RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMP19 (Homo sapiens)

Ensembl gene IDs: ENSG00000123342

Ensembl transcript IDs: ENST00000322569.9, ENST00000409200.7, ENST00000547487.5, ENST00000547685.5, ENST00000548629.5, ENST00000548882.5, ENST00000552763.1, ENST00000552872.5

Found 724 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCTCGTCCCACTGCCAGTACCCGGAGCCCTGGATATGGGATGGGTaGGGAGAGGGGAGAGGAAGAGGAGAGAGCTTAGGACCCCCAGGG +
Preference number: 1 (lower is better)
Translates to: SSSHCQYPEPWIWDG*GEGRGRGESLGPPG
Trigger: CCCTGGGGGTCCTAAGCTCTCTCCTCTTCCTCTCCCCTCTCCCCACCCATCCCATATCCAGGGCTCCGGGTACTGGCAGTGGGACGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR GCA 90 bp GGTAGGTCCCCTCAGTCCAGAACTCGTCTTCGTCGAAGTGCACACTaGCCAGCTCTGGGATGTCGGCATGGGCCAGGACTCTCCCAGGCC +
Preference number: 1 (lower is better)
Translates to: GRSPQSRTRLRRSAH*PALGCRHGPGLSQA
Trigger: GGCCTGGGAGAGTCCTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGAGTTCTGGACTGAGGGGACCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CCA 90 bp GCCATGAGGGCCTGGGAATATCGGGAGTGCCCAAGCCCCAGAGCATaGCCCACTTCATGGGCTGCAATGATGCGCAGGTTCACCCCACGG +
Preference number: 1 (lower is better)
Translates to: AMRAWEYRECPSPRA*PTSWAAMMRRFTPR
Trigger: CCGTGGGGTGAACCTGCGCATCATTGCAGCCCATGAAGTGGGCCATGCTCTGGGGCTTGGGCACTCCCGATATTCCCAGGCCCTCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR GCA 90 bp CTTTGGCGGCCATGGAAGGAGAGGCGGATGTCAGCCGCACCAGCCTaGACCTCTTGGAAGGTCAAGGGAGCCACATTGCTCCAGTCCTGG +
Preference number: 1 (lower is better)
Translates to: LWRPWKERRMSAAPA*TSWKVKGATLLQSW
Trigger: CCAGGACTGGAGCAATGTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGGTGCGGCTGACATCCGCCTCTCCTTCCATGGCCGCCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CCA 90 bp ATCATCTGGGTGCAGCTTAAAGTGGGGCCGGTAGCCCTCGTAGACTaGGGCCATGAGGGCCTGGGAATATCGGGAGTGCCCAAGCCCCAG +
Preference number: 1 (lower is better)
Translates to: IIWVQLKVGPVALVD*GHEGLGISGVPKPQ
Trigger: CTGGGGCTTGGGCACTCCCGATATTCCCAGGCCCTCATGGCCCCAGTCTACGAGGGCTACCGGCCCCACTTTAAGCTGCACCCAGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR CCA 90 bp ACCGCCTGCCAACAGCCTGGAGGGGAGGGGCCTCACCCAGCATCATaGCATCCAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTT +
Preference number: 1 (lower is better)
Translates to: TACQQPGGEGPHPAS*HPVHYCKGLAWDWV
Trigger: AACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATGCCATGATGCTGGGTGAGGCCCCTCCCCTCCAGGCTGTTGGCAGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
3UTR CCA 90 bp GTTCGGGCTAGCTCGTCCCACTGCCAGTACCCGGAGCCCTGGATATaGGATGGGTGGGGAGAGGGGAGAGGAAGAGGAGAGAGCTTAGGA +
Preference number: 1 (lower is better)
Translates to: VRASSSHCQYPEPWI*DGWGEGRGRGESLG
Trigger: TCCTAAGCTCTCTCCTCTTCCTCTCCCCTCTCCCCACCCATCCCATATCCAGGGCTCCGGGTACTGGCAGTGGGACGAGCTAGCCCGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR CCA 90 bp AAGTCAGTTCGGGCTAGCTCGTCCCACTGCCAGTACCCGGAGCCCTaGATATGGGATGGGTGGGGAGAGGGGAGAGGAAGAGGAGAGAGC +
Preference number: 1 (lower is better)
Translates to: KSVRASSSHCQYPEP*IWDGWGEGRGRGES
Trigger: GCTCTCTCCTCTTCCTCTCCCCTCTCCCCACCCATCCCATATCCAGGGCTCCGGGTACTGGCAGTGGGACGAGCTAGCCCGAACTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR CCA 90 bp CCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTGGCGGCCATaGAAGGAGAGGCGGATGTCAGCCGCACCAGCCTGCACCTCTTGG +
Preference number: 1 (lower is better)
Translates to: PGPSKVLEQYELWRP*KERRMSAAPACTSW
Trigger: CCAAGAGGTGCAGGCTGGTGCGGCTGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CCA 90 bp AGGACTCTCCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTaGCGGCCATGGAAGGAGAGGCGGATGTCAGCCGCACCAGCCTGC +
Preference number: 1 (lower is better)
Translates to: RTLPGPSKVLEQYEL*RPWKERRMSAAPAC
Trigger: GCAGGCTGGTGCGGCTGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGGAGAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CCA 90 bp TGGACTCTTCTTGCCATAGAGAGCCTGGATCCCTGCCACATCATCTaGGTGCAGCTTAAAGTGGGGCCGGTAGCCCTCGTAGACTGGGGC +
Preference number: 1 (lower is better)
Translates to: WTLLAIESLDPCHII*VQLKVGPVALVDWG
Trigger: GCCCCAGTCTACGAGGGCTACCGGCCCCACTTTAAGCTGCACCCAGATGATGTGGCAGGGATCCAGGCTCTCTATGGCAAGAAGAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR CCA 90 bp TTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTaGGGGCACAGTGGGCAGCTCTGTCTCTTCTTCTTCCTCATCCCT +
Preference number: 1 (lower is better)
Translates to: FTTARVWHGTGFCGH*GHSGQLCLFFFLIP
Trigger: AGGGATGAGGAAGAAGAAGAGACAGAGCTGCCCACTGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
3UTR CCA 90 bp CATCCAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTaGGCACTGGGGGCACAGTGGGCAGCTCTGTCTCTTCTTCTTCCT +
Preference number: 1 (lower is better)
Translates to: HPVHYCKGLAWDWVL*ALGAQWAALSLLLP
Trigger: AGGAAGAAGAAGAGACAGAGCTGCCCACTGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
3UTR GCA 90 bp CCCCCTCTGACTCTCCTGCGCAGGGTCTGTTCCTGGTTTCCCAGATaGATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAA +
Preference number: 1 (lower is better)
Translates to: PPLTLLRRVCSWFPR*IKEDISLPWAARLQ
Trigger: TTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGCAGGAGAGTCAGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR CCA 90 bp TGCTTCTTTCTCCAGCGGCCCAGCAACAGGTATTTAAGGGTCTTCTaGTTGAAGGGATCCTCTAGGCCACAACGAGGCTGCCTCATGCGG +
Preference number: 1 (lower is better)
Translates to: CFFLQRPSNRYLRVF*LKGSSRPQRGCLMR
Trigger: CCGCATGAGGCAGCCTCGTTGTGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATACCTGTTGCTGGGCCGCTGGAGAAAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CCA 90 bp GTAGACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTaGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAGCTGCT +
Preference number: 1 (lower is better)
Translates to: VDSAILPTHSSRGLV*HSRKQTLDWFGVAA
Trigger: AGCAGCTACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR TCA 90 bp AAATGCACAGGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTaGGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTA +
Preference number: 1 (lower is better)
Translates to: KCTGKWWLELEVLEA*DLRSCACYSTCKVL
Trigger: TAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCCTGTGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
3UTR TCA 90 bp GGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTaGGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGG +
Preference number: 1 (lower is better)
Translates to: GGGASGVNVQDCVCG*AVSIQTWFLWLREW
Trigger: CCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR CCA 90 bp TCTCCCTCCCCATGTCACATGTCTCCTTCCATGGTCATTAATGCCTaGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCC +
Preference number: 1 (lower is better)
Translates to: SPSPCHMSPSMVINA*GLTSIAHAEVPCHS
Trigger: GGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGCATTAATGACCATGGAAGGAGACATGTGACATGGGGAGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
3UTR TCA 90 bp GAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTaGGCAGACAGGTATTTCATTCAGCTATTAGGCCTTAGGCTTCTG +
Preference number: 1 (lower is better)
Translates to: EIYGLAPATAPARFY*ADRYFIQLLGLRLL
Trigger: CAGAAGCCTAAGGCCTAATAGCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
3UTR GCA 90 bp GCCCTTAAAGAGGAACACCTTTTGGTTGAGAGGCCAATAGAGAGCTaGATCCAGGTTAGGTTCTACCCTATTCAGCTTCTTGGGGAAGCC +
Preference number: 1 (lower is better)
Translates to: ALKEEHLLVERPIES*IQVRFYPIQLLGEA
Trigger: GGCTTCCCCAAGAAGCTGAATAGGGTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCTCTCAACCAAAAGGTGTTCCTCTTTAAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR GCA 90 bp TACCTTAAAGAGGAACACCTTTTGGTTGAGAGGCCAATAGAGAGCTaGATCCAGGTTAGGTTCTACCCTATTCAGCTTCTTGGGGAAGCC +
Preference number: 1 (lower is better)
Translates to: YLKEEHLLVERPIES*IQVRFYPIQLLGEA
Trigger: GGCTTCCCCAAGAAGCTGAATAGGGTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCTCTCAACCAAAAGGTGTTCCTCTTTAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR CCA 90 bp ACAAAGAGGACTCAGAATGCTTTGTTGCTCAGAGCGTTTCAGCTTTaGTCCACTCAACAAAACAAAAGCCCTGCAGATAGCTATTCCTCC +
Preference number: 1 (lower is better)
Translates to: TKRTQNALLLRAFQL*STQQNKSPADSYSS
Trigger: GGAGGAATAGCTATCTGCAGGGCTTTTGTTTTGTTGAGTGGACCAAAGCTGAAACGCTCTGAGCAACAAAGCATTCTGAGTCCTCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR CAA 90 bp CTCTTGGAAGGTCAAGGGAGCCACATTGCTCCAGTCCTGGAAGGCTaGACGCAGGGCTGCCCGGGCTGTGTGGGGTGGAAGGGTGGAGGG +
Preference number: 2 (lower is better)
Translates to: LLEGQGSHIAPVLEG*TQGCPGCVGWKGGG
Trigger: CCCTCCACCCTTCCACCCCACACAGCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTGGAGCAATGTGGCTCCCTTGACCTTCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CAA 90 bp GCCATGGAAGGAGAGGCGGATGTCAGCCGCACCAGCCTGCACCTCTaGGAAGGTCAAGGGAGCCACATTGCTCCAGTCCTGGAAGGCTTG +
Preference number: 2 (lower is better)
Translates to: AMEGEADVSRTSLHL*EGQGSHIAPVLEGL
Trigger: CAAGCCTTCCAGGACTGGAGCAATGTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGGTGCGGCTGACATCCGCCTCTCCTTCCATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR GCA 90 bp AGACAGCAGCATCCAGGTTTCCGGGGAGCCCCTCCCAAAGGGCAGACACTCGGAGCCCACTTCATGGGCTaGAATGATGCGCAGGTTCAC +
Preference number: 2 (lower is better)
Translates to: RQQHPGFRGAPPKGQTLGAHFMG*NDAQVH
Trigger: GTGAACCTGCGCATCATTGCAGCCCATGAAGTGGGC...TCCGAGTGTCTGCCCTTTGGGAGGGGCTCCCCGGAAACCTGGATGCTGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp TCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCACACCAGCCTGCACCTCTTaGAAGGTCAAGGGAGCCACA +
Preference number: 2 (lower is better)
Translates to: SLLQGSGMGLGSVGTGGTPACTS*KVKGAT
Trigger: TGTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGG...TGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CAA 90 bp CAGGACTCTCCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTaGGCGGCCATGGAAGGAGAGGCGGATGTCAGCCGCACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: QDSPRPIKSIGTVRA*AAMEGEADVSRTSL
Trigger: CAGGCTGGTGCGGCTGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGGAGAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR TCA 90 bp GACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTGTTTGGGGTAGCTGCTaGAGTCAGTTCGGGCTAGCT +
Preference number: 2 (lower is better)
Translates to: DSAILPTHSSRGLVWHSRVWGSC*SQFGLA
Trigger: AGCTAGCCCGAACTGACTTCAGCAGCTACCCCAAAC...ACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp ATCATCTGGGTGCAGCTTAAAGTGGGGCCGGTAGCCCTCGTAGACTGGGGCCATCTCGAAGCTGCTGGTTaGGGCGCCAGTAGACTTTGC +
Preference number: 2 (lower is better)
Translates to: IIWVQLKVGPVALVDWGHLEAAG*GASRLC
Trigger: GCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAG...ATGGCCCCAGTCTACGAGGGCTACCGGCCCCACTTTAAGCTGCACCCAGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp AGACAGCAGCATCCAGGTTTCCGGGGAGCCCCTCCCAAAGGGCAGACACTCGGATGGTATCCAAGGTTATaGCCGTACCTGAGGGAGTGG +
Preference number: 2 (lower is better)
Translates to: RQQHPGFRGAPPKGQTLGWYPRL*PYLREW
Trigger: CCACTCCCTCAGGTACGGGCATAACCTTGGATACCA...TCCGAGTGTCTGCCCTTTGGGAGGGGCTCCCCGGAAACCTGGATGCTGCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTAGGCCACAACGAGGCTaGCTCATGCGGGCCCTTGTG +
Preference number: 2 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGRPQRG*LMRALV
Trigger: CACAAGGGCCCGCATGAGGCAGCCTCGTTGTGGCCT...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR GCA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACGGCTTGACGCAGGGCTaGCCGGGCTGTGTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDGLTQG*PGCVGW
Trigger: CCACCCCACACAGCCCGGGCAGCCCTGCGTCAAGCC...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR GCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTTCAGGATCAGCAGGCTaGCCCCACCGCCTGCCAACA +
Preference number: 2 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGSGSAG*PHRLPT
Trigger: TGTTGGCAGGCGGTGGGGGCAGCCTGCTGATCCTGA...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp TACAGTCCACACATAGTCCCCCTTGAAAGCATAGGTCTTCCCACGGGGCCCTCCGGTTATGCCCGTACCTaGGGGAGTGGTATTCCCACC +
Preference number: 2 (lower is better)
Translates to: YSPHIVPLESIGLPTGPSGYART*GSGIPT
Trigger: GGTGGGAATACCACTCCCTCAGGTACGGGCATAACC...GGAGGGCCCCGTGGGAAGACCTATGCTTTCAAGGGGGACTATGTGTGGACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR GCA 90 bp TCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCACAGCCTGCTACAGCACCTaGAAGGTTCTACTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: SLLQGSGMGLGSVGTGGTACYST*KVLLSR
Trigger: TCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGC...TGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp GGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACGGGGAAATGAAAGGGTaGGTGGTGGAGCCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: GVGSVRGLRSTVLRLLQHGEMKG*VVEPQG
Trigger: CCCCTGAGGCTCCACCACCCACCCTTTCATTTCCCC...GTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGGGGGAAATGAAAGGGTaGGTGGTGGAGCCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQGEMKG*VVEPQG
Trigger: CCCCTGAGGCTCCACCACCCACCCTTTCATTTCCCC...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTGGGGAAATGAAAGGGTaGGTGGTGGAGCCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGGEMKG*VVEPQG
Trigger: CCCCTGAGGCTCCACCACCCACCCTTTCATTTCCCC...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp GTAGACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCGCAGCAAGGCTACAATaGGAGGGAGGGAGAACATGG +
Preference number: 2 (lower is better)
Translates to: VDSAILPTHSSRGLVWHSAARLQ*EGGRTW
Trigger: CCATGTTCTCCCTCCCTCCCATTGTAGCCTTGCTGC...GGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR CCA 90 bp GTAGACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCATAGCAGCCGAGGGCTaGTTTGGCACTCCCGTAAAC +
Preference number: 2 (lower is better)
Translates to: VDSAILPTHSSRGLVWHSIAAEG*FGTPVN
Trigger: GTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTAT...GGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp CCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGGGGCCATGAGGGCCTaGGAATATCGGGAGTGCCCA +
Preference number: 2 (lower is better)
Translates to: PRCIKEDISLPWAARLQWGAMRA*EYRECP
Trigger: TGGGCACTCCCGATATTCCCAGGCCCTCATGGCCCC...CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR CCA 90 bp GAGAGGCCAATAGAGAGCTGCATCCAGGTTAGGTTCTACCCTATTCAGCTTCTTCGCCTGCCAACAGCCTaGAGGGGAGGGGCCTCACCC +
Preference number: 2 (lower is better)
Translates to: ERPIESCIQVRFYPIQLLRLPTA*RGGASP
Trigger: GGGTGAGGCCCCTCCCCTCCAGGCTGTTGGCAGGCG...AAGAAGCTGAATAGGGTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp ACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCTGCACCGCCCTGGATATGGGATaGGTGGGGAGAGGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: TEPGSPASAVAALFFLCTALDMG*VGRGER
Trigger: CCTCTCCCCTCTCCCCACCCATCCCATATCCAGGGC...GGTGCAGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR CAA 90 bp TTCTTTCTCCAGCGGCCCAGCAACAGGTATTTAAGGGTCTTCTGGTaGAAGGGATCCTCTAGGCCACAACGAGGCTGCCTCATGCGGGCC +
Preference number: 2 (lower is better)
Translates to: FFLQRPSNRYLRVFW*KGSSRPQRGCLMRA
Trigger: GGCCCGCATGAGGCAGCCTCGTTGTGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATACCTGTTGCTGGGCCGCTGGAGAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR TCA 90 bp ATCATCTGGGTGCAGCTTAAAGTGGGGCCGGTAGCCCTCGTAGACTGGGGCCATCGTGGTTTCTGTGGCTaGGAGAGTGGTATCCAAGGT +
Preference number: 2 (lower is better)
Translates to: IIWVQLKVGPVALVDWGHRGFCG*ESGIQG
Trigger: ACCTTGGATACCACTCTCTCAGCCACAGAAACCACG...ATGGCCCCAGTCTACGAGGGCTACCGGCCCCACTTTAAGCTGCACCCAGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGGCCACATCATCTGGGTaGAGCTTAAAGTGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQATSSG*SLKWGR
Trigger: CCGGCCCCACTTTAAGCTGCACCCAGATGATGTGGC...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp CTTGGTAAGTGCCTGCCTAAGCCACCTTTAATTTGGCTCCGAACTCTCCCTCCCGGGGAAATGAAAGGGTaGGTGGTGGAGCCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: LGKCLPKPPLIWLRTLPPGEMKG*VVEPQG
Trigger: CCCCTGAGGCTCCACCACCCACCCTTTCATTTCCCC...GGGAGGGAGAGTTCGGAGCCAAATTAAAGGTGGCTTAGGCAGGCACTTACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR CCA 90 bp CCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTCGCCTGCCAACAGCCTaGAGGGGAGGGGCCTCACCC +
Preference number: 2 (lower is better)
Translates to: PVVGNISGIAFLYSKLLVRLPTA*RGGASP
Trigger: GGGTGAGGCCCCTCCCCTCCAGGCTGTTGGCAGGCG...AACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR CAA 90 bp GTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTaGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGT +
Preference number: 2 (lower is better)
Translates to: VVAGVGSVRGLRSTV*RLLQHLQGSTEQTG
Trigger: ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
3UTR CAA 90 bp GAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTaGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAA +
Preference number: 2 (lower is better)
Translates to: EAPVDFALEEVDSAI*PTHSSRGLVWHSRK
Trigger: TTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGGCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGGAAGTGTTAGAGGCCTaGGATCTACGGTCTTGCGCC +
Preference number: 2 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQEVLEA*DLRSCA
Trigger: GGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTC...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp TCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCACAAGTAGACTTTGCCCTTaGAGAAGTAGACTCGGCCAT +
Preference number: 2 (lower is better)
Translates to: SLLQGSGMGLGSVGTGGTSRLCP*RSRLGH
Trigger: ATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACT...TGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAACTCGAAGCTGCTGGTTaGGGCGCCAGTAGACTTTGC +
Preference number: 2 (lower is better)
Translates to: PRHLPPPLTSREEMTQLELEAAG*GASRLC
Trigger: GCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAG...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp AGACAGCAGCATCCAGGTTTCCGGGGAGCCCCTCCCAAAGGGCAGACACTCGGATCTCCCTTAAAGAAGTaGATCCATTGTGTTCGAGGC +
Preference number: 2 (lower is better)
Translates to: RQQHPGFRGAPPKGQTLGSPLKK*IHCVRG
Trigger: GCCTCGAACACAATGGATTCACTTCTTTAAGGGAGA...TCCGAGTGTCTGCCCTTTGGGAGGGGCTCCCCGGAAACCTGGATGCTGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR GCA 90 bp GAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTTCGTCTTCGTCGAAGTaGACACTGCCCAGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: EAPVDFALEEVDSAILPTSSSSK*TLPSSG
Trigger: CCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGA...AGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGGCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR CCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCAGTTGGGTTTCTGTTTaGCCTTTCCCCCTGGGCCCC +
Preference number: 2 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPSWVSV*PFPLGP
Trigger: GGGGCCCAGGGGGAAAGGCCAAACAGAAACCCAACT...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CCA 90 bp TGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCGTAGCCCTCGTAGACTaGGGCCATGAGGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: WVSSQYSNVVSVAERVVSVALVD*GHEGLG
Trigger: TCCCAGGCCCTCATGGCCCCAGTCTACGAGGGCTAC...GGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGCGTGGTTTCTGTGGCTaGGAGAGTGGTATCCAAGGT +
Preference number: 2 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGRGFCG*ESGIQG
Trigger: ACCTTGGATACCACTCTCTCAGCCACAGAAACCACG...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAACTACGGTCTTGCGCCTaGTACAGCACCTGCAAGGTT +
Preference number: 2 (lower is better)
Translates to: PRHLPPPLTSREEMTQLELRSCA*YSTCKV
Trigger: AACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp ACTCTCCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTGGCGGCCATGGCTACGGTCTTGCGCCTaGTACAGCACCTGCAAGGTT +
Preference number: 2 (lower is better)
Translates to: TLPGPSKVLEQYELWRPWLRSCA*YSTCKV
Trigger: AACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG...CCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR GCA 90 bp GAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTCACCTGCCAGAGTCTTaGCTTTTGCCCAAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: EAPVDFALEEVDSAILPTHLPES*LLPKGA
Trigger: GGCTCCTTTGGGCAAAAGGCAAGACTCTGGCAGGTG...AGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGGCGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR GCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTGTCCGGGGACGACAGTaGATCCAGTTGTGGGAAATA +
Preference number: 2 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGVRGRQ*IQLWEI
Trigger: TATTTCCCACAACTGGATGCACTGTCGTCCCCGGAC...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCGACATATCCCTCCCCTaGGCAGCAAGGCTACAATGG +
Preference number: 2 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPDISLP*AARLQW
Trigger: CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTC...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGGCCTTCCCCAAAAGCTaGCTTCTTGCTCCAAGGAGA +
Preference number: 2 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQAFPKS*LLAPRR
Trigger: TCTCCTTGGAGCAAGAAGCCAGCTTTTGGGGAAGGC...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR TCA 90 bp GTAGACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCCTGCAAGGTTCTACTaGGCAGACAGGTATTTCATT +
Preference number: 2 (lower is better)
Translates to: VDSAILPTHSSRGLVWHSPARFY*ADRYFI
Trigger: AATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGG...GGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp TGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCTGGGAATATCGGGAGTaGCCAAGCCCCAGAGCATGG +
Preference number: 2 (lower is better)
Translates to: WVSSQYSNVVSVAERVVSWEYRE*PSPRAW
Trigger: CCATGCTCTGGGGCTTGGGCACTCCCGATATTCCCA...GGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp GGTGATAGCTTTTGGTCTCCTCCGGTCCACCTATTCAGAAACTTCTCATCTCCCGCCACATCATCTGGGTaGAGCTTAAAGTGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: GDSFWSPPVHLFRNFSSPATSSG*SLKWGR
Trigger: CCGGCCCCACTTTAAGCTGCACCCAGATGATGTGGC...GGGAGATGAGAAGTTTCTGAATAGGTGGACCGGAGGAGACCAAAAGCTATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR GCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTTCACTGGACTCTTCTTaGCATAGAGAGCCTGGATCC +
Preference number: 2 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGSLDSS*HREPGS
Trigger: GGATCCAGGCTCTCTATGGCAAGAAGAGTCCAGTGA...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp CTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAAGCCGAGGGCTGGTTTaGCACTCCCGTAAACAAACC +
Preference number: 2 (lower is better)
Translates to: LYSKLLVEAPVDFALEEVSRGLV*HSRKQT
Trigger: GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT...TACTTCTTCAAGGGCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp GGAGCCCTTAAAGAGGAACACCTTTTGGTTGAGAGGCCAATAGAGAGCTGCATCGAGCTTTGGCGGCCATaGAAGGAGAGGCGGATGTCA +
Preference number: 2 (lower is better)
Translates to: GALKEEHLLVERPIESCIELWRP*KERRMS
Trigger: TGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTC...GATGCAGCTCTCTATTGGCCTCTCAACCAAAAGGTGTTCCTCTTTAAGGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR CCA 90 bp ACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCTGCACCCCTCACCCAGCATCATaGCATCCAGTTCACTACTGC +
Preference number: 2 (lower is better)
Translates to: TEPGSPASAVAALFFLCTPHPAS*HPVHYC
Trigger: GCAGTAGTGAACTGGATGCCATGATGCTGGGTGAGG...GGTGCAGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR TCA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATGAAGTGTTAGAGGCCTaGGATCTACGGTCTTGCGCC +
Preference number: 2 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHEVLEA*DLRSCA
Trigger: GGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTC...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGAATGGCATTAAATACTaGACCAGGGAGTCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQNGIKY*TRESSL
Trigger: GAGGCTGGACTCCCTGGTTCAGTATTTAATGCCATT...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR TCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAATGGCATTAAATACTaGACCAGGGAGTCCAGCCTC +
Preference number: 2 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGNGIKY*TRESSL
Trigger: GAGGCTGGACTCCCTGGTTCAGTATTTAATGCCATT...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR TCA 90 bp GGAGCCCTTAAAGAGGAACACCTTTTGGTTGAGAGGCCAATAGAGAGCTGCATCGTTTGGGGTAGCTGCTaGAGTCAGTTCGGGCTAGCT +
Preference number: 2 (lower is better)
Translates to: GALKEEHLLVERPIESCIVWGSC*SQFGLA
Trigger: AGCTAGCCCGAACTGACTTCAGCAGCTACCCCAAAC...GATGCAGCTCTCTATTGGCCTCTCAACCAAAAGGTGTTCCTCTTTAAGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR TCA 90 bp CCAAGATTGTGTCTGTGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTCTCGAAGCTGCTGGTTaGGGCGCCAGTAGACTTTGC +
Preference number: 2 (lower is better)
Translates to: PRLCLWVSSQYSNVVSVALEAAG*GASRLC
Trigger: GCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAG...AGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCACAGACACAATCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAAGGGAGTCCAGCCTCTaGTGTTGCTGCTCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: PRHLPPPLTSREEMTQLERESSL*CCCSFL
Trigger: AAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCT...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR GCA 90 bp CATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGTCCGGGGACGACAGTaGATCCAGTTGTGGGAAATA +
Preference number: 2 (lower is better)
Translates to: HSSRGLVWHSRKQTLDWFVRGRQ*IQLWEI
Trigger: TATTTCCCACAACTGGATGCACTGTCGTCCCCGGAC...AAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp CCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTCATAGCATGCGGAAAGTCAGGTaGTTCTTTCTCCAGCGGCCC +
Preference number: 2 (lower is better)
Translates to: PVDFALEEVDSAILPTHSMRKVR*FFLQRP
Trigger: GGGCCGCTGGAGAAAGAAGCACCTGACTTTCCGCAT...GCTATGAGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR GCA 90 bp GTAGACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCAAAGAGGACTCAGAATaGTTTGTTGCTCAGAGCGTT +
Preference number: 2 (lower is better)
Translates to: VDSAILPTHSSRGLVWHSKEDSE*FVAQSV
Trigger: AACGCTCTGAGCAACAAAGCATTCTGAGTCCTCTTT...GGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR CCA 90 bp ATTAATGCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCAGCCGAGGGCTGGTTTaGCACTCCCGTAAACAAACC +
Preference number: 2 (lower is better)
Translates to: INAWGLTSIAHAEVPCHSSRGLV*HSRKQT
Trigger: GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT...GGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGCATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR CCA 90 bp GGAGCCCTTAAAGAGGAACACCTTTTGGTTGAGAGGCCAATAGAGAGCTGCATCAGCCGAGGGCTGGTTTaGCACTCCCGTAAACAAACC +
Preference number: 2 (lower is better)
Translates to: GALKEEHLLVERPIESCISRGLV*HSRKQT
