCGCCGCGGAGCAGGCTCCAACCAGGCGGCGAGGCGGCCACACGCACCGAGCCAGCGACCCCCGGGCGA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 90 bp CTGCTCCGCGGCGCAGGGCTGCGCTCCGAGGGTCCGCTGGCTCGGTaGCCTGGGGTTTGCCCGGCTCAGCGGCTCATGGTCCGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LLRGAGLRSEGPLAR*PGVCPAQRLMVRPP
Trigger: CGGGGGCCGGACCATGAGCCGCTGAGCCGGGCAAACCCCAGGCCACCGAGCCAGCGGACCCTCGGAGCGCAGCCCTGCGCCGCGGAGCAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS GCA 90 bp TCGCTGGCTCGGTGCGTGTGGCCGCCTCGCCGCCTGGTTGGAGCCTaGTCCGCGGCGCAGGGCTGCGCTCCGAGGGTCCGCTGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: SLARCVWPPRRLVGA*SAAQGCAPRVRWLG
Trigger: ACCGAGCCAGCGGACCCTCGGAGCGCAGCCCTGCGCCGCGGAGCAGGCTCCAACCAGGCGGCGAGGCGGCCACACGCACCGAGCCAGCGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 90 bp CTCCATCGTAGCGCTCCCTGGCCCCGCGCGTCGCCCGGGGGTCGCTaGCTCGGTGCGTGTGGCCGCCTCGCCGCCTGGTTGGAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LHRSAPWPRASPGGR*LGACGRLAAWLEPA
Trigger: AGCAGGCTCCAACCAGGCGGCGAGGCGGCCACACGCACCGAGCCAGCGACCCCCGGGCGACGCGCGGGGCCAGGGAGCGCTACGATGGAG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 90 bp GTTGGAGCCTGCTCCGCGGCGCAGGGCTGCGCTCCGAGGGTCCGCTaGCTCGGTGGCCTGGGGTTTGCCCGGCTCAGCGGCTCATGGTCC +
Preference number: 5 (lower is better)
Translates to: VGACSAAQGCAPRVR*LGGLGFARLSGSWS
Trigger: GGACCATGAGCCGCTGAGCCGGGCAAACCCCAGGCCACCGAGCCAGCGGACCCTCGGAGCGCAGCCCTGCGCCGCGGAGCAGGCTCCAAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 90 bp ACATCGCCGGGGAACTTGATGATGGGCGACGGCGCGGCGGCGGCGTaGCTCAGCAGGCAGCCCAGGAGACAGAGCGCCCTCAGGGGACCC +
Preference number: 5 (lower is better)
Translates to: TSPGNLMMGDGAAAA*LSRQPRRQSALRGP
Trigger: GGGTCCCCTGAGGGCGCTCTGTCTCCTGGGCTGCCTGCTGAGCCACGCCGCCGCCGCGCCGTCGCCCATCATCAAGTTCCCCGGCGATGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CAA 90 bp GCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCAGGGCCCCAGGGTCTaGGGAGTGCTCCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: ARLPGPSGSFSSSPGPVYQGPRV*GVLQPH
Trigger: ATGGGGCTGGAGCACTCCCAAGACCCTGGGGCCCTG...ATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp GCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATTTGGCCACATCTGGGTaGCCGCAGCGTGGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: ARLPGPSGSFSSSPGPVYLATSG*PQRGFR
Trigger: GCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAA...ATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp GGGGGAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGCTGGTCAGTGGCTaGGGGTACCCTCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GGRGAWEEYSQHLFLGTGRLVSG*GYPRSR
Trigger: CCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCT...CCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp GCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTTCGGTGGCCTGGGGTTaGCCCGGCTCAGCGGCTCAT +
Preference number: 5 (lower is better)
Translates to: APGRSTVSIYSWAPGGATSVAWG*PGSAAH
Trigger: ATGAGCCGCTGAGCCGGGCAAACCCCAGGCCACCGA...AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CAA 90 bp CCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGGGCTGTCCTTCAGCGTaGCCGCCCATGGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: PGPSGSFSSSPGPVYRRQGCPSA*PPMVNR
Trigger: CCTGTTCACCATGGGCGGCAACGCTGAAGGACAGCC...CTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp GCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTAGGCTGGTCAGTGGCTaGGGGTACCCTCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AVELKARLPGPSGSFSSSRLVSG*GYPRSR
Trigger: CCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCT...AGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCAGGCTGGTCAGTGGCTaGGGGTACCCTCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSRLVSG*GYPRSR
Trigger: CCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCT...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGTTGGCCACATCTGGGTaGCCGCAGCGTGGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: PPGPSLVLQARCIEGSGELATSG*PQRGFR
Trigger: GCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAA...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCGGCTGTCCTTCAGCGTaGCCGCCCATGGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSGCPSA*PPMVNR
Trigger: CCTGTTCACCATGGGCGGCAACGCTGAAGGACAGCC...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCGTTGAAACAGGGCCCCAGGGTCTaGGGAGTGCTCCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: KSLKCGSTRAAQSRAALKQGPRV*GVLQPH
Trigger: ATGGGGCTGGAGCACTCCCAAGACCCTGGGGCCCTG...TTTCAACGCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCAGGGCCCCAGGGTCTaGGGAGTGCTCCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGQGPRV*GVLQPH
Trigger: ATGGGGCTGGAGCACTCCCAAGACCCTGGGGCCCTG...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAAGGGGCCCCATGGGCTaGTCACGTGGCGTCACAGTC +
Preference number: 5 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGRGPMG*SRGVTV
Trigger: GACTGTGACGCCACGTGACAAGCCCATGGGGCCCCT...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp CCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGCATTCTTCATCCTGGTaGGGTCGAGGGTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PGPSGSFSSSPGPVYRRQHSSSW*GRGWGW
Trigger: CCAGCCCCACCCTCGACCCAACCAGGATGAAGAATG...CTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CCA 90 bp CCACTCGCTGGACATCAGGGGGCAGTCCCAGGCTGGTCAGTGGCTTaGGGTACCCTCGCTCCAGGGTGCTGGCTGAGTAGATCCAGTATT +
Preference number: 5 (lower is better)
Translates to: PLAGHQGAVPGWSVA*GTLAPGCWLSRSSI
Trigger: AATACTGGATCTACTCAGCCAGCACCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCTGGGACTGCCCCCTGATGTCCAGCGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS-3UTR CAA 90 bp GGGAGGGCTGAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGGCTGTCCTTCAGCGTaGCCGCCCATGGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: GRAEREATAWFSSIQWRRGCPSA*PPMVNR
Trigger: CCTGTTCACCATGGGCGGCAACGCTGAAGGACAGCC...TCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTCAGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGAGGGGCCCCATGGGCTaGTCACGTGGCGTCACAGTC +
Preference number: 5 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVRGPMG*SRGVTV
Trigger: GACTGTGACGCCACGTGACAAGCCCATGGGGCCCCT...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTAGGGGCCCCATGGGCTaGTCACGTGGCGTCACAGTC +
Preference number: 5 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPRGPMG*SRGVTV
Trigger: GACTGTGACGCCACGTGACAAGCCCATGGGGCCCCT...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCGCGGGAAGCCACGGCTaGGTTTTCCTCCATCCAGTG +
Preference number: 5 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSAGSHG*VFLHPV
Trigger: CACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCCACATCGCTCCAGACTaGGAAGGCACGAGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSHIAPD*EGTSKG
Trigger: GCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGTG...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCCTTCACACGGACCACTaGGCCTTCTCCCAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSLHTDH*AFSQGP
Trigger: TGGACCTTGGGAGAAGGCCAAGTGGTCCGTGTGAAG...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCGGCTGTCCTTCAGCGTaGCCGCCCATGGTGAACAGG +
Preference number: 5 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRAGCPSA*PPMVNR
Trigger: CCTGTTCACCATGGGCGGCAACGCTGAAGGACAGCC...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTGAACAGGCTGTACCCTaGGTCAGGGCAGAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: LAVELKARLPGPSGSFSSEQAVP*VRAEAP
Trigger: TGGGGCTTCTGCCCTGACCAAGGGTACAGCCTGTTC...ACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGAATGCTGATTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCGAACAGGCTGTACCCTaGGTCAGGGCAGAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: RMLISCRAEGTAARPLRVEQAVP*VRAEAP
Trigger: TGGGGCTTCTGCCCTGACCAAGGGTACAGCCTGTTC...GACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAATCAGCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp TCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGGAACAGGCTGTACCCTaGGTCAGGGCAGAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: SSSPGPVYRRQWRGRACGEQAVP*VRAEAP
Trigger: TGGGGCTTCTGCCCTGACCAAGGGTACAGCCTGTTC...CCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGAGGGGCCCCATGGGCTaGTCACGTGGCGTCACAGTC +
Preference number: 5 (lower is better)
Translates to: WEEYSQHLFLGTGRSHSLRGPMG*SRGVTV
Trigger: GACTGTGACGCCACGTGACAAGCCCATGGGGCCCCT...CAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCAGTCAGCATCTATTCTaGGGCACCGGGAGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSSQHLF*GTGRSH
Trigger: GTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACT...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCAGTCAGCATCTATTCTaGGGCACCGGGAGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSSQHLF*GTGRSH
Trigger: GTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACT...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAAACTCTTTGTCCGTTTaGGGGGCGACATCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PGPSLVLQARCIEGSGEENSLSV*GATSPG
