RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MMP17 (Homo sapiens)

Ensembl gene IDs: ENSG00000198598

Ensembl transcript IDs: ENST00000360564.5, ENST00000534865.1, ENST00000535004.2, ENST00000535291.5, ENST00000537848.5, ENST00000542142.1, ENST00000542648.1, ENST00000545671.6, ENST00000545790.6

Found 479 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTTGGTGGCGCCGGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATaGTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGGCCTGAC +
Preference number: 1 (lower is better)
Translates to: GWWRRHREGWAPSPR*SLQGRRRLAAVRPD
Trigger: GTCAGGCCGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCGGCGCCACCAACC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR CCA 90 bp GGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTaGCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACC +
Preference number: 1 (lower is better)
Translates to: GGPPARDAPSRAGGG*RRCGLTGHPSGAAT
Trigger: GGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR TCA 90 bp GAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGGCCTaGCTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTC +
Preference number: 1 (lower is better)
Translates to: EMLPPGPEEAGGGAA*LGTLLERPPLGSSV
Trigger: GACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR CCA 90 bp TGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGGCCTGACTaGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACA +
Preference number: 1 (lower is better)
Translates to: CSLQGRRRLAAVRPD*APFWSGHPSARQST
Trigger: TGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR CCA 90 bp GGCCGGAGGAGGCTGGCGGCGGTGCGGCCTGACTGGGCACCCTTCTaGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACT +
Preference number: 1 (lower is better)
Translates to: GRRRLAAVRPDWAPF*SGHPSARQSTQSLT
Trigger: AGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAGCCTCCTCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR GCA 90 bp TTGTGGTCGCTGGTGCGCTCGTACACGGCGTCCACGCTGTCCAGGTaGAGCGGCAGGCCCCGCCAGAAGCGGTGCATCTGTGCCGGCTGC +
Preference number: 1 (lower is better)
Translates to: LWSLVRSYTASTLSR*SGRPRQKRCICAGC
Trigger: GCAGCCGGCACAGATGCACCGCTTCTGGCGGGGCCTGCCGCTGCACCTGGACAGCGTGGACGCCGTGTACGAGCGCACCAGCGACCACAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR CCA 90 bp TCTGTCCTCTCATGGGCTCGCGCTGTGTGTCATAGCGTCAGGGCCTaGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: SVLSWARAVCHSVRA*AAVHRAPGDSGGSS
Trigger: GCTGCTGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCTATGACACACAGCGCGAGCCCATGAGAGGACAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
3UTR GCA 90 bp TCCACACACCAGCCAGTCCCGGGCCGTGGACTGTGGGTACCCGGGTaGCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCC +
Preference number: 1 (lower is better)
Translates to: STHQPVPGRGLWVPG*HLQLAIQHFPVLLA
Trigger: GGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR CCA 90 bp ATCCATCGGCCTGTGAGTCTCCACACACCAGCCAGTCCCGGGCCGTaGACTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCA +
Preference number: 1 (lower is better)
Translates to: IHRPVSLHTPASPGP*TVGTRVPPPARHPA
Trigger: TGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGAGACTCACAGGCCGATGGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR CCA 90 bp GGAACGTCCGGACCCTCCACGACAGGTTCCTCTTGTTCCACTTGGTaGGGGCTGGAGCCTGGCGTCTCCTGCGAGCCTGGGTCAGGACAG +
Preference number: 1 (lower is better)
Translates to: GTSGPSTTGSSCSTW*GLEPGVSCEPGSGQ
Trigger: CTGTCCTGACCCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTGGAGGGTCCGGACGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR TCA 90 bp GAGGGCGTAGTACATGAGTGCACGCACCGTGTCGTGCCCCAGTGGTaGGTCCCGTGGGAACGTCCGGACCCTCCACGACAGGTTCCTCTT +
Preference number: 1 (lower is better)
Translates to: EGVVHECTHRVVPQW*VPWERPDPPRQVPL
Trigger: AAGAGGAACCTGTCGTGGAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACACGGTGCGTGCACTCATGTACTACGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR GCA 90 bp CGTTATGGTCGGCCTTGGAGAAGTCGATCTGGATGTCGGCGGCGCTaGCCGCCACCTCGTGGAAGTTCAGGGGCGCAATGTCGCTCCAGA +
Preference number: 1 (lower is better)
Translates to: RYGRPWRSRSGCRRR*PPPRGSSGAQCRSR
Trigger: TCTGGAGCGACATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAAGGCCGACCATAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR CCA 90 bp GGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGGACTGGGCACCCTTCTaGAGCGGCCACCCCTCGGCT +
Preference number: 2 (lower is better)
Translates to: GPQPEMLPPGPEEAGGGADWAPF*SGHPSA
Trigger: AGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTC...CGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR-3UTR CCA 90 bp GCCGGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGCGGTGCGGCCTGACTaGGCACCCTTCTGGAGCGGC +
Preference number: 2 (lower is better)
Translates to: AGTERGGPPARDAPSRAGAVRPD*APFWSG
Trigger: GCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGC...TCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR-3UTR CCA 90 bp AGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCAGCGCCAGTCCCGGGCCGTaGACTGTGGGTACCCGGGTG +
Preference number: 2 (lower is better)
Translates to: SVRAWAAVHRAPGDSGGSASPGP*TVGTRV
Trigger: CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGC...GCTGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR CCA 90 bp AGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCAGCCGTCGGACCAGCGCATaGCGTCGTCCAGCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: SVRAWAAVHRAPGDSGGSRRTSA*RRPACW
Trigger: CCAGCACGCTGGACGACGCCATGCGCTGGTCCGACG...GCTGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR TCA 90 bp GGCCACGGTGCCGCCGGGGCCGTCGAAGGGGTAGCCGTCGTTATGGTCGGCCTTGTCGTGCCCCAGTGGTaGGTCCCGTGGGAACGTCCG +