Trigger: GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT...GATGCAGCTCTCTATTGGCCTCTCAACCAAAAGGTGTTCCTCTTTAAGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR CCA 90 bp GTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGAATAGCAGCCGAGGGCTaGTTTGGCACTCCCGTAAAC +
Preference number: 2 (lower is better)
Translates to: VSIVRGRQCIQLWEIFLGIAAEG*FGTPVN
Trigger: GTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTAT...TCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp GCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGCCAAGATTGTGTCTGTaGGTGAGCAGTCAGTATTCA +
Preference number: 2 (lower is better)
Translates to: AAEGWFGTPVNKPLIGLGPRLCL*VSSQYS
Trigger: TGAATACTGACTGCTCACCCACAGACACAATCTTGG...CCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp AGCTCCAAGATACCCCAACCTCCAGGCCCTTCATTAGGGGGTAGTTGGGTTTCTAAGCCACCTTTAATTTaGCTCCGAACTCTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: SSKIPQPPGPSLGGSWVSKPPLI*LRTLPP
Trigger: GGGAGGGAGAGTTCGGAGCCAAATTAAAGGTGGCTT...AGAAACCCAACTACCCCCTAATGAAGGGCCTGGAGGTTGGGGTATCTTGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR TCA 90 bp GAGAGGCCAATAGAGAGCTGCATCCAGGTTAGGTTCTACCCTATTCAGCTTCTTGAAGTGTTAGAGGCCTaGGATCTACGGTCTTGCGCC +
Preference number: 2 (lower is better)
Translates to: ERPIESCIQVRFYPIQLLEVLEA*DLRSCA
Trigger: GGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTC...AAGAAGCTGAATAGGGTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATCCTCCAGAGAAGAGATaGCACAGTTGGAAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHPPEKR*HSWKGC
Trigger: ACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGG...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp TGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCCTCCATTGCTCATGCTaGAGTCCCATGTCACTCCCA +
Preference number: 2 (lower is better)
Translates to: WVSSQYSNVVSVAERVVSLHCSC*SPMSLP
Trigger: TGGGAGTGACATGGGACTTCAGCATGAGCAATGGAG...GGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp AGCTCCAAGATACCCCAACCTCCAGGCCCTTCATTAGGGGGTAGTTGGGTTTCTATGTACCAGACACTGTaGCAGGCACTTCACATACAG +
Preference number: 2 (lower is better)
Translates to: SSKIPQPPGPSLGGSWVSMYQTL*QALHIQ
Trigger: CTGTATGTGAAGTGCCTGGCACAGTGTCTGGTACAT...AGAAACCCAACTACCCCCTAATGAAGGGCCTGGAGGTTGGGGTATCTTGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR GCA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACCCTGGTCTTCAGGGCTaGATAGGATGCAAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDPGLQG*IGCKCL
Trigger: AAGGCACTTGCATCCTATGCAGCCCTGAAGACCAGG...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CCA 90 bp ACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAGGAAAATAGCAGCCGAGGGCTaGTTTGGCACTCCCGTAAAC +
Preference number: 2 (lower is better)
Translates to: TSREEMTQLEGLSKTDRKIAAEG*FGTPVN
Trigger: GTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTAT...TTTCCTGTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp GGTGATAGCTTTTGGTCTCCTCCGGTCCACCTATTCAGAAACTTCTCATCTCCCCTGTGGCTGAGAGAGTaGTATCCAAGGTTATGCCCG +
Preference number: 2 (lower is better)
Translates to: GDSFWSPPVHLFRNFSSPLWLRE*YPRLCP
Trigger: CGGGCATAACCTTGGATACCACTCTCTCAGCCACAG...GGGAGATGAGAAGTTTCTGAATAGGTGGACCGGAGGAGACCAAAAGCTATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR CAA 90 bp GCATTTTATGTAGGAAGAACAGGACCCAGGCATCTCCCTCCACCATaGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAG +
Preference number: 2 (lower is better)
Translates to: AFYVGRTGPRHLPPP*TSREEMTQLEGLSK
Trigger: CTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGGTCCTGTTCTTCCTACATAAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp AGCTCCAAGATACCCCAACCTCCAGGCCCTTCATTAGGGGGTAGTTGGGTTTCTCCTCTCCCTGCAGGCTaGTTCTTCAAAAATTCATTC +
Preference number: 2 (lower is better)
Translates to: SSKIPQPPGPSLGGSWVSPLPAG*FFKNSF
Trigger: GAATGAATTTTTGAAGAATCAGCCTGCAGGGAGAGG...AGAAACCCAACTACCCCCTAATGAAGGGCCTGGAGGTTGGGGTATCTTGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR GCA 90 bp AGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTTCTACGGTCTTGCGCCTaGTACAGCACCTGCAAGGTT +
Preference number: 2 (lower is better)
Translates to: SSQYSNVVSVAERVVSKVLRSCA*YSTCKV
Trigger: AACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG...AACCTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp GAGAGGCCAATAGAGAGCTGCATCCAGGTTAGGTTCTACCCTATTCAGCTTCTTCCTGGTCTTCAGGGCTaGATAGGATGCAAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: ERPIESCIQVRFYPIQLLPGLQG*IGCKCL
Trigger: AAGGCACTTGCATCCTATGCAGCCCTGAAGACCAGG...AAGAAGCTGAATAGGGTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR GCA 90 bp GTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATCACTGGACTCTTCTTaGCATAGAGAGCCTGGATCC +
Preference number: 2 (lower is better)
Translates to: VSIVRGRQCIQLWEIFLGSLDSS*HREPGS
Trigger: GGATCCAGGCTCTCTATGGCAAGAAGAGTCCAGTGA...TCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCAAGACAGACAGGAAATaGAGTTGGGGGCCAAATCTA +
Preference number: 2 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPKTDRK*SWGPNL
Trigger: TAGATTTGGCCCCCAACTCCATTTCCTGTCTGTCTT...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCTCATTAGGGGGTAGTTaGGTTTCTGTTTGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPSLGGS*VSVWPF
Trigger: GAAAGGCCAAACAGAAACCCAACTACCCCCTAATGA...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CCA 90 bp GAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTGTCAGTATTCAAACGTaGTTTCTGTGGCTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: EAPVDFALEEVDSAILPTVSIQT*FLWLRE
Trigger: CTCTCTCAGCCACAGAAACCACGTTTGAATACTGAC...AGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGGCGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATATTTAAGGGTCTTCTaGTTGAAGGGATCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVYLRVF*LKGSSR
Trigger: CCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATA...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR TCA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAACACCGCACCTCGTCTTaGAATAGCCTTTTAAATGTT +
Preference number: 2 (lower is better)
Translates to: PRHLPPPLTSREEMTQLEHRTSS*NSLLNV
Trigger: AACATTTAAAAGGCTATTTCAAGACGAGGTGCGGTG...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR TCA 90 bp TATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCAGTAGACTTTGCCCTTaGAGAAGTAGACTCGGCCAT +
Preference number: 2 (lower is better)
Translates to: YSPGTTVHPVVGNISGIASRLCP*RSRLGH
Trigger: ATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACT...GGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp CCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTCATAGCAGTAGACTTTGCCCTTaGAGAAGTAGACTCGGCCAT +
Preference number: 2 (lower is better)
Translates to: PVDFALEEVDSAILPTHSSRLCP*RSRLGH
Trigger: ATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACT...GCTATGAGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp CCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTCATAGCAGTGGTATTCCCACCTaGTGGGGTAGTGTCTATAGT +
Preference number: 2 (lower is better)
Translates to: PVDFALEEVDSAILPTHSSGIPT*WGSVYS
Trigger: ACTATAGACACTACCCCATCAGGTGGGAATACCACT...GCTATGAGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR TCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCTTACCCTTAAAGAAGTaGATCCATTGTGTTCGAGGC +
Preference number: 2 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPLPLKK*IHCVRG
Trigger: GCCTCGAACACAATGGATTCACTTCTTTAAGGGTAA...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR GCA 90 bp CCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGTCCGGGGACGACAGTaGATCCAGTTGTGGGAAATA +
Preference number: 2 (lower is better)
Translates to: PVVGNISGIAFLYSKLLVVRGRQ*IQLWEI
Trigger: TATTTCCCACAACTGGATGCACTGTCGTCCCCGGAC...AACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp TGCTTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCGCAGGGTCTGTTCCTaGTTTCCCAGATGCATAAAG +
Preference number: 2 (lower is better)
Translates to: CFSPWVALISSLTRTLFQRRVCS*FPRCIK
Trigger: CTTTATGCATCTGGGAAACCAGGAACAGACCCTGCG...CTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CCA 90 bp CGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTAAACAAACCCTTGATTaGTTTGGGGTAGCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: RSCACYSTCKVLLSRQVFKQTLD*FGVAAE
Trigger: TTCAGCAGCTACCCCAAACCAATCAAGGGTTTGTTT...AAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp GCACCCTCTCTAACAGGCAATCTGGGTAATATAGTTTTCTCCATCTTGCTGCATGAACAGTACGAGCTTTaGCGGCCATGGAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: APSLTGNLGNIVFSILLHEQYEL*RPWKER
Trigger: CCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTC...ATGCAGCAAGATGGAGAAAACTATATTACCCAGATTGCCTGTTAGAGAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
3UTR-3UTR TCA 90 bp GGAGCCCTTAAAGAGGAACACCTTTTGGTTGAGAGGCCAATAGAGAGCTGCATCCCTGCAAGGTTCTACTaGGCAGACAGGTATTTCATT +
Preference number: 2 (lower is better)
Translates to: GALKEEHLLVERPIESCIPARFY*ADRYFI
Trigger: AATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGG...GATGCAGCTCTCTATTGGCCTCTCAACCAAAAGGTGTTCCTCTTTAAGGGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR TCA 90 bp CCAAGATTGTGTCTGTGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTAGTGGTATTCCCACCTaGTGGGGTAGTGTCTATAGT +
Preference number: 2 (lower is better)
Translates to: PRLCLWVSSQYSNVVSVASGIPT*WGSVYS
Trigger: ACTATAGACACTACCCCATCAGGTGGGAATACCACT...AGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCACAGACACAATCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp TGCTTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGTCCAGCCTCTGCTGTTaGTGCTCTTTTCTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: CFSPWVALISSLTRTLFQSSLCC*CSFLSL
Trigger: CAGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGA...CTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CCA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCATTAGGGGGTAGTTaGGTTTCTGTTTGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHSLGGS*VSVWPF
Trigger: GAAAGGCCAAACAGAAACCCAACTACCCCCTAATGA...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR GCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGTCAGTTTACTGGCCATaGTGTTTTCTTGCATTTTAT +
Preference number: 2 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQSVYWP*CFLAFY
Trigger: ATAAAATGCAAGAAAACAGCATGGCCAGTAAACTGA...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp TTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCCCCAAATGCACAGGAAAGTaGTGGCTGGAGTTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: FLCTPKQRANHLDKSSVPKCTGK*WLELEV
Trigger: CACTTCCAACTCCAGCCACCACTTTCCTGTGCATTT...GGGGACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CCA 90 bp TTTTCTCCATCTTGCTGCATTTCCAGATGTGTTCTAGTGGCCCTTAGAGCGTGGAAGACAGACAGGAAATaGAGTTGGGGGCCAAATCTA +
Preference number: 2 (lower is better)
Translates to: FSPSCCISRCVLVALRAWKTDRK*SWGPNL
Trigger: TAGATTTGGCCCCCAACTCCATTTCCTGTCTGTCTT...CCACGCTCTAAGGGCCACTAGAACACATCTGGAAATGCAGCAAGATGGAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR CCA 90 bp TGCTTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCAAGATTGTGTCTGTaGGTGAGCAGTCAGTATTCA +
Preference number: 2 (lower is better)
Translates to: CFSPWVALISSLTRTLFQPRLCL*VSSQYS
Trigger: TGAATACTGACTGCTCACCCACAGACACAATCTTGG...CTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR CCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCACTCATCCCTTATCACTaGACTCTTCTTGCCATAGAG +
Preference number: 2 (lower is better)
Translates to: FSPWVALISSLTRTLFQPLIPYH*TLLAIE
Trigger: CTCTATGGCAAGAAGAGTCCAGTGATAAGGGATGAG...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR GCA 90 bp CGTAATCATAAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGCAGAGTCTTGCCTTTTaGCCAAAGGAGCCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: RNHKHINVILKDSKALAQQSLAF*PKEPGL
Trigger: AAGACCAGGCTCCTTTGGGCAAAAGGCAAGACTCTG...CTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTTATGATTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CCA 90 bp GAGAGGCCAATAGAGAGCTGCATCCAGGTTAGGTTCTACCCTATTCAGCTTCTTAAACAAACCCTTGATTaGTTTGGGGTAGCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: ERPIESCIQVRFYPIQLLKQTLD*FGVAAE
Trigger: TTCAGCAGCTACCCCAAACCAATCAAGGGTTTGTTT...AAGAAGCTGAATAGGGTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp GTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATGTGGGAAATATTTCTaGGATAGCCTTTCTCTACTC +
Preference number: 2 (lower is better)
Translates to: VSIVRGRQCIQLWEIFLGCGKYF*DSLSLL
Trigger: GAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACA...TCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR GCA 90 bp TCCTCTCTTATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACGAGAGCCTGGATCCCTaGCACATCATCTGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: SSLMNMELAFIKHKCTRHESLDP*HIIWVQ
Trigger: CTGCACCCAGATGATGTGGCAGGGATCCAGGCTCTC...GTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCATAAGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR GCA 90 bp TCCTCTCTTATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGCAAGTGCCTTCTCTaGTTCTCACCGTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: SSLMNMELAFIKHKCTRHCKCLL*FSPWVA
Trigger: TGCCACCCACGGTGAGAAGCAGAGAAGGCACTTGCA...GTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCATAAGAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR GCA 90 bp CGTAATCATAAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTCCTGGTTTCCCAGATaGATAAAGGAAGACATATCC +
Preference number: 2 (lower is better)
Translates to: RNHKHINVILKDSKALAQSWFPR*IKEDIS
Trigger: GGATATGTCTTCCTTTATGCATCTGGGAAACCAGGA...CTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTTATGATTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR GCA 90 bp ATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGTGCCAGGAGGCCAATAGAGAGCTaGATCCAGGTTAGGTTCTAC +
Preference number: 2 (lower is better)
Translates to: MNMELAFIKHKCTRHCARRPIES*IQVRFY
Trigger: GTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCT...CCTGGCACAGTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CCA 90 bp AAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTTTACTGGCTGTGGGAAATATTTCTaGGATAGCCTTTCTCTACTC +
Preference number: 2 (lower is better)
Translates to: KHINVILKDSKALAQFTGCGKYF*DSLSLL
Trigger: GAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACA...GCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR GCA 72 bp GTGCCCAAGCCCCAGAGCATGGCCCACTTCATGGGCTaGAATGATGCGCAGGTTCACCCCACGGTAGGTCCC +
Preference number: 3 (lower is better)
Translates to: VPKPQSMAHFMG*NDAQVHPTVGP
Trigger: GGGACCTACCGTGGGGTGAACCTGCGCATCATTGCAGCCCATGAAGTGGGCCATGCTCTGGGGCTTGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR CCA 72 bp GAACTCGTCTTCGTCGAAGTGCACACTGCCCAGCTCTaGGATGTCGGCATGGGCCAGGACTCTCCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: ELVFVEVHTAQL*DVGMGQDSPRP
Trigger: GGGCCTGGGAGAGTCCTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGAGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CCA 72 bp GTGCAGCTTAAAGTGGGGCCGGTAGCCCTCGTAGACTaGGGCCATGAGGGCCTGGGAATATCGGGAGTGCCC +
Preference number: 3 (lower is better)
Translates to: VQLKVGPVALVD*GHEGLGISGVP
Trigger: GGGCACTCCCGATATTCCCAGGCCCTCATGGCCCCAGTCTACGAGGGCTACCGGCCCCACTTTAAGCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR CCA 72 bp GTCCCACTGCCAGTACCCGGAGCCCTGGATATGGGATaGGTGGGGAGAGGGGAGAGGAAGAGGAGAGAGCTT +
Preference number: 3 (lower is better)
Translates to: VPLPVPGALDMG*VGRGERKRREL
Trigger: AAGCTCTCTCCTCTTCCTCTCCCCTCTCCCCACCCATCCCATATCCAGGGCTCCGGGTACTGGCAGTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR GCA 72 bp CCATGGAAGGAGAGGCGGATGTCAGCCGCACCAGCCTaGACCTCTTGGAAGGTCAAGGGAGCCACATTGCTC +
Preference number: 3 (lower is better)
Translates to: PWKERRMSAAPA*TSWKVKGATLL
Trigger: GAGCAATGTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGGTGCGGCTGACATCCGCCTCTCCTTCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR GCA 72 bp CCTCAGTCCAGAACTCGTCTTCGTCGAAGTGCACACTaGCCAGCTCTGGGATGTCGGCATGGGCCAGGACTC +
Preference number: 3 (lower is better)
Translates to: PQSRTRLRRSAH*PALGCRHGPGL
Trigger: GAGTCCTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGAGTTCTGGACTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CCA 72 bp GCCTGGGAATATCGGGAGTGCCCAAGCCCCAGAGCATaGCCCACTTCATGGGCTGCAATGATGCGCAGGTTC +
Preference number: 3 (lower is better)
Translates to: AWEYRECPSPRA*PTSWAAMMRRF
Trigger: GAACCTGCGCATCATTGCAGCCCATGAAGTGGGCCATGCTCTGGGGCTTGGGCACTCCCGATATTCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR CCA 72 bp CTTGCCATAGAGAGCCTGGATCCCTGCCACATCATCTaGGTGCAGCTTAAAGTGGGGCCGGTAGCCCTCGTA +
Preference number: 3 (lower is better)
Translates to: LAIESLDPCHII*VQLKVGPVALV
Trigger: TACGAGGGCTACCGGCCCCACTTTAAGCTGCACCCAGATGATGTGGCAGGGATCCAGGCTCTCTATGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CAA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGGTCAAGGGAGCCACATaGCTCCAGTCCTGGAAGGCT +
Preference number: 3 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQVKGAT*LQSWKA
Trigger: AGCCTTCCAGGACTGGAGCAATGTGGCTCCCTTGAC...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR TCA 72 bp GGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTaGGATCTACGGTCTTGCGCCTGCTACAGCACCTGC +
Preference number: 3 (lower is better)
Translates to: GKWWLELEVLEA*DLRSCACYSTC
Trigger: GCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
3UTR TCA 72 bp CATAGGTCTTCCCACGGGGCCCTCCATTGCTCATGCTaGAGTCCCATGTCACTCCCATTTGTCCAGGCCTCA +
Preference number: 3 (lower is better)
Translates to: HRSSHGALHCSC*SPMSLPFVQAS
Trigger: TGAGGCCTGGACAAATGGGAGTGACATGGGACTTCAGCATGAGCAATGGAGGGCCCCGTGGGAAGACCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CCA 72 bp CTCCAGCGGCCCAGCAACAGGTATTTAAGGGTCTTCTaGTTGAAGGGATCCTCTAGGCCACAACGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: LQRPSNRYLRVF*LKGSSRPQRGC
Trigger: GCAGCCTCGTTGTGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATACCTGTTGCTGGGCCGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CCA 72 bp TCAAAAGTATTGGAACAGTACGAGCTTTGGCGGCCATaGAAGGAGAGGCGGATGTCAGCCGCACCAGCCTGC +
Preference number: 3 (lower is better)
Translates to: SKVLEQYELWRP*KERRMSAAPAC
Trigger: GCAGGCTGGTGCGGCTGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CCA 72 bp CCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTaGCGGCCATGGAAGGAGAGGCGGATGTCAGCCGCA +
Preference number: 3 (lower is better)
Translates to: PGPSKVLEQYEL*RPWKERRMSAA
Trigger: TGCGGCTGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR CAA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCCTGAGATCTACGGTCTaGCGCCTGCTACAGCACCTG +
Preference number: 3 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPLRSTV*RLLQHL
Trigger: CAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CAA 90 bp CCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGCTGAGATCTACGGTCTaGCGCCTGCTACAGCACCTG +
Preference number: 3 (lower is better)
Translates to: PRCIKEDISLPWAARLQWLRSTV*RLLQHL
Trigger: CAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG...CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CAA 90 bp GGAGCCCCTCCCAAAGGGCAGACACTCGGAACAAGGGGCCCGGTCCTGAATCTGGGTCTTAACCTAATGTaGCAAATGGGGAATCTGAGA +
Preference number: 3 (lower is better)
Translates to: GAPPKGQTLGTRGPVLNLGLNLM*QMGNLR
Trigger: TCTCAGATTCCCCATTTGCAACATTAGGTTAAGACC...CAGATTCAGGACCGGGCCCCTTGTTCCGAGTGTCTGCCCTTTGGGAGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CAA 90 bp GAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTGGAACAGTACGAGCTTaGGCGGCCATGGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: EAPVDFALEEVDSAILPTGTVRA*AAMEGE
Trigger: CTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCC...AGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGGCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR GCA 72 bp ACTCTCCTGCGCAGGGTCTGTTCCTGGTTTCCCAGATaGATAAAGGAAGACATATCCCTCCCCTGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: TLLRRVCSWFPR*IKEDISLPWAA
Trigger: TGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGCAGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR GCA 72 bp CTTGCCTTTTGCCCAAAGGAGCCTGGTCTTCAGGGCTaGATAGGATGCAAGTGCCTTCTCTGCTTCTCACCG +
Preference number: 3 (lower is better)
Translates to: LAFCPKEPGLQG*IGCKCLLCFSP
Trigger: CGGTGAGAAGCAGAGAAGGCACTTGCATCCTATGCAGCCCTGAAGACCAGGCTCCTTTGGGCAAAAGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR CCA 72 bp CTATTCCTCCTTAGGAACCTCACCCTCCCCTCCAAGTaGCTTCCTAGTTGTCCTTCCAACCAGGTGCACCCT +
Preference number: 3 (lower is better)
Translates to: LFLLRNLTLPSK*LPSCPSNQVHP
Trigger: AGGGTGCACCTGGTTGGAAGGACAACTAGGAAGCCACTTGGAGGGGAGGGTGAGGTTCCTAAGGAGGAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR TCA 72 bp GTCCTGAATCTGATACAGTCCACACATAGTCCCCCTTaGAAGCATAGGTCTTCCCACGGGGCCCTCCATTGC +
Preference number: 3 (lower is better)
Translates to: VLNLIQSTHSPP*KHRSSHGALHC
Trigger: GCAATGGAGGGCCCCGTGGGAAGACCTATGCTTTCAAGGGGGACTATGTGTGGACTGTATCAGATTCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR TCA 72 bp GTCCTGAATCTGATACAGTCCACACATAGTCCCCCTTaGAAGCATAGGTCTTCCCACGGGGCCCTGAGCGTA +
Preference number: 3 (lower is better)
Translates to: VLNLIQSTHSPP*KHRSSHGALSV
Trigger: TACGCTCAGGGCCCCGTGGGAAGACCTATGCTTTCAAGGGGGACTATGTGTGGACTGTATCAGATTCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR CCA 72 bp GCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTaGCACTCCCGTAAACAAACCCTTGATTGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: AILPTHSSRGLV*HSRKQTLDWFG
Trigger: CCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR CCA 72 bp ACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTaGTTTGGCACTCCCGTAAACAAACCCTTGATTGGT +
Preference number: 3 (lower is better)
Translates to: TRPSCQLIAAEG*FGTPVNKPLIG
Trigger: ACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CAA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACCTGAGATCTACGGTCTaGCGCCTGCTACAGCACCTG +
Preference number: 3 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDLRSTV*RLLQHL
Trigger: CAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CAA 90 bp ACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCTGCACCAGGATTCCAAGGCCCTaGCTCAGTTTACTGGCCATG +
Preference number: 3 (lower is better)
Translates to: TEPGSPASAVAALFFLCTRIPRP*LSLLAM
Trigger: CATGGCCAGTAAACTGAGCAAGGGCCTTGGAATCCT...GGTGCAGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR GCA 72 bp TGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTTATaGCCGTACCTGAGGGAGTGGTATTCCCACCTGATG +
Preference number: 3 (lower is better)
Translates to: WFLWLREWYPRL*PYLREWYSHLM
Trigger: CATCAGGTGGGAATACCACTCCCTCAGGTACGGGCATAACCTTGGATACCACTCTCTCAGCCACAGAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR CCA 72 bp TTTCCCAGATGCATAAAGGAAGACATATCCCTCCCCTaGGCAGCAAGGCTACAATGGGAGGGAGGGAGAACA +
Preference number: 3 (lower is better)
Translates to: FPRCIKEDISLP*AARLQWEGGRT
Trigger: TGTTCTCCCTCCCTCCCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR CCA 72 bp AGCCTTGGTAAGTGCCTGCCTAAGCCACCTTTAATTTaGCTCCGAACTCTCCCTCCCCATGTCACATGTCTC +
Preference number: 3 (lower is better)
Translates to: SLGKCLPKPPLI*LRTLPPHVTCL
Trigger: GAGACATGTGACATGGGGAGGGAGAGTTCGGAGCCAAATTAAAGGTGGCTTAGGCAGGCACTTACCAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
3UTR-3UTR CAA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCTCCTTAACCAGAACTTaGTTCCAGCCACTGACCCAT +
Preference number: 3 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPSLTRT*FQPLTH
Trigger: ATGGGTCAGTGGCTGGAACAAAGTTCTGGTTAAGGA...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CAA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCACCAGAGTCTTGCCTTTaGCCCAAAGGAGCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: FSPWVALISSLTRTLFQPPESCL*PKGAWS
Trigger: AGACCAGGCTCCTTTGGGCAAAAGGCAAGACTCTGG...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR CCA 72 bp TCACTGGACTCTTCTTGCCAGGCCCATCAAAAGTATTaGAACAGTACGAGCTTTGGCGGCCATGGAAGGAGA +
Preference number: 3 (lower is better)
Translates to: SLDSSCQAHQKY*NSTSFGGHGRR
Trigger: TCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGCAAGAAGAGTCCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
3UTR-3UTR CAA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTGGTCTTAACCTAATGTaGCAAATGGGGAATCTGAGA +
Preference number: 3 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGGLNLM*QMGNLR
Trigger: TCTCAGATTCCCCATTTGCAACATTAGGTTAAGACC...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CAA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATGTCCAGCCTCTGCTGTaGCTGCTCTTTTCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHVQPLL*LLFSFS
Trigger: AGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGAC...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CAA 90 bp AGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTTGTAGACTCGGCCATCTaGCCAACTCATAGCAGCCGA +
Preference number: 3 (lower is better)
Translates to: SSQYSNVVSVAERVVSKVVDSAI*PTHSSR
Trigger: TCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC...AACCTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR-3UTR CAA 90 bp CTTACCCTTAAAGAAGTGAATCCATTGTGTTCGAGGCGAGTAGACAGCAGCATCCCATGTCACTCCCATTaGTCCAGGCCTCAGGATCAG +
Preference number: 3 (lower is better)
Translates to: LTLKEVNPLCSRRVDSSIPCHSH*SRPQDQ
Trigger: CTGATCCTGAGGCCTGGACAAATGGGAGTGACATGG...GATGCTGCTGTCTACTCGCCTCGAACACAATGGATTCACTTCTTTAAGGGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR TCA 72 bp GCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTaGGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: ASGVNVQDCVCG*AVSIQTWFLWL
Trigger: CAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
3UTR CCA 72 bp CCATGTCACATGTCTCCTTCCATGGTCATTAATGCCTaGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCA +
Preference number: 3 (lower is better)
Translates to: PCHMSPSMVINA*GLTSIAHAEVP
Trigger: TGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGCATTAATGACCATGGAAGGAGACATGTGACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
3UTR-3UTR CAA 90 bp CTTACCCTTAAAGAAGTGAATCCATTGTGTTCGAGGCGAGTAGACAGCAGCATCCATCTCCCTCCACCATaGACCTCCAGAGAAGAGATG +
Preference number: 3 (lower is better)
Translates to: LTLKEVNPLCSRRVDSSIHLPPP*TSREEM
Trigger: CATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATG...GATGCTGCTGTCTACTCGCCTCGAACACAATGGATTCACTTCTTTAAGGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR CAA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAAATGTTCACCTCAGCTaGCCTCACAGTGGTAAAAAT +
Preference number: 3 (lower is better)
Translates to: PRHLPPPLTSREEMTQLENVHLS*PHSGKN