Trigger: CCCCGGCGATGTCGCCCCCAAAACGGACAAAGAGTT...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CAA 90 bp GCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATTATGTGATCTGGTTCTaGTCCCACTTGGGCTTGCGA +
Preference number: 5 (lower is better)
Translates to: ARLPGPSGSFSSSPGPVYYVIWF*SHLGLR
Trigger: TCGCAAGCCCAAGTGGGACAAGAACCAGATCACATA...ATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGACACATCGCTCCAGACTaGGAAGGCACGAGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRHIAPD*EGTSKG
Trigger: GCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGTG...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AAAGGAGAAGAGCCTGAAGTGTGGCAGCACCAGGGCAGCCCAAAGCAGGGCTGCGCCACCAGTGCCCTCTaGAGACAGTCTCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: KGEEPEVWQHQGSPKQGCATSAL*RQSPLA
Trigger: AGCCAATGGAGACTGTCTCAAGAGGGCACTGGTGGC...GCAGCCCTGCTTTGGGCTGCCCTGGTGCTGCCACACTTCAGGCTCTTCTCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAACTGGGGTGGGACTTGTaGGCCCCTGGGTCATACGAT +
Preference number: 5 (lower is better)
Translates to: PGPSLVLQARCIEGSGEELGWDL*APGSYD
Trigger: ATCGTATGACCCAGGGGCCAACAAGTCCCACCCCAG...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CCA 90 bp GGGGACAGAAGCCGTACTTGCCATCCTTCTCAAAGTTGTAGGTGGTaGAGCACCAGAGGAAGCCATCGCTGCGGCCGGTATCAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: GDRSRTCHPSQSCRW*STRGSHRCGRYQCS
Trigger: GCTGCACTGATACCGGCCGCAGCGATGGCTTCCTCTGGTGCTCCACCACCTACAACTTTGAGAAGGATGGCAAGTACGGCTTCTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS CCA 90 bp GCCCTCAGTGGTGCAGCTGTCATAGGATGTGCCCTGGAAGCGGAATaGAAACTTGCAGGGCTGTCCTTCAGCGTTGCCGCCCATGGTGAA +
Preference number: 5 (lower is better)
Translates to: ALSGAAVIGCALEAE*KLAGLSFSVAAHGE
Trigger: TTCACCATGGGCGGCAACGCTGAAGGACAGCCCTGCAAGTTTCCATTCCGCTTCCAGGGCACATCCTATGACAGCTGCACCACTGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS CCA 90 bp AGGCCAGAATGTGGCCACCAGCAGGGGCCCCATGGGCTTGTCACGTaGCGTCACAGTCCGCCAAATGAACCGGTCCTTGAAGAAGAAGAT +
Preference number: 5 (lower is better)
Translates to: RPECGHQQGPHGLVT*RHSPPNEPVLEEED
Trigger: ATCTTCTTCTTCAAGGACCGGTTCATTTGGCGGACTGTGACGCCACGTGACAAGCCCATGGGGCCCCTGCTGGTGGCCACATTCTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS-3UTR CAA 90 bp TCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGTGGTTCTTGTCCCACTaGGGCTTGCGAGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: SSSPGPVYRRQWRGRACGWFLSH*GLRGKK
Trigger: CTTCTTCCCTCGCAAGCCCAAGTGGGACAAGAACCA...CCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCCACATCGCTCCAGACTaGGAAGGCACGAGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRAHIAPD*EGTSKG
Trigger: GCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGTG...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGCTTCACACGGACCACTaGGCCTTCTCCCAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVLHTDH*AFSQGP
Trigger: TGGACCTTGGGAGAAGGCCAAGTGGTCCGTGTGAAG...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp GGGGGAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGCAGCTGTTGTACTCCTaGCCATTGAACAAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: GGRGAWEEYSQHLFLGTGQLLYS*PLNKKG
Trigger: CCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTG...CCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp CCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGCAGCTCTCATATTTGTaGCCCAGGAAAGTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: PGPSGSFSSSPGPVYRRQQLSYL*PRKVKG
Trigger: CCCCTTCACTTTCCTGGGCAACAAATATGAGAGCTG...CTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGAATGCTGATTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCGCATCTGCGATGAGCTaGGGGAAGCCAGGATCCATT +
Preference number: 5 (lower is better)
Translates to: RMLISCRAEGTAARPLRVASAMS*GKPGSI
Trigger: AATGGATCCTGGCTTCCCCAAGCTCATCGCAGATGC...GACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAATCAGCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGCATCTGCGATGAGCTaGGGGAAGCCAGGATCCATT +
Preference number: 5 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEASAMS*GKPGSI
Trigger: AATGGATCCTGGCTTCCCCAAGCTCATCGCAGATGC...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp GCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGAGTCAGCATCTATTCTaGGGCACCGGGAGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: AGSHGLVFLHPVEKRLGRSQHLF*GTGRSH
Trigger: GTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACT...CCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCACCAGTGCCCTCTaGAGACAGTCTCCATTGGCT +
Preference number: 5 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRATSAL*RQSPLA
Trigger: AGCCAATGGAGACTGTCTCAAGAGGGCACTGGTGGC...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS GCA 90 bp GCAGTCCCAGGCTGGTCAGTGGCTTGGGGTACCCTCGCTCCAGGGTaGTGGCTGAGTAGATCCAGTATTCATTCCCTGCAAAGAACACAG +
Preference number: 5 (lower is better)
Translates to: AVPGWSVAWGTLAPG*WLSRSSIHSLQRTQ
Trigger: CTGTGTTCTTTGCAGGGAATGAATACTGGATCTACTCAGCCAGCACCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCTGGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CCA 90 bp GTCCCACTTGGGCTTGCGAGGGAAGAAGTTGTAGTTGGCCACATCTaGGTTGCCGCAGCGTGGCTTCCGCATGGTCTCGATGGTATTCTG +
Preference number: 5 (lower is better)
Translates to: VPLGLAREEVVVGHI*VAAAWLPHGLDGIL
Trigger: CAGAATACCATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCTCGCAAGCCCAAGTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 90 bp CATGGGGACAGAAGCCGTACTTGCCATCCTTCTCAAAGTTGTAGGTaGTGGAGCACCAGAGGAAGCCATCGCTGCGGCCGGTATCAGTGC +
Preference number: 5 (lower is better)
Translates to: HGDRSRTCHPSQSCR*WSTRGSHRCGRYQC
Trigger: GCACTGATACCGGCCGCAGCGATGGCTTCCTCTGGTGCTCCACCACCTACAACTTTGAGAAGGATGGCAAGTACGGCTTCTGTCCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS CCA 90 bp GTCCCAGGCTGGTCAGTGGCTTGGGGTACCCTCGCTCCAGGGTGCTaGCTGAGTAGATCCAGTATTCATTCCCTGCAAAGAACACAGCCT +
Preference number: 5 (lower is better)
Translates to: VPGWSVAWGTLAPGC*LSRSSIHSLQRTQP
Trigger: AGGCTGTGTTCTTTGCAGGGAATGAATACTGGATCTACTCAGCCAGCACCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CCA 90 bp CACACAGTGAGCCAGCAGCTATCTTCCCTCCTCGCTCTTGGCACGTaGGGGGCAGAAAGAAGGAGCATTTGTCATCAGGAGGCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: HTVSQQLSSLLALGT*GAERRSICHQEAWV
Trigger: AACCCAGGCCTCCTGATGACAAATGCTCCTTCTTTCTGCCCCCCACGTGCCAAGAGCGAGGAGGGAAGATAGCTGCTGGCTCACTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CAA 90 bp ATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCTTGGCCACATCTGGGTaGCCGCAGCGTGGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: MWAEMHCAVTSDNLSPSVLATSG*PQRGFR
Trigger: GCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAA...GACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp TTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGAGGTTGGCCACATCTGGGTaGCCGCAGCGTGGCTTCCGC +
Preference number: 5 (lower is better)
Translates to: FILVDISHGEWLKGGAGRLATSG*PQRGFR
Trigger: GCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAA...CCTCCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTTGGTTCTTGTCCCACTaGGGCTTGCGAGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPWFLSH*GLRGKK
Trigger: CTTCTTCCCTCGCAAGCCCAAGTGGGACAAGAACCA...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp GCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGTGGTTCTTGTCCCACTaGGGCTTGCGAGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: AGSHGLVFLHPVEKRLGRWFLSH*GLRGKK
Trigger: CTTCTTCCCTCGCAAGCCCAAGTGGGACAAGAACCA...CCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGATCCCAGCGGCCAAAGTaGATCATGATGTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRSQRPK*IMMSAS
Trigger: AGAGGCAGACATCATGATCAACTTTGGCCGCTGGGA...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGTCCCAGCGGCCAAAGTaGATCATGATGTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: KGRLGGVQSASILGHREESQRPK*IMMSAS
Trigger: AGAGGCAGACATCATGATCAACTTTGGCCGCTGGGA...CTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCAGCTGTTGTACTCCTaGCCATTGAACAAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSQLLYS*PLNKKG
Trigger: CCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTG...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCAGCTCTCATATTTGTaGCCCAGGAAAGTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSQLSYL*PRKVKG
Trigger: CCCCTTCACTTTCCTGGGCAACAAATATGAGAGCTG...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp ATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGTAGGACAGGGCCCCAGGGTCTaGGGAGTGCTCCAGCCCCAT +
Preference number: 5 (lower is better)
Translates to: ILGHREEPLSGILNYQVGQGPRV*GVLQPH
Trigger: ATGGGGCTGGAGCACTCCCAAGACCCTGGGGCCCTG...TCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCCACGCTCTTCAGACTTaGGTTCTCCAGCTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSHALQT*VLQLQV
Trigger: TACCTGAAGCTGGAGAACCAAAGTCTGAAGAGCGTG...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCCTAGCCAGTCGGATTaGATGCTTCCAAACTTCACG +