Preference number: 2 (lower is better)
Translates to: GHGAAGAVEGVAVVMVGLVVPQW*VPWERP
Trigger: CGGACGTTCCCACGGGACTCACCACTGGGGCACGAC...AAGGCCGACCATAACGACGGCTACCCCTTCGACGGCCCCGGCGGCACCGTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR GCA 90 bp CTGGCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCTCCGGCACAGTCCTTaGCCTCTGTGGCCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: LAAVRPDWAPFWSGHPSALRHSP*PLWPGC
Trigger: ACAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAG...AGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR-3UTR GCA 90 bp ATGCCGCCAGGCGGGAGGCTGAAGTCGGAGACGGGGCGCGGGTATCCTTCCTCTTCCACGCTGTCCAGGTaGAGCGGCAGGCCCCGCCAG +
Preference number: 2 (lower is better)
Translates to: MPPGGRLKSETGRGYPSSSTLSR*SGRPRQ
Trigger: CTGGCGGGGCCTGCCGCTGCACCTGGACAGCGTGGA...AGAGGAAGGATACCCGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGCGGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR-3UTR CCA 90 bp GTGAGTCTCCACACACCAGCCAGTCCCGGGCCGTGGACTGTGGGTACCCGGGTGCCGGGCCGTGGACTGTaGGTACCCGGGTGCCACCTC +
Preference number: 2 (lower is better)
Translates to: VSLHTPASPGPWTVGTRVPGRGL*VPGCHL
Trigger: GAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGG...CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGAGACTCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR CCA 90 bp CCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACCCGGGCCGTGGACTGTaGGTACCCGGGTGCCACCTC +
Preference number: 2 (lower is better)
Translates to: PLPRPRPQPQIHRPVSLHPGRGL*VPGCHL
Trigger: GAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGG...GTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR TCA 90 bp AGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCAGCTGCCCCAGAGGTGCATaGGCAGACCTCGTAACCGTC +
Preference number: 2 (lower is better)
Translates to: SVRAWAAVHRAPGDSGGSCPRGA*ADLVTV
Trigger: GACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCA...GCTGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR TCA 90 bp CCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACTCCTGGGCGGTCCTGTaGCATCTGGGGCTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: PLPRPRPQPQIHRPVSLHSWAVL*HLGLGG
Trigger: GCCACCCAGCCCCAGATGTCACAGGACCGCCCAGGA...GTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR-3UTR GCA 90 bp CGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACAAGCCCTGGCGGACAGTaGCCTCTGCTGGCCTTCCGG +
Preference number: 2 (lower is better)
Translates to: RPDWAPFWSGHPSARQSTSPGGQ*PLLAFR
Trigger: CCGGAAGGCCAGCAGAGGGCACTGTCCGCCAGGGCT...TGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR-3UTR CCA 90 bp GCACGCACCGTGTCGTGCCCCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTCCGTCTCCTGCGAGCCTaGGTCAGGACAGGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: ARTVSCPSGESRGNVRTLRLLRA*VRTGRS
Trigger: AGACCTCCCTGTCCTGACCCAGGCTCGCAGGAGACG...GAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACACGGTGCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR CAA 90 bp CGTGGGAACGTCCGGACCCTCCACGACAGGTTCCTCTTGTTCCACTaGGTGGGGGCTGGAGCCTGGCGTCTCCTGCGAGCCTGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: RGNVRTLHDRFLLFH*VGAGAWRLLRAWVR
Trigger: CCTGACCCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTGGAGGGTCCGGACGTTCCCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR GCA 90 bp CCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGAGCCCTGGCGGACAGTaGCCTCTGCTGGCCTTCCGG +
Preference number: 2 (lower is better)
Translates to: PSGAATPRLVSQHSPSLGSPGGQ*PLLAFR
Trigger: CCGGAAGGCCAGCAGAGGGCACTGTCCGCCAGGGCT...CCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR-3UTR GCA 90 bp GCCAGGCGGGAGGCTGAAGTCGGAGACGGGGCGCGGGTATCCTTCCTCTACGTTCTGTGGGTACCCGGGTaGCACCTCCAGCTCGCCATC +
Preference number: 2 (lower is better)
Translates to: ARREAEVGDGARVSFLYVLWVPG*HLQLAI
Trigger: GATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG...AACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR-3UTR GCA 90 bp GGATGTCGGCGGCGCTGCCCGCCACCTCGTGGAAGTTCAGGGGCGCAATGTCGCGGCGTAGTACATGAGTaGACGCACCGTGTCGTGCCC +
Preference number: 2 (lower is better)
Translates to: GCRRRCPPPRGSSGAQCRGVVHE*THRVVP
Trigger: GGGCACGACACGGTGCGTGCACTCATGTACTACGCC...GCGACATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR CCA 90 bp TCTCATGGGCTCGCGCTGTGTGTCATAGCGTCAGGGCCTGGGCCGCTGTCCACACGTCGTCCAGCGTGCTaGGGACACCCCTCCACAGGG +
Preference number: 2 (lower is better)
Translates to: SHGLALCVIASGPGPLSTRRPAC*GHPSTG
Trigger: CCCTGTGGAGGGGTGTCCCCAGCACGCTGGACGACG...TGTGGACAGCGGCCCAGGCCCTGACGCTATGACACACAGCGCGAGCCCATGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535004.2
3UTR-3UTR CCA 90 bp GGCCCCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTTCCTCCGAGCGGCTCTaGTCATGTTGTCCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: GPSAASTPAATDPSACESSSERL*SCCPGG
Trigger: CCCTCCAGGACAACATGACCAGAGCCGCTCGGAGGA...AGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR CCA 90 bp ATAGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCACGATCTTGTGGTCGCTaGTGCGCTCGTACACGGCGT +
Preference number: 2 (lower is better)
Translates to: IASGPGPLSTGRLVTVAARSCGR*CARTRR
Trigger: ACGCCGTGTACGAGCGCACCAGCGACCACAAGATCG...TGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR-3UTR CCA 90 bp CCAGACCTTGAGGGCGTAGTACATGAGTGCACGCACCGTGTCGTGCCCCAGTGGGTGGGGGCTGGAGCCTaGCGTCTCCTGCGAGCCTGG +
Preference number: 2 (lower is better)
Translates to: PDLEGVVHECTHRVVPQWVGAGA*RLLRAW