Trigger: ATTTTTACCACTGTGAGGCAAGCTGAGGTGAACATT...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR-3UTR CAA 90 bp TTCTTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCGTAGACTCGGCCATCTaGCCAACTCATAGCAGCCGA +
Preference number: 3 (lower is better)
Translates to: FFLCTPKQRANHLDKSSVVDSAI*PTHSSR
Trigger: TCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC...GACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR CAA 90 bp CCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTTTAAGGGTCTTCTGGTaGAAGGGATCCTCTAGGCCA +
Preference number: 3 (lower is better)
Translates to: PVVGNISGIAFLYSKLLVLRVFW*KGSSRP
Trigger: TGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAA...AACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR-3UTR CAA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATAAAGAAGTGAATCCATaGTGTTCGAGGCGAGTAGAC +
Preference number: 3 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHKEVNP*CSRRVD
Trigger: GTCTACTCGCCTCGAACACAATGGATTCACTTCTTT...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR GCA 72 bp GAGGAACACCTTTTGGTTGAGAGGCCAATAGAGAGCTaGATCCAGGTTAGGTTCTACCCTATTCAGCTTCTT +
Preference number: 3 (lower is better)
Translates to: EEHLLVERPIES*IQVRFYPIQLL
Trigger: AAGAAGCTGAATAGGGTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCTCTCAACCAAAAGGTGTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
3UTR CCA 72 bp AAGAACAAGTCACCTCTGTCCTCAGGTGATAGCTTTTaGTCTCCTCCGGTCCACCTATTCAGAAACTTCTCA +
Preference number: 3 (lower is better)
Translates to: KNKSPLSSGDSF*SPPVHLFRNFS
Trigger: TGAGAAGTTTCTGAATAGGTGGACCGGAGGAGACCAAAAGCTATCACCTGAGGACAGAGGTGACTTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR TCA 72 bp CATCTTGAAATTAATGTAGCGCCACACCTTGTCTCCTaGGAGCATGTGAGGAAAGAACAAGTCACCTCTGTC +
Preference number: 3 (lower is better)
Translates to: HLEINVAPHLVS*EHVRKEQVTSV
Trigger: GACAGAGGTGACTTGTTCTTTCCTCACATGCTCTCAGGAGACAAGGTGTGGCGCTACATTAATTTCAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR CCA 72 bp ACTCAGAATGCTTTGTTGCTCAGAGCGTTTCAGCTTTaGTCCACTCAACAAAACAAAAGCCCTGCAGATAGC +
Preference number: 3 (lower is better)
Translates to: TQNALLLRAFQL*STQQNKSPADS
Trigger: GCTATCTGCAGGGCTTTTGTTTTGTTGAGTGGACCAAAGCTGAAACGCTCTGAGCAACAAAGCATTCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR-3UTR CAA 90 bp CGTAATCATAAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGGGCCCATCAAAAGTATaGGAACAGTACGAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: RNHKHINVILKDSKALAQGPSKV*EQYELW
Trigger: CCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCC...CTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTTATGATTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR TCA 72 bp AGCCCACTCCTCCTAAGAAGGGATTTGCCCTTGCTTTaGACTTTATACCTTAAAGAGGAACACCTTTTGGTT +
Preference number: 3 (lower is better)
Translates to: SPLLLRRDLPLL*TLYLKEEHLLV
Trigger: AACCAAAAGGTGTTCCTCTTTAAGGTATAAAGTTCAAAGCAAGGGCAAATCCCTTCTTAGGAGGAGTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR GCA 72 bp GCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTaGTCAGTTTACTGGCCATGCTGTTTTCTTGCATTT +
Preference number: 3 (lower is better)
Translates to: AHKCDSQGFQGP*SVYWPCCFLAF
Trigger: AAATGCAAGAAAACAGCATGGCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTGGCTTGACGCAGGGCTaGCCGGGCTGTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: DSAILPTHSSRGLVWHSRGLTQG*PGCVGW
Trigger: CCACCCCACACAGCCCGGGCAGCCCTGCGTCAAGCC...ACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
3UTR CAA 72 bp GGTCAAGGGAGCCACATTGCTCCAGTCCTGGAAGGCTaGACGCAGGGCTGCCCGGGCTGTGTGGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GQGSHIAPVLEG*TQGCPGCVGWK
Trigger: CTTCCACCCCACACAGCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTGGAGCAATGTGGCTCCCTTGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR TCA 90 bp GTAGACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCAGTCCTGGAAGGCTTaGCGCAGGGCTGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: VDSAILPTHSSRGLVWHSQSWKA*RRAARA
Trigger: AGCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTG...GGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CCA 90 bp AGACAGCAGCATCCAGGTTTCCGGGGAGCCCCTCCCAAAGGGCAGACACTCGGAGGGGCCATGAGGGCCTaGGAATATCGGGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RQQHPGFRGAPPKGQTLGGAMRA*EYRECP
Trigger: TGGGCACTCCCGATATTCCCAGGCCCTCATGGCCCC...TCCGAGTGTCTGCCCTTTGGGAGGGGCTCCCCGGAAACCTGGATGCTGCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGCACAGGCGCCACCTCTaGAAGCCCCAGGACCCGGCC +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGHRRHL*KPQDPA
Trigger: GGCCGGGTCCTGGGGCTTGCAGAGGTGGCGCCTGTG...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTCGCCTGCCAACAGCCTaGAGGGGAGGGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGRLPTA*RGGASP
Trigger: GGGTGAGGCCCCTCCCCTCCAGGCTGTTGGCAGGCG...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGCAGTCCTGGAAGGCTTaGCGCAGGGCTGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQQSWKA*RRAARA
Trigger: AGCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTG...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR GCA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTACACAGGCGCCACCTCTaGAAGCCCCAGGACCCGGCC +
Preference number: 4 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVHRRHL*KPQDPA
Trigger: GGCCGGGTCCTGGGGCTTGCAGAGGTGGCGCCTGTG...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCGGCTTGACGCAGGGCTaGCCGGGCTGTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLFLVSQMHKGRHIPPLGGLTQG*PGCVGW
Trigger: CCACCCCACACAGCCCGGGCAGCCCTGCGTCAAGCC...GCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR CCA 90 bp CAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCCCAGCCACAGCTGCTaGCAGTTCATGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: QFTTARVWHGTGFCGHWGPSHSC*QFMVPP
Trigger: TGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGG...CCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS-3UTR CCA 90 bp ATCATCTGGGTGCAGCTTAAAGTGGGGCCGGTAGCCCTCGTAGACTGGGGCCATGTAGCCCTCGTAGACTaGGGCCATGAGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: IIWVQLKVGPVALVDWGHVALVD*GHEGLG
Trigger: TCCCAGGCCCTCATGGCCCCAGTCTACGAGGGCTAC...ATGGCCCCAGTCTACGAGGGCTACCGGCCCCACTTTAAGCTGCACCCAGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCACATCTGGGATGTCGGCATaGGCCAGGACTCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLLQGSGMGLGSVGTGGTSGMSA*ARTLPQ
Trigger: CTGAGGGAGAGTCCTGGCCCATGCCGACATCCCAGA...TGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR TCA 90 bp TGGATATGGGATGGGTGGGGAGAGGGGAGAGGAAGAGGAGAGAGCTTAGGACCCGGCTGTCCGTGCCTCTaGCCTGAGATTTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: WIWDGWGEGRGRGESLGPGCPCL*PEISGS
Trigger: GCTCCCAGAAATCTCAGGTCAGAGGCACGGACAGCC...GGGTCCTAAGCTCTCTCCTCTTCCTCTCCCCTCTCCCCACCCATCCCATATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR TCA 90 bp TCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCACACTTCATGGGCTGCAATaGTGCGCAGGTTCACCCCAC +
Preference number: 4 (lower is better)
Translates to: SLLQGSGMGLGSVGTGGTLHGLQ*CAGSPH
Trigger: GTGGGGTGAACCTGCGCATCATTGCAGCCCATGAAG...TGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGGGTTATGCCCGTACCTaGGGGAGTGGTATTCCCACC +
Preference number: 4 (lower is better)
Translates to: QFTTARVWHGTGFCGHWGGYART*GSGIPT
Trigger: GGTGGGAATACCACTCCCTCAGGTACGGGCATAACC...CCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCACAGGTTATGCCCGTACCTaGGGGAGTGGTATTCCCACC +
Preference number: 4 (lower is better)
Translates to: SLLQGSGMGLGSVGTGGTGYART*GSGIPT
Trigger: GGTGGGAATACCACTCCCTCAGGTACGGGCATAACC...TGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GGACTCTTCTTGCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTGGCGGCACAGGCGCCACCTCTaGAAGCCCCAGGACCCGGCC +
Preference number: 4 (lower is better)
Translates to: GLFLPGPSKVLEQYELWRHRRHL*KPQDPA
Trigger: GGCCGGGTCCTGGGGCTTGCAGAGGTGGCGCCTGTG...CCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGCAAGAAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR GCA 90 bp CTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGGCTTGACGCAGGGCTaGCCGGGCTGTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LYSKLLVEAPVDFALEEVGLTQG*PGCVGW
Trigger: CCACCCCACACAGCCCGGGCAGCCCTGCGTCAAGCC...TACTTCTTCAAGGGCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR GCA 90 bp GGACTCTTCTTGCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTGGCGGGGCTTGACGCAGGGCTaGCCGGGCTGTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLFLPGPSKVLEQYELWRGLTQG*PGCVGW
Trigger: CCACCCCACACAGCCCGGGCAGCCCTGCGTCAAGCC...CCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGCAAGAAGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR GCA 90 bp GACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTTGGGAATATCGGGAGTaGCCAAGCCCCAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: DSAILPTHSSRGLVWHSRWEYRE*PSPRAW
Trigger: CCATGCTCTGGGGCTTGGGCACTCCCGATATTCCCA...ACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGGGCTTGACGCAGGGCTaGCCGGGCCAGCAACAGGTA +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGGLTQG*PGQQQV
Trigger: TACCTGTTGCTGGCCCGGGCAGCCCTGCGTCAAGCC...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548629.5
CDS-3UTR CCA 90 bp GACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTTCATGCGGGCCCTTGTaGCATCATCCAGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: DSAILPTHSSRGLVWHSRSCGPL*HHPADL
Trigger: CAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGA...ACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CCA 90 bp GACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTCCAGCCTGCACCTCTTaGAAGGTCAAGGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: DSAILPTHSSRGLVWHSRPACTS*KVKGAT
Trigger: TGTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGG...ACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CCA 90 bp CATGGCATCCAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACACTGCCCAGCTCTaGGATGTCGGCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HGIQFTTARVWHGTGFCGHTAQL*DVGMGQ
Trigger: CTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTG...CCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGGGGGCCATGAGGGCCTaGGAATATCGGGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGEGAMRA*EYRECP
Trigger: TGGGCACTCCCGATATTCCCAGGCCCTCATGGCCCC...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTCGCCTGCCAACAGCCTaGAGGGGAGGGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: SGIAFLYSKLLVEAPVDFRLPTA*RGGASP
Trigger: GGGTGAGGCCCCTCCCCTCCAGGCTGTTGGCAGGCG...AAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GACTCTTCTTGCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTGGCGGCCAGTCCTGGAAGGCTTaGCGCAGGGCTGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: DSSCQAHQKYWNSTSFGGQSWKA*RRAARA
Trigger: AGCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTG...GCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGCAAGAAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR TCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCGTAGACTGGGGCCATaGGGGCCTGGGAATATCGGG +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQRRLGP*GPGNIG
Trigger: CCCGATATTCCCAGGCCCTCATGGCCCCAGTCTACG...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCCACAGGCGCCACCTCTaGAAGCCCCAGGACCCGGCC +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFHRRHL*KPQDPA
Trigger: GGCCGGGTCCTGGGGCTTGCAGAGGTGGCGCCTGTG...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAAGGCCACAACGAGGCTaGCTCATGCGGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVRPQRG*LMRALV
Trigger: CACAAGGGCCCGCATGAGGCAGCCTCGTTGTGGCCT...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR GCA 90 bp CAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGATGCGGAAAGTCAGGTaGTTCTTTCTCCAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: QFTTARVWHGTGFCGHWGMRKVR*FFLQRP
Trigger: GGGCCGCTGGAGAAAGAAGCACCTGACTTTCCGCAT...CCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR GCA 90 bp CAGGTTCACCCCACGGTAGGTCCCCTCAGTCCAGAACTCGTCTTCGTCGAAGTGTCAGCCGCACCAGCCTaGACCTCTTGGAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: QVHPTVGPLSPELVFVEVSAAPA*TSWKVK
Trigger: CTTGACCTTCCAAGAGGTGCAGGCTGGTGCGGCTGA...CACTTCGACGAAGACGAGTTCTGGACTGAGGGGACCTACCGTGGGGTGAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR GCA 90 bp ATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGAGGGAGGGTCAGGATCAGCAGGCTaGCCCCACCGCCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: IKEDISLPWAARLQWEGGSGSAG*PHRLPT
Trigger: TGTTGGCAGGCGGTGGGGGCAGCCTGCTGATCCTGA...CCCTCCCTCCCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR GCA 90 bp CCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGCTAGCTCGTCCCACTaGCAGTACCCGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PRCIKEDISLPWAARLQWASSSH*QYPEPW
Trigger: CCAGGGCTCCGGGTACTGGCAGTGGGACGAGCTAGC...CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp CAGGTTCACCCCACGGTAGGTCCCCTCAGTCCAGAACTCGTCTTCGTCGAAGTGCCGTACCTGAGGGAGTaGTATTCCCACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: QVHPTVGPLSPELVFVEVPYLRE*YSHLMG
Trigger: CCCCATCAGGTGGGAATACCACTCCCTCAGGTACGG...CACTTCGACGAAGACGAGTTCTGGACTGAGGGGACCTACCGTGGGGTGAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR CCA 90 bp TGTCTCTTCTTCTTCCTCATCCCTTATCACTGGACTCTTCTTGCCAGGCCCATCCGCCTGCCAACAGCCTaGAGGGGAGGGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: CLFFFLIPYHWTLLARPIRLPTA*RGGASP
Trigger: GGGTGAGGCCCCTCCCCTCCAGGCTGTTGGCAGGCG...GATGGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAGGAAGAAGAAGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR TCA 90 bp GGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACGGCTGTCCGTGCCTCTaGCCTGAGATTTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GVGSVRGLRSTVLRLLQHGCPCL*PEISGS
Trigger: GCTCCCAGAAATCTCAGGTCAGAGGCACGGACAGCC...GTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GCATCATGGCATCCAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGGGCTGTCCGTGCCTCTaGCCTGAGATTTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ASWHPVHYCKGLAWDWVLGCPCL*PEISGS
Trigger: GCTCCCAGAAATCTCAGGTCAGAGGCACGGACAGCC...CAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATGCCATGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS-3UTR TCA 90 bp GGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCCGTAGACTGGGGCCATaGGGGCCTGGGAATATCGGG +
Preference number: 4 (lower is better)
Translates to: GLFLVSQMHKGRHIPPLGRRLGP*GPGNIG
Trigger: CCCGATATTCCCAGGCCCTCATGGCCCCAGTCTACG...GCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp CAGGTTCACCCCACGGTAGGTCCCCTCAGTCCAGAACTCGTCTTCGTCGAAGTGGTTTGGGGTAGCTGCTaGAGTCAGTTCGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: QVHPTVGPLSPELVFVEVVWGSC*SQFGLA
Trigger: AGCTAGCCCGAACTGACTTCAGCAGCTACCCCAAAC...CACTTCGACGAAGACGAGTTCTGGACTGAGGGGACCTACCGTGGGGTGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR TCA 90 bp GGAGCCCCTCCCAAAGGGCAGACACTCGGAACAAGGGGCCCGGTCCTGAATCTGAGTGGTATTCCCACCTaGTGGGGTAGTGTCTATAGT +
Preference number: 4 (lower is better)
Translates to: GAPPKGQTLGTRGPVLNLSGIPT*WGSVYS
Trigger: ACTATAGACACTACCCCATCAGGTGGGAATACCACT...CAGATTCAGGACCGGGCCCCTTGTTCCGAGTGTCTGCCCTTTGGGAGGGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CAGGTTCACCCCACGGTAGGTCCCCTCAGTCCAGAACTCGTCTTCGTCGAAGTGGAAGTGTTAGAGGCCTaGGATCTACGGTCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: QVHPTVGPLSPELVFVEVEVLEA*DLRSCA
Trigger: GGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTC...CACTTCGACGAAGACGAGTTCTGGACTGAGGGGACCTACCGTGGGGTGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR GCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCACACAGGCGCCACCTCTaGAAGCCCCAGGACCCGGCC +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPHRRHL*KPQDPA
Trigger: GGCCGGGTCCTGGGGCTTGCAGAGGTGGCGCCTGTG...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp ACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCTGCACCAGGCCACAACGAGGCTaGCTCATGCGGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: TEPGSPASAVAALFFLCTRPQRG*LMRALV
Trigger: CACAAGGGCCCGCATGAGGCAGCCTCGTTGTGGCCT...GGTGCAGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR GCA 90 bp GAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTAGGCCACAACGAGGCTaGCTCATGCGGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: EAPVDFALEEVDSAILPTRPQRG*LMRALV
Trigger: CACAAGGGCCCGCATGAGGCAGCCTCGTTGTGGCCT...AGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGGCGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR GCA 90 bp GTAGACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCATGCGGAAAGTCAGGTaGTTCTTTCTCCAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: VDSAILPTHSSRGLVWHSMRKVR*FFLQRP
Trigger: GGGCCGCTGGAGAAAGAAGCACCTGACTTTCCGCAT...GGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR GCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTCGTCGAAGTGCACACTaGCCAGCTCTGGGATGTCGG +
Preference number: 4 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGRRSAH*PALGCR
Trigger: CCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACG...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCGTCGAAGTGCACACTaGCCAGCTCTGGGATGTCGG +
Preference number: 4 (lower is better)
Translates to: GVGSVRGLRSTVLRLLQHRRSAH*PALGCR
Trigger: CCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACG...GTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TTCCCACCTGATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGCGTCGAAGTGCACACTaGCCAGCTCTGGGATGTCGG +
Preference number: 4 (lower is better)
Translates to: FPPDGVVSIVRGRQCIQLRRSAH*PALGCR
Trigger: CCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACG...CAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATCAGGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGTCGTCTTCGTCGAAGTaGACACTGCCCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGESSSSK*TLPSSG
Trigger: CCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGA...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGGAGAGCCTGGATCCCTaGCACATCATCTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGEESLDP*HIIWVQ
Trigger: CTGCACCCAGATGATGTGGCAGGGATCCAGGCTCTC...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp CAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCATCCAGTTCACTACTaGAAGGGTCTGGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: QFTTARVWHGTGFCGHWGHPVHY*KGLAWD
Trigger: GTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATG...CCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS-3UTR GCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGGCCTGCCTCAGGACCTaGCTTCCCCAAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQACLRT*LPQKLA
Trigger: AGCCAGCTTTTGGGGAAGGCAGGTCCTGAGGCAGGC...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp GAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTTCAGGATCAGCAGGCTaGCCCCACCGCCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: EAPVDFALEEVDSAILPTSGSAG*PHRLPT
Trigger: TGTTGGCAGGCGGTGGGGGCAGCCTGCTGATCCTGA...AGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGGCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCCATTTGTCAGGATCAGCAGGCTaGCCCCACCGCCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: AWGLTSIAHAEVPCHSHLSGSAG*PHRLPT
Trigger: TGTTGGCAGGCGGTGGGGGCAGCCTGCTGATCCTGA...CAAATGGGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
CDS-3UTR CCA 90 bp GATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGCCCAGCCACAGCTGCTaGCAGTTCATGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: DLRSCACYSTCKVLLSRQPSHSC*QFMVPP
Trigger: TGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGG...CTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GCATCATGGCATCCAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGCCCAGCCACAGCTGCTaGCAGTTCATGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: ASWHPVHYCKGLAWDWVLPSHSC*QFMVPP
Trigger: TGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGG...CAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATGCCATGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS-3UTR CCA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGCCAGCCTGCACCTCTTaGAAGGTCAAGGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGEPACTS*KVKGAT
Trigger: TGTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGG...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACACACACTGCCCAGCTCTaGGATGTCGGCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTHTAQL*DVGMGQ
Trigger: CTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTG...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGCCAAGCCCCAGAGCATaGCCCACTTCATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: DLRSCACYSTCKVLLSRQPSPRA*PTSWAA
Trigger: TGCAGCCCATGAAGTGGGCCATGCTCTGGGGCTTGG...CTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTCCAAGCCCCAGAGCATaGCCCACTTCATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGPSPRA*PTSWAA
Trigger: TGCAGCCCATGAAGTGGGCCATGCTCTGGGGCTTGG...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGGGGAAATGAAAGGGTaGGTGGTGGAGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: DLRSCACYSTCKVLLSRQGEMKG*VVEPQG
Trigger: CCCCTGAGGCTCCACCACCCACCCTTTCATTTCCCC...CTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGCCCTGGATATGGGATaGGTGGGGAGAGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PRHLPPPLTSREEMTQLEALDMG*VGRGER
Trigger: CCTCTCCCCTCTCCCCACCCATCCCATATCCAGGGC...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR CAA 72 bp CCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTaGGCGGCCATGGAAGGAGAGGCGGATGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PRPIKSIGTVRA*AAMEGEADVSR
Trigger: GCGGCTGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CAA 72 bp TCCATTGCTCATGCTGAAGTCCCATGTCACTCCCATTaGTCCAGGCCTCAGGATCAGCAGGCTGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: SIAHAEVPCHSH*SRPQDQQAAPT
Trigger: GGTGGGGGCAGCCTGCTGATCCTGAGGCCTGGACAAATGGGAGTGACATGGGACTTCAGCATGAGCAATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS-3UTR TCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCCGTGCCTCTGACCTaGGATTTCTGGGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGSVPLT*DFWEPW
Trigger: CCAAGGCTCCCAGAAATCTCAGGTCAGAGGCACGGA...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGGCTGTCCGTGCCTCTaGCCTGAGATTTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PRCIKEDISLPWAARLQWGCPCL*PEISGS
Trigger: GCTCCCAGAAATCTCAGGTCAGAGGCACGGACAGCC...CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCTTCATGGGCTGCAATaGTGCGCAGGTTCACCCCAC +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQLHGLQ*CAGSPH
Trigger: GTGGGGTGAACCTGCGCATCATTGCAGCCCATGAAG...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTCTTCATGGGCTGCAATaGTGCGCAGGTTCACCCCAC +
Preference number: 4 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGLHGLQ*CAGSPH
Trigger: GTGGGGTGAACCTGCGCATCATTGCAGCCCATGAAG...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTGGAACACCTTTTGGTTaGGAGGCCAATAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: DSAILPTHSSRGLVWHSRGTPFG*EANREL
Trigger: CAGCTCTCTATTGGCCTCTCAACCAAAAGGTGTTCC...ACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTCTCGAAGCTGCTGGTTaGGGCGCCAGTAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGLEAAG*GASRLC
Trigger: GCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAG...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TGGATATGGGATGGGTGGGGAGAGGGGAGAGGAAGAGGAGAGAGCTTAGGACCCCCTCCAGAGAAGAGATaGCACAGTTGGAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: WIWDGWGEGRGRGESLGPPPEKR*HSWKGC
Trigger: ACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGG...GGGTCCTAAGCTCTCTCCTCTTCCTCTCCCCTCTCCCCACCCATCCCATATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR GCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGAAGCCCAGCCACAGCTaGTGGCAGTTCATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQKPSHS*WQFMVP
Trigger: TGGGACCATGAACTGCCAGCAGCTGTGGCTGGGCTT...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGAACGAGGCTGCCTCATaGGGGCCCTTGTGGCATCAT +
Preference number: 4 (lower is better)
Translates to: DLRSCACYSTCKVLLSRQNEAAS*GPLWHH
Trigger: ATGATGCCACAAGGGCCCGCATGAGGCAGCCTCGTT...CTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GTATTCCCACCTGATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTCAGCCGCACCAGCCTaGACCTCTTGGAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: VFPPDGVVSIVRGRQCIQSAAPA*TSWKVK
Trigger: CTTGACCTTCCAAGAGGTGCAGGCTGGTGCGGCTGA...CTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATCAGGTGGGAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR GCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGTCAGCCGCACCAGCCTaGACCTCTTGGAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQSAAPA*TSWKVK
Trigger: CTTGACCTTCCAAGAGGTGCAGGCTGGTGCGGCTGA...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GCATCATGGCATCCAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTCAGCCGCACCAGCCTaGACCTCTTGGAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: ASWHPVHYCKGLAWDWVLSAAPA*TSWKVK
Trigger: CTTGACCTTCCAAGAGGTGCAGGCTGGTGCGGCTGA...CAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATGCCATGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000552763.1
ENST00000552872.5
CDS-3UTR GCA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTACGTCGAAGTGCACACTaGCCAGCTCTGGGATGTCGG +
Preference number: 4 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVRRSAH*PALGCR
Trigger: CCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACG...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGTGGGAATATCGGGAGTaGCCAAGCCCCAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQWEYRE*PSPRAW
Trigger: CCATGCTCTGGGGCTTGGGCACTCCCGATATTCCCA...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTGAGAGCCTGGATCCCTaGCACATCATCTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGESLDP*HIIWVQ
Trigger: CTGCACCCAGATGATGTGGCAGGGATCCAGGCTCTC...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp ATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGAGGGAGGGGAGAGCCTGGATCCCTaGCACATCATCTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: IKEDISLPWAARLQWEGGESLDP*HIIWVQ
Trigger: CTGCACCCAGATGATGTGGCAGGGATCCAGGCTCTC...CCCTCCCTCCCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp GTAGACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCGTCCGGGGACGACAGTaGATCCAGTTGTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: VDSAILPTHSSRGLVWHSVRGRQ*IQLWEI
Trigger: TATTTCCCACAACTGGATGCACTGTCGTCCCCGGAC...GGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTGCCTGCCTCAGGACCTaGCTTCCCCAAAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: EAPVDFALEEVDSAILPTACLRT*LPQKLA