Preference number: 5 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSPSQSD*MLPNFT
Trigger: CGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAGG...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCCCTAGCCAGTCGGATTaGATGCTTCCAAACTTCACG +
Preference number: 5 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSPSQSD*MLPNFT
Trigger: CGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAGG...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000566564.1
ENST00000570308.5
CDS-3UTR CAA 90 bp GAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGATCTCCTAGCTGCACTTaGCGAGCAAGAGCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: EGAPGRSTVSIYSWAPGGSPSCT*RARALQ
Trigger: TTGCAGAGCTCTTGCTCGCAAAGTGCAGCTAGGAGA...TCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCAGAAAGAAGGAGCATTaGTCATCAGGAGGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSRKKEH*SSGGLG
Trigger: ACCCAGGCCTCCTGATGACAAATGCTCCTTCTTTCT...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS TCA 90 bp CAGGCTGGTCAGTGGCTTGGGGTACCCTCGCTCCAGGGTGCTGGCTaGGTAGATCCAGTATTCATTCCCTGCAAAGAACACAGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: QAGQWLGVPSLQGAG*VDPVFIPCKEHSLL
Trigger: GAGAAGGCTGTGTTCTTTGCAGGGAATGAATACTGGATCTACTCAGCCAGCACCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS TCA 90 bp GCCTGTGGGAGCCAGGGCCAGCTCAGCAGCCTAGCCAGTCGGATTTaGTGCTTCCAAACTTCACGCTCTTCAGACTTTGGTTCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: ACGSQGQLSSLASRI*CFQTSRSSDFGSPA
Trigger: AGCTGGAGAACCAAAGTCTGAAGAGCGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAGGCTGCTGAGCTGGCCCTGGCTCCCACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000566564.1
ENST00000570308.5
CDS GCA 90 bp CATCATCGTAGTTGGCTGTGGTCGCACACCACATCTTTCCGTCACTaGGGCCGGCGCTGGTGCAGCTCTCATATTTGTTGCCCAGGAAAG +
Preference number: 5 (lower is better)
Translates to: HHRSWLWSHTTSFRH*GRRWCSSHICCPGK
Trigger: CTTTCCTGGGCAACAAATATGAGAGCTGCACCAGCGCCGGCCGCAGTGACGGAAAGATGTGGTGTGCGACCACAGCCAACTACGATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp GAGAAGAGACTCGGTAGGGACATGCTAAGTAGAGTGAACAGGGGAACCATCACTACATCGCCGGGGAACTaGATGATGGGCGACGGCGCG +
Preference number: 5 (lower is better)
Translates to: EKRLGRDMLSRVNRGTITTSPGN*MMGDGA
Trigger: CGCGCCGTCGCCCATCATCAAGTTCCCCGGCGATGT...AGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTCCCTACCGAGTCTCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CAA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGATATGTGATCTGGTTCTaGTCCCACTTGGGCTTGCGA +
Preference number: 5 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGYVIWF*SHLGLR
Trigger: TCGCAAGCCCAAGTGGGACAAGAACCAGATCACATA...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGACAGCTGTTGTACTCCTaGCCATTGAACAAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRQLLYS*PLNKKG
Trigger: CCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTG...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCGTATCAGTGCAGCTGTaGTACTCCTTGCCATTGAAC +
Preference number: 5 (lower is better)
Translates to: RGAWEEYSQHLFLGTGRSVSVQL*YSLPLN
Trigger: GTTCAATGGCAAGGAGTACAACAGCTGCACTGATAC...GCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp GAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGACAGCTCTCATATTTGTaGCCCAGGAAAGTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: EGAPGRSTVSIYSWAPGGQLSYL*PRKVKG
Trigger: CCCCTTCACTTTCCTGGGCAACAAATATGAGAGCTG...TCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp CCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGACAGCTCTCATATTTGTaGCCCAGGAAAGTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: PSGSFSSSPGPVYRRQWRQLSYL*PRKVKG
Trigger: CCCCTTCACTTTCCTGGGCAACAAATATGAGAGCTG...TCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCGTGCAGCTCTCATATTaGTTGCCCAGGAAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSVQLSY*LPRKVK
Trigger: CTTCACTTTCCTGGGCAACAAATATGAGAGCTGCAC...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGCATCTGCGATGAGCTaGGGGAAGCCAGGATCCATT +
Preference number: 5 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACASAMS*GKPGSI
Trigger: AATGGATCCTGGCTTCCCCAAGCTCATCGCAGATGC...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp GAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGACCTAGCCAGTCGGATTaGATGCTTCCAAACTTCACG +
Preference number: 5 (lower is better)
Translates to: EGAPGRSTVSIYSWAPGGPSQSD*MLPNFT
Trigger: CGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAGG...TCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp CGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAATACGATGCTCTTGTTaGTCTGTCTGTCGATTACTG +
Preference number: 5 (lower is better)
Translates to: RLPGPSGSFSSSPGPVYRIRCSC*SVCRLL
Trigger: CAGTAATCGACAGACAGACAAACAAGAGCATCGTAT...TCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS TCA 90 bp CATCGCTGCGGCCGGTATCAGTGCAGCTGTTGTACTCCTTGCCATTaGACAAGAAGGGGAACTTGCAGTACTCCCCATCGGCGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: HRCGRYQCSCCTPCH*TRRGTCSTPHRRSH
Trigger: ATGGGAACGCCGATGGGGAGTACTGCAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTGCACTGATACCGGCCGCAGCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS GCA 90 bp ACTTGGGCTTGCGAGGGAAGAAGTTGTAGTTGGCCACATCTGGGTTaGCGCAGCGTGGCTTCCGCATGGTCTCGATGGTATTCTGGTCAA +
Preference number: 5 (lower is better)
Translates to: TWACEGRSCSWPHLG*RSVASAWSRWYSGQ
Trigger: TTGACCAGAATACCATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCTCGCAAGCCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 90 bp TCTGGGTTGCCGCAGCGTGGCTTCCGCATGGTCTCGATGGTATTCTaGTCAAGATCACCTGTCTGGGGCAGTCCAAAGAACTTCTGCATC +
Preference number: 5 (lower is better)
Translates to: SGLPQRGFRMVSMVF*SRSPVWGSPKNFCI
Trigger: GATGCAGAAGTTCTTTGGACTGCCCCAGACAGGTGATCTTGACCAGAATACCATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 90 bp GCGAGGGAAGAAGTTGTAGTTGGCCACATCTGGGTTGCCGCAGCGTaGCTTCCGCATGGTCTCGATGGTATTCTGGTCAAGATCACCTGT +
Preference number: 5 (lower is better)
Translates to: AREEVVVGHIWVAAA*LPHGLDGILVKITC
Trigger: ACAGGTGATCTTGACCAGAATACCATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 90 bp TGTCTGTCGATTACTGTAGCTATCTGGCTTGCCCATTCTTCATCCTaGTTGGGTCGAGGGTGGGGCTGGGCAGTGACCAGTCATCGGGTT +
Preference number: 5 (lower is better)
Translates to: CLSITVAIWLAHSSS*LGRGWGWAVTSHRV
Trigger: AACCCGATGACTGGTCACTGCCCAGCCCCACCCTCGACCCAACCAGGATGAAGAATGGGCAAGCCAGATAGCTACAGTAATCGACAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CAA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGTGCAGCTCTCATATTaGTTGCCCAGGAAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: PPGPSLVLQARCIEGSGEVQLSY*LPRKVK
Trigger: CTTCACTTTCCTGGGCAACAAATATGAGAGCTGCAC...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp CTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGTGCAGCTCTCATATTaGTTGCCCAGGAAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: LVLQARCIEGSGEEGPVGVQLSY*LPRKVK
Trigger: CTTCACTTTCCTGGGCAACAAATATGAGAGCTGCAC...TCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCACGCTCTTCAGACTTaGGTTCTCCAGCTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGHALQT*VLQLQV
Trigger: TACCTGAAGCTGGAGAACCAAAGTCTGAAGAGCGTG...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGACCTAGCCAGTCGGATTaGATGCTTCCAAACTTCACG +
Preference number: 5 (lower is better)
Translates to: SGSFSSSPGPVYRRQWRGPSQSD*MLPNFT
Trigger: CGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAGG...TCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000566564.1
ENST00000570308.5
CDS-3UTR CAA 90 bp AACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACGCGGGAAGCCACGGCTaGGTTTTCCTCCATCCAGTG +
Preference number: 5 (lower is better)
Translates to: NRGTITMWAEMHCAVTSDAGSHG*VFLHPV
Trigger: CACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC...GTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS GCA 90 bp AGGAGCATTTGTCATCAGGAGGCCTGGGTTCTCCTAGCTGCACTTTaGGAGCAAGAGCTCTGCAAAAGTGAGATGGTGTCACTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: RSICHQEAWVLLAAL*EQELCKSEMVSLGW
Trigger: CCACCCCAGTGACACCATCTCACTTTTGCAGAGCTCTTGCTCGCAAAGTGCAGCTAGGAGAACCCAGGCCTCCTGATGACAAATGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CCA 90 bp TCATGGATTCGAGAAAACCGCAGTGGGGTCACATCGCTCCAGACTTaGAAGGCACGAGCAAAGGCATCATCCACTGTCTCTGGGTCCAGA +
Preference number: 5 (lower is better)
Translates to: SWIRENRSGVTSLQT*KARAKASSTVSGSR
Trigger: TCTGGACCCAGAGACAGTGGATGATGCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGTGACCCCACTGCGGTTTTCTCGAATCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 90 bp TGCTCCCAGCGGCCAAAGTTGATCATGATGTCTGCCTCTCCATCATaGATTCGAGAAAACCGCAGTGGGGTCACATCGCTCCAGACTTGG +
Preference number: 5 (lower is better)
Translates to: CSQRPKLIMMSASPS*IRENRSGVTSLQTW
Trigger: CCAAGTCTGGAGCGATGTGACCCCACTGCGGTTTTCTCGAATCCATGATGGAGAGGCAGACATCATGATCAACTTTGGCCGCTGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTTATGTGATCTGGTTCTaGTCCCACTTGGGCTTGCGA +