Trigger: CCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCAC...CCACTGGGGCACGACACGGTGCGTGCACTCATGTACTACGCCCTCAAGGTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR CCA 90 bp CACGCACCGTGTCGTGCCCCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTCCTCTTGTTCCACTTGGTaGGGGCTGGAGCCTGGCGTC +
Preference number: 2 (lower is better)
Translates to: HAPCRAPVVSPVGTSGPSSCSTW*GLEPGV
Trigger: GACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGA...GGAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACACGGTGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR CCA 90 bp CTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTAGTCCTTGCCCTCTGTaGCCAGGCTGTCCCACCGCC +
Preference number: 2 (lower is better)
Translates to: LTGHPSGAATPRLVSQHSSPCPL*PGCPTA
Trigger: GGCGGTGGGACAGCCTGGCCACAGAGGGCAAGGACT...ACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR-3UTR CCA 90 bp CAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGCTTCCGGTGCCAGGGTaGCCCGTCCTCATCCCGCGC +
Preference number: 2 (lower is better)
Translates to: QSTQSLTRGQLRPCHLSLLPVPG*PVLIPR
Trigger: GCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAG...CAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR-3UTR CCA 90 bp CTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCGTCGGACCAGCGCATaGCGTCGTCCAGCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: LWVPGCHLQLAIQHFPVLRRTSA*RRPACW
Trigger: CCAGCACGCTGGACGACGCCATGCGCTGGTCCGACG...GAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR GCA 90 bp GCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGCTGCTGGCCTTCCGGTaGCAGGGTGGCCCGTCCTCA +
Preference number: 2 (lower is better)
Translates to: ARQSTQSLTRGQLRPCHLLLAFR*QGGPSS
Trigger: TGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAG...CAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR-3UTR GCA 90 bp TGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCGTCGTCCAGCGTaGTGGGGACACCCCTCCACA +
Preference number: 2 (lower is better)
Translates to: CGYPGATSSSPSSTFQYSWRRPA*WGHPST
Trigger: TGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCA...GGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR GCA 90 bp TGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGCTGTGGGTACCCGGGTaGCACCTCCAGCTCGCCATC +
Preference number: 2 (lower is better)
Translates to: WVPGCHLQLAIQHFPVLLLWVPG*HLQLAI
Trigger: GATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG...CAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR CCA 90 bp TGCATGAGCAGACCTCGTAACCGTCCTCCGAGCGGCTCTGGTCATGTTGTCCTGGCCAGTCCCGGGCCGTaGACTGTGGGTACCCGGGTG +
Preference number: 2 (lower is better)
Translates to: CMSRPRNRPPSGSGHVVLASPGP*TVGTRV
Trigger: CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGC...CAGGACAACATGACCAGAGCCGCTCGGAGGACGGTTACGAGGTCTGCTCATGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR CCA 90 bp TCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACAGTCCTTGCCCTCTGTaGCCAGGCTGTCCCACCGCC +
Preference number: 2 (lower is better)
Translates to: SARQSTQSLTRGQLRPCHSPCPL*PGCPTA
Trigger: GGCGGTGGGACAGCCTGGCCACAGAGGGCAAGGACT...GTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR-3UTR CCA 90 bp ACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACTCCTCCGAGCGGCTCTaGTCATGTTGTCCTGGAGGG +
Preference number: 2 (lower is better)
Translates to: TRVPPPARHPALSSTPGHSSERL*SCCPGG
Trigger: CCCTCCAGGACAACATGACCAGAGCCGCTCGGAGGA...GTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR TCA 90 bp TCTCATGGGCTCGCGCTGTGTGTCATAGCGTCAGGGCCTGGGCCGCTGTCCACAAGATCCATCGGCCTGTaGGTCTCCACACACCAGCCA +
Preference number: 2 (lower is better)
Translates to: SHGLALCVIASGPGPLSTRSIGL*VSTHQP
Trigger: TGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCT...TGTGGACAGCGGCCCAGGCCCTGACGCTATGACACACAGCGCGAGCCCATGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
3UTR-3UTR TCA 90 bp ACTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTGCCACCGCGTCAAAGTaGGTGCTGCATCTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: TVGTRVPPPARHPALSSTATASK*VLHLWG
Trigger: GCCCCACAGATGCAGCACTCACTTTGACGCGGTGGC...AGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR-3UTR GCA 90 bp TGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAATGGCGTCGTCCAGCGTaGTGGGGACACCCCTCCACA +
Preference number: 2 (lower is better)
Translates to: CHLQLAIQHFPVLLATEEWRRPA*WGHPST
Trigger: TGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCA...TTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR CCA 90 bp TGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAAGTCCTTGCCCTCTGTaGCCAGGCTGTCCCACCGCC +
Preference number: 2 (lower is better)
Translates to: CHLQLAIQHFPVLLATEESPCPL*PGCPTA
Trigger: GGCGGTGGGACAGCCTGGCCACAGAGGGCAAGGACT...TTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
3UTR-3UTR CCA 90 bp TCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCAGTGTGACATCTGGGGCTaGGTGGCACAAGGTCACAGC +
Preference number: 2 (lower is better)
Translates to: STPAATDPSACESPHTSQCDIWG*VAQGHS
Trigger: GCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACA...CTGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR-3UTR CCA 90 bp TTGGAGAAGTCGATCTGGATGTCGGCGGCGCTGCCCGCCACCTCGTGGAAGTTCTCCTCTTGTTCCACTTaGTGGGGGCTGGAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: LEKSIWMSAALPATSWKFSSCST*WGLEPG
Trigger: GCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGA...GAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR GCA 90 bp GCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGTAGGAGGCACCGTCCTCCGGCACAGTCCTTaGCCTCTGTGGCCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: AIQHFPVLLATEEVGGTVLRHSP*PLWPGC