Trigger: AGCCAGCTTTTGGGGAAGGCAGGTCCTGAGGCAGGC...AGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGGCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp GGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACGATTTCTGGGAGCCTTaGGGGAGCAGTGCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: GVGSVRGLRSTVLRLLQHDFWEP*GSSARQ
Trigger: CTGCCTAGCACTGCTCCCCCAAGGCTCCCAGAAATC...GTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GCATCATGGCATCCAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGGCTGCTGGCAGTTCATaGTCCCACCAGACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ASWHPVHYCKGLAWDWVLAAGSS*SHQTRA
Trigger: AGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGC...CAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATGCCATGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS-3UTR CCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCCCCAGCCACAGCTGCTaGCAGTTCATGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPPSHSC*QFMVPP
Trigger: TGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGG...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCATGCGGGCCCTTGTaGCATCATCCAGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGSCGPL*HHPADL
Trigger: CAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGA...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAGAGCTTTGGCGGCCATaGAAGGAGAGGCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVELWRP*KERRMS
Trigger: TGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTC...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTACACACTGCCCAGCTCTaGGATGTCGGCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LYSKLLVEAPVDFALEEVHTAQL*DVGMGQ
Trigger: CTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTG...TACTTCTTCAAGGGCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGGCATGGCCCACTTCATaGGCTGCAATGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGAWPTS*AAMMRR
Trigger: CCTGCGCATCATTGCAGCCCATGAAGTGGGCCATGC...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGGGGGCCATGAGGGCCTaGGAATATCGGGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RKVVAGVGSVRGLRSTVLGAMRA*EYRECP
Trigger: TGGGCACTCCCGATATTCCCAGGCCCTCATGGCCCC...CAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTGCACTGGGGGCACAGTaGGCAGCTCTGTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGALGAQ*AALSLL
Trigger: AAGAAGAGACAGAGCTGCCCACTGTGCCCCCAGTGC...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAGGGGCCCCAGCATCATaGCATCCAGTTCACTACTGC +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVGAPAS*HPVHYC
Trigger: GCAGTAGTGAACTGGATGCCATGATGCTGGGGCCCC...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548629.5
CDS-3UTR CCA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGAGCCGAGGGCTGGTTTaGCACTCCCGTAAACAAACC +
Preference number: 4 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGESRGLV*HSRKQT
Trigger: GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGACAGCAGCATCCAGGTTTCCGGGGAGCCCCTCCCAAAGGGCAGACACTCGGAAAATGCACAGGAAAGTaGTGGCTGGAGTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RQQHPGFRGAPPKGQTLGKCTGK*WLELEV
Trigger: CACTTCCAACTCCAGCCACCACTTTCCTGTGCATTT...TCCGAGTGTCTGCCCTTTGGGAGGGGCTCCCCGGAAACCTGGATGCTGCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GTAGACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCGCCTTCCCCAAAAGCTaGCTTCTTGCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VDSAILPTHSSRGLVWHSAFPKS*LLAPRR
Trigger: TCTCCTTGGAGCAAGAAGCCAGCTTTTGGGGAAGGC...GGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAAGTTGGGTTTCTGTTTaGCCTTTCCCCCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVSWVSV*PFPLGP
Trigger: GGGGCCCAGGGGGAAAGGCCAAACAGAAACCCAACT...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTAGTTGGGTTTCTGTTTaGCCTTTCCCCCTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGSWVSV*PFPLGP
Trigger: GGGGCCCAGGGGGAAAGGCCAAACAGAAACCCAACT...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp GTCCAGAACTCGTCTTCGTCGAAGTGCACACTGCCCAGCTCTGGGATGTCGGCACCTCACCCAGCATCATaGCATCCAGTTCACTACTGC +
Preference number: 4 (lower is better)
Translates to: VQNSSSSKCTLPSSGMSAPHPAS*HPVHYC
Trigger: GCAGTAGTGAACTGGATGCCATGATGCTGGGTGAGG...TGCCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGAGTTCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR CCA 90 bp GACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAGCCACCTTTAATTTaGCTCCGAACTCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: DSAILPTHSSRGLVWHSRKPPLI*LRTLPP
Trigger: GGGAGGGAGAGTTCGGAGCCAAATTAAAGGTGGCTT...ACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp TCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCACAAAGCCACCTTTAATTTaGCTCCGAACTCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SLLQGSGMGLGSVGTGGTKPPLI*LRTLPP
Trigger: GGGAGGGAGAGTTCGGAGCCAAATTAAAGGTGGCTT...TGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
3UTR CAA 72 bp CAGCGGCCCAGCAACAGGTATTTAAGGGTCTTCTGGTaGAAGGGATCCTCTAGGCCACAACGAGGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QRPSNRYLRVFW*KGSSRPQRGCL
Trigger: GAGGCAGCCTCGTTGTGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATACCTGTTGCTGGGCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR TCA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAATCCGTGCCTCTGACCTaGGATTTCTGGGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PRHLPPPLTSREEMTQLESVPLT*DFWEPW
Trigger: CCAAGGCTCCCAGAAATCTCAGGTCAGAGGCACGGA...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TTCCCACCTGATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGGTTTGGGGTAGCTGCTaGAGTCAGTTCGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: FPPDGVVSIVRGRQCIQLVWGSC*SQFGLA
Trigger: AGCTAGCCCGAACTGACTTCAGCAGCTACCCCAAAC...CAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATCAGGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAGTTTGGGGTAGCTGCTaGAGTCAGTTCGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVVWGSC*SQFGLA
Trigger: AGCTAGCCCGAACTGACTTCAGCAGCTACCCCAAAC...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp ACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCTGCACCGGTTATGCCCGTACCTaGGGGAGTGGTATTCCCACC +
Preference number: 4 (lower is better)
Translates to: TEPGSPASAVAALFFLCTGYART*GSGIPT
Trigger: GGTGGGAATACCACTCCCTCAGGTACGGGCATAACC...GGTGCAGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTGAAGTGTTAGAGGCCTaGGATCTACGGTCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGEVLEA*DLRSCA
Trigger: GGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTC...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAGGCCACAACGAGGCTaGCTCATGCGGGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: WVSSQYSNVVSVAERVVSRPQRG*LMRALV
Trigger: CACAAGGGCCCGCATGAGGCAGCCTCGTTGTGGCCT...GGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR GCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAATGCGGAAAGTCAGGTaGTTCTTTCTCCAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVMRKVR*FFLQRP
Trigger: GGGCCGCTGGAGAAAGAAGCACCTGACTTTCCGCAT...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR GCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCTCGTCTTCGTCGAAGTaGACACTGCCCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPSSSSK*TLPSSG
Trigger: CCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGA...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp CGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTTCGTCTTCGTCGAAGTaGACACTGCCCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSCACYSTCKVLLSRQVFSSSSK*TLPSSG
Trigger: CCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGA...AAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAGCCACATCATCTGGGTaGAGCTTAAAGTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVATSSG*SLKWGR
Trigger: CCGGCCCCACTTTAAGCTGCACCCAGATGATGTGGC...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp ATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCGAGAGCCTGGATCCCTaGCACATCATCTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ILPTHSSRGLVWHSRKQTESLDP*HIIWVQ
Trigger: CTGCACCCAGATGATGTGGCAGGGATCCAGGCTCTC...GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGCATCCAGTTCACTACTaGAAGGGTCTGGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGEHPVHY*KGLAWD
Trigger: GTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATG...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TACAGTCCACACATAGTCCCCCTTGAAAGCATAGGTCTTCCCACGGGGCCCTCCCATCCAGTTCACTACTaGAAGGGTCTGGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: YSPHIVPLESIGLPTGPSHPVHY*KGLAWD
Trigger: GTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATG...GGAGGGCCCCGTGGGAAGACCTATGCTTTCAAGGGGGACTATGTGTGGACTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR GCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCGCTAGCTCGTCCCACTaGCAGTACCCGGAGCCCTTA +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSASSSH*QYPEPL
Trigger: TAAGGGCTCCGGGTACTGGCAGTGGGACGAGCTAGC...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGGCCTGCTACAGCACCTaGAAGGTTCTACTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGEACYST*KVLLSR
Trigger: TCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGC...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTACGGTCTTGCGCCTaGTACAGCACCTGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: GVGSVRGLRSTVLRLLQHLRSCA*YSTCKV
Trigger: AACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG...GTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp AGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTGCTAGCTCGTCCCACTaGCAGTACCCGGAGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SPGTTVHPVVGNISGIAFASSSH*QYPEPL
Trigger: AAGGGGCTCCGGGTACTGGCAGTGGGACGAGCTAGC...AAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409200.7
CDS-3UTR CCA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAGATTTCTGGGAGCCTTaGGGGAGCAGTGCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVDFWEP*GSSARQ
Trigger: CTGCCTAGCACTGCTCCCCCAAGGCTCCCAGAAATC...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGCTGCTGGCAGTTCATaGTCCCACCAGACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PRCIKEDISLPWAARLQWAAGSS*SHQTRA
Trigger: AGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGC...CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGCTGCTGGCAGTTCATaGTCCCACCAGACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTAAGSS*SHQTRA
Trigger: AGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGC...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAGCTGCTGGCAGTTCATaGTCCCACCAGACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVAAGSS*SHQTRA
Trigger: AGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGC...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTGCTGCTGGCAGTTCATaGTCCCACCAGACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: EAPVDFALEEVDSAILPTAAGSS*SHQTRA
Trigger: AGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGC...AGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGGCGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTTATGCCCGTACCTGCCCAGCCACAGCTGCTaGCAGTTCATGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: QTWFLWLREWYPRLCPYLPSHSC*QFMVPP
Trigger: TGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGG...CAGGTACGGGCATAACCTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCCATTTGGAGCTTTGGCGGCCATaGAAGGAGAGGCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: AWGLTSIAHAEVPCHSHLELWRP*KERRMS
Trigger: TGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTC...CAAATGGGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CCA 90 bp GGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACGAACAGTACGAGCTTTaGCGGCCATGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GVGSVRGLRSTVLRLLQHEQYEL*RPWKER
Trigger: CCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTC...GTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCGTAGCCCTCGTAGACTaGGGCCATGAGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFVALVD*GHEGLG
Trigger: TCCCAGGCCCTCATGGCCCCAGTCTACGAGGGCTAC...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGGTAGCCCTCGTAGACTaGGGCCATGAGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VGNISGIAFLYSKLLVEAVALVD*GHEGLG
Trigger: TCCCAGGCCCTCATGGCCCCAGTCTACGAGGGCTAC...CGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTACCCTGCCACATCATCTaGGTGCAGCTTAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVPCHII*VQLKVG
Trigger: CCCCACTTTAAGCTGCACCCAGATGATGTGGCAGGG...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGCACTGGGGGCACAGTaGGCAGCTCTGTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTALGAQ*AALSLL
Trigger: AAGAAGAGACAGAGCTGCCCACTGTGCCCCCAGTGC...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTGGGGCCCCAGCATCATaGCATCCAGTTCACTACTGC +
Preference number: 4 (lower is better)
Translates to: RSCACYSTCKVLLSRQVFGAPAS*HPVHYC
Trigger: GCAGTAGTGAACTGGATGCCATGATGCTGGGGCCCC...AAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548629.5
CDS-3UTR CCA 90 bp TTCCCACCTGATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGAGCCGAGGGCTGGTTTaGCACTCCCGTAAACAAACC +
Preference number: 4 (lower is better)
Translates to: FPPDGVVSIVRGRQCIQLSRGLV*HSRKQT
Trigger: GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT...CAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATCAGGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGATAGCAGCCGAGGGCTaGTTTGGCACTCCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQIAAEG*FGTPVN
Trigger: GTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTAT...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACACCGTACCTGAGGGAGTaGTATTCCCACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTPYLRE*YSHLMG
Trigger: CCCCATCAGGTGGGAATACCACTCCCTCAGGTACGG...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGCTGTGGCTGAGAGAGTaGTATCCAAGGTTATGCCCG +
Preference number: 4 (lower is better)
Translates to: AAEGWFGTPVNKPLIGLGLWLRE*YPRLCP
Trigger: CGGGCATAACCTTGGATACCACTCTCTCAGCCACAG...CCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTGCAGCAAGGCTACAATaGGAGGGAGGGAGAACATGG +
Preference number: 4 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGAARLQ*EGGRTW
Trigger: CCATGTTCTCCCTCCCTCCCATTGTAGCCTTGCTGC...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp GCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGCCTCACCCAGCATCATaGCATCCAGTTCACTACTGC +
Preference number: 4 (lower is better)
Translates to: AAEGWFGTPVNKPLIGLGPHPAS*HPVHYC
Trigger: GCAGTAGTGAACTGGATGCCATGATGCTGGGTGAGG...CCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTTCCGTGCCTCTGACCTaGGATTTCTGGGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HSSRGLVWHSRKQTLDWFSVPLT*DFWEPW
Trigger: CCAAGGCTCCCAGAAATCTCAGGTCAGAGGCACGGA...AAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGGGCTGTCCGTGCCTCTaGCCTGAGATTTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VGNISGIAFLYSKLLVEAGCPCL*PEISGS
Trigger: GCTCCCAGAAATCTCAGGTCAGAGGCACGGACAGCC...CGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGATCATCCAGCTGACCTaGGACTGGAAGTTCAGATGC +
Preference number: 4 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGEIIQLT*DWKFRC
Trigger: GCATCTGAACTTCCAGTCTCAGGTCAGCTGGATGAT...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
CDS-3UTR TCA 90 bp CAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTTATGCCCGTACCTGCTTCATGGGCTGCAATaGTGCGCAGGTTCACCCCAC +
Preference number: 4 (lower is better)
Translates to: QTWFLWLREWYPRLCPYLLHGLQ*CAGSPH
Trigger: GTGGGGTGAACCTGCGCATCATTGCAGCCCATGAAG...CAGGTACGGGCATAACCTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp ACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAGGAAACGTAGACTGGGGCCATaGGGGCCTGGGAATATCGGG +
Preference number: 4 (lower is better)
Translates to: TSREEMTQLEGLSKTDRKRRLGP*GPGNIG
Trigger: CCCGATATTCCCAGGCCCTCATGGCCCCAGTCTACG...TTTCCTGTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCGTTTGGGGTAGCTGCTaGAGTCAGTTCGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPVWGSC*SQFGLA
Trigger: AGCTAGCCCGAACTGACTTCAGCAGCTACCCCAAAC...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp TCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTGGTTATGCCCGTACCTaGGGGAGTGGTATTCCCACC +
Preference number: 4 (lower is better)
Translates to: SGIAFLYSKLLVEAPVDFGYART*GSGIPT
Trigger: GGTGGGAATACCACTCCCTCAGGTACGGGCATAACC...AAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp AGGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGGGTTATGCCCGTACCTaGGGGAGTGGTATTCCCACC +
Preference number: 4 (lower is better)
Translates to: RKVVAGVGSVRGLRSTVLGYART*GSGIPT
Trigger: GGTGGGAATACCACTCCCTCAGGTACGGGCATAACC...CAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTACCTCCAGAGAAGAGATaGCACAGTTGGAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVPPEKR*HSWKGC
Trigger: ACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGG...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GTATTCCCACCTGATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGCTCCATTGCTCATGCTaGAGTCCCATGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: VFPPDGVVSIVRGRQCIQLHCSC*SPMSLP
Trigger: TGGGAGTGACATGGGACTTCAGCATGAGCAATGGAG...CTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATCAGGTGGGAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGTGGGAATATCGGGAGTaGCCAAGCCCCAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVWEYRE*PSPRAW
Trigger: CCATGCTCTGGGGCTTGGGCACTCCCGATATTCCCA...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGCCACATCATCTGGGTaGAGCTTAAAGTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVATSSG*SLKWGR
Trigger: CCGGCCCCACTTTAAGCTGCACCCAGATGATGTGGC...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATGCTAGCTCGTCCCACTaGCAGTACCCGGAGCCCTTA +
Preference number: 4 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHASSSH*QYPEPL
Trigger: TAAGGGCTCCGGGTACTGGCAGTGGGACGAGCTAGC...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR GCA 90 bp ATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGAGGGAGGGGTCCGGGGACGACAGTaGATCCAGTTGTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: IKEDISLPWAARLQWEGGVRGRQ*IQLWEI
Trigger: TATTTCCCACAACTGGATGCACTGTCGTCCCCGGAC...CCCTCCCTCCCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGGTCCGGGGACGACAGTaGATCCAGTTGTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQVRGRQ*IQLWEI
Trigger: TATTTCCCACAACTGGATGCACTGTCGTCCCCGGAC...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGGTATCCAAGGTTATaGCCGTACCTGAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGWYPRL*PYLREW
Trigger: CCACTCCCTCAGGTACGGGCATAACCTTGGATACCA...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGTGGTATCCAAGGTTATaGCCGTACCTGAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: DLRSCACYSTCKVLLSRQWYPRL*PYLREW
Trigger: CCACTCCCTCAGGTACGGGCATAACCTTGGATACCA...CTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGGCCTGCTACAGCACCTaGAAGGTTCTACTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQACYST*KVLLSR
Trigger: TCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGC...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCCACCTGCCAGAGTCTTaGCTTTTGCCCAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPHLPES*LLPKGA
Trigger: GGCTCCTTTGGGCAAAAGGCAAGACTCTGGCAGGTG...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp ATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGCTGCTGGCAGTTCATaGTCCCACCAGACGAGAGCT +
Preference number: 4 (lower is better)
Translates to: IAAEGWFGTPVNKPLIGLAAGSS*SHQTRA
Trigger: AGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGC...CAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GCCATGGAAGGAGAGGCGGATGTCAGCCGCACCAGCCTGCACCTCTTGGAAGGTTATTTAAGGGTCTTCTaGTTGAAGGGATCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: AMEGEADVSRTSLHLLEGYLRVF*LKGSSR
Trigger: CCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATA...ACCTTCCAAGAGGTGCAGGCTGGTGCGGCTGACATCCGCCTCTCCTTCCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR CCA 90 bp CTTGCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTGGCGGCCATGGAACCAGCCTGCACCTCTTaGAAGGTCAAGGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: LARPIKSIGTVRALAAMEPACTS*KVKGAT
Trigger: TGTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGG...TTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CCA 90 bp GATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATAGAGCTTTGGCGGCCATaGAAGGAGAGGCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: DGVVSIVRGRQCIQLWEIELWRP*KERRMS
Trigger: TGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTC...TATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CCA 90 bp CTTGGTAAGTGCCTGCCTAAGCCACCTTTAATTTGGCTCCGAACTCTCCCTCCCGAACAGTACGAGCTTTaGCGGCCATGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LGKCLPKPPLIWLRTLPPEQYEL*RPWKER
Trigger: CCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTC...GGGAGGGAGAGTTCGGAGCCAAATTAAAGGTGGCTTAGGCAGGCACTTACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CCA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAGAACAGTACGAGCTTTaGCGGCCATGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVEQYEL*RPWKER
Trigger: CCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTC...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCGCATGGCCCACTTCATaGGCTGCAATGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSAWPTS*AAMMRR
Trigger: CCTGCGCATCATTGCAGCCCATGAAGTGGGCCATGC...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATCCAAGCCCCAGAGCATaGCCCACTTCATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHPSPRA*PTSWAA
Trigger: TGCAGCCCATGAAGTGGGCCATGCTCTGGGGCTTGG...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TGCTTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGGTAGCCCTCGTAGACTaGGGCCATGAGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CFSPWVALISSLTRTLFQVALVD*GHEGLG
Trigger: TCCCAGGCCCTCATGGCCCCAGTCTACGAGGGCTAC...CTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAACCCTGCCACATCATCTaGGTGCAGCTTAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PRHLPPPLTSREEMTQLEPCHII*VQLKVG
Trigger: CCCCACTTTAAGCTGCACCCAGATGATGTGGCAGGG...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATAGCACTGGGGGCACAGTaGGCAGCTCTGTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: DGVVSIVRGRQCIQLWEIALGAQ*AALSLL
Trigger: AAGAAGAGACAGAGCTGCCCACTGTGCCCCCAGTGC...TATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGCACTGGGGGCACAGTaGGCAGCTCTGTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVALGAQ*AALSLL
Trigger: AAGAAGAGACAGAGCTGCCCACTGTGCCCCCAGTGC...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACTACTGCAAGGGTCTaGCATGGGACTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQTTARV*HGTGFC
Trigger: ACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGT...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTAGCCGAGGGCTGGTTTaGCACTCCCGTAAACAAACC +
Preference number: 4 (lower is better)
Translates to: RSCACYSTCKVLLSRQVFSRGLV*HSRKQT
Trigger: GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT...AAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTATAGCAGCCGAGGGCTaGTTTGGCACTCCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: RSCACYSTCKVLLSRQVFIAAEG*FGTPVN
Trigger: GTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTAT...AAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGCCGTACCTGAGGGAGTaGTATTCCCACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVPYLRE*YSHLMG
Trigger: CCCCATCAGGTGGGAATACCACTCCCTCAGGTACGG...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGCTGTGGCTGAGAGAGTaGTATCCAAGGTTATGCCCG +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGLWLRE*YPRLCP
Trigger: CGGGCATAACCTTGGATACCACTCTCTCAGCCACAG...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATGGGGAAATGAAAGGGTaGGTGGTGGAGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHGEMKG*VVEPQG
Trigger: CCCCTGAGGCTCCACCACCCACCCTTTCATTTCCCC...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCACACCTTGCTCAGTTTACTaGCCATGCTGTTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SLLQGSGMGLGSVGTGGTPCSVY*PCCFLA
Trigger: TGCAAGAAAACAGCATGGCCAGTAAACTGAGCAAGG...TGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAGCCTTCCCCAAAAGCTaGCTTCTTGCTCCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVAFPKS*LLAPRR
Trigger: TCTCCTTGGAGCAAGAAGCCAGCTTTTGGGGAAGGC...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp TTCCCACCTGATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGGAGCACTGTCTTCCATaGGGCTTCCACTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FPPDGVVSIVRGRQCIQLEHCLP*GFHFSP
Trigger: AGGAGAGAAGTGGAAGCCCCATGGAAGACAGTGCTC...CAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATCAGGTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp TTCTTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCCGCCTGCCAACAGCCTaGAGGGGAGGGGCCTCACCC +
Preference number: 4 (lower is better)
Translates to: FFLCTPKQRANHLDKSSVRLPTA*RGGASP
Trigger: GGGTGAGGCCCCTCCCCTCCAGGCTGTTGGCAGGCG...GACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp TGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCCAGTACCCGGAGCCCTaGATATGGGATGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: WVSSQYSNVVSVAERVVSQYPEP*IWDGWG
Trigger: TCCCCACCCATCCCATATCCAGGGCTCCGGGTACTG...GGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
3UTR CAA 72 bp GGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTaGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: GVGSVRGLRSTV*RLLQHLQGSTE
Trigger: CTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
3UTR CAA 72 bp GTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTaGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VDFALEEVDSAI*PTHSSRGLVWH
Trigger: GTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACTCCGTGCCTCTGACCTaGGATTTCTGGGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDSVPLT*DFWEPW
Trigger: CCAAGGCTCCCAGAAATCTCAGGTCAGAGGCACGGA...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGGCTGTCCGTGCCTCTaGCCTGAGATTTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VSSQYSNVVSVAERVVSKGCPCL*PEISGS
Trigger: GCTCCCAGAAATCTCAGGTCAGAGGCACGGACAGCC...CTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCCCCCGTAGACTGGGGCCATaGGGGCCTGGGAATATCGGG +
Preference number: 4 (lower is better)
Translates to: FLCTPKQRANHLDKSSVPRRLGP*GPGNIG
Trigger: CCCGATATTCCCAGGCCCTCATGGCCCCAGTCTACG...GGGGACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp GGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACACACATAGTCCCCCTTaGAAGCATAGGTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GVGSVRGLRSTVLRLLQHTHSPP*KHRSSH