Preference number: 5 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACYVIWF*SHLGLR
Trigger: TCGCAAGCCCAAGTGGGACAAGAACCAGATCACATA...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp CATCCAGTGGAGAAGAGACTCGGTAGGGACATGCTAAGTAGAGTGAACAGGGGACACATCGCTCCAGACTaGGAAGGCACGAGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: HPVEKRLGRDMLSRVNRGHIAPD*EGTSKG
Trigger: GCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGTG...TCCCCTGTTCACTCTACTTAGCATGTCCCTACCGAGTCTCTTCTCCACTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp GAAGGGGCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGATTGTACTCCTTGCCATaGAACAAGAAGGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: EGAPGRSTVSIYSWAPGGLYSLP*NKKGNL
Trigger: CAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAA...TCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp GCGCCTGGGAGGAGTACAGTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTTTGTACTCCTTGCCATaGAACAAGAAGGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: APGRSTVSIYSWAPGGATLYSLP*NKKGNL
Trigger: CAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAA...AGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGACTGTACTCCTCCCAGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGTATCAGTGCAGCTGTaGTACTCCTTGCCATTGAAC +
Preference number: 5 (lower is better)
Translates to: PGPSLVLQARCIEGSGEEVSVQL*YSLPLN
Trigger: GTTCAATGGCAAGGAGTACAACAGCTGCACTGATAC...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGGGAGCAATACAATGTCCTGTTaGCAGATCTCAGGAGTGACA +
Preference number: 5 (lower is better)
Translates to: SSPGPVYRRQWRGRACGSNTMSC*QISGVT
Trigger: TGTCACTCCTGAGATCTGCAAACAGGACATTGTATT...GCTCCCACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp GCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTAATACAATGTCCTGTTaGCAGATCTCAGGAGTGACA +
Preference number: 5 (lower is better)
Translates to: AVELKARLPGPSGSFSSSNTMSC*QISGVT
Trigger: TGTCACTCCTGAGATCTGCAAACAGGACATTGTATT...AGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGAATGCTGATTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCAAATGAACCGGTCCTaGAAGAAGAAGATCTCACCA +
Preference number: 5 (lower is better)
Translates to: RMLISCRAEGTAARPLRVQMNRS*KKKISP
Trigger: TGGTGAGATCTTCTTCTTCAAGGACCGGTTCATTTG...GACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAATCAGCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS GCA 90 bp GTATCCATCGCCATGCTCCCAGCGGCCAAAGTTGATCATGATGTCTaGCTCTCCATCATGGATTCGAGAAAACCGCAGTGGGGTCACATC +
Preference number: 5 (lower is better)
Translates to: VSIAMLPAAKVDHDV*LSIMDSRKPQWGHI
Trigger: GATGTGACCCCACTGCGGTTTTCTCGAATCCATGATGGAGAGGCAGACATCATGATCAACTTTGGCCGCTGGGAGCATGGCGATGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS GCA 90 bp GATGCTCTTGTTTGTCTGTCTGTCGATTACTGTAGCTATCTGGCTTaGCCATTCTTCATCCTGGTTGGGTCGAGGGTGGGGCTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: DALVCLSVDYCSYLA*PFFILVGSRVGLGS
Trigger: ACTGCCCAGCCCCACCCTCGACCCAACCAGGATGAAGAATGGGCAAGCCAGATAGCTACAGTAATCGACAGACAGACAAACAAGAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CCA 90 bp GATCATGATGTCTGCCTCTCCATCATGGATTCGAGAAAACCGCAGTaGGGTCACATCGCTCCAGACTTGGAAGGCACGAGCAAAGGCATC +
Preference number: 5 (lower is better)
Translates to: DHDVCLSIMDSRKPQ*GHIAPDLEGTSKGI
Trigger: GATGCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGTGACCCCACTGCGGTTTTCTCGAATCCATGATGGAGAGGCAGACATCATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 90 bp CTGCACTTTGCGAGCAAGAGCTCTGCAAAAGTGAGATGGTGTCACTaGGGTGGGACTTGTTGGCCCCTGGGTCATACGATGCTCTTGTTT +
Preference number: 5 (lower is better)
Translates to: LHFASKSSAKVRWCH*GGTCWPLGHTMLLF
Trigger: AAACAAGAGCATCGTATGACCCAGGGGCCAACAAGTCCCACCCCAGTGACACCATCTCACTTTTGCAGAGCTCTTGCTCGCAAAGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CAA 90 bp AACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACTGGTTCTTGTCCCACTaGGGCTTGCGAGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: NRGTITMWAEMHCAVTSDWFLSH*GLRGKK
Trigger: CTTCTTCCCTCGCAAGCCCAAGTGGGACAAGAACCA...GTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp ATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGTAGGACTTCACACGGACCACTaGGCCTTCTCCCAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: ILGHREEPLSGILNYQVGLHTDH*AFSQGP
Trigger: TGGACCTTGGGAGAAGGCCAAGTGGTCCGTGTGAAG...TCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGTTGTACTCCTTGCCATaGAACAAGAAGGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRLYSLP*NKKGNL
Trigger: CAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAA...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGGAACAGGCTGTACCCTaGGTCAGGGCAGAAGCCCCA +
Preference number: 5 (lower is better)
Translates to: LFILVDISHGEWLKGGAGEQAVP*VRAEAP
Trigger: TGGGGCTTCTGCCCTGACCAAGGGTACAGCCTGTTC...CCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp GTGTCTTTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGAGGCTGGTCAGTGGCTaGGGGTACCCTCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VSLFILVDISHGEWLKGGRLVSG*GYPRSR
Trigger: CCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCT...CCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp TTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTATGTCTTCTTGTTTTaGCTCCAGTTAAAGGCGGCA +
Preference number: 5 (lower is better)
Translates to: LAVELKARLPGPSGSFSSYVFLF*LQLKAA
Trigger: TGCCGCCTTTAACTGGAGCAAAAACAAGAAGACATA...ACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGAATGCTGATTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCTATGTCTTCTTGTTTTaGCTCCAGTTAAAGGCGGCA +
Preference number: 5 (lower is better)
Translates to: RMLISCRAEGTAARPLRVYVFLF*LQLKAA
Trigger: TGCCGCCTTTAACTGGAGCAAAAACAAGAAGACATA...GACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAATCAGCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp CCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTTGTATCTCCAGAATTaGTCTCCAGCAAAGATGTAT +
Preference number: 5 (lower is better)
Translates to: PGPSGSFSSSPGPVYRRQLYLQN*SPAKMY
Trigger: ATACATCTTTGCTGGAGACAAATTCTGGAGATACAA...CTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGGGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp AGAATGCTGATTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCAACACAGACTTCCATTaGTCAGAGGTGTTCAAACCA +
Preference number: 5 (lower is better)
Translates to: RMLISCRAEGTAARPLRVNTDFH*SEVFKP
Trigger: TGGTTTGAACACCTCTGACAAATGGAAGTCTGTGTT...GACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAATCAGCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437642.6
CDS CCA 90 bp CATACGATGCTCTTGTTTGTCTGTCTGTCGATTACTGTAGCTATCTaGCTTGCCCATTCTTCATCCTGGTTGGGTCGAGGGTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HTMLLFVCLSITVAI*LAHSSSWLGRGWGW
Trigger: CCAGCCCCACCCTCGACCCAACCAGGATGAAGAATGGGCAAGCCAGATAGCTACAGTAATCGACAGACAGACAAACAAGAGCATCGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CAA 90 bp ACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTTGCACTGCCAACTCTTaGTCCGTTTTGGGGGCGACA +
Preference number: 5 (lower is better)
Translates to: TITMWAEMHCAVTSDNLSCTANS*SVLGAT
Trigger: TGTCGCCCCCAAAACGGACAAAGAGTTGGCAGTGCA...ACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CAA 90 bp CCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTAATACAATGTCCTGTTaGCAGATCTCAGGAGTGACA +
Preference number: 5 (lower is better)
Translates to: PSLVLQARCIEGSGEEGPNTMSC*QISGVT
Trigger: TGTCACTCCTGAGATCTGCAAACAGGACATTGTATT...AGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTCAAATGAACCGGTCCTaGAAGAAGAAGATCTCACCA +
Preference number: 5 (lower is better)
Translates to: FSSSPGPVYRRQWRGRACQMNRS*KKKISP
Trigger: TGGTGAGATCTTCTTCTTCAAGGACCGGTTCATTTG...ACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTATGTCTTCTTGTTTTaGCTCCAGTTAAAGGCGGCA +
Preference number: 5 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRAYVFLF*LQLKAA
Trigger: TGCCGCCTTTAACTGGAGCAAAAACAAGAAGACATA...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp GGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGCAAAGCAGGGCTGCGTaGAAAATATCAAAGTATCTC +
Preference number: 5 (lower is better)
Translates to: GSFSSSPGPVYRRQWRGRQSRAA*KISKYL
Trigger: GAGATACTTTGATATTTTCAACGCAGCCCTGCTTTG...CCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp ATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAATGCGGGAAGCCACGGCTaGGTTTTCCTCCATCCAGTG +
Preference number: 5 (lower is better)
Translates to: MHCAVTSDNLSPSVRKCNAGSHG*VFLHPV
Trigger: CACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC...ATTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR CAA 90 bp GCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTTCTCTTTATTCATACTTGTaGACATTTCCCATGGGGAAT +
Preference number: 5 (lower is better)
Translates to: AVELKARLPGPSGSFSSSLYSYL*TFPMGN
Trigger: ATTCCCCATGGGAAATGTCAACAAGTATGAATAAAG...AGAACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR CAA 90 bp TCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCAAACTGAGAAGTCACTaGCCTAACATCATCACTAGG +