Trigger: ACAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAG...GACGGTGCCTCCTACTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
3UTR-3UTR GCA 90 bp CTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCCGCGTCAAAGTGAGTaGTGCATCTGTGGGGCACGT +
Preference number: 2 (lower is better)
Translates to: LWVPGCHLQLAIQHFPVLPRQSE*CICGAR
Trigger: ACGTGCCCCACAGATGCAGCACTCACTTTGACGCGG...GAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR-3UTR GCA 90 bp ATGATGGAGTGTGCAGCGGCCACATGGCTTAACCCAATGGCGTGGCCAAACTCGGCACGCACCGTGTCGTaGCCCAGTGGTGAGTCCCGT +
Preference number: 2 (lower is better)
Translates to: MMECAAATWLNPMAWPNSARTVS*PSGESR
Trigger: ACGGGACTCACCACTGGGGCACGACACGGTGCGTGC...CGAGTTTGGCCACGCCATTGGGTTAAGCCATGTGGCCGCTGCACACTCCATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR GCA 90 bp TGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGAGGATGCCCCAGAGGTaGATGAGCAGACCTCGTAAC +
Preference number: 2 (lower is better)
Translates to: WVPGCHLQLAIQHFPVLLRMPQR*MSRPRN
Trigger: GTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCT...CAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR-3UTR TCA 90 bp TGCATGAGCAGACCTCGTAACCGTCCTCCGAGCGGCTCTGGTCATGTTGTCCTGAGAAGTACTTGCCTTTaGAGAAGAAAGCTTCACCCC +
Preference number: 2 (lower is better)
Translates to: CMSRPRNRPPSGSGHVVLRSTCL*RRKLHP
Trigger: GGGGTGAAGCTTTCTTCTTCAAAGGCAAGTACTTCT...CAGGACAACATGACCAGAGCCGCTCGGAGGACGGTTACGAGGTCTGCTCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR CAA 90 bp AAGTCGGAGACGGGGCGCGGGTATCCTTCCTCTACGTTATTGTCCTaGAACACCCAGTACCTGTCTCCTTTAAAGAAGACGATCTTGTGG +
Preference number: 2 (lower is better)
Translates to: KSETGRGYPSSTLLS*NTQYLSPLKKTILW
Trigger: CCACAAGATCGTCTTCTTTAAAGGAGACAGGTACTGGGTGTTCAAGGACAATAACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR TCA 72 bp CCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGGCCTaGCTGGGCACCCTTCTGGAGCGGCCACCCCTCGGC +
Preference number: 3 (lower is better)
Translates to: PPGPEEAGGGAA*LGTLLERPPLG
Trigger: GCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR GCA 72 bp CGCCGGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATaGTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTG +
Preference number: 3 (lower is better)
Translates to: RRHREGWAPSPR*SLQGRRRLAAV
Trigger: CACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCGGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR CCA 72 bp GGCCCTGTGGGCCGGCGGGAGCACCAGGCAGCAGTGTaGGTGGGGTTGGTGGCGCCGGCACAGAGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: GPVGRREHQAAV*VGLVAPAQRGV
Trigger: CACCCCTCTCTGTGCCGGCGCCACCAACCCCACCCACACTGCTGCCTGGTGCTCCCGCCGGCCCACAGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR CCA 72 bp CCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTaGCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGA +
Preference number: 3 (lower is better)
Translates to: PARDAPSRAGGG*RRCGLTGHPSG
Trigger: TCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR-3UTR CAA 90 bp GCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCAACTCCGGCACAGTCCTaGCCCTCTGTGGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: ALCWPSGARVARPHPAPATPAQS*PSVARL
Trigger: CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGT...TGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR CCA 72 bp AGGCTGGCGGCGGTGCGGCCTGACTGGGCACCCTTCTaGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAG +
Preference number: 3 (lower is better)
Translates to: RLAAVRPDWAPF*SGHPSARQSTQ
Trigger: CTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
3UTR GCA 72 bp CTGGTGCGCTCGTACACGGCGTCCACGCTGTCCAGGTaGAGCGGCAGGCCCCGCCAGAAGCGGTGCATCTGT +
Preference number: 3 (lower is better)
Translates to: LVRSYTASTLSR*SGRPRQKRCIC
Trigger: ACAGATGCACCGCTTCTGGCGGGGCCTGCCGCTGCACCTGGACAGCGTGGACGCCGTGTACGAGCGCACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR CCA 72 bp GTCTCCACACACCAGCCAGTCCCGGGCCGTGGACTGTaGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAG +
Preference number: 3 (lower is better)
Translates to: VSTHQPVPGRGL*VPGCHLQLAIQ
Trigger: CTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGAGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR CCA 72 bp CCTGTGAGTCTCCACACACCAGCCAGTCCCGGGCCGTaGACTGTGGGTACCCGGGTGCCACCTCCAGCTCGC +
Preference number: 3 (lower is better)
Translates to: PVSLHTPASPGP*TVGTRVPPPAR
Trigger: GCGAGCTGGAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGAGACTCACAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR CCA 72 bp TCATGGGCTCGCGCTGTGTGTCATAGCGTCAGGGCCTaGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGC +
Preference number: 3 (lower is better)
Translates to: SWARAVCHSVRA*AAVHRAPGDSG
Trigger: GCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCTATGACACACAGCGCGAGCCCATGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
3UTR TCA 72 bp AGGAGAAGGCAGCGTCGATGCCGCCAGGCGGGAGGCTaGAGTCGGAGACGGGGCGCGGGTATCCTTCCTCTA +
Preference number: 3 (lower is better)
Translates to: RRRQRRCRQAGG*SRRRGAGILPL
Trigger: TAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGCGGCATCGACGCTGCCTTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR GCA 72 bp CAGCCAGTCCCGGGCCGTGGACTGTGGGTACCCGGGTaGCACCTCCAGCTCGCCATCCAGCACTTTCCAGTA +
Preference number: 3 (lower is better)
Translates to: QPVPGRGLWVPG*HLQLAIQHFPV
Trigger: TACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR GCA 72 bp CACCCCGGATCTGGGCCACCGCGTCAAAGTGAGTGCTaGATCTGTGGGGCACGTCCTTCCTGGGCGGTCCTG +
Preference number: 3 (lower is better)
Translates to: HPGSGPPRQSEC*ICGARPSWAVL