Trigger: GTGGGAAGACCTATGCTTTCAAGGGGGACTATGTGT...GTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGACACATAGTCCCCCTTaGAAGCATAGGTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQTHSPP*KHRSSH
Trigger: GTGGGAAGACCTATGCTTTCAAGGGGGACTATGTGT...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp ATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGAGGGAGGGACACATAGTCCCCCTTaGAAGCATAGGTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: IKEDISLPWAARLQWEGGTHSPP*KHRSSH
Trigger: GTGGGAAGACCTATGCTTTCAAGGGGGACTATGTGT...CCCTCCCTCCCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCCTCGAAGCTGCTGGTTaGGGCGCCAGTAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFLEAAG*GASRLC
Trigger: GCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAG...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCCTCGAAGCTGCTGGTTaGGGCGCCAGTAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: YSPGTTVHPVVGNISGIALEAAG*GASRLC
Trigger: GCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAG...GGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACCTCGAAGCTGCTGGTTaGGGCGCCAGTAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDLEAAG*GASRLC
Trigger: GCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAG...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp AGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCGAAGCTGCTGGTTaGGGCGCCAGTAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: SPGTTVHPVVGNISGIAFLEAAG*GASRLC
Trigger: GCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAG...AAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCGTGGTTTCTGTGGCTaGGAGAGTGGTATCCAAGGT +
Preference number: 4 (lower is better)
Translates to: RSCACYSTCKVLLSRQVFRGFCG*ESGIQG
Trigger: ACCTTGGATACCACTCTCTCAGCCACAGAAACCACG...AAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp ACTCTCCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTGGCGGCCATGGCGTGGTTTCTGTGGCTaGGAGAGTGGTATCCAAGGT +
Preference number: 4 (lower is better)
Translates to: TLPGPSKVLEQYELWRPWRGFCG*ESGIQG
Trigger: ACCTTGGATACCACTCTCTCAGCCACAGAAACCACG...CCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR TCA 90 bp AGGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGGAAGTGTTAGAGGCCTaGGATCTACGGTCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: RKVVAGVGSVRGLRSTVLEVLEA*DLRSCA
Trigger: GGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTC...CAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGGGGTATCTCAGGCTaGCTAACAATTTGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTGGISG*LTICPL
Trigger: GAGAGGGCAAATTGTTAGTCAGCCTGAGATACCCCC...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR TCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTCCACACCTTGTCTCCTaGGAGCATGTGAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGPHLVS*EHVRKE
Trigger: TTCTTTCCTCACATGCTCTCAGGAGACAAGGTGTGG...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR GCA 90 bp CCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTCATAGCAAGCCCAGCCACAGCTaGTGGCAGTTCATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PVDFALEEVDSAILPTHSKPSHS*WQFMVP
Trigger: TGGGACCATGAACTGCCAGCAGCTGTGGCTGGGCTT...GCTATGAGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TGTCTCTTCTTCTTCCTCATCCCTTATCACTGGACTCTTCTTGCCAGGCCCATCAAGCCCAGCCACAGCTaGTGGCAGTTCATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: CLFFFLIPYHWTLLARPIKPSHS*WQFMVP
Trigger: TGGGACCATGAACTGCCAGCAGCTGTGGCTGGGCTT...GATGGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAGGAAGAAGAAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR GCA 90 bp CCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTCATAGCAACGAGGCTGCCTCATaGGGGCCCTTGTGGCATCAT +
Preference number: 4 (lower is better)
Translates to: PVDFALEEVDSAILPTHSNEAAS*GPLWHH
Trigger: ATGATGCCACAAGGGCCCGCATGAGGCAGCCTCGTT...GCTATGAGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR GCA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCGTCTTCGTCGAAGTaGACACTGCCCAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHSSSSK*TLPSSG
Trigger: CCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGA...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCGCCCACTTCATGGGCTaGAATGATGCGCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSAHFMG*NDAQVH
Trigger: GTGAACCTGCGCATCATTGCAGCCCATGAAGTGGGC...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATAGCCCACTTCATGGGCTaGAATGATGCGCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: DGVVSIVRGRQCIQLWEIAHFMG*NDAQVH
Trigger: GTGAACCTGCGCATCATTGCAGCCCATGAAGTGGGC...TATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTGCCCACTTCATGGGCTaGAATGATGCGCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SGIAFLYSKLLVEAPVDFAHFMG*NDAQVH
Trigger: GTGAACCTGCGCATCATTGCAGCCCATGAAGTGGGC...AAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATCACTGGACTCTTCTTaGCATAGAGAGCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVSLDSS*HREPGS
Trigger: GGATCCAGGCTCTCTATGGCAAGAAGAGTCCAGTGA...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp ACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAGGAAAGCTAGCTCGTCCCACTaGCAGTACCCGGAGCCCTTA +
Preference number: 4 (lower is better)
Translates to: TSREEMTQLEGLSKTDRKASSSH*QYPEPL
Trigger: TAAGGGCTCCGGGTACTGGCAGTGGGACGAGCTAGC...TTTCCTGTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR GCA 90 bp GCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCCATTTGGCCTGCTACAGCACCTaGAAGGTTCTACTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: AWGLTSIAHAEVPCHSHLACYST*KVLLSR
Trigger: TCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGC...CAAATGGGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR GCA 90 bp GCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGATGTACCAGACACTGTaGCAGGCACTTCACATACAG +
Preference number: 4 (lower is better)
Translates to: AAEGWFGTPVNKPLIGLGMYQTL*QALHIQ
Trigger: CTGTATGTGAAGTGCCTGGCACAGTGTCTGGTACAT...CCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCTGCAAGTGCCTTCTCTaGTTCTCACCGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSCKCLL*FSPWVA
Trigger: TGCCACCCACGGTGAGAAGCAGAGAAGGCACTTGCA...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACACCTGGTCTTCAGGGCTaGATAGGATGCAAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTPGLQG*IGCKCL
Trigger: AAGGCACTTGCATCCTATGCAGCCCTGAAGACCAGG...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp ATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGCACCTGCCAGAGTCTTaGCTTTTGCCCAAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: IAAEGWFGTPVNKPLIGLHLPES*LLPKGA
Trigger: GGCTCCTTTGGGCAAAAGGCAAGACTCTGGCAGGTG...CAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR GCA 90 bp TTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCCCCCCACCCCCAGCCCACTaGAGCTGCAGAACATCTCCC +
Preference number: 4 (lower is better)
Translates to: FLCTPKQRANHLDKSSVPPPPAH*SCRTSP
Trigger: GGGAGATGTTCTGCAGCTGCAGTGGGCTGGGGGTGG...GGGGACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCGATTTCTGGGAGCCTTaGGGGAGCAGTGCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFDFWEP*GSSARQ
Trigger: CTGCCTAGCACTGCTCCCCCAAGGCTCCCAGAAATC...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATCATGCGGGCCCTTGTaGCATCATCCAGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: VSIVRGRQCIQLWEIFLGSCGPL*HHPADL
Trigger: CAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGA...TCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CCA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACCCAGCCTGCACCTCTTaGAAGGTCAAGGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDPACTS*KVKGAT
Trigger: TGTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGG...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR CCA 90 bp GATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATAGAACAGTACGAGCTTTaGCGGCCATGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: DGVVSIVRGRQCIQLWEIEQYEL*RPWKER
Trigger: CCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTC...TATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CCA 90 bp TTAAATACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCCACACTGCCCAGCTCTaGGATGTCGGCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LNTEPGSPASAVAALFFLHTAQL*DVGMGQ
Trigger: CTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTG...GAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGTATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCACTACTGCAAGGGTCTaGCATGGGACTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPTTARV*HGTGFC
Trigger: ACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGT...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp TATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCCCGTACCTGAGGGAGTaGTATTCCCACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: YSPGTTVHPVVGNISGIAPYLRE*YSHLMG
Trigger: CCCCATCAGGTGGGAATACCACTCCCTCAGGTACGG...GGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CATGGCATCCAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCAAACGTGGTTTCTGTaGCTGAGAGAGTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: HGIQFTTARVWHGTGFCGQTWFL*LREWYP
Trigger: TGGATACCACTCTCTCAGCCACAGAAACCACGTTTG...CCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GTAGACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCGTCAGTATTCAAACGTaGTTTCTGTGGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VDSAILPTHSSRGLVWHSVSIQT*FLWLRE
Trigger: CTCTCTCAGCCACAGAAACCACGTTTGAATACTGAC...GGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTGCAGCAAGGCTACAATaGGAGGGAGGGAGAACATGG +
Preference number: 4 (lower is better)
Translates to: SGIAFLYSKLLVEAPVDFAARLQ*EGGRTW
Trigger: CCATGTTCTCCCTCCCTCCCATTGTAGCCTTGCTGC...AAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACACTCTGCTTCTCACCGTaGGTGGCACTAATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTLCFSP*VALISS
Trigger: GGAGGAAATTAGTGCCACCCACGGTGAGAAGCAGAG...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp GCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCCATTTGCTCATCCCTTATCACTaGACTCTTCTTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AWGLTSIAHAEVPCHSHLLIPYH*TLLARP
Trigger: GGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAG...CAAATGGGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR TCA 90 bp CTCTTCTTCTTCCTCATCCCTTATCACTGGACTCTTCTTGCCAGGCCCATCAAATCCGTGCCTCTGACCTaGGATTTCTGGGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LFFFLIPYHWTLLARPIKSVPLT*DFWEPW
Trigger: CCAAGGCTCCCAGAAATCTCAGGTCAGAGGCACGGA...TTTGATGGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAGGAAGAAGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR TCA 90 bp CCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGATCATCCAGCTGACCTaGGACTGGAAGTTCAGATGC +
Preference number: 4 (lower is better)
Translates to: PRCIKEDISLPWAARLQWIIQLT*DWKFRC
Trigger: GCATCTGAACTTCCAGTCTCAGGTCAGCTGGATGAT...CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR TCA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGTGGCATCATCCAGCTaGCCTGAGACTGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVVASSS*PETGSS
Trigger: TGAACTTCCAGTCTCAGGTCAGCTGGATGATGCCAC...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
CDS-3UTR TCA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAACACATAGTCCCCCTTaGAAGCATAGGTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVTHSPP*KHRSSH
Trigger: GTGGGAAGACCTATGCTTTCAAGGGGGACTATGTGT...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGAGTAGACTTTGCCCTTaGAGAAGTAGACTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGSRLCP*RSRLGH
Trigger: ATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACT...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGAGTGGTATTCCCACCTaGTGGGGTAGTGTCTATAGT +
Preference number: 4 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQSGIPT*WGSVYS
Trigger: ACTATAGACACTACCCCATCAGGTGGGAATACCACT...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTCGTGGTTTCTGTGGCTaGGAGAGTGGTATCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SGIAFLYSKLLVEAPVDFRGFCG*ESGIQG
Trigger: ACCTTGGATACCACTCTCTCAGCCACAGAAACCACG...AAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGCCTGCAAGGTTCTACTaGGCAGACAGGTATTTCATT +
Preference number: 4 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGEPARFY*ADRYFI
Trigger: AATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGG...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp AGGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCCTCCAGAGAAGAGATaGCACAGTTGGAAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RKVVAGVGSVRGLRSTVLPPEKR*HSWKGC
Trigger: ACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGG...CAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp AGACAGCAGCATCCAGGTTTCCGGGGAGCCCCTCCCAAAGGGCAGACACTCGGATGCAAATGGGGAATCTaGGATTCAACAAGGTTAATT +
Preference number: 4 (lower is better)
Translates to: RQQHPGFRGAPPKGQTLGCKWGI*DSTRLI
Trigger: AATTAACCTTGTTGAATCTCAGATTCCCCATTTGCA...TCCGAGTGTCTGCCCTTTGGGAGGGGCTCCCCGGAAACCTGGATGCTGCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TGCTTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGTGGGAAGAAGGGCTCTaGGGAGCTCCAAGATACCCC +
Preference number: 4 (lower is better)
Translates to: CFSPWVALISSLTRTLFQWEEGL*GAPRYP
Trigger: GGGGTATCTTGGAGCTCCTCAGAGCCCTTCTTCCCA...CTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCCTCCATTGCTCATGCTaGAGTCCCATGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSLHCSC*SPMSLP
Trigger: TGGGAGTGACATGGGACTTCAGCATGAGCAATGGAG...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCAAAGCCCAGCCACAGCTaGTGGCAGTTCATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPKPSHS*WQFMVP
Trigger: TGGGACCATGAACTGCCAGCAGCTGTGGCTGGGCTT...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp CCAAGATTGTGTCTGTGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTAAGCCCAGCCACAGCTaGTGGCAGTTCATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PRLCLWVSSQYSNVVSVAKPSHS*WQFMVP
Trigger: TGGGACCATGAACTGCCAGCAGCTGTGGCTGGGCTT...AGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCACAGACACAATCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCTCACTGGACTCTTCTTaGCATAGAGAGCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPSLDSS*HREPGS
Trigger: GGATCCAGGCTCTCTATGGCAAGAAGAGTCCAGTGA...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTAGGCCAATAGAGAGCTaGATCCAGGTTAGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGRPIES*IQVRFY
Trigger: GTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCT...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAGGCCAATAGAGAGCTaGATCCAGGTTAGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGRPIES*IQVRFY
Trigger: GTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCT...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGAGGCCAATAGAGAGCTaGATCCAGGTTAGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: DLRSCACYSTCKVLLSRQRPIES*IQVRFY
Trigger: GTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCT...CTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTGTCCGGGGACGACAGTaGATCCAGTTGTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: SGIAFLYSKLLVEAPVDFVRGRQ*IQLWEI
Trigger: TATTTCCCACAACTGGATGCACTGTCGTCCCCGGAC...AAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATGTACCAGACACTGTaGCAGGCACTTCACATACAG +
Preference number: 4 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGMYQTL*QALHIQ
Trigger: CTGTATGTGAAGTGCCTGGCACAGTGTCTGGTACAT...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTTCCAGCCTCTGCTGTTaGTGCTCTTTTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGSSLCC*CSFLSL
Trigger: CAGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGA...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTACAAAAGCTGGCTTCTTaGTCCAAGGAGAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVQKLAS*SKERAL
Trigger: CAATGCTCTCTCCTTGGAGCAAGAAGCCAGCTTTTG...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCAGATTTCTGGGAGCCTTaGGGGAGCAGTGCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPDFWEP*GSSARQ
Trigger: CTGCCTAGCACTGCTCCCCCAAGGCTCCCAGAAATC...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp TCTCTTCTTCTTCCTCATCCCTTATCACTGGACTCTTCTTGCCAGGCCCATCAAGATTTCTGGGAGCCTTaGGGGAGCAGTGCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLLLPHPLSLDSSCQAHQDFWEP*GSSARQ
Trigger: CTGCCTAGCACTGCTCCCCCAAGGCTCCCAGAAATC...TTGATGGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAGGAAGAAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CCA 90 bp TTAAATACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCCCCAGCCACAGCTGCTaGCAGTTCATGGTCCCACCA +
Preference number: 4 (lower is better)
Translates to: LNTEPGSPASAVAALFFLPSHSC*QFMVPP
Trigger: TGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGG...GAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGTATTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCACCAGCCTGCACCTCTTaGAAGGTCAAGGGAGCCACA +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPPACTS*KVKGAT
Trigger: TGTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGG...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR CCA 90 bp GCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGGCCCATCAAAAGTATTaGAACAGTACGAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: AAEGWFGTPVNKPLIGLGAHQKY*NSTSFG
Trigger: GCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGC...CCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CCA 90 bp AGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGGGGCCATGAGGGCCTaGGAATATCGGGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SASSCGKYFWDSLSLLEAGAMRA*EYRECP
Trigger: TGGGCACTCCCGATATTCCCAGGCCCTCATGGCCCC...AGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATCCCTGCCACATCATCTaGGTGCAGCTTAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHPCHII*VQLKVG
Trigger: CCCCACTTTAAGCTGCACCCAGATGATGTGGCAGGG...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCAGCACTGGGGGCACAGTaGGCAGCTCTGTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPALGAQ*AALSLL
Trigger: AAGAAGAGACAGAGCTGCCCACTGTGCCCCCAGTGC...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp TCTCTTCTTCTTCCTCATCCCTTATCACTGGACTCTTCTTGCCAGGCCCATCAAGCACTGGGGGCACAGTaGGCAGCTCTGTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLLLPHPLSLDSSCQAHQALGAQ*AALSLL
Trigger: AAGAAGAGACAGAGCTGCCCACTGTGCCCCCAGTGC...TTGATGGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAGGAAGAAGAAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CCA 90 bp GTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGATAGCAGCCGAGGGCTaGTTTGGCACTCCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: VGNISGIAFLYSKLLVEAIAAEG*FGTPVN
Trigger: GTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTAT...CGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCACCGTACCTGAGGGAGTaGTATTCCCACCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPPYLRE*YSHLMG
Trigger: CCCCATCAGGTGGGAATACCACTCCCTCAGGTACGG...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTACAAACGTGGTTTCTGTaGCTGAGAGAGTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVQTWFL*LREWYP
Trigger: TGGATACCACTCTCTCAGCCACAGAAACCACGTTTG...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGCAAACGTGGTTTCTGTaGCTGAGAGAGTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGQTWFL*LREWYP
Trigger: TGGATACCACTCTCTCAGCCACAGAAACCACGTTTG...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGCCAAGATTGTGTCTGTaGGTGAGCAGTCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGEPRLCL*VSSQYS
Trigger: TGAATACTGACTGCTCACCCACAGACACAATCTTGG...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGAAATGCACAGGAAAGTaGTGGCTGGAGTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQKCTGK*WLELEV
Trigger: CACTTCCAACTCCAGCCACCACTTTCCTGTGCATTT...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGAAATGCACAGGAAAGTaGTGGCTGGAGTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGKCTGK*WLELEV
Trigger: CACTTCCAACTCCAGCCACCACTTTCCTGTGCATTT...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GGTGATAGCTTTTGGTCTCCTCCGGTCCACCTATTCAGAAACTTCTCATCTCCCGACATATCCCTCCCCTaGGCAGCAAGGCTACAATGG +
Preference number: 4 (lower is better)
Translates to: GDSFWSPPVHLFRNFSSPDISLP*AARLQW
Trigger: CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTC...GGGAGATGAGAAGTTTCTGAATAGGTGGACCGGAGGAGACCAAAAGCTATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAACGCAGGGTCTGTTCCTaGTTTCCCAGATGCATAAAG +
Preference number: 4 (lower is better)
Translates to: PRHLPPPLTSREEMTQLERRVCS*FPRCIK
Trigger: CTTTATGCATCTGGGAAACCAGGAACAGACCCTGCG...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp AGCTCCAAGATACCCCAACCTCCAGGCCCTTCATTAGGGGGTAGTTGGGTTTCTCGCAGGGTCTGTTCCTaGTTTCCCAGATGCATAAAG +
Preference number: 4 (lower is better)
Translates to: SSKIPQPPGPSLGGSWVSRRVCS*FPRCIK
Trigger: CTTTATGCATCTGGGAAACCAGGAACAGACCCTGCG...AGAAACCCAACTACCCCCTAATGAAGGGCCTGGAGGTTGGGGTATCTTGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp CATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTCTCATCCCTTATCACTaGACTCTTCTTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: HSSRGLVWHSRKQTLDWFLIPYH*TLLARP
Trigger: GGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAG...AAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409200.7
CDS-3UTR CCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCACCCTCCCCTCCAAGTaGCTTCCTAGTTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFTLPSK*LPSCPS
Trigger: GGAAGGACAACTAGGAAGCCACTTGGAGGGGAGGGT...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR TCA 90 bp TGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCGTGGCATCATCCAGCTaGCCTGAGACTGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: WVSSQYSNVVSVAERVVSVASSS*PETGSS
Trigger: TGAACTTCCAGTCTCAGGTCAGCTGGATGATGCCAC...GGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409200.7
CDS-3UTR TCA 90 bp ATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGTGCCAGGCAGTCCTGGAAGGCTTaGCGCAGGGCTGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: MNMELAFIKHKCTRHCARQSWKA*RRAARA
Trigger: AGCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTG...CCTGGCACAGTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR TCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTTCTCCCTTAAAGAAGTaGATCCATTGTGTTCGAGGC +
Preference number: 4 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGSPLKK*IHCVRG
Trigger: GCCTCGAACACAATGGATTCACTTCTTTAAGGGAGA...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR TCA 90 bp AGGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGGGAACACCTTTTGGTTaGGAGGCCAATAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RKVVAGVGSVRGLRSTVLGTPFG*EANREL
Trigger: CAGCTCTCTATTGGCCTCTCAACCAAAAGGTGTTCC...CAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TTTTCTCCATCTTGCTGCATTTCCAGATGTGTTCTAGTGGCCCTTAGAGCGTGGGTTTGGGGTAGCTGCTaGAGTCAGTTCGGGCTAGCT +
Preference number: 4 (lower is better)
Translates to: FSPSCCISRCVLVALRAWVWGSC*SQFGLA
Trigger: AGCTAGCCCGAACTGACTTCAGCAGCTACCCCAAAC...CCACGCTCTAAGGGCCACTAGAACACATCTGGAAATGCAGCAAGATGGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR TCA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAAGTGGTATTCCCACCTaGTGGGGTAGTGTCTATAGT +
Preference number: 4 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVSGIPT*WGSVYS
Trigger: ACTATAGACACTACCCCATCAGGTGGGAATACCACT...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCCGTGGTTTCTGTGGCTaGGAGAGTGGTATCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFRGFCG*ESGIQG
Trigger: ACCTTGGATACCACTCTCTCAGCCACAGAAACCACG...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGCCTGCAAGGTTCTACTaGGCAGACAGGTATTTCATT +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGPARFY*ADRYFI
Trigger: AATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGG...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp ATTAATGCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCCTCCATTGCTCATGCTaGAGTCCCATGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: INAWGLTSIAHAEVPCHSLHCSC*SPMSLP
Trigger: TGGGAGTGACATGGGACTTCAGCATGAGCAATGGAG...GGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGCATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
CDS-3UTR GCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGGACTGGAAGTTCAGATaGTTCCTGAAAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQDWKFR*FLKSSQ
Trigger: CTGAGAGCTTTTCAGGAAGCATCTGAACTTCCAGTC...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548629.5
CDS-3UTR GCA 90 bp AGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTTAACGAGGCTGCCTCATaGGGGCCCTTGTGGCATCAT +
Preference number: 4 (lower is better)
Translates to: SSQYSNVVSVAERVVSKVNEAAS*GPLWHH
Trigger: ATGATGCCACAAGGGCCCGCATGAGGCAGCCTCGTT...AACCTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR GCA 90 bp TTAAATACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCGCCACATCATCTGGGTaGAGCTTAAAGTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LNTEPGSPASAVAALFFLATSSG*SLKWGR
Trigger: CCGGCCCCACTTTAAGCTGCACCCAGATGATGTGGC...GAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGTATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp AGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCATCCAGTTCACTACTaGAAGGGTCTGGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: SPGTTVHPVVGNISGIAFHPVHY*KGLAWD
Trigger: GTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATG...AAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp ATTAATGCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCCATCCAGTTCACTACTaGAAGGGTCTGGCATGGGAC +
Preference number: 4 (lower is better)
Translates to: INAWGLTSIAHAEVPCHSHPVHY*KGLAWD
Trigger: GTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATG...GGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGCATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
CDS-3UTR GCA 90 bp GTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATGGTATCCAAGGTTATaGCCGTACCTGAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VSIVRGRQCIQLWEIFLGWYPRL*PYLREW
Trigger: CCACTCCCTCAGGTACGGGCATAACCTTGGATACCA...TCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGCTACGGTCTTGCGCCTaGTACAGCACCTGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: VSSQYSNVVSVAERVVSKLRSCA*YSTCKV
Trigger: AACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG...CTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp CCAAGATTGTGTCTGTGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTCTACGGTCTTGCGCCTaGTACAGCACCTGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: PRLCLWVSSQYSNVVSVALRSCA*YSTCKV