Preference number: 5 (lower is better)
Translates to: SFSSSPGPVYRRQWRGRAKLRSH*PNIITR
Trigger: CCTAGTGATGATGTTAGGCAAGTGACTTCTCAGTTT...GGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437642.6
CDS-3UTR CAA 90 bp TTAGCTGTAGAGCTGAAGGCACGGCTGCCAGGCCCCTCCGGGTCCTTCTCTAGTAGGAAATTTCCCAGTTaGCAGATGAAGAAACTGAGA +
Preference number: 5 (lower is better)
Translates to: LAVELKARLPGPSGSFSSRKFPS*QMKKLR
Trigger: TCTCAGTTTCTTCATCTGCAAACTGGGAAATTTCCT...ACTAGAGAAGGACCCGGAGGGGCCTGGCAGCCGTGCCTTCAGCTCTACAGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437642.6
CDS-3UTR CAA 90 bp GATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAATTCAGCACAAACAGGTaGCAGCTCTCCTTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: DALCSDFRQPESFCQEMQFSTNR*QLSLGQ
Trigger: CTGCCCCAAGGAGAGCTGCAACCTGTTTGTGCTGAA...TTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp CCTCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGTTGTATCTCCAGAATTaGTCTCCAGCAAAGATGTAT +
Preference number: 5 (lower is better)
Translates to: PPGPSLVLQARCIEGSGELYLQN*SPAKMY
Trigger: ATACATCTTTGCTGGAGACAAATTCTGGAGATACAA...CTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp AGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGCATCTGCGATGAGCTaGGGGAAGCCAGGATCCATT +
Preference number: 5 (lower is better)
Translates to: SIYSWAPGGATLWNLKLPASAMS*GKPGSI
Trigger: AATGGATCCTGGCTTCCCCAAGCTCATCGCAGATGC...TGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp GGAGGGCTGAGCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGCTTTATTCATACTTGTaGACATTTCCCATGGGGAAT +
Preference number: 5 (lower is better)
Translates to: GGLSGKPRLGFPPSSGEELYSYL*TFPMGN
Trigger: ATTCCCCATGGGAAATGTCAACAAGTATGAATAAAG...CTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGCTCAGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS CCA 90 bp GGCTTCCGCATGGTCTCGATGGTATTCTGGTCAAGATCACCTGTCTaGGGCAGTCCAAAGAACTTCTGCATCTTCTTTAGTGTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GFRMVSMVFWSRSPV*GSPKNFCIFFSVSF
Trigger: GAAGGACACACTAAAGAAGATGCAGAAGTTCTTTGGACTGCCCCAGACAGGTGATCTTGACCAGAATACCATCGAGACCATGCGGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS-3UTR CAA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTATCCCAGCGGCCAAAGTaGATCATGATGTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLSQRPK*IMMSAS
Trigger: AGAGGCAGACATCATGATCAACTTTGGCCGCTGGGA...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp TCTTTATTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCACTTCACACGGACCACTaGGCCTTCTCCCAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: SLFILVDISHGEWLKGGALHTDH*AFSQGP
Trigger: TGGACCTTGGGAGAAGGCCAAGTGGTCCGTGTGAAG...TGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp AACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACGTATCAGTGCAGCTGTaGTACTCCTTGCCATTGAAC +
Preference number: 5 (lower is better)
Translates to: NRGTITMWAEMHCAVTSDVSVQL*YSLPLN
Trigger: GTTCAATGGCAAGGAGTACAACAGCTGCACTGATAC...GTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp AGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGGACATGAATACAATGTCCTGTTaGCAGATCTCAGGAGTGACA +
Preference number: 5 (lower is better)
Translates to: SHGLVFLHPVEKRLGRDMNTMSC*QISGVT
Trigger: TGTCACTCCTGAGATCTGCAAACAGGACATTGTATT...CATGTCCCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp GGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGTTGTATCTCCAGAATTaGTCTCCAGCAAAGATGTAT +
Preference number: 5 (lower is better)
Translates to: GPSLVLQARCIEGSGEEGLYLQN*SPAKMY
Trigger: ATACATCTTTGCTGGAGACAAATTCTGGAGATACAA...CCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAAGGGCCTGTGTTCTTCTTCACCTCATaGTATCTCCAGAATTTGTCT +
Preference number: 5 (lower is better)
Translates to: SLVLQARCIEGSGEEGPVFFFTS*YLQNLS
Trigger: AGACAAATTCTGGAGATACAATGAGGTGAAGAAGAA...CACAGGCCCTTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp TCCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGATTCTTCTTCACCTCATaGTATCTCCAGAATTTGTCT +
Preference number: 5 (lower is better)
Translates to: SGSFSSSPGPVYRRQWRGFFFTS*YLQNLS
Trigger: AGACAAATTCTGGAGATACAATGAGGTGAAGAAGAA...TCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS-3UTR CAA 90 bp GCGGGAAGCCACGGCTTGGTTTTCCTCCATCCAGTGGAGAAGAGACTCGGTAGGTTCTTCTTCACCTCATaGTATCTCCAGAATTTGTCT +
Preference number: 5 (lower is better)
Translates to: AGSHGLVFLHPVEKRLGRFFFTS*YLQNLS
Trigger: AGACAAATTCTGGAGATACAATGAGGTGAAGAAGAA...CCTACCGAGTCTCTTCTCCACTGGATGGAGGAAAACCAAGCCGTGGCTTCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp GAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCCACGCTCTTCAGACTTaGGTTCTCCAGCTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: EMHCAVTSDNLSPSVRKCHALQT*VLQLQV
Trigger: TACCTGAAGCTGGAGAACCAAAGTCTGAAGAGCGTG...GCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp AGGGACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCCTAGCCAGTCGGATTaGATGCTTCCAAACTTCACG +
Preference number: 5 (lower is better)
Translates to: RDMLSRVNRGTITMWAEMPSQSD*MLPNFT
Trigger: CGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAGG...CATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR CAA 90 bp CCGGGTCCTTCTCTAGTTCTCCAGGCCCGGTGTATCGAAGGCAGTGGAGAGGAACTTTATTCATACTTGTaGACATTTCCCATGGGGAAT +
Preference number: 5 (lower is better)
Translates to: PGPSLVLQARCIEGSGEELYSYL*TFPMGN
Trigger: ATTCCCCATGGGAAATGTCAACAAGTATGAATAAAG...TTCCTCTCCACTGCCTTCGATACACCGGGCCTGGAGAACTAGAGAAGGACCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000566564.1
ENST00000570308.5
CDS-3UTR CAA 90 bp AGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGCCCCTTAAAGTGATTTaGAACACCAAGGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: SRVNRGTITMWAEMHCAVPLKVI*NTKGWV
Trigger: AACCCAGCCCTTGGTGTTCAAAATCACTTTAAGGGG...CACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CAA 90 bp TTCATACTTGTTGACATTTCCCATGGGGAATGGTTGAAGGGAGGGGCAGGGAGGAGTCCATGGGGCCTCTaGACTTTCAGAGTAAGTGAA +
Preference number: 5 (lower is better)
Translates to: FILVDISHGEWLKGGAGRSPWGL*TFRVSE
Trigger: TTCACTTACTCTGAAAGTCAAGAGGCCCCATGGACT...CCTCCCTGCCCCTCCCTTCAACCATTCCCCATGGGAAATGTCAACAAGTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS GCA 90 bp AGAACTTCTGCATCTTCTTTAGTGTGTCCTTCAGCACAAACAGGTTaGAGCTCTCCTTGGGGCAGCCATAGAAGGTGTTCAGGTATTGGC +
Preference number: 5 (lower is better)
Translates to: RTSASSLVCPSAQTG*SSPWGSHRRCSGIG
Trigger: GCCAATACCTGAACACCTTCTATGGCTGCCCCAAGGAGAGCTGCAACCTGTTTGTGCTGAAGGACACACTAAAGAAGATGCAGAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543485.5
CDS GCA 90 bp AGAACTTCTGCATCTTCTTTAGTGTGTCCTTCAGCACAAACAGGTTaGAGCTCTCCTTGGGGCAGCCATAGAAGGTGTTCAGGTATTGCC +
Preference number: 5 (lower is better)
Translates to: RTSASSLVCPSAQTG*SSPWGSHRRCSGIA
Trigger: GGCAATACCTGAACACCTTCTATGGCTGCCCCAAGGAGAGCTGCAACCTGTTTGTGCTGAAGGACACACTAAAGAAGATGCAGAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS-3UTR CAA 90 bp TTGCTGATTCTTCAGGGCTCTTTCTACAGGACAGAGGGACTAGAGCTTACTCTCTATGTGATCTGGTTCTaGTCCCACTTGGGCTTGCGA +
Preference number: 5 (lower is better)
Translates to: LLILQGSFYRTEGLELTLYVIWF*SHLGLR
Trigger: TCGCAAGCCCAAGTGGGACAAGAACCAGATCACATA...GAGAGTAAGCTCTAGTCCCTCTGTCCTGTAGAAAGAGCCCTGAAGAATCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CAA 90 bp AGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCACACGCTCTTCAGACTTaGGTTCTCCAGCTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: SIYSWAPGGATLWNLKLPHALQT*VLQLQV
Trigger: TACCTGAAGCTGGAGAACCAAAGTCTGAAGAGCGTG...TGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp ATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACCAGGTAGGACTCCCTGAGGTTCTCTaGCTGTTTACTTTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: ILGHREEPLSGILNYQVGLPEVL*LFTLEA
Trigger: AGCTTCCAAAGTAAACAGCAAGAGAACCTCAGGGAG...TCCTACCTGGTAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CAA 90 bp CATCCAGTGGAGAAGAGACTCGGTAGGGACATGCTAAGTAGAGTGAACAGGGGAGGTCATACGATGCTCTaGTTTGTCTGTCTGTCGATT +
Preference number: 5 (lower is better)
Translates to: HPVEKRLGRDMLSRVNRGGHTML*FVCLSI
Trigger: AATCGACAGACAGACAAACAAGAGCATCGTATGACC...TCCCCTGTTCACTCTACTTAGCATGTCCCTACCGAGTCTCTTCTCCACTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS GCA 90 bp AGAACTTCTGCATCTTCTTTAGTGTGTCCTTCAGCACAAACAGGTTaGAGCTCTCCTTGGGGCAGCCATAGAAGGTGTTCAGGTATTGCA +
Preference number: 5 (lower is better)
Translates to: RTSASSLVCPSAQTG*SSPWGSHRRCSGIA
Trigger: TGCAATACCTGAACACCTTCTATGGCTGCCCCAAGGAGAGCTGCAACCTGTTTGTGCTGAAGGACACACTAAAGAAGATGCAGAAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000437642.6
CDS GCA 90 bp AGAACTTCTGCATCTTCTTTAGTGTGTCCTTCAGCACAAACAGGTTaGAGCTCTCCTTGGGGCAGCCATAGAAGGTGTTCAGGTATTGCT +
Preference number: 5 (lower is better)
Translates to: RTSASSLVCPSAQTG*SSPWGSHRRCSGIA
Trigger: AGCAATACCTGAACACCTTCTATGGCTGCCCCAAGGAGAGCTGCAACCTGTTTGTGCTGAAGGACACACTAAAGAAGATGCAGAAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564864.5