Trigger: CAGGACCGCCCAGGAAGGACGTGCCCCACAGATGCAGCACTCACTTTGACGCGGTGGCCCAGATCCGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR CCA 72 bp CACGGAAGAAGTAGGAGGCACCGTCGGACCAGCGCATaGCGTCGTCCAGCGTGCTGGGGACACCCCTCCACA +
Preference number: 3 (lower is better)
Translates to: HGRSRRHRRTSA*RRPACWGHPST
Trigger: TGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
3UTR CCA 72 bp GGACCCTCCACGACAGGTTCCTCTTGTTCCACTTGGTaGGGGCTGGAGCCTGGCGTCTCCTGCGAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: GPSTTGSSCSTW*GLEPGVSCEPG
Trigger: CCCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTGGAGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR CAA 90 bp TCTCATGGGCTCGCGCTGTGTGTCATAGCGTCAGGGCCTGGGCCGCTGTCCACAACTCCGGCACAGTCCTaGCCCTCTGTGGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: SHGLALCVIASGPGPLSTTPAQS*PSVARL
Trigger: CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGT...TGTGGACAGCGGCCCAGGCCCTGACGCTATGACACACAGCGCGAGCCCATGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
3UTR-3UTR CAA 90 bp GGATGTCGGCGGCGCTGCCCGCCACCTCGTGGAAGTTCAGGGGCGCAATGTCGCCACGACAGGTTCCTCTaGTTCCACTTGGTGGGGGCT +
Preference number: 3 (lower is better)
Translates to: GCRRRCPPPRGSSGAQCRHDRFL*FHLVGA
Trigger: AGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTG...GCGACATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR TCA 72 bp GTACATGAGTGCACGCACCGTGTCGTGCCCCAGTGGTaGGTCCCGTGGGAACGTCCGGACCCTCCACGACAG +
Preference number: 3 (lower is better)
Translates to: VHECTHRVVPQW*VPWERPDPPRQ
Trigger: CTGTCGTGGAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACACGGTGCGTGCACTCATGTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR GCA 72 bp CTTCACCCCGGATCTGGGCCACCGCGTCAAAGTGAGTaGTGCATCTGTGGGGCACGTCCTTCCTGGGCGGTC +
Preference number: 3 (lower is better)
Translates to: LHPGSGPPRQSE*CICGARPSWAV
Trigger: GACCGCCCAGGAAGGACGTGCCCCACAGATGCAGCACTCACTTTGACGCGGTGGCCCAGATCCGGGGTGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR GCA 72 bp CGGCCTTGGAGAAGTCGATCTGGATGTCGGCGGCGCTaGCCGCCACCTCGTGGAAGTTCAGGGGCGCAATGT +
Preference number: 3 (lower is better)
Translates to: RPWRSRSGCRRR*PPPRGSSGAQC
Trigger: ACATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAAGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR CCA 72 bp CCACGACAGGTTCCTCTTGTTCCACTTGGTGGGGGCTaGAGCCTGGCGTCTCCTGCGAGCCTGGGTCAGGAC +
Preference number: 3 (lower is better)
Translates to: PRQVPLVPLGGG*SLASPASLGQD
Trigger: GTCCTGACCCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR CCA 72 bp TCGATCTGGATGTCGGCGGCGCTGCCCGCCACCTCGTaGAAGTTCAGGGGCGCAATGTCGCTCCAGACCTTG +
Preference number: 3 (lower is better)
Translates to: SIWMSAALPATS*KFRGAMSLQTL
Trigger: CAAGGTCTGGAGCGACATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCCAGATCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR CAA 90 bp CGAGCCGCTAGAAAGCAGGGAGAGGTCATGTTGGTCTGGAACGCGTCACAGGGGACTCCGGCACAGTCCTaGCCCTCTGTGGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RAARKQGEVMLVWNASQGTPAQS*PSVARL
Trigger: CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGT...CCCCTGTGACGCGTTCCAGACCAACATGACCTCTCCCTGCTTTCTAGCGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535291.5
3UTR-3UTR CAA 90 bp GGGCGCAATGTCGCTCCAGACCTTGAGGGCGTAGTACATGAGTGCACGCACCGTTTCCTCTTGTTCCACTaGGTGGGGGCTGGAGCCTGG +
Preference number: 3 (lower is better)
Translates to: GRNVAPDLEGVVHECTHRFLLFH*VGAGAW
Trigger: CCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGAA...ACGGTGCGTGCACTCATGTACTACGCCCTCAAGGTCTGGAGCGACATTGCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR-3UTR CAA 90 bp GTGAGTCTCCACACACCAGCCAGTCCCGGGCCGTGGACTGTGGGTACCCGGGTGAGCCGCCAGAAGTACTaGCCTTTGAAGAAGAAAGCT +
Preference number: 3 (lower is better)
Translates to: VSLHTPASPGPWTVGTRVSRQKY*PLKKKA
Trigger: AGCTTTCTTCTTCAAAGGCAAGTACTTCTGGCGGCT...CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGAGACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR CCA 72 bp ACCCAGTACCTGTCTCCTTTAAAGAAGACGATCTTGTaGTCGCTGGTGCGCTCGTACACGGCGTCCACGCTG +
Preference number: 3 (lower is better)
Translates to: TQYLSPLKKTIL*SLVRSYTASTL
Trigger: CAGCGTGGACGCCGTGTACGAGCGCACCAGCGACCACAAGATCGTCTTCTTTAAAGGAGACAGGTACTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR-3UTR CAA 90 bp TGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTCTACGTTATTGTCCTaGAACACCCAGTACCTGTCT +
Preference number: 3 (lower is better)
Translates to: CGYPGATSSSPSSTFQYSSTLLS*NTQYLS
Trigger: AGACAGGTACTGGGTGTTCAAGGACAATAACGTAGA...GGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR TCA 90 bp GCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCGCCAGGCGGGAGGCTaGAGTCGGAGACGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: AAVRPDWAPFWSGHPSARRQAGG*SRRRGA
Trigger: CGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGCG...ACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp TGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGGGAGGCTGGCGGCGGTaGGGCCTGACTGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: WAPSPRCSLQGRRRLAAVGGWRR*GLTGHP
Trigger: AGGGTGCCCAGTCAGGCCGCACCGCCGCCAGCCTCC...CACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp AGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGGCCCCCAGCCCGAGATaGTCCCTCCAGGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: RGGPPARDAPSRAGGGWRAPSPR*SLQGRR
Trigger: CCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGC...CCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCCTTCCGGTGCCAGGGTaGCCCGTCCTCATCCCGCGC +
Preference number: 4 (lower is better)
Translates to: GVGPQPEMLPPGPEEAGGLPVPG*PVLIPR