Trigger: AACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG...AGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCACAGACACAATCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCAGGGAGTCCAGCCTCTaGTGTTGCTGCTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSRESSL*CCCSFL
Trigger: AAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCT...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCATGCAAGTGCCTTCTCTaGTTCTCACCGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPCKCLL*FSPWVA
Trigger: TGCCACCCACGGTGAGAAGCAGAGAAGGCACTTGCA...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp GATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATACAGAGTCTTGCCTTTTaGCCAAAGGAGCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: DGVVSIVRGRQCIQLWEIQSLAF*PKEPGL
Trigger: AAGACCAGGCTCCTTTGGGCAAAAGGCAAGACTCTG...TATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR GCA 90 bp CGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCAAAAGCTGGCTTCTTaGTCCAAGGAGAGAGCATTG +
Preference number: 4 (lower is better)
Translates to: RSCACYSTCKVLLSRQVFQKLAS*SKERAL
Trigger: CAATGCTCTCTCCTTGGAGCAAGAAGCCAGCTTTTG...AAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp TTAAATACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCTCATGCGGGCCCTTGTaGCATCATCCAGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LNTEPGSPASAVAALFFLSCGPL*HHPADL
Trigger: CAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGA...GAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGTATTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR CCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTGCCCATCAAAAGTATTaGAACAGTACGAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGAHQKY*NSTSFG
Trigger: GCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGC...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CTTACCCTTAAAGAAGTGAATCCATTGTGTTCGAGGCGAGTAGACAGCAGCATCGCATGGCCCACTTCATaGGCTGCAATGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LTLKEVNPLCSRRVDSSIAWPTS*AAMMRR
Trigger: CCTGCGCATCATTGCAGCCCATGAAGTGGGCCATGC...GATGCTGCTGTCTACTCGCCTCGAACACAATGGATTCACTTCTTTAAGGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp AAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTTTACTGGCCCAAGCCCCAGAGCATaGCCCACTTCATGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: KHINVILKDSKALAQFTGPSPRA*PTSWAA
Trigger: TGCAGCCCATGAAGTGGGCCATGCTCTGGGGCTTGG...GCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCACCCTGCCACATCATCTaGGTGCAGCTTAAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPPCHII*VQLKVG
Trigger: CCCCACTTTAAGCTGCACCCAGATGATGTGGCAGGG...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCACTACTGCAAGGGTCTaGCATGGGACTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFTTARV*HGTGFC
Trigger: ACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGT...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp ATTAATGCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCACTACTGCAAGGGTCTaGCATGGGACTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: INAWGLTSIAHAEVPCHSTTARV*HGTGFC
Trigger: ACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGT...GGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGCATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
CDS-3UTR CCA 90 bp GTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGACTACTGCAAGGGTCTaGCATGGGACTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: VGNISGIAFLYSKLLVEATTARV*HGTGFC
Trigger: ACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGT...CGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTGTGGCTGAGAGAGTaGTATCCAAGGTTATGCCCG +
Preference number: 4 (lower is better)
Translates to: SPGTTVHPVVGNISGIAFLWLRE*YPRLCP
Trigger: CGGGCATAACCTTGGATACCACTCTCTCAGCCACAG...AAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAGCTCAAACGTGGTTTCTGTaGCTGAGAGAGTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: RGLVWHSRKQTLDWFGVAQTWFL*LREWYP
Trigger: TGGATACCACTCTCTCAGCCACAGAAACCACGTTTG...AGCTACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACGTCAGTATTCAAACGTaGTTTCTGTGGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GVGSVRGLRSTVLRLLQHVSIQT*FLWLRE
Trigger: CTCTCTCAGCCACAGAAACCACGTTTGAATACTGAC...GTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGCCAAGATTGTGTCTGTaGGTGAGCAGTCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQPRLCL*VSSQYS
Trigger: TGAATACTGACTGCTCACCCACAGACACAATCTTGG...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGGGGAAATGAAAGGGTaGGTGGTGGAGCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SASSCGKYFWDSLSLLEAGEMKG*VVEPQG
Trigger: CCCCTGAGGCTCCACCACCCACCCTTTCATTTCCCC...AGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAAAATGCACAGGAAAGTaGTGGCTGGAGTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVKCTGK*WLELEV
Trigger: CACTTCCAACTCCAGCCACCACTTTCCTGTGCATTT...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCAGACATATCCCTCCCCTaGGCAGCAAGGCTACAATGG +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPDISLP*AARLQW
Trigger: CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTC...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCGAGCACTGTCTTCCATaGGGCTTCCACTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFEHCLP*GFHFSP
Trigger: AGGAGAGAAGTGGAAGCCCCATGGAAGACAGTGCTC...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR CAA 72 bp GCGCCACACCTTGTCTCCCTTAAAGAAGTGAATCCATaGTGTTCGAGGCGAGTAGACAGCAGCATCCAGGTT +
Preference number: 4 (lower is better)
Translates to: APHLVSLKEVNP*CSRRVDSSIQV
Trigger: AACCTGGATGCTGCTGTCTACTCGCCTCGAACACAATGGATTCACTTCTTTAAGGGAGACAAGGTGTGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
3UTR CAA 72 bp ATCACTGGACTCTTCTTGCCAGGCCCATCAAAAGTATaGGAACAGTACGAGCTTTGGCGGCCATGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: ITGLFLPGPSKV*EQYELWRPWKE
Trigger: CTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGCAAGAAGAGTCCAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR TCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCAGTGGCATCATCCAGCTaGCCTGAGACTGGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPVASSS*PETGSS
Trigger: TGAACTTCCAGTCTCAGGTCAGCTGGATGATGCCAC...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR TCA 90 bp TATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCACACATAGTCCCCCTTaGAAGCATAGGTCTTCCCAC +
Preference number: 4 (lower is better)
Translates to: YSPGTTVHPVVGNISGIATHSPP*KHRSSH
Trigger: GTGGGAAGACCTATGCTTTCAAGGGGGACTATGTGT...GGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCAGTAGACTTTGCCCTTaGAGAAGTAGACTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSSRLCP*RSRLGH
Trigger: ATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACT...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTCACCGCACCTCGTCTTaGAATAGCCTTTTAAATGTT +
Preference number: 4 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGHRTSS*NSLLNV
Trigger: AACATTTAAAAGGCTATTTCAAGACGAGGTGCGGTG...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp CTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAAGCCCCTTAAAGAAGTaGATCCATTGTGTTCGAGGC +
Preference number: 4 (lower is better)
Translates to: LYSKLLVEAPVDFALEEVSPLKK*IHCVRG
Trigger: GCCTCGAACACAATGGATTCACTTCTTTAAGGGGCT...TACTTCTTCAAGGGCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409200.7
CDS-3UTR GCA 90 bp TTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCCCCGCCCACTTCATGGGCTaGAATGATGCGCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: FLCTPKQRANHLDKSSVPAHFMG*NDAQVH
Trigger: GTGAACCTGCGCATCATTGCAGCCCATGAAGTGGGC...GGGGACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp AAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTTTACTGGCTGGGAATATCGGGAGTaGCCAAGCCCCAGAGCATGG +
Preference number: 4 (lower is better)
Translates to: KHINVILKDSKALAQFTGWEYRE*PSPRAW
Trigger: CCATGCTCTGGGGCTTGGGCACTCCCGATATTCCCA...GCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCTCACTGGACTCTTCTTaGCATAGAGAGCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFSLDSS*HREPGS
Trigger: GGATCCAGGCTCTCTATGGCAAGAAGAGTCCAGTGA...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp GTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTCCGGGGACGACAGTaGATCCAGTTGTGGGAAATA +
Preference number: 4 (lower is better)
Translates to: VSSQYSNVVSVAERVVSKVRGRQ*IQLWEI
Trigger: TATTTCCCACAACTGGATGCACTGTCGTCCCCGGAC...CTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp ACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAGGAAATGGTATCCAAGGTTATaGCCGTACCTGAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TSREEMTQLEGLSKTDRKWYPRL*PYLREW
Trigger: CCACTCCCTCAGGTACGGGCATAACCTTGGATACCA...TTTCCTGTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCCCCCTACGGTCTTGCGCCTaGTACAGCACCTGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: FLCTPKQRANHLDKSSVPLRSCA*YSTCKV
Trigger: AACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG...GGGGACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp CAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGTCAGTTTACTGGCCATaGTGTTTTCTTGCATTTTAT +
Preference number: 4 (lower is better)
Translates to: QFTTARVWHGTGFCGHWGSVYWP*CFLAFY
Trigger: ATAAAATGCAAGAAAACAGCATGGCCAGTAAACTGA...CCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTTCCTGGTTTCCCAGATaGATAAAGGAAGACATATCC +
Preference number: 4 (lower is better)
Translates to: STVLRLLQHLQGSTEQTGSWFPR*IKEDIS
Trigger: GGATATGTCTTCCTTTATGCATCTGGGAAACCAGGA...ACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCACCTGGTCTTCAGGGCTaGATAGGATGCAAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPPGLQG*IGCKCL
Trigger: AAGGCACTTGCATCCTATGCAGCCCTGAAGACCAGG...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp CTCTTCTTCTTCCTCATCCCTTATCACTGGACTCTTCTTGCCAGGCCCATCAAAATGCGGAAAGTCAGGTaGTTCTTTCTCCAGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LFFFLIPYHWTLLARPIKMRKVR*FFLQRP
Trigger: AGGCCGCTGGAGAAAGAAGCACCTGACTTTCCGCAT...TTTGATGGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAGGAAGAAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGTATTTAAGGGTCTTCTaGTTGAAGGGATCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQYLRVF*LKGSSR
Trigger: CCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATA...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTATTTAAGGGTCTTCTaGTTGAAGGGATCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGYLRVF*LKGSSR
Trigger: CCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATA...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTTTACTGGCGAGCTTTGGCGGCCATaGAAGGAGAGGCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: KHINVILKDSKALAQFTGELWRP*KERRMS
Trigger: TGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTC...GCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR CCA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAACTCATCCCTTATCACTaGACTCTTCTTGCCATAGAG +
Preference number: 4 (lower is better)
Translates to: PRHLPPPLTSREEMTQLELIPYH*TLLAIE
Trigger: CTCTATGGCAAGAAGAGTCCAGTGATAAGGGATGAG...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGAAACAAACCCTTGATTaGTTTGGGGTAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQKQTLD*FGVAAE
Trigger: TTCAGCAGCTACCCCAAACCAATCAAGGGTTTGTTT...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTAAATACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCATAGCAGCCGAGGGCTaGTTTGGCACTCCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: LNTEPGSPASAVAALFFLIAAEG*FGTPVN
Trigger: GTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTAT...GAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGTATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp ACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAGGAAACTGTGGCTGAGAGAGTaGTATCCAAGGTTATGCCCG +
Preference number: 4 (lower is better)
Translates to: TSREEMTQLEGLSKTDRKLWLRE*YPRLCP
Trigger: CGGGCATAACCTTGGATACCACTCTCTCAGCCACAG...TTTCCTGTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp ACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCTGCACCGTCAGTATTCAAACGTaGTTTCTGTGGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: TEPGSPASAVAALFFLCTVSIQT*FLWLRE
Trigger: CTCTCTCAGCCACAGAAACCACGTTTGAATACTGAC...GGTGCAGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp CGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCCTTGCTCAGTTTACTaGCCATGCTGTTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: RSCACYSTCKVLLSRQVFPCSVY*PCCFLA
Trigger: TGCAAGAAAACAGCATGGCCAGTAAACTGAGCAAGG...AAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCACTCTGCTTCTCACCGTaGGTGGCACTAATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPLCFSP*VALISS
Trigger: GGAGGAAATTAGTGCCACCCACGGTGAGAAGCAGAG...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp ACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCTGCACCTCATTAGGGGGTAGTTaGGTTTCTGTTTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: TEPGSPASAVAALFFLCTSLGGS*VSVWPF
Trigger: GAAAGGCCAAACAGAAACCCAACTACCCCCTAATGA...GGTGCAGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAGTAGACTTTGCCCTTaGAGAAGTAGACTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDSRLCP*RSRLGH
Trigger: ATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACT...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATAGTGGTATTCCCACCTaGTGGGGTAGTGTCTATAGT +
Preference number: 4 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHSGIPT*WGSVYS
Trigger: ACTATAGACACTACCCCATCAGGTGGGAATACCACT...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAATGGCATTAAATACTaGACCAGGGAGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDNGIKY*TRESSL
Trigger: GAGGCTGGACTCCCTGGTTCAGTATTTAATGCCATT...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp TTCTTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCTGGGAAGAAGGGCTCTaGGGAGCTCCAAGATACCCC +
Preference number: 4 (lower is better)
Translates to: FFLCTPKQRANHLDKSSVWEEGL*GAPRYP
Trigger: GGGGTATCTTGGAGCTCCTCAGAGCCCTTCTTCCCA...GACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp CCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGCACCGCACCTCGTCTTaGAATAGCCTTTTAAATGTT +
Preference number: 4 (lower is better)
Translates to: PRCIKEDISLPWAARLQWHRTSS*NSLLNV
Trigger: AACATTTAAAAGGCTATTTCAAGACGAGGTGCGGTG...CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp CTTACCCTTAAAGAAGTGAATCCATTGTGTTCGAGGCGAGTAGACAGCAGCATCCTCCATTGCTCATGCTaGAGTCCCATGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: LTLKEVNPLCSRRVDSSILHCSC*SPMSLP
Trigger: TGGGAGTGACATGGGACTTCAGCATGAGCAATGGAG...GATGCTGCTGTCTACTCGCCTCGAACACAATGGATTCACTTCTTTAAGGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR TCA 90 bp TGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCTCTCCTGAGAGCATGTaGGGAAAGAACAAGTCACCT +
Preference number: 4 (lower is better)
Translates to: WVSSQYSNVVSVAERVVSSPESM*GKNKSP
Trigger: AGGTGACTTGTTCTTTCCTCACATGCTCTCAGGAGA...GGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR GCA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGATGTTCACCTCAGCTTaGCTCACAGTGGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGMFTSA*LTVVKI
Trigger: TATTTTTACCACTGTGAGGCAAGCTGAGGTGAACAT...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp ATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGTGCCAGGTCAGGATCAGCAGGCTaGCCCCACCGCCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: MNMELAFIKHKCTRHCARSGSAG*PHRLPT
Trigger: TGTTGGCAGGCGGTGGGGGCAGCCTGCTGATCCTGA...CCTGGCACAGTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp CCCAGGCATCTCCCTCCACCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAAAAGAGGACTCAGAATaGTTTGTTGCTCAGAGCGTT +
Preference number: 4 (lower is better)
Translates to: PRHLPPPLTSREEMTQLEKEDSE*FVAQSV
Trigger: AACGCTCTGAGCAACAAAGCATTCTGAGTCCTCTTT...TTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATGCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp GTATTCCCACCTGATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGCTCGGTGATATCTTCTaGCTTGAAGTTATTAGATCC +
Preference number: 4 (lower is better)
Translates to: VFPPDGVVSIVRGRQCIQLGDIF*LEVIRS
Trigger: GGATCTAATAACTTCAAGCCAGAAGATATCACCGAG...CTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATCAGGTGGGAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTCTTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCGAGCTTTGGCGGCCATaGAAGGAGAGGCGGATGTCA +
Preference number: 4 (lower is better)
Translates to: FFLCTPKQRANHLDKSSVELWRP*KERRMS
Trigger: TGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTC...GACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR CCA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGCCCATCAAAAGTATTaGAACAGTACGAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVAHQKY*NSTSFG
Trigger: GCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGC...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTCTTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCGCATGGCCCACTTCATaGGCTGCAATGATGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FFLCTPKQRANHLDKSSVAWPTS*AAMMRR
Trigger: CCTGCGCATCATTGCAGCCCATGAAGTGGGCCATGC...GACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp AGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTTCTGTGGCTGAGAGAGTaGTATCCAAGGTTATGCCCG +
Preference number: 4 (lower is better)
Translates to: SSQYSNVVSVAERVVSKVLWLRE*YPRLCP
Trigger: CGGGCATAACCTTGGATACCACTCTCTCAGCCACAG...AACCTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCGTCAGTATTCAAACGTaGTTTCTGTGGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSVSIQT*FLWLRE
Trigger: CTCTCTCAGCCACAGAAACCACGTTTGAATACTGAC...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCCCTTGCTCAGTTTACTaGCCATGCTGTTTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSPCSVY*PCCFLA
Trigger: TGCAAGAAAACAGCATGGCCAGTAAACTGAGCAAGG...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp AGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTTATCATCCAGCTGACCTaGGACTGGAAGTTCAGATGC +
Preference number: 4 (lower is better)
Translates to: SSQYSNVVSVAERVVSKVIIQLT*DWKFRC
Trigger: GCATCTGAACTTCCAGTCTCAGGTCAGCTGGATGAT...AACCTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409200.7
CDS-3UTR TCA 90 bp AGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTTCTCCCTTAAAGAAGTaGATCCATTGTGTTCGAGGC +
Preference number: 4 (lower is better)
Translates to: SPGTTVHPVVGNISGIAFSPLKK*IHCVRG
Trigger: GCCTCGAACACAATGGATTCACTTCTTTAAGGGAGA...AAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR TCA 90 bp GAGAGGCCAATAGAGAGCTGCATCCAGGTTAGGTTCTACCCTATTCAGCTTCTTAGTAGACTTTGCCCTTaGAGAAGTAGACTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: ERPIESCIQVRFYPIQLLSRLCP*RSRLGH
Trigger: ATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACT...AAGAAGCTGAATAGGGTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp ATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGAGGGAGGGTGCAAATGGGGAATCTaGGATTCAACAAGGTTAATT +
Preference number: 4 (lower is better)
Translates to: IKEDISLPWAARLQWEGGCKWGI*DSTRLI
Trigger: AATTAACCTTGTTGAATCTCAGATTCCCCATTTGCA...CCCTCCCTCCCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp GAGAGGCCAATAGAGAGCTGCATCCAGGTTAGGTTCTACCCTATTCAGCTTCTTATGTACCAGACACTGTaGCAGGCACTTCACATACAG +
Preference number: 4 (lower is better)
Translates to: ERPIESCIQVRFYPIQLLMYQTL*QALHIQ
Trigger: CTGTATGTGAAGTGCCTGGCACAGTGTCTGGTACAT...AAGAAGCTGAATAGGGTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCCCCAGGGAGTCCAGCCTCTaGTGTTGCTGCTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FLCTPKQRANHLDKSSVPRESSL*CCCSFL
Trigger: AAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCT...GGGGACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp ATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTCGGTGATATCTTCTaGCTTGAAGTTATTAGATCC +
Preference number: 4 (lower is better)
Translates to: ILPTHSSRGLVWHSRKQTLGDIF*LEVIRS
Trigger: GGATCTAATAACTTCAAGCCAGAAGATATCACCGAG...GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CGTAATCATAAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGGAACAGTACGAGCTTTaGCGGCCATGGAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RNHKHINVILKDSKALAQEQYEL*RPWKER
Trigger: CCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTC...CTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTTATGATTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR CCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCGCCCATCAAAAGTATTaGAACAGTACGAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFAHQKY*NSTSFG
Trigger: GCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGC...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATCTCATCCCTTATCACTaGACTCTTCTTGCCATAGAG +
Preference number: 4 (lower is better)
Translates to: SCACYSTCKVLLSRQVFHLIPYH*TLLAIE
Trigger: CTCTATGGCAAGAAGAGTCCAGTGATAAGGGATGAG...ATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTACTACTGCAAGGGTCTaGCATGGGACTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SASSCGKYFWDSLSLLEATTARV*HGTGFC
Trigger: ACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGT...AGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGAAACAAACCCTTGATTaGTTTGGGGTAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVKQTLD*FGVAAE
Trigger: TTCAGCAGCTACCCCAAACCAATCAAGGGTTTGTTT...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTTGTGGGAAATATTTCTaGGATAGCCTTTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: RSCACYSTCKVLLSRQVFCGKYF*DSLSLL
Trigger: GAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACA...AAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCGTCAGTATTCAAACGTaGTTTCTGTGGCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: WVSSQYSNVVSVAERVVSVSIQT*FLWLRE
Trigger: CTCTCTCAGCCACAGAAACCACGTTTGAATACTGAC...GGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAAGACAGACAGGAAATaGAGTTGGGGGCCAAATCTA +
Preference number: 4 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDKTDRK*SWGPNL
Trigger: TAGATTTGGCCCCCAACTCCATTTCCTGTCTGTCTT...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GCACCCTCTCTAACAGGCAATCTGGGTAATATAGTTTTCTCCATCTTGCTGCATCCTCACCCAGCATCATaGCATCCAGTTCACTACTGC +
Preference number: 4 (lower is better)
Translates to: APSLTGNLGNIVFSILLHPHPAS*HPVHYC
Trigger: GCAGTAGTGAACTGGATGCCATGATGCTGGGTGAGG...ATGCAGCAAGATGGAGAAAACTATATTACCCAGATTGCCTGTTAGAGAGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
CDS-3UTR CCA 90 bp GGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCAGAGCGTTTCAGCTTTaGTCCACTCAACAAAACAAA +
Preference number: 4 (lower is better)
Translates to: GLFLVSQMHKGRHIPPLGRAFQL*STQQNK
Trigger: TTTGTTTTGTTGAGTGGACCAAAGCTGAAACGCTCT...GCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp TTAAATACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCTCAGGTGATAGCTTTTaGTCTCCTCCGGTCCACCTA +
Preference number: 4 (lower is better)
Translates to: LNTEPGSPASAVAALFFLSGDSF*SPPVHL
Trigger: TAGGTGGACCGGAGGAGACCAAAAGCTATCACCTGA...GAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGTATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR TCA 90 bp ACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAGGAAATCTCCCTTAAAGAAGTaGATCCATTGTGTTCGAGGC +
Preference number: 4 (lower is better)
Translates to: TSREEMTQLEGLSKTDRKSPLKK*IHCVRG
Trigger: GCCTCGAACACAATGGATTCACTTCTTTAAGGGAGA...TTTCCTGTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR TCA 90 bp CCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTAGTAGACTTTGCCCTTaGAGAAGTAGACTCGGCCAT +
Preference number: 4 (lower is better)
Translates to: PVVGNISGIAFLYSKLLVSRLCP*RSRLGH
Trigger: ATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACT...AACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CGTAATCATAAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGCGTGGTTTCTGTGGCTaGGAGAGTGGTATCCAAGGT +
Preference number: 4 (lower is better)
Translates to: RNHKHINVILKDSKALAQRGFCG*ESGIQG
Trigger: ACCTTGGATACCACTCTCTCAGCCACAGAAACCACG...CTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTTATGATTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAGCTTCCAAGGCATTTaGTACCTTTTTGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDSFQGI*YLFDGK
Trigger: CTTCCCATCAAAAAGGTATCAAATGCCTTGGAAGCT...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp ATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGTGCCAGGAACGAGGCTGCCTCATaGGGGCCCTTGTGGCATCAT +
Preference number: 4 (lower is better)
Translates to: MNMELAFIKHKCTRHCARNEAAS*GPLWHH
Trigger: ATGATGCCACAAGGGCCCGCATGAGGCAGCCTCGTT...CCTGGCACAGTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR GCA 90 bp TTCTTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCTGGTATCCAAGGTTATaGCCGTACCTGAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: FFLCTPKQRANHLDKSSVWYPRL*PYLREW
Trigger: CCACTCCCTCAGGTACGGGCATAACCTTGGATACCA...GACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp TTAAATACTGAACCAGGGAGTCCAGCCTCTGCTGTTGCTGCTCTTTTCTTTCTCTCCAGCCTCTGCTGTTaGTGCTCTTTTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LNTEPGSPASAVAALFFLSSLCC*CSFLSL
Trigger: CAGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGA...GAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGACTCCCTGGTTCAGTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAGAAGGGATTTGCCCTTaGTTTGAACTTTATACCTTA +
Preference number: 4 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVEGICP*FELYTL
Trigger: TAAGGTATAAAGTTCAAAGCAAGGGCAAATCCCTTC...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGCTCGGTGATATCTTCTaGCTTGAAGTTATTAGATCC +
Preference number: 4 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVLGDIF*LEVIRS
Trigger: GGATCTAATAACTTCAAGCCAGAAGATATCACCGAG...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCCTCGGTGATATCTTCTaGCTTGAAGTTATTAGATCC +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSLGDIF*LEVIRS
Trigger: GGATCTAATAACTTCAAGCCAGAAGATATCACCGAG...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCTATTTAAGGGTCTTCTaGTTGAAGGGATCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFYLRVF*LKGSSR
Trigger: CCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATA...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CTCTTCTTCTTCCTCATCCCTTATCACTGGACTCTTCTTGCCAGGCCCATCAAAGCCCATCAAAAGTATTaGAACAGTACGAGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LFFFLIPYHWTLLARPIKAHQKY*NSTSFG
Trigger: GCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGC...TTTGATGGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAGGAAGAAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CCA 90 bp TTTTCTCCATCTTGCTGCATTTCCAGATGTGTTCTAGTGGCCCTTAGAGCGTGGCTCATCCCTTATCACTaGACTCTTCTTGCCATAGAG +