ENST00000568715.5
CDS-3UTR CAA 90 bp AAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAAAGCCAGTCCCAGCGGCCAAAGTaGATCATGATGTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: KQTANVRKVLRQPAVKSQSQRPK*IMMSAS
Trigger: AGAGGCAGACATCATGATCAACTTTGGCCGCTGGGA...CTGGCTTTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp AGGGGAACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCAAAGCAGGGCTGCGTaGAAAATATCAAAGTATCTC +
Preference number: 5 (lower is better)
Translates to: RGTITMWAEMHCAVTSDNQSRAA*KISKYL
Trigger: GAGATACTTTGATATTTTCAACGCAGCCCTGCTTTG...GTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGTTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTATTGTACTCCTTGCCATaGAACAAGAAGGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLLYSLP*NKKGNL
Trigger: CAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAA...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp GTCAGCATCTATTCTTGGGCACCGGGAGGAGCCACTCTCTGGAATCTTAAATTACAAATGAACCGGTCCTaGAAGAAGAAGATCTCACCA +
Preference number: 5 (lower is better)
Translates to: VSIYSWAPGGATLWNLKLQMNRS*KKKISP
Trigger: TGGTGAGATCTTCTTCTTCAAGGACCGGTTCATTTG...TAATTTAAGATTCCAGAGAGTGGCTCCTCCCGGTGCCCAAGAATAGATGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000570308.5
CDS-3UTR CAA 90 bp ACCATCACTATGTGGGCTGAGATGCACTGTGCAGTGACTTCAGACAACCTGAGTTATGTCTTCTTGTTTTaGCTCCAGTTAAAGGCGGCA +
Preference number: 5 (lower is better)
Translates to: TITMWAEMHCAVTSDNLSYVFLF*LQLKAA
Trigger: TGCCGCCTTTAACTGGAGCAAAAACAAGAAGACATA...ACTCAGGTTGTCTGAAGTCACTGCACAGTGCATCTCAGCCCACATAGTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp GCTGATTCTTCAGGGCTCTTTCTACAGGACAGAGGGACTAGAGCTTACTCTCCCTTGTATCTCCAGAATTaGTCTCCAGCAAAGATGTAT +
Preference number: 5 (lower is better)
Translates to: ADSSGLFLQDRGTRAYSPLYLQN*SPAKMY
Trigger: ATACATCTTTGCTGGAGACAAATTCTGGAGATACAA...GGGAGAGTAAGCTCTAGTCCCTCTGTCCTGTAGAAAGAGCCCTGAAGAATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS-3UTR CAA 90 bp GATGCACTGTGCAGTGACTTCAGACAACCTGAGTCCTTCTGTCAGGAAATGCAACAAAGCAGGGCTGCGTaGAAAATATCAAAGTATCTC +
Preference number: 5 (lower is better)
Translates to: DALCSDFRQPESFCQEMQQSRAA*KISKYL
Trigger: GAGATACTTTGATATTTTCAACGCAGCCCTGCTTTG...TTGCATTTCCTGACAGAAGGACTCAGGTTGTCTGAAGTCACTGCACAGTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp CATACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAACAGCTGTTGTACTCCTaGCCATTGAACAAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: HTKQTANVRKVLRQPAVKQLLYS*PLNKKG
Trigger: CCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTG...TTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp ACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAAAGCGTGCAGCTCTCATATTaGTTGCCCAGGAAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: TKQTANVRKVLRQPAVKSVQLSY*LPRKVK
Trigger: CTTCACTTTCCTGGGCAACAAATATGAGAGCTGCAC...GCTTTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp GACATGCTAAGTAGAGTGAACAGGGGAACCATCACTATGTGGGCTGAGATGCACTTCTTCTTCACCTCATaGTATCTCCAGAATTTGTCT +
Preference number: 5 (lower is better)
Translates to: DMLSRVNRGTITMWAEMHFFFTS*YLQNLS
Trigger: AGACAAATTCTGGAGATACAATGAGGTGAAGAAGAA...GTGCATCTCAGCCCACATAGTGATGGTTCCCCTGTTCACTCTACTTAGCATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp CATACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAAGTATCAGTGCAGCTGTaGTACTCCTTGCCATTGAAC +
Preference number: 5 (lower is better)
Translates to: HTKQTANVRKVLRQPAVKVSVQL*YSLPLN
Trigger: GTTCAATGGCAAGGAGTACAACAGCTGCACTGATAC...TTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp ACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAAAGCCAAATGAACCGGTCCTaGAAGAAGAAGATCTCACCA +
Preference number: 5 (lower is better)
Translates to: TKQTANVRKVLRQPAVKSQMNRS*KKKISP
Trigger: TGGTGAGATCTTCTTCTTCAAGGACCGGTTCATTTG...GCTTTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000219070.9
ENST00000570308.5
CDS-3UTR CAA 90 bp CATACAAAGCAAACTGCTAATGTAAGAAAGGTTCTAAGGCAGCCAGCAGTGAAACACGTGAAAAGTGCCTaGCACATAGAAAGCACTCTA +
Preference number: 5 (lower is better)
Translates to: HTKQTANVRKVLRQPAVKHVKSA*HIESTL
Trigger: TAGAGTGCTTTCTATGTGCAAGGCACTTTTCACGTG...TTTCACTGCTGGCTGCCTTAGAACCTTTCTTACATTAGCAGTTTGCTTTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CAA 90 bp CCCGGGGGTCGCTGGCTCGGTGCGTGTGGCCGCCTCGCCGCCTGGTaGGAGCCTGCTCCGCGGCGCAGGGCTGCGCTCCGAGGGTCCGCT +
Preference number: 6 (lower is better)
Translates to: PGGRWLGACGRLAAW*EPAPRRRAALRGSA
Trigger: AGCGGACCCTCGGAGCGCAGCCCTGCGCCGCGGAGCAGGCTCCAACCAGGCGGCGAGGCGGCCACACGCACCGAGCCAGCGACCCCCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS GCA 72 bp CGGTGCGTGTGGCCGCCTCGCCGCCTGGTTGGAGCCTaGTCCGCGGCGCAGGGCTGCGCTCCGAGGGTCCGC +
Preference number: 6 (lower is better)
Translates to: RCVWPPRRLVGA*SAAQGCAPRVR
Trigger: GCGGACCCTCGGAGCGCAGCCCTGCGCCGCGGAGCAGGCTCCAACCAGGCGGCGAGGCGGCCACACGCACCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS GCA 72 bp CGCTCCGAGGGTCCGCTGGCTCGGTGGCCTGGGGTTTaGCCGGCTCAGCGGCTCATGGTCCGGCCCCCGCGC +
Preference number: 6 (lower is better)
Translates to: RSEGPLARWPGV*PAQRLMVRPPR
Trigger: GCGCGGGGGCCGGACCATGAGCCGCTGAGCCGGGCAAACCCCAGGCCACCGAGCCAGCGGACCCTCGGAGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 72 bp TGCTCCGCGGCGCAGGGCTGCGCTCCGAGGGTCCGCTaGCTCGGTGGCCTGGGGTTTGCCCGGCTCAGCGGC +
Preference number: 6 (lower is better)
Translates to: CSAAQGCAPRVR*LGGLGFARLSG
Trigger: GCCGCTGAGCCGGGCAAACCCCAGGCCACCGAGCCAGCGGACCCTCGGAGCGCAGCCCTGCGCCGCGGAGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 72 bp GCTGGCTCGGTGCGTGTGGCCGCCTCGCCGCCTGGTTaGAGCCTGCTCCGCGGCGCAGGGCTGCGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: AGSVRVAASPPG*SLLRGAGLRSE
Trigger: CTCGGAGCGCAGCCCTGCGCCGCGGAGCAGGCTCCAACCAGGCGGCGAGGCGGCCACACGCACCGAGCCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CAA 72 bp GCGCTCCGAGGGTCCGCTGGCTCGGTGGCCTGGGGTTaGCCCGGCTCAGCGGCTCATGGTCCGGCCCCCGCG +
Preference number: 6 (lower is better)
Translates to: ALRGSAGSVAWG*PGSAAHGPAPA
Trigger: CGCGGGGGCCGGACCATGAGCCGCTGAGCCGGGCAAACCCCAGGCCACCGAGCCAGCGGACCCTCGGAGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CAA 72 bp CGCTGGCTCGGTGCGTGTGGCCGCCTCGCCGCCTGGTaGGAGCCTGCTCCGCGGCGCAGGGCTGCGCTCCGA +
Preference number: 6 (lower is better)
Translates to: RWLGACGRLAAW*EPAPRRRAALR
Trigger: TCGGAGCGCAGCCCTGCGCCGCGGAGCAGGCTCCAACCAGGCGGCGAGGCGGCCACACGCACCGAGCCAGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 72 bp AGGGCTGCGCTCCGAGGGTCCGCTGGCTCGGTGGCCTaGGGTTTGCCCGGCTCAGCGGCTCATGGTCCGGCC +
Preference number: 6 (lower is better)
Translates to: RAALRGSAGSVA*GLPGSAAHGPA
Trigger: GGCCGGACCATGAGCCGCTGAGCCGGGCAAACCCCAGGCCACCGAGCCAGCGGACCCTCGGAGCGCAGCCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 72 bp GGCGCAGGGCTGCGCTCCGAGGGTCCGCTGGCTCGGTaGCCTGGGGTTTGCCCGGCTCAGCGGCTCATGGTC +
Preference number: 6 (lower is better)
Translates to: GAGLRSEGPLAR*PGVCPAQRLMV
Trigger: GACCATGAGCCGCTGAGCCGGGCAAACCCCAGGCCACCGAGCCAGCGGACCCTCGGAGCGCAGCCCTGCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 72 bp GGGAACTTGATGATGGGCGACGGCGCGGCGGCGGCGTaGCTCAGCAGGCAGCCCAGGAGACAGAGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: GNLMMGDGAAAA*LSRQPRRQSAL
Trigger: GAGGGCGCTCTGTCTCCTGGGCTGCCTGCTGAGCCACGCCGCCGCCGCGCCGTCGCCCATCATCAAGTTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 72 bp CCCAGCCCCCGCCGCCGCCGCCGCCGCCGCAGGTCCTaGCAATCCCTTTGTATGTTTAAAGCCCCAGATGCG +
Preference number: 6 (lower is better)
Translates to: PSPRRRRRRRRS*QSLCMFKAPDA
Trigger: CGCATCTGGGGCTTTAAACATACAAAGGGATTGCCAGGACCTGCGGCGGCGGCGGCGGCGGCGGGGGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CCA 72 bp CATCCACTCGCTGGACATCAGGGGGCAGTCCCAGGCTaGTCAGTGGCTTGGGGTACCCTCGCTCCAGGGTGC +
Preference number: 6 (lower is better)
Translates to: HPLAGHQGAVPG*SVAWGTLAPGC
Trigger: GCACCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCTGGGACTGCCCCCTGATGTCCAGCGAGTGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS GCA 72 bp GTGTTCAGGTATTGGCAACACTGCGGCCAGGCTCAGTaGCCCTCCAGCCAGGCGCGCGCACGCTCACAAGAC +
Preference number: 6 (lower is better)
Translates to: VFRYWQHCGQAQ*PSSQARARSQD
Trigger: GTCTTGTGAGCGTGCGCGCGCCTGGCTGGAGGGGCACTGAGCCTGGCCGCAGTGTTGCCAATACCTGAACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543485.5
CDS CCA 72 bp GGACATCAGGGGGCAGTCCCAGGCTGGTCAGTGGCTTaGGGTACCCTCGCTCCAGGGTGCTGGCTGAGTAGA +
Preference number: 6 (lower is better)
Translates to: GHQGAVPGWSVA*GTLAPGCWLSR
Trigger: TCTACTCAGCCAGCACCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCCTGGGACTGCCCCCTGATGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CAA 72 bp GGCCAGAATGTGGCCACCAGCAGGGGCCCCATGGGCTaGTCACGTGGCGTCACAGTCCGCCAAATGAACCGG +
Preference number: 6 (lower is better)
Translates to: GQNVATSRGPMG*SRGVTVRQMNR
Trigger: CCGGTTCATTTGGCGGACTGTGACGCCACGTGACAAGCCCATGGGGCCCCTGCTGGTGGCCACATTCTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CAA 90 bp GGGAGCTCAGGCCAGAATGTGGCCACCAGCAGGGGCCCCATGGGCTaGTCACGTGGCGTCACAGTCCGCCAAATGAACCGGTCCTTGAAG +