Trigger: GCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAG...GCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp TGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGGTCTGTGGGGAGGGCTaGCCCACTGGGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: WAPSPRCSLQGRRRLAAVVCGEG*PTGDLG
Trigger: CCCCAGGTCCCCAGTGGGGCAGCCCTCCCCACAGAC...CACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCGCATGGCGCTCACATaGGCCCGCGGGCGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: AAVRPDWAPFWSGHPSARRMALT*ARGRRA
Trigger: TGCACGCCGCCCGCGGGCCCATGTGAGCGCCATGCG...ACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360564.5
CDS-3UTR CCA 90 bp AGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGGTGGGGGCTGGAGCCTaGCGTCTCCTGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RGGPPARDAPSRAGGGWRVGAGA*RLLRAW
Trigger: CCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCAC...CCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp AGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGTCCCCGGCGGTGTGGTaGTGGCCGGGGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RGGPPARDAPSRAGGGWRSPAVW*WPGKKA
Trigger: CGCCTTCTTCCCCGGCCACCACCACACCGCCGGGGA...CCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGGCTGGACCGGTTGTCTaGGGGCTCCGGCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WAPSPRCSLQGRRRLAAVAGPVV*GLRQQG
Trigger: CCCCTGCTGCCGGAGCCCCCAGACAACCGGTCCAGC...CACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CTGGCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTAGCCACCAGTGGGCCTaGGGCCCCCGGGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LAAVRPDWAPFWSGHPSASHQWA*GPRGRG
Trigger: TCCTCTCCCCCGGGGGCCCCAGGCCCACTGGTGGCT...AGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTAGGGCCGGAGGAGGCTaGCGGCGGTGCGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: AAVRPDWAPFWSGHPSARRAGGG*RRCGLT
Trigger: AGTCAGGCCGCACCGCCGCCAGCCTCCTCCGGCCCT...ACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGCACCAGGCAGCAGTGTaGGTGGGGTTGGTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GPQPEMLPPGPEEAGGGAHQAAV*VGLVAP
Trigger: CGGCGCCACCAACCCCACCCACACTGCTGCCTGGTG...CGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GGCCCGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTCGCCAGGCGGGAGGCTaGAGTCGGAGACGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GPSSSRASTSPRDSGTVLRQAGG*SRRRGA
Trigger: CGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGCG...AAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCAGGCGGCGGTGCGGCCTaGCTGGGCACCCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ALCWPSGARVARPHPAPAGGGAA*LGTLLE
Trigger: CTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCC...TGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp AGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCCCGGTCCTACCCAGTaGGAAGCCTGCCACGGGCCA +
Preference number: 4 (lower is better)
Translates to: RGGPPARDAPSRAGGGWRPGPTQ*EACHGP
Trigger: TGGCCCGTGGCAGGCTTCTCACTGGGTAGGACCGGG...CCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS-3UTR GCA 90 bp GCCGGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGATGCAGGGACACCAGGTaGCGGTCCCGCGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AGTERGGPPARDAPSRAGCRDTR*RSRVSR
Trigger: GCGGCTGACGCGGGACCGGCACCTGGTGTCCCTGCA...TCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCCGGGCCGTGGACTGTaGGTACCCGGGTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: AAVRPDWAPFWSGHPSARPGRGL*VPGCHL
Trigger: GAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGG...ACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCCGGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGACGGCACAGAGAGGGGTaGGCCCCCAGCCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: AGTERGGPPARDAPSRAGRHREG*APSPRC
Trigger: GCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCG...TCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCAGGAGGGCTGCCCCACTaGGGACCTGGGGACGGAGGC +
Preference number: 4 (lower is better)
Translates to: ALCWPSGARVARPHPAPAGGLPH*GPGDGG
Trigger: GCCTCCGTCCCCAGGTCCCCAGTGGGGCAGCCCTCC...TGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp CTGGCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTGTCGTGCCCCAGTGGTaGGTCCCGTGGGAACGTCCG +
Preference number: 4 (lower is better)
Translates to: LAAVRPDWAPFWSGHPSAVVPQW*VPWERP
Trigger: CGGACGTTCCCACGGGACTCACCACTGGGGCACGAC...AGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GGCCACGGTGCCGCCGGGGCCGTCGAAGGGGTAGCCGTCGTTATGGTCGGCCTTTCGTCACTCCCAGGCTaGGGTCCTCGGCGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: GHGAAGAVEGVAVVMVGLSSLPG*GPRRAA
Trigger: CGCCGCGCGCCGAGGACCTCAGCCTGGGAGTGACGA...AAGGCCGACCATAACGACGGCTACCCCTTCGACGGCCCCGGCGGCACCGTGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR GCA 90 bp GGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGAAGCGGTGCATCTGTaGCGGCTGCAGGGACACCAG +
Preference number: 4 (lower is better)
Translates to: GVGPQPEMLPPGPEEAGGEAVHL*RLQGHQ
Trigger: CTGGTGTCCCTGCAGCCGGCACAGATGCACCGCTTC...GCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GGCCCGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCACGGGCCACCACTaGTTCCGGGCAGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GPSSSRASTSPRDSGTVLATGHH*FRAGPL
Trigger: GAGGGGGCCTGCCCGGAAGCAGTGGTGGCCCGTGGC...AAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACGGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS-3UTR CCA 90 bp AGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCAGCTCCCCGGCGGTGTGGTaGTGGCCGGGGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SVRAWAAVHRAPGDSGGSSPAVW*WPGKKA