Preference number: 4 (lower is better)
Translates to: FSPSCCISRCVLVALRAWLIPYH*TLLAIE
Trigger: CTCTATGGCAAGAAGAGTCCAGTGATAAGGGATGAG...CCACGCTCTAAGGGCCACTAGAACACATCTGGAAATGCAGCAAGATGGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp TATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCAAACAAACCCTTGATTaGTTTGGGGTAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: YSPGTTVHPVVGNISGIAKQTLD*FGVAAE
Trigger: TTCAGCAGCTACCCCAAACCAATCAAGGGTTTGTTT...GGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAACAAACCCTTGATTaGTTTGGGGTAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: WVSSQYSNVVSVAERVVSKQTLD*FGVAAE
Trigger: TTCAGCAGCTACCCCAAACCAATCAAGGGTTTGTTT...GGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTCAAACGTGGTTTCTGTaGCTGAGAGAGTGGTATCCA +
Preference number: 4 (lower is better)
Translates to: PVVGNISGIAFLYSKLLVQTWFL*LREWYP
Trigger: TGGATACCACTCTCTCAGCCACAGAAACCACGTTTG...AACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCACCAAGATTGTGTCTGTaGGTGAGCAGTCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPPRLCL*VSSQYS
Trigger: TGAATACTGACTGCTCACCCACAGACACAATCTTGG...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp GTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGCCAAGATTGTGTCTGTaGGTGAGCAGTCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: VSSQYSNVVSVAERVVSKPRLCL*VSSQYS
Trigger: TGAATACTGACTGCTCACCCACAGACACAATCTTGG...CTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCATCATTAGGGGGTAGTTaGGTTTCTGTTTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: FSPWVALISSLTRTLFQPSLGGS*VSVWPF
Trigger: GAAAGGCCAAACAGAAACCCAACTACCCCCTAATGA...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
3UTR CAA 72 bp GTAACTAGCCTCCTTACCCTTAAAGAAGTGAATCCATaGTGTTCGAGGCGAGTAGACAGCAGCATCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VTSLLTLKEVNP*CSRRVDSSIQV
Trigger: AACCTGGATGCTGCTGTCTACTCGCCTCGAACACAATGGATTCACTTCTTTAAGGGTAAGGAGGCTAGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR TCA 90 bp AAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTTTACTGGCAATGGCATTAAATACTaGACCAGGGAGTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KHINVILKDSKALAQFTGNGIKY*TRESSL
Trigger: GAGGCTGGACTCCCTGGTTCAGTATTTAATGCCATT...GCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp GTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGTTACCCTTAAAGAAGTaGATCCATTGTGTTCGAGGC +
Preference number: 4 (lower is better)
Translates to: VSSQYSNVVSVAERVVSKLPLKK*IHCVRG
Trigger: GCCTCGAACACAATGGATTCACTTCTTTAAGGGTAA...CTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR GCA 90 bp TTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCCCCGACTGGAAGTTCAGATaGTTCCTGAAAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: FLCTPKQRANHLDKSSVPDWKFR*FLKSSQ
Trigger: CTGAGAGCTTTTCAGGAAGCATCTGAACTTCCAGTC...GGGGACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR GCA 90 bp CCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGACTGGAAGTTCAGATaGTTCCTGAAAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PVVGNISGIAFLYSKLLVDWKFR*FLKSSQ
Trigger: CTGAGAGCTTTTCAGGAAGCATCTGAACTTCCAGTC...AACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409200.7
CDS-3UTR GCA 90 bp AGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTATGTTCACCTCAGCTTaGCTCACAGTGGTAAAAATA +
Preference number: 4 (lower is better)
Translates to: SPGTTVHPVVGNISGIAFMFTSA*LTVVKI
Trigger: TATTTTTACCACTGTGAGGCAAGCTGAGGTGAACAT...AAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CCA 90 bp AGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCGGTGATATCTTCTaGCTTGAAGTTATTAGATCC +
Preference number: 4 (lower is better)
Translates to: SPGTTVHPVVGNISGIAFLGDIF*LEVIRS
Trigger: GGATCTAATAACTTCAAGCCAGAAGATATCACCGAG...AAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp CCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTCTCATCCCTTATCACTaGACTCTTCTTGCCATAGAG +
Preference number: 4 (lower is better)
Translates to: PVVGNISGIAFLYSKLLVLIPYH*TLLAIE
Trigger: CTCTATGGCAAGAAGAGTCCAGTGATAAGGGATGAG...AACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTTGTGGGAAATATTTCTaGGATAGCCTTTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: SPGTTVHPVVGNISGIAFCGKYF*DSLSLL
Trigger: GAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACA...AAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGAGGCGTGTGGGAAATATTTCTaGGATAGCCTTTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: VGNISGIAFLYSKLLVEACGKYF*DSLSLL
Trigger: GAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACA...CGCCTCAACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp AGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTTCCAAGATTGTGTCTGTaGGTGAGCAGTCAGTATTCA +
Preference number: 4 (lower is better)
Translates to: SSQYSNVVSVAERVVSKVPRLCL*VSSQYS
Trigger: TGAATACTGACTGCTCACCCACAGACACAATCTTGG...AACCTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp AAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTTTACTGGCCCTGCAAGGTTCTACTaGGCAGACAGGTATTTCATT +
Preference number: 4 (lower is better)
Translates to: KHINVILKDSKALAQFTGPARFY*ADRYFI
Trigger: AATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGG...GCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp CCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTCATAGCTGCAAATGGGGAATCTaGGATTCAACAAGGTTAATT +
Preference number: 4 (lower is better)
Translates to: PVDFALEEVDSAILPTHSCKWGI*DSTRLI
Trigger: AATTAACCTTGTTGAATCTCAGATTCCCCATTTGCA...GCTATGAGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TCCTCTCTTATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTCAGCCGCACCAGCCTaGACCTCTTGGAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SSLMNMELAFIKHKCTRHSAAPA*TSWKVK
Trigger: CTTGACCTTCCAAGAGGTGCAGGCTGGTGCGGCTGA...GTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCATAAGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR GCA 90 bp TCCTCTCTTATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACGCCACATCATCTGGGTaGAGCTTAAAGTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SSLMNMELAFIKHKCTRHATSSG*SLKWGR
Trigger: CCGGCCCCACTTTAAGCTGCACCCAGATGATGTGGC...GTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCATAAGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCTCAGTTTACTGGCCATaGTGTTTTCTTGCATTTTAT +
Preference number: 4 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSSVYWP*CFLAFY
Trigger: ATAAAATGCAAGAAAACAGCATGGCCAGTAAACTGA...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp ATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGTGCCAGGGGAACACCTTTTGGTTaGGAGGCCAATAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: MNMELAFIKHKCTRHCARGTPFG*EANREL
Trigger: CAGCTCTCTATTGGCCTCTCAACCAAAAGGTGTTCC...CCTGGCACAGTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR TCA 90 bp TCCTCTCTTATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACGAAGTGTTAGAGGCCTaGGATCTACGGTCTTGCGCC +
Preference number: 4 (lower is better)
Translates to: SSLMNMELAFIKHKCTRHEVLEA*DLRSCA
Trigger: GGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTC...GTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCATAAGAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR TCA 90 bp AAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTTTACTGGCAGCTTCCAAGGCATTTaGTACCTTTTTGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: KHINVILKDSKALAQFTGSFQGI*YLFDGK
Trigger: CTTCCCATCAAAAAGGTATCAAATGCCTTGGAAGCT...GCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR GCA 90 bp ATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGTGCCAGGTCACTGGACTCTTCTTaGCATAGAGAGCCTGGATCC +
Preference number: 4 (lower is better)
Translates to: MNMELAFIKHKCTRHCARSLDSS*HREPGS
Trigger: GGATCCAGGCTCTCTATGGCAAGAAGAGTCCAGTGA...CCTGGCACAGTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp AGTGCATCCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTTCCTGGTTTCCCAGATaGATAAAGGAAGACATATCC +
Preference number: 4 (lower is better)
Translates to: SASSCGKYFWDSLSLLEASWFPR*IKEDIS
Trigger: GGATATGTCTTCCTTTATGCATCTGGGAAACCAGGA...AGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGGATGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR GCA 90 bp ATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGTGCCAGGCAGAGTCTTGCCTTTTaGCCAAAGGAGCCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: MNMELAFIKHKCTRHCARQSLAF*PKEPGL
Trigger: AAGACCAGGCTCCTTTGGGCAAAAGGCAAGACTCTG...CCTGGCACAGTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp AAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTTTACTGGCAAACAAACCCTTGATTaGTTTGGGGTAGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KHINVILKDSKALAQFTGKQTLD*FGVAAE
Trigger: TTCAGCAGCTACCCCAAACCAATCAAGGGTTTGTTT...GCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp ACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAGGAAATCAGTTTACTGGCCATaGTGTTTTCTTGCATTTTAT +
Preference number: 4 (lower is better)
Translates to: TSREEMTQLEGLSKTDRKSVYWP*CFLAFY
Trigger: ATAAAATGCAAGAAAACAGCATGGCCAGTAAACTGA...TTTCCTGTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp GCACCCTCTCTAACAGGCAATCTGGGTAATATAGTTTTCTCCATCTTGCTGCATCTCGGTGATATCTTCTaGCTTGAAGTTATTAGATCC +
Preference number: 4 (lower is better)
Translates to: APSLTGNLGNIVFSILLHLGDIF*LEVIRS
Trigger: GGATCTAATAACTTCAAGCCAGAAGATATCACCGAG...ATGCAGCAAGATGGAGAAAACTATATTACCCAGATTGCCTGTTAGAGAGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
CDS-3UTR TCA 90 bp ATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGTGCCAGGCCTGCAAGGTTCTACTaGGCAGACAGGTATTTCATT +
Preference number: 4 (lower is better)
Translates to: MNMELAFIKHKCTRHCARPARFY*ADRYFI
Trigger: AATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGG...CCTGGCACAGTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CCA 90 bp ATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGTGCCAGGAAGACAGACAGGAAATaGAGTTGGGGGCCAAATCTA +
Preference number: 4 (lower is better)
Translates to: MNMELAFIKHKCTRHCARKTDRK*SWGPNL
Trigger: TAGATTTGGCCCCCAACTCCATTTCCTGTCTGTCTT...CCTGGCACAGTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR GCA 90 bp TCCTCTCTTATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACAGGCCAATAGAGAGCTaGATCCAGGTTAGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: SSLMNMELAFIKHKCTRHRPIES*IQVRFY
Trigger: GTAGAACCTAACCTGGATGCAGCTCTCTATTGGCCT...GTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCATAAGAGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CCA 90 bp TCCTCTCTTATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACAAGACAGACAGGAAATaGAGTTGGGGGCCAAATCTA +
Preference number: 4 (lower is better)
Translates to: SSLMNMELAFIKHKCTRHKTDRK*SWGPNL
Trigger: TAGATTTGGCCCCCAACTCCATTTCCTGTCTGTCTT...GTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCATAAGAGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS TCA 90 bp GGTCCCACCAGACGAGAGCTCCAGAGGCTGTCCGTGCCTCTGACCTaGGATTTCTGGGAGCCTTGGGGGAGCAGTGCTAGGCAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GPTRRELQRLSVPLT*DFWEPWGSSARQRG
Trigger: GCCCCTCTGCCTAGCACTGCTCCCCCAAGGCTCCCAGAAATCTCAGGTCAGAGGCACGGACAGCCTCTGGAGCTCTCGTCTGGTGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS CCA 90 bp CGGCCTGAGACTGTCATGGGGAGTAGGAAGCCCAGCCACAGCTGCTaGCAGTTCATGGTCCCACCAGACGAGAGCTCCAGAGGCTGTCCG +
Preference number: 5 (lower is better)
Translates to: RPETVMGSRKPSHSC*QFMVPPDESSRGCP
Trigger: CGGACAGCCTCTGGAGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGGCTTCCTACTCCCCATGACAGTCTCAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS GCA 90 bp ACCCGGCCTGAGACTGTCATGGGGAGTAGGAAGCCCAGCCACAGCTaGTGGCAGTTCATGGTCCCACCAGACGAGAGCTCCAGAGGCTGT +
Preference number: 5 (lower is better)
Translates to: TRPETVMGSRKPSHS*WQFMVPPDESSRGC
Trigger: ACAGCCTCTGGAGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGGCTTCCTACTCCCCATGACAGTCTCAGGCCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS GCA 90 bp GGTAGGTCCCCTCAGTCCAGAACTCGTCTTCGTCGAAGTGCACACTaGCCAGCTCTGGGATGTCGGCATGGGCCAGGACTCTCCCTGGAC +
Preference number: 5 (lower is better)
Translates to: GRSPQSRTRLRRSAH*PALGCRHGPGLSLD
Trigger: GTCCAGGGAGAGTCCTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGAGTTCTGGACTGAGGGGACCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547685.5
CDS CCA 90 bp CTGTCATGGGGAGTAGGAAGCCCAGCCACAGCTGCTGGCAGTTCATaGTCCCACCAGACGAGAGCTCCAGAGGCTGTCCGTGCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LSWGVGSPATAAGSS*SHQTRAPEAVRASD
Trigger: GTCAGAGGCACGGACAGCCTCTGGAGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGGCTTCCTACTCCCCATGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS-3UTR CAA 90 bp GGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCCAGTCCTGGAAGGCTaGACGCAGGGCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: GVGSVRGLRSTVLRLLQHPVLEG*TQGCPG
Trigger: GCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTGG...GTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS GCA 90 bp GGTAGGTCCCCTCAGTCCAGAACTCGTCTTCGTCGAAGTGCACACTaGCCAGCTCTGGGATGTCGGCATGGGCCAGGACTCTCCCTCAGA +
Preference number: 5 (lower is better)
Translates to: GRSPQSRTRLRRSAH*PALGCRHGPGLSLR
Trigger: TCTGAGGGAGAGTCCTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGAGTTCTGGACTGAGGGGACCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CAA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACACCAGTCCTGGAAGGCTaGACGCAGGGCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTPVLEG*TQGCPG
Trigger: GCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTGG...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp AGACAGCAGCATCCAGGTTTCCGGGGAGCCCCTCCCAAAGGGCAGACACTCGGAGTCAAGGGAGCCACATaGCTCCAGTCCTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: RQQHPGFRGAPPKGQTLGVKGAT*LQSWKA
Trigger: AGCCTTCCAGGACTGGAGCAATGTGGCTCCCTTGAC...TCCGAGTGTCTGCCCTTTGGGAGGGGCTCCCCGGAAACCTGGATGCTGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS TCA 90 bp TTCATGGTCCCACCAGACGAGAGCTCCAGAGGCTGTCCGTGCCTCTaGCCTGAGATTTCTGGGAGCCTTGGGGGAGCAGTGCTAGGCAGA +
Preference number: 5 (lower is better)
Translates to: FMVPPDESSRGCPCL*PEISGSLGGAVLGR
Trigger: TCTGCCTAGCACTGCTCCCCCAAGGCTCCCAGAAATCTCAGGTCAGAGGCACGGACAGCCTCTGGAGCTCTCGTCTGGTGGGACCATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS-3UTR CAA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGGCCTCATGCGGGCCCTaGTGGCATCATCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGEASCGP*WHHPAD
Trigger: GTCAGCTGGATGATGCCACAAGGGCCCGCATGAGGC...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCAAGGTTATGCCCGTACCTGCCAGTCCTGGAAGGCTaGACGCAGGGCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: QTWFLWLREWYPRLCPYLPVLEG*TQGCPG
Trigger: GCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTGG...CAGGTACGGGCATAACCTTGGATACCACTCTCTCAGCCACAGAAACCACGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CAA 90 bp TCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCACAGGAACAGTACGAGCTTaGGCGGCCATGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SLLQGSGMGLGSVGTGGTGTVRA*AAMEGE
Trigger: CTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCC...TGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000552763.1
ENST00000552872.5
CDS CCA 90 bp AGGGATCCTCTAGGCCACAACGAGGCTGCCTCATGCGGGCCCTTGTaGCATCATCCAGCTGACCTGAGACTCAGAGCCTCGGTGATATCT +
Preference number: 5 (lower is better)
Translates to: RDPLGHNEAASCGPL*HHPADLRLRASVIS
Trigger: AGATATCACCGAGGCTCTGAGTCTCAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGAGGCAGCCTCGTTGTGGCCTAGAGGATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS CCA 90 bp CTCAGTCCAGAACTCGTCTTCGTCGAAGTGCACACTGCCCAGCTCTaGGATGTCGGCATGGGCCAGGACTCTCCCTGGACAAAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LSPELVFVEVHTAQL*DVGMGQDSPWTKAK
Trigger: CTTTGCCTTTGTCCAGGGAGAGTCCTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGAGTTCTGGACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547685.5
CDS-3UTR CAA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCCCAGTCCTGGAAGGCTaGACGCAGGGCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFPVLEG*TQGCPG
Trigger: GCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTGG...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp ATTAATGCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCCCAGTCCTGGAAGGCTaGACGCAGGGCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: INAWGLTSIAHAEVPCHSPVLEG*TQGCPG
Trigger: GCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTGG...GGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGCATTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CAA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGACCAGCCTGCACCTCTaGGAAGGTCAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGETSLHL*EGQGSH
Trigger: GTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGGT...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp GACTCGGCCATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTGTAGACTCGGCCATCTaGCCAACTCATAGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: DSAILPTHSSRGLVWHSRVDSAI*PTHSSR
Trigger: TCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC...ACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGATGGCCGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS CCA 90 bp CTCTTCTTGCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTaGCGGCCATGGAAGGAGAGGCGGATGTCAGCCGCACCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LFLPGPSKVLEQYEL*RPWKERRMSAAPAC
Trigger: GCAGGCTGGTGCGGCTGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGCAAGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552763.1
CDS-3UTR CAA 90 bp AGACAGCAGCATCCAGGTTTCCGGGGAGCCCCTCCCAAAGGGCAGACACTCGGATTAAGGGTCTTCTGGTaGAAGGGATCCTCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: RQQHPGFRGAPPKGQTLGLRVFW*KGSSRP
Trigger: TGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAA...TCCGAGTGTCTGCCCTTTGGGAGGGGCTCCCCGGAAACCTGGATGCTGCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS-3UTR CAA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGCTGAGATCTACGGTCTaGCGCCTGCTACAGCACCTG +
Preference number: 5 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGELRSTV*RLLQHL
Trigger: CAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp TCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCACTGGGGGCACAAGGATTCCAAGGCCCTaGCTCAGTTTACTGGCCATG +
Preference number: 5 (lower is better)
Translates to: SLLQGSGMGLGSVGTGGTRIPRP*LSLLAM
Trigger: CATGGCCAGTAAACTGAGCAAGGGCCTTGGAATCCT...TGTGCCCCCAGTGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS TCA 90 bp ACGAGGCTGCCTCATGCGGGCCCTTGTGGCATCATCCAGCTGACCTaGGACTGGAAGTTCAGATGCTTCCTGAAAAGCTCTCAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: TRLPHAGPCGIIQLT*DWKFRCFLKSSQSL
Trigger: GAGGCTCTGAGAGCTTTTCAGGAAGCATCTGAACTTCCAGTCTCAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGAGGCAGCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
CDS TCA 90 bp ACGAGGCTGCCTCATGCGGGCCCTTGTGGCATCATCCAGCTGACCTaGGACTGGAAGTTCAGATGCTTCCTGAAAAGCTCTGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: TRLPHAGPCGIIQLT*DWKFRCFLKSSEGG
Trigger: CCCTCCTTCAGAGCTTTTCAGGAAGCATCTGAACTTCCAGTCTCAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGAGGCAGCCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547487.5
CDS GCA 90 bp TCTCAGGAATGCCCATCACTGTCCCTTACCTTCCCAGCCACTCCCTaGTCTCTGACCCAGTCCTCTCTGGCCCATACCTCTAAGGTATGC +
Preference number: 5 (lower is better)
Translates to: SQECPSLSLTFPATP*SLTQSSLAHTSKVC
Trigger: GCATACCTTAGAGGTATGGGCCAGAGAGGACTGGGTCAGAGAGCAGGGAGTGGCTGGGAAGGTAAGGGACAGTGATGGGCATTCCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547685.5
CDS-3UTR CAA 90 bp GTTATGCCCGTACCTGAGGGAGTGGTATTCCCACCTGATGGGGTAGTGTCTATAGCCTCATGCGGGCCCTaGTGGCATCATCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: VMPVPEGVVFPPDGVVSIASCGP*WHHPAD
Trigger: GTCAGCTGGATGATGCCACAAGGGCCCGCATGAGGC...TATAGACACTACCCCATCAGGTGGGAATACCACTCCCTCAGGTACGGGCATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CAA 90 bp GATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGGAACAGTACGAGCTTaGGCGGCCATGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: DLRSCACYSTCKVLLSRQGTVRA*AAMEGE
Trigger: CTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCC...CTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTACTGAGATCTACGGTCTaGCGCCTGCTACAGCACCTG +
Preference number: 5 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVLRSTV*RLLQHL
Trigger: CAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp ATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCGTCAAGGGAGCCACATaGCTCCAGTCCTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: ILPTHSSRGLVWHSRKQTVKGAT*LQSWKA
Trigger: AGCCTTCCAGGACTGGAGCAATGTGGCTCCCTTGAC...GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CAA 90 bp CGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCAGCACCAGCCTGCACCTCTaGGAAGGTCAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: RLLQHLQGSTEQTGISFSTSLHL*EGQGSH
Trigger: GTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGGT...GCTGAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp AGCTCCAAGATACCCCAACCTCCAGGCCCTTCATTAGGGGGTAGTTGGGTTTCTGGAACAGTACGAGCTTaGGCGGCCATGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SSKIPQPPGPSLGGSWVSGTVRA*AAMEGE
Trigger: CTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCC...AGAAACCCAACTACCCCCTAATGAAGGGCCTGGAGGTTGGGGTATCTTGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR CAA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAGTAGACTCGGCCATCTaGCCAACTCATAGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVVDSAI*PTHSSR
Trigger: TCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCCAAGGAGAGAGCATaGACCCACCTGCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGSKERA*THLPES
Trigger: AGACTCTGGCAGGTGGGTCAATGCTCTCTCCTTGGA...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp ATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGCCACGGGGCCCTCCATaGCTCATGCTGAAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: IAAEGWFGTPVNKPLIGLPRGPP*LMLKSH
Trigger: ATGGGACTTCAGCATGAGCAATGGAGGGCCCCGTGG...CAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CAA 90 bp TGCTTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGGCCTCATGCGGGCCCTaGTGGCATCATCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: CFSPWVALISSLTRTLFQASCGP*WHHPAD
Trigger: GTCAGCTGGATGATGCCACAAGGGCCCGCATGAGGC...CTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR CAA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGTCAAGGGAGCCACATaGCTCCAGTCCTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVVKGAT*LQSWKA
Trigger: AGCCTTCCAGGACTGGAGCAATGTGGCTCCCTTGAC...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCACCAGCCTGCACCTCTaGGAAGGTCAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFTSLHL*EGQGSH
Trigger: GTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGGT...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGGAACAGTACGAGCTTaGGCGGCCATGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: LYSKLLVEAPVDFALEEVGTVRA*AAMEGE
Trigger: CTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCC...TACTTCTTCAAGGGCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CAA 90 bp CCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGTAGACTCGGCCATCTaGCCAACTCATAGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: PRCIKEDISLPWAARLQWVDSAI*PTHSSR
Trigger: TCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC...CCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGTAGACTCGGCCATCTaGCCAACTCATAGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTVDSAI*PTHSSR
Trigger: TCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp GATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATACTGAGATCTACGGTCTaGCGCCTGCTACAGCACCTG +
Preference number: 5 (lower is better)
Translates to: DGVVSIVRGRQCIQLWEILRSTV*RLLQHL
Trigger: CAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG...TATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp ATAAAGGAAGACATATCCCTCCCCTGGGCAGCAAGGCTACAATGGGAGGGAGGGCATCTCCCTCCACCATaGACCTCCAGAGAAGAGATG +
Preference number: 5 (lower is better)
Translates to: IKEDISLPWAARLQWEGGHLPPP*TSREEM
Trigger: CATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATG...CCCTCCCTCCCATTGTAGCCTTGCTGCCCAGGGGAGGGATATGTCTTCCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp GAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTCCAGAGTCTTGCCTTTaGCCCAAAGGAGCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: EAPVDFALEEVDSAILPTPESCL*PKGAWS
Trigger: AGACCAGGCTCCTTTGGGCAAAAGGCAAGACTCTGG...AGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGGCGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CAA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACATCCAAGGAGAGAGCATaGACCCACCTGCCAGAGTCT +
Preference number: 5 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTSKERA*THLPES
Trigger: AGACTCTGGCAGGTGGGTCAATGCTCTCTCCTTGGA...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTACCATGTCACTCCCATTaGTCCAGGCCTCAGGATCAG +
Preference number: 5 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVPCHSH*SRPQDQ
Trigger: CTGATCCTGAGGCCTGGACAAATGGGAGTGACATGG...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACACCATGTCACTCCCATTaGTCCAGGCCTCAGGATCAG +
Preference number: 5 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTPCHSH*SRPQDQ
Trigger: CTGATCCTGAGGCCTGGACAAATGGGAGTGACATGG...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp GTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGACCACGGGGCCCTCCATaGCTCATGCTGAAGTCCCAT +
Preference number: 5 (lower is better)
Translates to: VSIVRGRQCIQLWEIFLGPRGPP*LMLKSH
Trigger: ATGGGACTTCAGCATGAGCAATGGAGGGCCCCGTGG...TCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CAA 90 bp CCAGTTGTGGGAAATATTTCTGGGATAGCCTTTCTCTACTCGAAGCTGCTGGTTGCCTCATGCGGGCCCTaGTGGCATCATCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: PVVGNISGIAFLYSKLLVASCGP*WHHPAD
Trigger: GTCAGCTGGATGATGCCACAAGGGCCCGCATGAGGC...AACCAGCAGCTTCGAGTAGAGAAAGGCTATCCCAGAAATATTTCCCACAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CAA 90 bp AGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTTAAGGGTCTTCTGGTaGAAGGGATCCTCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: SVRGLRSTVLRLLQHLQGLRVFW*KGSSRP
Trigger: TGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAA...ACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp TGGGTGAGCAGTCAGTATTCAAACGTGGTTTCTGTGGCTGAGAGAGTGGTATCCGGAACAGTACGAGCTTaGGCGGCCATGGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: WVSSQYSNVVSVAERVVSGTVRA*AAMEGE