Preference number: 6 (lower is better)
Translates to: GSSGQNVATSRGPMG*SRGVTVRQMNRSLK
Trigger: CTTCAAGGACCGGTTCATTTGGCGGACTGTGACGCCACGTGACAAGCCCATGGGGCCCCTGCTGGTGGCCACATTCTGGCCTGAGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CCA 72 bp TGTGGCCACCAGCAGGGGCCCCATGGGCTTGTCACGTaGCGTCACAGTCCGCCAAATGAACCGGTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: CGHQQGPHGLVT*RHSPPNEPVLE
Trigger: TTCAAGGACCGGTTCATTTGGCGGACTGTGACGCCACGTGACAAGCCCATGGGGCCCCTGCTGGTGGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CCA 72 bp CTGGGTTGCCGCAGCGTGGCTTCCGCATGGTCTCGATaGTATTCTGGTCAAGATCACCTGTCTGGGGCAGTC +
Preference number: 6 (lower is better)
Translates to: LGCRSVASAWSR*YSGQDHLSGAV
Trigger: GACTGCCCCAGACAGGTGATCTTGACCAGAATACCATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 72 bp GGGCTTGCGAGGGAAGAAGTTGTAGTTGGCCACATCTaGGTTGCCGCAGCGTGGCTTCCGCATGGTCTCGAT +
Preference number: 6 (lower is better)
Translates to: GLAREEVVVGHI*VAAAWLPHGLD
Trigger: ATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCTCGCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CAA 90 bp GGCCTGTGGGAGCCAGGGCCAGCTCAGCAGCCTAGCCAGTCGGATTaGATGCTTCCAAACTTCACGCTCTTCAGACTTTGGTTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GLWEPGPAQQPSQSD*MLPNFTLFRLWFSS
Trigger: GCTGGAGAACCAAAGTCTGAAGAGCGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAGGCTGCTGAGCTGGCCCTGGCTCCCACAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000566564.1
ENST00000570308.5
CDS CAA 90 bp CAGGTTGCAGCTCTCCTTGGGGCAGCCATAGAAGGTGTTCAGGTATaGCCACGACCACACAGTGAGCCAGCAGCTATCTTCCCTCCTCGC +
Preference number: 6 (lower is better)
Translates to: QVAALLGAAIEGVQV*PRPHSEPAAIFPPR
Trigger: GCGAGGAGGGAAGATAGCTGCTGGCTCACTGTGTGGTCGTGGCAATACCTGAACACCTTCTATGGCTGCCCCAAGGAGAGCTGCAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS GCA 72 bp AGTTGTAGGTGGTGGAGCACCAGAGGAAGCCATCGCTaGGGCCGGTATCAGTGCAGCTGTTGTACTCCTTGC +
Preference number: 6 (lower is better)
Translates to: SCRWWSTRGSHR*GRYQCSCCTPC
Trigger: GCAAGGAGTACAACAGCTGCACTGATACCGGCCGCAGCGATGGCTTCCTCTGGTGCTCCACCACCTACAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS GCA 72 bp AGTTGGCTGTGGTCGCACACCACATCTTTCCGTCACTaGGGCCGGCGCTGGTGCAGCTCTCATATTTGTTGC +
Preference number: 6 (lower is better)
Translates to: SWLWSHTTSFRH*GRRWCSSHICC
Trigger: GCAACAAATATGAGAGCTGCACCAGCGCCGGCCGCAGTGACGGAAAGATGTGGTGTGCGACCACAGCCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS GCA 72 bp GGCTGGTCAGTGGCTTGGGGTACCCTCGCTCCAGGGTaGTGGCTGAGTAGATCCAGTATTCATTCCCTGCAA +
Preference number: 6 (lower is better)
Translates to: GWSVAWGTLAPG*WLSRSSIHSLQ
Trigger: TTGCAGGGAATGAATACTGGATCTACTCAGCCAGCACCCTGGAGCGAGGGTACCCCAAGCCACTGACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CCA 72 bp TTGTTTTTGCTCCAGTTAAAGGCGGCATCCACTCGCTaGACATCAGGGGGCAGTCCCAGGCTGGTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LFLLQLKAASTR*TSGGSPRLVSG
Trigger: GCCACTGACCAGCCTGGGACTGCCCCCTGATGTCCAGCGAGTGGATGCCGCCTTTAACTGGAGCAAAAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CCA 72 bp TGGCTTGCCCATTCTTCATCCTGGTTGGGTCGAGGGTaGGGCTGGGCAGTGACCAGTCATCGGGTTCTCAAT +
Preference number: 6 (lower is better)
Translates to: WLAHSSSWLGRG*GWAVTSHRVLN
Trigger: ATTGAGAACCCGATGACTGGTCACTGCCCAGCCCCACCCTCGACCCAACCAGGATGAAGAATGGGCAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CAA 90 bp CCATCGCTGCGGCCGGTATCAGTGCAGCTGTTGTACTCCTTGCCATaGAACAAGAAGGGGAACTTGCAGTACTCCCCATCGGCGTTCCCA +
Preference number: 6 (lower is better)
Translates to: PSLRPVSVQLLYSLP*NKKGNLQYSPSAFP
Trigger: TGGGAACGCCGATGGGGAGTACTGCAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTGCACTGATACCGGCCGCAGCGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS CAA 90 bp AGGAAGCCATCGCTGCGGCCGGTATCAGTGCAGCTGTTGTACTCCTaGCCATTGAACAAGAAGGGGAACTTGCAGTACTCCCCATCGGCG +
Preference number: 6 (lower is better)
Translates to: RKPSLRPVSVQLLYS*PLNKKGNLQYSPSA
Trigger: CGCCGATGGGGAGTACTGCAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTGCACTGATACCGGCCGCAGCGATGGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS GCA 72 bp TGCGAGGGAAGAAGTTGTAGTTGGCCACATCTGGGTTaGCGCAGCGTGGCTTCCGCATGGTCTCGATGGTAT +
Preference number: 6 (lower is better)
Translates to: CEGRSCSWPHLG*RSVASAWSRWY
Trigger: ATACCATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAACTACAACTTCTTCCCTCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 72 bp GTCTGCCTCTCCATCATGGATTCGAGAAAACCGCAGTaGGGTCACATCGCTCCAGACTTGGAAGGCACGAGC +
Preference number: 6 (lower is better)
Translates to: VCLSIMDSRKPQ*GHIAPDLEGTS
Trigger: GCTCGTGCCTTCCAAGTCTGGAGCGATGTGACCCCACTGCGGTTTTCTCGAATCCATGATGGAGAGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 72 bp AGCCAGCAGCTATCTTCCCTCCTCGCTCTTGGCACGTaGGGGGCAGAAAGAAGGAGCATTTGTCATCAGGAG +
Preference number: 6 (lower is better)
Translates to: SQQLSSLLALGT*GAERRSICHQE
Trigger: CTCCTGATGACAAATGCTCCTTCTTTCTGCCCCCCACGTGCCAAGAGCGAGGAGGGAAGATAGCTGCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CAA 90 bp GAGCACCAGAGGAAGCCATCGCTGCGGCCGGTATCAGTGCAGCTGTaGTACTCCTTGCCATTGAACAAGAAGGGGAACTTGCAGTACTCC +
Preference number: 6 (lower is better)
Translates to: EHQRKPSLRPVSVQL*YSLPLNKKGNLQYS
Trigger: GGAGTACTGCAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTGCACTGATACCGGCCGCAGCGATGGCTTCCTCTGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS TCA 72 bp CAGTGGCTTGGGGTACCCTCGCTCCAGGGTGCTGGCTaGGTAGATCCAGTATTCATTCCCTGCAAAGAACAC +
Preference number: 6 (lower is better)
Translates to: QWLGVPSLQGAG*VDPVFIPCKEH
Trigger: GTGTTCTTTGCAGGGAATGAATACTGGATCTACTCAGCCAGCACCCTGGAGCGAGGGTACCCCAAGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS TCA 72 bp GACTTTGGTTCTCCAGCTTCAGGTAATAGGCACCCTTaGAGAAGTAGCTGTGACCGCCGCCCTGCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: DFGSPASGNRHP*RSSCDRRPAGP
Trigger: TGGACCTGCAGGGCGGCGGTCACAGCTACTTCTTCAAGGGTGCCTATTACCTGAAGCTGGAGAACCAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS CCA 72 bp GAAGTTGTAGTTGGCCACATCTGGGTTGCCGCAGCGTaGCTTCCGCATGGTCTCGATGGTATTCTGGTCAAG +
Preference number: 6 (lower is better)
Translates to: EVVVGHIWVAAA*LPHGLDGILVK
Trigger: CTTGACCAGAATACCATCGAGACCATGCGGAAGCCACGCTGCGGCAACCCAGATGTGGCCAACTACAACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 72 bp CGAGAAAACCGCAGTGGGGTCACATCGCTCCAGACTTaGAAGGCACGAGCAAAGGCATCATCCACTGTCTCT +
Preference number: 6 (lower is better)
Translates to: RENRSGVTSLQT*KARAKASSTVS
Trigger: AGAGACAGTGGATGATGCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGTGACCCCACTGCGGTTTTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 72 bp TGGTCAGTGGCTTGGGGTACCCTCGCTCCAGGGTGCTaGCTGAGTAGATCCAGTATTCATTCCCTGCAAAGA +
Preference number: 6 (lower is better)
Translates to: WSVAWGTLAPGC*LSRSSIHSLQR
Trigger: TCTTTGCAGGGAATGAATACTGGATCTACTCAGCCAGCACCCTGGAGCGAGGGTACCCCAAGCCACTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CCA 72 bp GTGGGGCTGGGCAGTGACCAGTCATCGGGTTCTCAATaGAGATGGAGTATCCACTGCTGTGATGTAGAGTCC +
Preference number: 6 (lower is better)
Translates to: VGLGSDQSSGSQ*RWSIHCCDVES
Trigger: GGACTCTACATCACAGCAGTGGATACTCCATCTCCATTGAGAACCCGATGACTGGTCACTGCCCAGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CCA 72 bp GGGGCAGAAAGAAGGAGCATTTGTCATCAGGAGGCCTaGGTTCTCCTAGCTGCACTTTGCGAGCAAGAGCTC +
Preference number: 6 (lower is better)
Translates to: GAERRSICHQEA*VLLAALCEQEL
Trigger: GAGCTCTTGCTCGCAAAGTGCAGCTAGGAGAACCCAGGCCTCCTGATGACAAATGCTCCTTCTTTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CAA 72 bp GTGTTCAGGTATTGCACTGCCAACTCTTTGTCCGTTTaGGGGGCGACATCGCCGGGGAACTTGATGATGGGC +
Preference number: 6 (lower is better)
Translates to: VFRYCTANSLSV*GATSPGNLMMG
Trigger: GCCCATCATCAAGTTCCCCGGCGATGTCGCCCCCAAAACGGACAAAGAGTTGGCAGTGCAATACCTGAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000219070.9
CDS CAA 72 bp TCGAGAAAACCGCAGTGGGGTCACATCGCTCCAGACTaGGAAGGCACGAGCAAAGGCATCATCCACTGTCTC +
Preference number: 6 (lower is better)
Translates to: SRKPQWGHIAPD*EGTSKGIIHCL
Trigger: GAGACAGTGGATGATGCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGTGACCCCACTGCGGTTTTCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CAA 72 bp GAGCCAGGGCCAGCTCAGCAGCCTAGCCAGTCGGATTaGATGCTTCCAAACTTCACGCTCTTCAGACTTTGG +
Preference number: 6 (lower is better)
Translates to: EPGPAQQPSQSD*MLPNFTLFRLW
Trigger: CCAAAGTCTGAAGAGCGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAGGCTGCTGAGCTGGCCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000566564.1
ENST00000570308.5
CDS CAA 72 bp GCTCTCCTTGGGGCAGCCATAGAAGGTGTTCAGGTATaGCCACGACCACACAGTGAGCCAGCAGCTATCTTC +
Preference number: 6 (lower is better)
Translates to: ALLGAAIEGVQV*PRPHSEPAAIF
Trigger: GAAGATAGCTGCTGGCTCACTGTGTGGTCGTGGCAATACCTGAACACCTTCTATGGCTGCCCCAAGGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CAA 90 bp ATCATGGATTCGAGAAAACCGCAGTGGGGTCACATCGCTCCAGACTaGGAAGGCACGAGCAAAGGCATCATCCACTGTCTCTGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: IMDSRKPQWGHIAPD*EGTSKGIIHCLWVQ