Trigger: CGCCTTCTTCCCCGGCCACCACCACACCGCCGGGGA...GCTGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CTGGCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCGTCCAGCGTGCTaGGGACACCCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: LAAVRPDWAPFWSGHPSARRPAC*GHPSTG
Trigger: CCCTGTGGAGGGGTGTCCCCAGCACGCTGGACGACG...AGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGAGCCACCAGTGGGCCTaGGGCCCCCGGGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RASTSPRDSGTVLALCGQSHQWA*GPRGRG
Trigger: TCCTCTCCCCCGGGGGCCCCAGGCCCACTGGTGGCT...CTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp ACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCCTTCCGGTGCCAGGGTaGCCCGTCCTCATCCCGCGC +
Preference number: 4 (lower is better)
Translates to: TERGGPPARDAPSRAGGGLPVPG*PVLIPR
Trigger: GCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAG...GCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TGCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCCGGCACAGAGAGGGGTaGGCCCCCAGCCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: CPLLAFRCQGGPSSSRASRHREG*APSPRC
Trigger: GCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCG...GCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCGGAGGGCTGCCCCACTaGGGACCTGGGGACGGAGGC +
Preference number: 4 (lower is better)
Translates to: RPHPAPAPPPGTPAQSLPGGLPH*GPGDGG
Trigger: GCCTCCGTCCCCAGGTCCCCAGTGGGGCAGCCCTCC...GGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGTCGTGCCCCAGTGGTaGGTCCCGTGGGAACGTCCG +
Preference number: 4 (lower is better)
Translates to: GTERGGPPARDAPSRAGGVVPQW*VPWERP
Trigger: CGGACGTTCCCACGGGACTCACCACTGGGGCACGAC...TCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCTGCCCCAGAGGTGCATaGGCAGACCTCGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: GVGPQPEMLPPGPEEAGGCPRGA*ADLVTV
Trigger: GACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCA...GCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp AGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGCACACCGTACAGCTaGCAGACGCGCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RGGPPARDAPSRAGGGWRRTPYS*QTRTLS
Trigger: GGACAAGGTGCGCGTCTGGCAGCTGTACGGTGTGCG...CCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGAGGCTCCTCGGGCTaGGCCGTGGGAGACACAGAC +
Preference number: 4 (lower is better)
Translates to: GTERGGPPARDAPSRAGGGGSSG*AVGDTD
Trigger: GTCTGTGTCTCCCACGGCGCAGCCCGAGGAGCCTCC...TCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCCACGCTGTCCAGGTaGAGCGGCAGGCCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: RPHPAPAPPPGTPAQSLPSTLSR*SGRPRQ
Trigger: CTGGCGGGGCCTGCCGCTGCACCTGGACAGCGTGGA...GGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp AGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCTCCGGCACAGTCCTTaGCCTCTGTGGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGGPPARDAPSRAGGGWRLRHSP*PLWPGC
Trigger: ACAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAG...CCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCACTGCTGGCCTTCCGGTaGCAGGGTGGCCCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ALCWPSGARVARPHPAPALLAFR*QGGPSS
Trigger: TGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAG...TGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp ACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCAGCCCTGGCGGACAGTaGCCTCTGCTGGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TERGGPPARDAPSRAGGGSPGGQ*PLLAFR
Trigger: CCGGAAGGCCAGCAGAGGGCACTGTCCGCCAGGGCT...GCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTGCCCCCAGCCCGAGATaGTCCCTCCAGGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: VLIPRQHLPQGLRHSPCPAPSPR*SLQGRR
Trigger: CCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGC...AGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GCCGGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAAGCAGGGTGAGGGGGTaGAACAGAGGGCCCGGTCCT +
Preference number: 4 (lower is better)
Translates to: AGTERGGPPARDAPSRAGSRVRG*NRGPGP
Trigger: AGGACCGGGCCCTCTGTTGCACCCCCTCACCCTGCT...TCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS-3UTR CCA 90 bp TGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGTCTCCTGCGAGCCTaGGTCAGGACAGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: WAPSPRCSLQGRRRLAAVRLLRA*VRTGRS
Trigger: AGACCTCCCTGTCCTGACCCAGGCTCGCAGGAGACG...CACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GGCCCGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTCCGGCGGTGTGGTGGTaGCCGGGGAAGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GPSSSRASTSPRDSGTVLPAVWW*PGKKAW
Trigger: CCACGCCTTCTTCCCCGGCCACCACCACACCGCCGG...AAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTCCACAGGGGGCTGGACCGGTTGTCTaGGGGCTCCGGCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VGPAHGVVQRAGDTPPQGAGPVV*GLRQQG
Trigger: CCCCTGCTGCCGGAGCCCCCAGACAACCGGTCCAGC...CCCCTGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp GGCCCGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTTCCTGGGCGGGGCGCTaGACCGGTTGTCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GPSSSRASTSPRDSGTVLSWAGR*TGCLGA
Trigger: AGCCCCCAGACAACCGGTCCAGCGCCCCGCCCAGGA...AAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp ACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCCGTCGTCCAGCGTGCTaGGGACACCCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: TERGGPPARDAPSRAGGGRRPAC*GHPSTG
Trigger: CCCTGTGGAGGGGTGTCCCCAGCACGCTGGACGACG...GCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp ACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCGACTGGGCACCCTTCTaGAGCGGCCACCCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TERGGPPARDAPSRAGGGDWAPF*SGHPSA