Trigger: CTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCC...GGATACCACTCTCTCAGCCACAGAAACCACGTTTGAATACTGACTGCTCACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CAA 90 bp AGGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGGTAGACTCGGCCATCTaGCCAACTCATAGCAGCCGA +
Preference number: 5 (lower is better)
Translates to: RKVVAGVGSVRGLRSTVLVDSAI*PTHSSR
Trigger: TCGGCTGCTATGAGTTGGCAAGATGGCCGAGTCTAC...CAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp ATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCATCTCCCTCCACCATaGACCTCCAGAGAAGAGATG +
Preference number: 5 (lower is better)
Translates to: ILPTHSSRGLVWHSRKQTHLPPP*TSREEM
Trigger: CATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATG...GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp AGGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCCATGTCACTCCCATTaGTCCAGGCCTCAGGATCAG +
Preference number: 5 (lower is better)
Translates to: RKVVAGVGSVRGLRSTVLPCHSH*SRPQDQ
Trigger: CTGATCCTGAGGCCTGGACAAATGGGAGTGACATGG...CAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp TCTCTTCTTCTTCCTCATCCCTTATCACTGGACTCTTCTTGCCAGGCCCATCAAGTCAAGGGAGCCACATaGCTCCAGTCCTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SLLLPHPLSLDSSCQAHQVKGAT*LQSWKA
Trigger: AGCCTTCCAGGACTGGAGCAATGTGGCTCCCTTGAC...TTGATGGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAGGAAGAAGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CAA 90 bp TCTTCTTCTTCCTCATCCCTTATCACTGGACTCTTCTTGCCAGGCCCATCAAAAACCAGCCTGCACCTCTaGGAAGGTCAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: SSSSSSLITGLFLPGPSKTSLHL*EGQGSH
Trigger: GTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGGT...TTTTGATGGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAGGAAGAAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CAA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGGGCCCATCAAAAGTATaGGAACAGTACGAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQGPSKV*EQYELW
Trigger: CCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCC...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CTGAGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGGGCCCATCAAAAGTATaGGAACAGTACGAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: LRSTVLRLLQHLQGSTEQGPSKV*EQYELW
Trigger: CCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCC...CTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000552872.5
CDS-3UTR CAA 90 bp GGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGTGAGAAAGAGGAACACCTTTaGGTTGAGAGGCCAATAGAG +
Preference number: 5 (lower is better)
Translates to: GWVVEPQGLMSKIVSVGEKEEHL*VERPIE
Trigger: CTCTATTGGCCTCTCAACCAAAAGGTGTTCCTCTTT...CTCACCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGCATCTCCCTCCACCATaGACCTCCAGAGAAGAGATG +
Preference number: 5 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVHLPPP*TSREEM
Trigger: CATCTCTTCTCTGGAGGTCAATGGTGGAGGGAGATG...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp AGGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGAGGATTCCAAGGCCCTaGCTCAGTTTACTGGCCATG +
Preference number: 5 (lower is better)
Translates to: RKVVAGVGSVRGLRSTVLRIPRP*LSLLAM
Trigger: CATGGCCAGTAAACTGAGCAAGGGCCTTGGAATCCT...CAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CTCTACTCGAAGCTGCTGGTTGAGGCGCCAGTAGACTTTGCCCTTGAAGAAGTAAGGATTCCAAGGCCCTaGCTCAGTTTACTGGCCATG +
Preference number: 5 (lower is better)
Translates to: LYSKLLVEAPVDFALEEVRIPRP*LSLLAM
Trigger: CATGGCCAGTAAACTGAGCAAGGGCCTTGGAATCCT...TACTTCTTCAAGGGCAAAGTCTACTGGCGCCTCAACCAGCAGCTTCGAGTAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCCCAGAGTCTTGCCTTTaGCCCAAAGGAGCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFPESCL*PKGAWS
Trigger: AGACCAGGCTCCTTTGGGCAAAAGGCAAGACTCTGG...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp GGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCCTGGGCCCAAAAGCTGGCTTCTaGCTCCAAGGAGAGAGCATT +
Preference number: 5 (lower is better)
Translates to: GLFLVSQMHKGRHIPPLGPKAGF*LQGESI
Trigger: AATGCTCTCTCCTTGGAGCAAGAAGCCAGCTTTTGG...GCCCAGGGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp ATTAATGCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCCCATGTCACTCCCATTaGTCCAGGCCTCAGGATCAG +
Preference number: 5 (lower is better)
Translates to: INAWGLTSIAHAEVPCHSPCHSH*SRPQDQ
Trigger: CTGATCCTGAGGCCTGGACAAATGGGAGTGACATGG...GGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGCATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552763.1
CDS TCA 90 bp CCAGCTGACCTGAGACTGGAAGTTCAGATGCTTCCTGAAAAGCTCTaGAGGAGGGAGAGGGATGGGTCTACCAGGACAGGAAAATCTGAA +
Preference number: 5 (lower is better)
Translates to: PADLRLEVQMLPEKL*RRERDGSTRTGKSE
Trigger: TTCAGATTTTCCTGTCCTGGTAGACCCATCCCTCTCCCTCCTTCAGAGCTTTTCAGGAAGCATCTGAACTTCCAGTCTCAGGTCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547487.5
CDS-3UTR CAA 90 bp GAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGGGAAAGAAGTGAATCCATaGTGTTCGAGGCGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: ERVGGGASGVNVQDCVCGKEVNP*CSRRVD
Trigger: GTCTACTCGCCTCGAACACAATGGATTCACTTCTTT...CCCACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp GATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGAAAGAAGTGAATCCATaGTGTTCGAGGCGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: DLRSCACYSTCKVLLSRQKEVNP*CSRRVD
Trigger: GTCTACTCGCCTCGAACACAATGGATTCACTTCTTT...CTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAAAAGAGGAACACCTTTaGGTTGAGAGGCCAATAGAG +
Preference number: 5 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVKEEHL*VERPIE
Trigger: CTCTATTGGCCTCTCAACCAAAAGGTGTTCCTCTTT...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CATGGCATCCAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGTGGGGGTCTTAACCTAATGTaGCAAATGGGGAATCTGAGA +
Preference number: 5 (lower is better)
Translates to: HGIQFTTARVWHGTGFCGGLNLM*QMGNLR
Trigger: TCTCAGATTCCCCATTTGCAACATTAGGTTAAGACC...CCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATGCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CCAGTAGACTTTGCCCTTGAAGAAGTAGACTCGGCCATCTTGCCAACTCATAGCTTAAGGGTCTTCTGGTaGAAGGGATCCTCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: PVDFALEEVDSAILPTHSLRVFW*KGSSRP
Trigger: TGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAA...GCTATGAGTTGGCAAGATGGCCGAGTCTACTTCTTCAAGGGCAAAGTCTACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CAA 90 bp GATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATAGGCCCATCAAAAGTATaGGAACAGTACGAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: DGVVSIVRGRQCIQLWEIGPSKV*EQYELW
Trigger: CCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCC...TATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552872.5
CDS-3UTR CAA 90 bp GCGCAGGGTCTGTTCCTGGTTTCCCAGATGCATAAAGGAAGACATATCCCTCCCAAAGAAGTGAATCCATaGTGTTCGAGGCGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: AQGLFLVSQMHKGRHIPPKEVNP*CSRRVD
Trigger: GTCTACTCGCCTCGAACACAATGGATTCACTTCTTT...GGGAGGGATATGTCTTCCTTTATGCATCTGGGAAACCAGGAACAGACCCTGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAAAAGAGGAACACCTTTaGGTTGAGAGGCCAATAGAG +
Preference number: 5 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVKEEHL*VERPIE
Trigger: CTCTATTGGCCTCTCAACCAAAAGGTGTTCCTCTTT...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTAGGTCTTAACCTAATGTaGCAAATGGGGAATCTGAGA +
Preference number: 5 (lower is better)
Translates to: LRSCACYSTCKVLLSRQVGLNLM*QMGNLR
Trigger: TCTCAGATTCCCCATTTGCAACATTAGGTTAAGACC...TACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACGTCCAGCCTCTGCTGTaGCTGCTCTTTTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDVQPLL*LLFSFS
Trigger: AGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGAC...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp GCCTGGGGTCTAACCTCCATTGCTCATGCTGAAGTCCCATGTCACTCCCATTTGACTCAGAATGCTTTGTaGCTCAGAGCGTTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: AWGLTSIAHAEVPCHSHLTQNAL*LRAFQL
Trigger: AAGCTGAAACGCTCTGAGCAACAAAGCATTCTGAGT...CAAATGGGAGTGACATGGGACTTCAGCATGAGCAATGGAGGTTAGACCCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CAA 90 bp ATGAAAGGGTGGGTGGTGGAGCCTCAGGGGTTAATGTCCAAGATTGTGTCTGTGAAAGAGGAACACCTTTaGGTTGAGAGGCCAATAGAG +
Preference number: 5 (lower is better)
Translates to: MKGWVVEPQGLMSKIVSVKEEHL*VERPIE
Trigger: CTCTATTGGCCTCTCAACCAAAAGGTGTTCCTCTTT...CACAGACACAATCTTGGACATTAACCCCTGAGGCTCCACCACCCACCCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp CATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTAAAGAGCTAACCATCTaGACAAATCCTCTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: HSSRGLVWHSRKQTLDWFKELTI*TNPLSP
Trigger: AGGGGACAGAGGATTTGTCAAGATGGTTAGCTCTTT...AAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CAA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCAGTCCAGCCTCTGCTGTaGCTGCTCTTTTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: FSPWVALISSLTRTLFQPVQPLL*LLFSFS
Trigger: AGAGAAAGAAAAGAGCAGCAACAGCAGAGGCTGGAC...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp TTCTCACCGTGGGTGGCACTAATTTCCTCCTTAACCAGAACTTTGTTCCAGCCACCAAAAGCTGGCTTCTaGCTCCAAGGAGAGAGCATT +
Preference number: 5 (lower is better)
Translates to: FSPWVALISSLTRTLFQPPKAGF*LQGESI
Trigger: AATGCTCTCTCCTTGGAGCAAGAAGCCAGCTTTTGG...TGGCTGGAACAAAGTTCTGGTTAAGGAGGAAATTAGTGCCACCCACGGTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp AGGAAAGTGGTGGCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGGCATTTGATACCTTTTaGATGGGAAGAAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: RKVVAGVGSVRGLRSTVLAFDTF*MGRRAL
Trigger: CAGAGCCCTTCTTCCCATCAAAAAGGTATCAAATGC...CAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGCCACCACTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp AGATCTACGGTCTTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAAATGTTCACCTCAGCTaGCCTCACAGTGGTAAAAAT +
Preference number: 5 (lower is better)
Translates to: RSTVLRLLQHLQGSTEQTNVHLS*PHSGKN
Trigger: ATTTTTACCACTGTGAGGCAAGCTGAGGTGAACATT...TGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAAGACCGTAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp ATCTTGCCAACTCATAGCAGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCAATGTTCACCTCAGCTaGCCTCACAGTGGTAAAAAT +
Preference number: 5 (lower is better)
Translates to: ILPTHSSRGLVWHSRKQTNVHLS*PHSGKN
Trigger: ATTTTTACCACTGTGAGGCAAGCTGAGGTGAACATT...GGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCTGCTATGAGTTGGCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS TCA 90 bp AGGGATGGGTCTACCAGGACAGGAAAATCTGAAATGACTGGGAGATaGTTGCTCTTTGACTTCCTGCTGCCCAAGTTCATGGCCAAGAAT +
Preference number: 5 (lower is better)
Translates to: RDGSTRTGKSEMTGR*LLFDFLLPKFMAKN
Trigger: ATTCTTGGCCATGAACTTGGGCAGCAGGAAGTCAAAGAGCAATCATCTCCCAGTCATTTCAGATTTTCCTGTCCTGGTAGACCCATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547487.5
CDS-3UTR CAA 90 bp GCTGGAGTTGGAAGTGTTAGAGGCCTGAGATCTACGGTCTTGCGCCTGCTACAGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCT +
Preference number: 5 (lower is better)
Translates to: AGVGSVRGLRSTVLRLLQVISSG*KLLDPS
Trigger: AGAAGGATCTAATAACTTCAAGCCAGAAGATATCAC...CTGTAGCAGGCGCAAGACCGTAGATCTCAGGCCTCTAACACTTCCAACTCCAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000548629.5
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp GTATTCCCACCTGATGGGGTAGTGTCTATAGTCCGGGGACGACAGTGCATCCAGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCT +
Preference number: 5 (lower is better)
Translates to: VFPPDGVVSIVRGRQCIQVISSG*KLLDPS
Trigger: AGAAGGATCTAATAACTTCAAGCCAGAAGATATCAC...CTGGATGCACTGTCGTCCCCGGACTATAGACACTACCCCATCAGGTGGGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp GCATCATGGCATCCAGTTCACTACTGCAAGGGTCTGGCATGGGACTGGGTTCTGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCT +
Preference number: 5 (lower is better)
Translates to: ASWHPVHYCKGLAWDWVLVISSG*KLLDPS
Trigger: AGAAGGATCTAATAACTTCAAGCCAGAAGATATCAC...CAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATGCCATGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS-3UTR CAA 90 bp ATGAACATGGAGTTAGCTTTTATTAAACACAAATGTACCAGACACTGTGCCAGGACCAGCCTGCACCTCTaGGAAGGTCAAGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: MNMELAFIKHKCTRHCARTSLHL*EGQGSH
Trigger: GTGGCTCCCTTGACCTTCCAAGAGGTGCAGGCTGGT...CCTGGCACAGTGTCTGGTACATTTGTGTTTAATAAAAGCTAACTCCATGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR CAA 90 bp CCATTGACCTCCAGAGAAGAGATGACACAGTTGGAAGGGCTGTCTAAGACAGACAAAGAGCTAACCATCTaGACAAATCCTCTGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PLTSREEMTQLEGLSKTDKELTI*TNPLSP
Trigger: AGGGGACAGAGGATTTGTCAAGATGGTTAGCTCTTT...GTCTGTCTTAGACAGCCCTTCCAACTGTGTCATCTCTTCTCTGGAGGTCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp TTGCGCCTGCTACAGCACCTGCAAGGTTCTACTGAGCAGACAGGTATTTCATTCGCATTTGATACCTTTTaGATGGGAAGAAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LRLLQHLQGSTEQTGISFAFDTF*MGRRAL
Trigger: CAGAGCCCTTCTTCCCATCAAAAAGGTATCAAATGC...GAATGAAATACCTGTCTGCTCAGTAGAACCTTGCAGGTGCTGTAGCAGGCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp AGCCGAGGGCTGGTTTGGCACTCCCGTAAACAAACCCTTGATTGGTTTGGGGTAATAGTTTTCTCCATCTaGCTGCATTTCCAGATGTGT +
Preference number: 5 (lower is better)
Translates to: SRGLVWHSRKQTLDWFGVIVFSI*LHFQMC
Trigger: ACACATCTGGAAATGCAGCAAGATGGAGAAAACTAT...TACCCCAAACCAATCAAGGGTTTGTTTACGGGAGTGCCAAACCAGCCCTCGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CAA 90 bp CTTACCCTTAAAGAAGTGAATCCATTGTGTTCGAGGCGAGTAGACAGCAGCATCTCCTTAACCAGAACTTaGTTCCAGCCACTGACCCAT +
Preference number: 5 (lower is better)
Translates to: LTLKEVNPLCSRRVDSSISLTRT*FQPLTH
Trigger: ATGGGTCAGTGGCTGGAACAAAGTTCTGGTTAAGGA...GATGCTGCTGTCTACTCGCCTCGAACACAATGGATTCACTTCTTTAAGGGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CAA 90 bp GACTCTTCTTGCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTTGGCGGCGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCT +
Preference number: 5 (lower is better)
Translates to: DSSCQAHQKYWNSTSFGGVISSG*KLLDPS
Trigger: AGAAGGATCTAATAACTTCAAGCCAGAAGATATCAC...GCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGCAAGAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CAA 90 bp TTCTTTCTCTGCACCCCAAAACAAAGAGCTAACCATCTTGACAAATCCTCTGTCTTAAGGGTCTTCTGGTaGAAGGGATCCTCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: FFLCTPKQRANHLDKSSVLRVFW*KGSSRP
Trigger: TGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAA...GACAGAGGATTTGTCAAGATGGTTAGCTCTTTGTTTTGGGGTGCAGAGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322569.9
CDS-3UTR CAA 90 bp AAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTTTACTGGCGGCCCATCAAAAGTATaGGAACAGTACGAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: KHINVILKDSKALAQFTGGPSKV*EQYELW
Trigger: CCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCC...GCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000552872.5
CDS-3UTR CAA 90 bp GCACCCTCTCTAACAGGCAATCTGGGTAATATAGTTTTCTCCATCTTGCTGCATGGCCCATCAAAAGTATaGGAACAGTACGAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: APSLTGNLGNIVFSILLHGPSKV*EQYELW
Trigger: CCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCC...ATGCAGCAAGATGGAGAAAACTATATTACCCAGATTGCCTGTTAGAGAGGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CAA 90 bp GTGTCTATAGTCCGGGGACGACAGTGCATCCAGTTGTGGGAAATATTTCTGGGAGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCT +
Preference number: 5 (lower is better)
Translates to: VSIVRGRQCIQLWEIFLGVISSG*KLLDPS
Trigger: AGAAGGATCTAATAACTTCAAGCCAGAAGATATCAC...TCCCAGAAATATTTCCCACAACTGGATGCACTGTCGTCCCCGGACTATAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409200.7
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp GCACCCTCTCTAACAGGCAATCTGGGTAATATAGTTTTCTCCATCTTGCTGCATAAAGAAGTGAATCCATaGTGTTCGAGGCGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: APSLTGNLGNIVFSILLHKEVNP*CSRRVD
Trigger: GTCTACTCGCCTCGAACACAATGGATTCACTTCTTT...ATGCAGCAAGATGGAGAAAACTATATTACCCAGATTGCCTGTTAGAGAGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS-3UTR CAA 90 bp CGTAATCATAAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTCCTTAACCAGAACTTaGTTCCAGCCACTGACCCAT +
Preference number: 5 (lower is better)
Translates to: RNHKHINVILKDSKALAQSLTRT*FQPLTH
Trigger: ATGGGTCAGTGGCTGGAACAAAGTTCTGGTTAAGGA...CTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTTATGATTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548882.5
CDS-3UTR CAA 90 bp TCTCTTCTTCTTCCTCATCCCTTATCACTGGACTCTTCTTGCCAGGCCCATCAAATAGTTTTCTCCATCTaGCTGCATTTCCAGATGTGT +
Preference number: 5 (lower is better)
Translates to: SLLLPHPLSLDSSCQAHQIVFSI*LHFQMC
Trigger: ACACATCTGGAAATGCAGCAAGATGGAGAAAACTAT...TTGATGGGCCTGGCAAGAAGAGTCCAGTGATAAGGGATGAGGAAGAAGAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS-3UTR CAA 90 bp CGTAATCATAAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGAAAGAAGTGAATCCATaGTGTTCGAGGCGAGTAGAC +
Preference number: 5 (lower is better)
Translates to: RNHKHINVILKDSKALAQKEVNP*CSRRVD
Trigger: GTCTACTCGCCTCGAACACAATGGATTCACTTCTTT...CTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTTATGATTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS-3UTR CAA 90 bp AAGCACATAAATGTGATTCTCAAGGATTCCAAGGCCCTTGCTCAGTTTACTGGCGGTCTTAACCTAATGTaGCAAATGGGGAATCTGAGA +
Preference number: 5 (lower is better)
Translates to: KHINVILKDSKALAQFTGGLNLM*QMGNLR
Trigger: TCTCAGATTCCCCATTTGCAACATTAGGTTAAGACC...GCCAGTAAACTGAGCAAGGGCCTTGGAATCCTTGAGAATCACATTTATGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322569.9
ENST00000548882.5
ENST00000552872.5
CDS CAA 90 bp CGCAGGGCTGCCCGGGCCAGCAACAGGTATTTAAGGGTCTTCTGGTaGAAGGGATCCTCTAGGCCACAACGAGGCTGCCTCATGCGGGCC +
Preference number: 6 (lower is better)
Translates to: RRAARASNRYLRVFW*KGSSRPQRGCLMRA
Trigger: GGCCCGCATGAGGCAGCCTCGTTGTGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATACCTGTTGCTGGCCCGGGCAGCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548629.5
CDS TCA 72 bp CCACCAGACGAGAGCTCCAGAGGCTGTCCGTGCCTCTaGCCTGAGATTTCTGGGAGCCTTGGGGGAGCAGTG +
Preference number: 6 (lower is better)
Translates to: PPDESSRGCPCL*PEISGSLGGAV
Trigger: CACTGCTCCCCCAAGGCTCCCAGAAATCTCAGGTCAGAGGCACGGACAGCCTCTGGAGCTCTCGTCTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS CCA 72 bp GGAGTAGGAAGCCCAGCCACAGCTGCTGGCAGTTCATaGTCCCACCAGACGAGAGCTCCAGAGGCTGTCCGT +
Preference number: 6 (lower is better)
Translates to: GVGSPATAAGSS*SHQTRAPEAVR
Trigger: ACGGACAGCCTCTGGAGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGGCTTCCTACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS CCA 72 bp CTAGGCCACAACGAGGCTGCCTCATGCGGGCCCTTGTaGCATCATCCAGCTGACCTGAGACTCAGAGCCTCG +
Preference number: 6 (lower is better)
Translates to: LGHNEAASCGPL*HHPADLRLRAS
Trigger: CGAGGCTCTGAGTCTCAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGAGGCAGCCTCGTTGTGGCCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS TCA 72 bp AGACGAGAGCTCCAGAGGCTGTCCGTGCCTCTGACCTaGGATTTCTGGGAGCCTTGGGGGAGCAGTGCTAGG +
Preference number: 6 (lower is better)
Translates to: RRELQRLSVPLT*DFWEPWGSSAR
Trigger: CCTAGCACTGCTCCCCCAAGGCTCCCAGAAATCTCAGGTCAGAGGCACGGACAGCCTCTGGAGCTCTCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS GCA 72 bp GAGACTGTCATGGGGAGTAGGAAGCCCAGCCACAGCTaGTGGCAGTTCATGGTCCCACCAGACGAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: ETVMGSRKPSHS*WQFMVPPDESS
Trigger: GGAGCTCTCGTCTGGTGGGACCATGAACTGCCAGCAGCTGTGGCTGGGCTTCCTACTCCCCATGACAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
ENST00000548882.5
ENST00000552763.1
ENST00000552872.5
CDS GCA 72 bp CACGGGGCCCCAGCATCATGGCATCCAGTTCACTACTaGAAGGGTCTGGCATGGGACTGGGTTCTGTGGGCA +
Preference number: 6 (lower is better)
Translates to: HGAPASWHPVHY*KGLAWDWVLWA
Trigger: TGCCCACAGAACCCAGTCCCATGCCAGACCCTTGCAGTAGTGAACTGGATGCCATGATGCTGGGGCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322569.9
ENST00000548629.5
CDS CCA 72 bp GAACTCGTCTTCGTCGAAGTGCACACTGCCCAGCTCTaGGATGTCGGCATGGGCCAGGACTCTCCCTGGACA +
Preference number: 6 (lower is better)
Translates to: ELVFVEVHTAQL*DVGMGQDSPWT
Trigger: TGTCCAGGGAGAGTCCTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547685.5
CDS CCA 72 bp GAACTCGTCTTCGTCGAAGTGCACACTGCCCAGCTCTaGGATGTCGGCATGGGCCAGGACTCTCCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: ELVFVEVHTAQL*DVGMGQDSPSE
Trigger: CTCTGAGGGAGAGTCCTGGCCCATGCCGACATCCCAGAGCTGGGCAGTGTGCACTTCGACGAAGACGAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS CAA 72 bp GGTCAAGGGAGCCACATTGCTCCAGTCCTGGAAGGCTaGACGCAGGGCTGCCCGGGCCAGCAACAGGTATTT +
Preference number: 6 (lower is better)
Translates to: GQGSHIAPVLEG*TQGCPGQQQVF
Trigger: AAATACCTGTTGCTGGCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTGGAGCAATGTGGCTCCCTTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548629.5
CDS TCA 72 bp GTCAAGGGAGCCACATTGCTCCAGTCCTGGAAGGCTTaGCGCAGGGCTGCCCGGGCCAGCAACAGGTATTTA +
Preference number: 6 (lower is better)
Translates to: VKGATLLQSWKA*RRAARASNRYL
Trigger: TAAATACCTGTTGCTGGCCCGGGCAGCCCTGCGTCAAGCCTTCCAGGACTGGAGCAATGTGGCTCCCTTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548629.5
CDS CAA 72 bp CCTCTAGGCCACAACGAGGCTGCCTCATGCGGGCCCTaGTGGCATCATCCAGCTGACCTGAGACTGGAAGTT +
Preference number: 6 (lower is better)
Translates to: PLGHNEAASCGP*WHHPADLRLEV
Trigger: AACTTCCAGTCTCAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGAGGCAGCCTCGTTGTGGCCTAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
CDS CCA 72 bp GCTGCCCGGGCCAGCAACAGGTATTTAAGGGTCTTCTaGTTGAAGGGATCCTCTAGGCCACAACGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: AARASNRYLRVF*LKGSSRPQRGC
Trigger: GCAGCCTCGTTGTGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATACCTGTTGCTGGCCCGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548629.5
CDS CAA 72 bp GCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTaGGCGGCCATGGAAGGAGAGGCGGATGTCAGCCGC +
Preference number: 6 (lower is better)
Translates to: ARPIKSIGTVRA*AAMEGEADVSR
Trigger: GCGGCTGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552763.1
CDS CAA 72 bp GCCCGGGCCAGCAACAGGTATTTAAGGGTCTTCTGGTaGAAGGGATCCTCTAGGCCACAACGAGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: ARASNRYLRVFW*KGSSRPQRGCL
Trigger: GAGGCAGCCTCGTTGTGGCCTAGAGGATCCCTTCAACCAGAAGACCCTTAAATACCTGTTGCTGGCCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548629.5
CDS CAA 90 bp ACTCTTCTTGCCAGGCCCATCAAAAGTATTGGAACAGTACGAGCTTaGGCGGCCATGGAAGGAGAGGCGGATGTCAGCCGCACCAGCCTG +
Preference number: 6 (lower is better)
Translates to: TLLARPIKSIGTVRA*AAMEGEADVSRTSL
Trigger: CAGGCTGGTGCGGCTGACATCCGCCTCTCCTTCCATGGCCGCCAAAGCTCGTACTGTTCCAATACTTTTGATGGGCCTGGCAAGAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409200.7
ENST00000552763.1
CDS TCA 72 bp CCTCATGCGGGCCCTTGTGGCATCATCCAGCTGACCTaGGACTGGAAGTTCAGATGCTTCCTGAAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: PHAGPCGIIQLT*DWKFRCFLKSS
Trigger: AGAGCTTTTCAGGAAGCATCTGAACTTCCAGTCTCAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322569.9
ENST00000409200.7
ENST00000547487.5
ENST00000548629.5
CDS CCA 72 bp GCTGACAGGGTTACTCCAGCCTCCAGTCCTCATAACTaGGACTTTCTCTTCTGTTCTCAGAGCCTCGGTGAT +
Preference number: 6 (lower is better)
Translates to: ADRVTPASSPHN*DFLFCSQSLGD
Trigger: ATCACCGAGGCTCTGAGAACAGAAGAGAAAGTCCCAGTTATGAGGACTGGAGGCTGGAGTAACCCTGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547487.5
CDS CAA 72 bp TGCCAGTACCCGGAGCCCCTTAAAGAAGTGAATCCATaGTGTTCGAGGCGAGTAGACAGCAGCATCCAGGTT +
Preference number: 6 (lower is better)
Translates to: CQYPEPLKEVNP*CSRRVDSSIQV
Trigger: AACCTGGATGCTGCTGTCTACTCGCCTCGAACACAATGGATTCACTTCTTTAAGGGGCTCCGGGTACTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409200.7
CDS CAA 72 bp TCCAGCGGCCTCAGAGCCTCGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCTAGAGGCTTCTGTAGG +
Preference number: 6 (lower is better)
Translates to: SSGLRASVISSG*KLLDPSRGFCR
Trigger: CCTACAGAAGCCTCTAGAAGGATCTAATAACTTCAAGCCAGAAGATATCACCGAGGCTCTGAGGCCGCTGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS CAA 90 bp CATGGGCCAGGACTCTCCCTCAGAGCCTCGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCTAGAGGCTTCTGTAGGTACCCATAT +
Preference number: 6 (lower is better)
Translates to: HGPGLSLRASVISSG*KLLDPSRGFCRYPY
Trigger: ATATGGGTACCTACAGAAGCCTCTAGAAGGATCTAATAACTTCAAGCCAGAAGATATCACCGAGGCTCTGAGGGAGAGTCCTGGCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS CAA 72 bp GGACTCTCCCTCAGAGCCTCGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCTAGAGGCTTCTGTAGG +
Preference number: 6 (lower is better)
Translates to: GLSLRASVISSG*KLLDPSRGFCR
Trigger: CCTACAGAAGCCTCTAGAAGGATCTAATAACTTCAAGCCAGAAGATATCACCGAGGCTCTGAGGGAGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548882.5
CDS CAA 90 bp GCTTCTTTCTCCAGCGGCCTCAGAGCCTCGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCTAGAGGCTTCTGTAGGTACCCATAT +
Preference number: 6 (lower is better)
Translates to: ASFSSGLRASVISSG*KLLDPSRGFCRYPY
Trigger: ATATGGGTACCTACAGAAGCCTCTAGAAGGATCTAATAACTTCAAGCCAGAAGATATCACCGAGGCTCTGAGGCCGCTGGAGAAAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552763.1
CDS CAA 90 bp CATCCAGCTGACCTGAGACTCAGAGCCTCGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCTAGAGGCTTCTGTAGGTACCCATAT +
Preference number: 6 (lower is better)
Translates to: HPADLRLRASVISSG*KLLDPSRGFCRYPY
Trigger: ATATGGGTACCTACAGAAGCCTCTAGAAGGATCTAATAACTTCAAGCCAGAAGATATCACCGAGGCTCTGAGTCTCAGGTCAGCTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS CAA 72 bp GACCTGAGACTCAGAGCCTCGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCTAGAGGCTTCTGTAGG +
Preference number: 6 (lower is better)
Translates to: DLRLRASVISSG*KLLDPSRGFCR
Trigger: CCTACAGAAGCCTCTAGAAGGATCTAATAACTTCAAGCCAGAAGATATCACCGAGGCTCTGAGTCTCAGGTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552872.5
CDS CAA 90 bp GGGACTTTCTCTTCTGTTCTCAGAGCCTCGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCTAGAGGCTTCTGTAGGTACCCATAT +
Preference number: 6 (lower is better)
Translates to: GTFSSVLRASVISSG*KLLDPSRGFCRYPY
Trigger: ATATGGGTACCTACAGAAGCCTCTAGAAGGATCTAATAACTTCAAGCCAGAAGATATCACCGAGGCTCTGAGAACAGAAGAGAAAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547487.5
CDS CAA 72 bp TCTTCTGTTCTCAGAGCCTCGGTGATATCTTCTGGCTaGAAGTTATTAGATCCTTCTAGAGGCTTCTGTAGG +
Preference number: 6 (lower is better)
Translates to: SSVLRASVISSG*KLLDPSRGFCR
Trigger: CCTACAGAAGCCTCTAGAAGGATCTAATAACTTCAAGCCAGAAGATATCACCGAGGCTCTGAGAACAGAAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547487.5