Trigger: CTGGACCCAGAGACAGTGGATGATGCCTTTGCTCGTGCCTTCCAAGTCTGGAGCGATGTGACCCCACTGCGGTTTTCTCGAATCCATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS TCA 72 bp GGCCGGTATCAGTGCAGCTGTTGTACTCCTTGCCATTaGACAAGAAGGGGAACTTGCAGTACTCCCCATCGG +
Preference number: 6 (lower is better)
Translates to: GRYQCSCCTPCH*TRRGTCSTPHR
Trigger: CCGATGGGGAGTACTGCAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTGCACTGATACCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS TCA 72 bp AGCCAGGGCCAGCTCAGCAGCCTAGCCAGTCGGATTTaGTGCTTCCAAACTTCACGCTCTTCAGACTTTGGT +
Preference number: 6 (lower is better)
Translates to: SQGQLSSLASRI*CFQTSRSSDFG
Trigger: ACCAAAGTCTGAAGAGCGTGAAGTTTGGAAGCATCAAATCCGACTGGCTAGGCTGCTGAGCTGGCCCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000566564.1
ENST00000570308.5
CDS TCA 72 bp CATAGAAGGTGTTCAGGTATTGCCACGACCACACAGTaGGCCAGCAGCTATCTTCCCTCCTCGCTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: HRRCSGIATTTQ*ASSYLPSSLLA
Trigger: TGCCAAGAGCGAGGAGGGAAGATAGCTGCTGGCTCACTGTGTGGTCGTGGCAATACCTGAACACCTTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS GCA 72 bp GCCATGCTCCCAGCGGCCAAAGTTGATCATGATGTCTaGCTCTCCATCATGGATTCGAGAAAACCGCAGTGG +
Preference number: 6 (lower is better)
Translates to: AMLPAAKVDHDV*LSIMDSRKPQW
Trigger: CCACTGCGGTTTTCTCGAATCCATGATGGAGAGGCAGACATCATGATCAACTTTGGCCGCTGGGAGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS GCA 72 bp TGGGTTCTCCTAGCTGCACTTTGCGAGCAAGAGCTCTaGAAAAGTGAGATGGTGTCACTGGGGTGGGACTTG +
Preference number: 6 (lower is better)
Translates to: WVLLAALCEQEL*KSEMVSLGWDL
Trigger: CAAGTCCCACCCCAGTGACACCATCTCACTTTTGCAGAGCTCTTGCTCGCAAAGTGCAGCTAGGAGAACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CCA 72 bp CTGGGCAGTGACCAGTCATCGGGTTCTCAATGGAGATaGAGTATCCACTGCTGTGATGTAGAGTCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: LGSDQSSGSQWR*SIHCCDVESSP
Trigger: AGGGCTGGACTCTACATCACAGCAGTGGATACTCCATCTCCATTGAGAACCCGATGACTGGTCACTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CAA 72 bp TCGCTGCGGCCGGTATCAGTGCAGCTGTTGTACTCCTaGCCATTGAACAAGAAGGGGAACTTGCAGTACTCC +
Preference number: 6 (lower is better)
Translates to: SLRPVSVQLLYS*PLNKKGNLQYS
Trigger: GGAGTACTGCAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTGCACTGATACCGGCCGCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS CAA 72 bp AGGAAGCCATCGCTGCGGCCGGTATCAGTGCAGCTGTaGTACTCCTTGCCATTGAACAAGAAGGGGAACTTG +
Preference number: 6 (lower is better)
Translates to: RKPSLRPVSVQL*YSLPLNKKGNL
Trigger: CAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTGCACTGATACCGGCCGCAGCGATGGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS GCA 72 bp CAGTCATCGGGTTCTCAATGGAGATGGAGTATCCACTaGTGTGATGTAGAGTCCAGCCCTAGGGCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: QSSGSQWRWSIH*CDVESSPRACR
Trigger: TCTGCAAGCCCTAGGGCTGGACTCTACATCACAGCAGTGGATACTCCATCTCCATTGAGAACCCGATGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CAA 72 bp AAGGGGTATCCATCGCCATGCTCCCAGCGGCCAAAGTaGATCATGATGTCTGCCTCTCCATCATGGATTCGA +
Preference number: 6 (lower is better)
Translates to: KGYPSPCSQRPK*IMMSASPSWIR
Trigger: TCGAATCCATGATGGAGAGGCAGACATCATGATCAACTTTGGCCGCTGGGAGCATGGCGATGGATACCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CAA 90 bp TCAGTGCAGCTGTTGTACTCCTTGCCATTGAACAAGAAGGGGAACTaGCAGTACTCCCCATCGGCGTTCCCATACTTCACACGGACCACT +
Preference number: 6 (lower is better)
Translates to: SVQLLYSLPLNKKGN*QYSPSAFPYFTRTT
Trigger: AGTGGTCCGTGTGAAGTATGGGAACGCCGATGGGGAGTACTGCAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAACAGCTGCACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS CAA 90 bp TGTCACTGGGGTGGGACTTGTTGGCCCCTGGGTCATACGATGCTCTaGTTTGTCTGTCTGTCGATTACTGTAGCTATCTGGCTTGCCCAT +
Preference number: 6 (lower is better)
Translates to: CHWGGTCWPLGHTML*FVCLSITVAIWLAH
Trigger: ATGGGCAAGCCAGATAGCTACAGTAATCGACAGACAGACAAACAAGAGCATCGTATGACCCAGGGGCCAACAAGTCCCACCCCAGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CAA 72 bp CCCACTGCATTGCCTCTGGACAACACAGACTTCCATTaGTCAGAGGTGTTCAAACCAGGCACCTCCATCTTG +
Preference number: 6 (lower is better)
Translates to: PTALPLDNTDFH*SEVFKPGTSIL
Trigger: CAAGATGGAGGTGCCTGGTTTGAACACCTCTGACAAATGGAAGTCTGTGTTGTCCAGAGGCAATGCAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437642.6
CDS CAA 72 bp GGTGGGACTTGTTGGCCCCTGGGTCATACGATGCTCTaGTTTGTCTGTCTGTCGATTACTGTAGCTATCTGG +
Preference number: 6 (lower is better)
Translates to: GGTCWPLGHTML*FVCLSITVAIW
Trigger: CCAGATAGCTACAGTAATCGACAGACAGACAAACAAGAGCATCGTATGACCCAGGGGCCAACAAGTCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS GCA 72 bp GCATCTTCTTTAGTGTGTCCTTCAGCACAAACAGGTTaGAGCTCTCCTTGGGGCAGCCATAGAAGGTGTTCA +
Preference number: 6 (lower is better)
Translates to: ASSLVCPSAQTG*SSPWGSHRRCS
Trigger: TGAACACCTTCTATGGCTGCCCCAAGGAGAGCTGCAACCTGTTTGTGCTGAAGGACACACTAAAGAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CCA 72 bp CTCTTGTTTGTCTGTCTGTCGATTACTGTAGCTATCTaGCTTGCCCATTCTTCATCCTGGTTGGGTCGAGGG +
Preference number: 6 (lower is better)
Translates to: LLFVCLSITVAI*LAHSSSWLGRG
Trigger: CCCTCGACCCAACCAGGATGAAGAATGGGCAAGCCAGATAGCTACAGTAATCGACAGACAGACAAACAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570308.5
CDS CAA 72 bp CTGTTGTACTCCTTGCCATTGAACAAGAAGGGGAACTaGCAGTACTCCCCATCGGCGTTCCCATACTTCACA +
Preference number: 6 (lower is better)
Translates to: LLYSLPLNKKGN*QYSPSAFPYFT
Trigger: TGTGAAGTATGGGAACGCCGATGGGGAGTACTGCAAGTTCCCCTTCTTGTTCAATGGCAAGGAGTACAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000570308.5
CDS CAA 72 bp GCTCTCCTTGGGGCAGCCATAGAAGGTGTTCAGGTATaGCATGTGCTAGGTAAGCACCTAAGATTACCTCTC +
Preference number: 6 (lower is better)
Translates to: ALLGAAIEGVQV*HVLGKHLRLPL
Trigger: GAGAGGTAATCTTAGGTGCTTACCTAGCACATGCAATACCTGAACACCTTCTATGGCTGCCCCAAGGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437642.6
CDS GCA 72 bp CGGTCTAAGTCCAGAGTTATCTTCTTAAGCCCCCACTaGATTGCCTCTGGACAACACAGACTTCCATTTGTC +
Preference number: 6 (lower is better)
Translates to: RSKSRVIFLSPH*IASGQHRLPFV
Trigger: GACAAATGGAAGTCTGTGTTGTCCAGAGGCAATGCAGTGGGGGCTTAAGAAGATAACTCTGGACTTAGACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437642.6
CDS CAA 90 bp TATCTCCAGAATTTGTCTCCAGCAAAGATGTATGTCTTCTTGTTTTaGCTCCAGTTAAAGGCGGCATCCACTCGCTGGACATCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: YLQNLSPAKMYVFLF*LQLKAASTRWTSGG
Trigger: GCCCCCTGATGTCCAGCGAGTGGATGCCGCCTTTAACTGGAGCAAAAACAAGAAGACATACATCTTTGCTGGAGACAAATTCTGGAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS TCA 72 bp TCATCACTAGGCCAGCTGGTTGGTTCATGCACTCTTTaGTTTGAAGCCAAGCGGTCTAAGTCCAGAGTTATC +
Preference number: 6 (lower is better)
Translates to: SSLGQLVGSCTL*FEAKRSKSRVI
Trigger: GATAACTCTGGACTTAGACCGCTTGGCTTCAAATCAAAGAGTGCATGAACCAACCAGCTGGCCTAGTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437642.6
CDS CCA 72 bp CAGAGTTATCTTCTTAAGCCCCCACTGCATTGCCTCTaGACAACACAGACTTCCATTTGTCAGAGGTGTTCA +
Preference number: 6 (lower is better)
Translates to: QSYLLKPPLHCL*TTQTSICQRCS
Trigger: TGAACACCTCTGACAAATGGAAGTCTGTGTTGTCCAGAGGCAATGCAGTGGGGGCTTAAGAAGATAACTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437642.6
CDS CCA 72 bp ATGGTCTCGATGGTATTCTGGTCAAGATCACCTGTCTaGGGCAGTCCAAAGAACTTCTGCATCTTCTTTAGT +
Preference number: 6 (lower is better)
Translates to: MVSMVFWSRSPV*GSPKNFCIFFS
Trigger: ACTAAAGAAGATGCAGAAGTTCTTTGGACTGCCCCAGACAGGTGATCTTGACCAGAATACCATCGAGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000564864.5
ENST00000568715.5
ENST00000570308.5
CDS CAA 72 bp CTCCAGAATTTGTCTCCAGCAAAGATGTATGTCTTCTaGTTTTTGCTCCAGTTAAAGGCGGCATCCACTCGC +
Preference number: 6 (lower is better)
Translates to: LQNLSPAKMYVF*FLLQLKAASTR
Trigger: GCGAGTGGATGCCGCCTTTAACTGGAGCAAAAACAAGAAGACATACATCTTTGCTGGAGACAAATTCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CAA 72 bp GGATTTGATGCTTCCAAACTTCACGCTCTTCAGACTTaGGTTCTCCAGCTTCAGGTAATAGGCACCCTTGAA +
Preference number: 6 (lower is better)
Translates to: GFDASKLHALQT*VLQLQVIGTLE
Trigger: TTCAAGGGTGCCTATTACCTGAAGCTGGAGAACCAAAGTCTGAAGAGCGTGAAGTTTGGAAGCATCAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570308.5
CDS CAA 72 bp AATTTGTCTCCAGCAAAGATGTATGTCTTCTTGTTTTaGCTCCAGTTAAAGGCGGCATCCACTCGCTGGACA +
Preference number: 6 (lower is better)
Translates to: NLSPAKMYVFLF*LQLKAASTRWT
Trigger: TGTCCAGCGAGTGGATGCCGCCTTTAACTGGAGCAAAAACAAGAAGACATACATCTTTGCTGGAGACAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5
CDS CAA 90 bp TCATTGTATCTCCAGAATTTGTCTCCAGCAAAGATGTATGTCTTCTaGTTTTTGCTCCAGTTAAAGGCGGCATCCACTCGCTGGACATCA +
Preference number: 6 (lower is better)
Translates to: SLYLQNLSPAKMYVF*FLLQLKAASTRWTS
Trigger: TGATGTCCAGCGAGTGGATGCCGCCTTTAACTGGAGCAAAAACAAGAAGACATACATCTTTGCTGGAGACAAATTCTGGAGATACAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000219070.9
ENST00000437642.6
ENST00000543485.5
ENST00000570283.1
ENST00000570308.5