Trigger: AGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTC...GCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGGCTGGCCCCACTGGGGACCTaGGGACGGAGGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PAPPPGTPAQSLPSVARLAPLGT*GRRPCG
Trigger: CCCACAGGGCCTCCGTCCCCAGGTCCCCAGTGGGGC...CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCACCTCCCCGGTAGTACGGCCGCATaGTGGAGTGTGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGLPVPGWPVLIPRQHLPGSTAA*WSVQRP
Trigger: TGGCCGCTGCACACTCCATCATGCGGCCGTACTACC...GGGGAGGTGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTGCCACCGCGTCAAAGTaGGTGCTGCATCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AAVRPDWAPFWSGHPSARATASK*VLHLWG
Trigger: GCCCCACAGATGCAGCACTCACTTTGACGCGGTGGC...ACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTGGAGGCTCCTCGGGCTaGGCCGTGGGAGACACAGAC +
Preference number: 4 (lower is better)
Translates to: GGTVGPAHGVVQRAGDTPGGSSG*AVGDTD
Trigger: GTCTGTGTCTCCCACGGCGCAGCCCGAGGAGCCTCC...AGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GGCCCGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGGAGGCTCCTCGGGCTaGGCCGTGGGAGACACAGAC +
Preference number: 4 (lower is better)
Translates to: GPSSSRASTSPRDSGTVLGGSSG*AVGDTD
Trigger: GTCTGTGTCTCCCACGGCGCAGCCCGAGGAGCCTCC...AAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGATGGCGTCGTCCAGCGTaGTGGGGACACCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GTERGGPPARDAPSRAGGWRRPA*WGHPST
Trigger: TGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCA...TCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp ACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCCTGTGGGTACCCGGGTaGCACCTCCAGCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: TERGGPPARDAPSRAGGGLWVPG*HLQLAI
Trigger: GATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG...GCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGGTCTGTGGGGAGGGCTaGCCCACTGGGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: LIPRQHLPQGLRHSPCPLVCGEG*PTGDLG
Trigger: CCCCAGGTCCCCAGTGGGGCAGCCCTCCCCACAGAC...CAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGGCAGCTGCCCTGTTGTaGGGTCAGCCGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RASTSPRDSGTVLALCGQAAALL*GQPGAG
Trigger: ACCTGCCCCCGGCTGACCCCACAACAGGGCAGCTGC...CTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CACGCACCGTGTCGTGCCCCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTCCCCGGCGGTGTGGTGGTaGCCGGGGAAGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: HAPCRAPVVSPVGTSGPSPAVWW*PGKKAW
Trigger: CCACGCCTTCTTCCCCGGCCACCACCACACCGCCGG...GGAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACACGGTGCGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp GGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGTGTGCAGCGGCCACATaGCTTAACCCAATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GPQPEMLPPGPEEAGGGACAAAT*LNPMAW
Trigger: CCACGCCATTGGGTTAAGCCATGTGGCCGCTGCACA...CGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GGCCCCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCGGGCCGTGGACTGTaGGTACCCGGGTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: GPSAASTPAATDPSACESPGRGL*VPGCHL
Trigger: GAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGG...AGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGGCTGCCGGGCCGTGGACTGTaGGTACCCGGGTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: PAPPPGTPAQSLPSVARLPGRGL*VPGCHL
Trigger: GAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGG...CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
CDS-3UTR CCA 90 bp GGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGGCCTCTGTCCTCTCATaGGCTCGCGCTGTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: GPQPEMLPPGPEEAGGGAASVLS*ARAVCH
Trigger: ATGACACACAGCGCGAGCCCATGAGAGGACAGAGGC...CGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTAGGGCCGGAGGAGGCTaGCGGCGGTGCGGCCTGACT +
Preference number: 4 (lower is better)
Translates to: SSRASTSPRDSGTVLALCRAGGG*RRCGLT
Trigger: AGTCAGGCCGCACCGCCGCCAGCCTCCTCCGGCCCT...ACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp AGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCAGCGGTAGTACGGCCGCATaGTGGAGTGTGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SVRAWAAVHRAPGDSGGSGSTAA*WSVQRP
Trigger: TGGCCGCTGCACACTCCATCATGCGGCCGTACTACC...GCTGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR TCA 90 bp CCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCTGCCCCAGAGGTGCATaGGCAGACCTCGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: PVPGWPVLIPRQHLPQGLCPRGA*ADLVTV
Trigger: GACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCA...GAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp TGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGTCCAGGCCACCAAACTaGTGCATGGCTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: WAPSPRCSLQGRRRLAAVSRPPN*CMAVMA
Trigger: GGCCATCACAGCCATGCAGCAGTTTGGTGGCCTGGA...CACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CTGGCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTGGCGTAGTACATGAGTaGACGCACCGTGTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LAAVRPDWAPFWSGHPSAGVVHE*THRVVP
Trigger: GGGCACGACACGGTGCGTGCACTCATGTACTACGCC...AGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGGCTGGGATGTCGGCGGCGCTaGCCGCCACCTCGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PAPPPGTPAQSLPSVARLGCRRR*PPPRGS
Trigger: ACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCC...CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
CDS-3UTR GCA 90 bp TGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCCGCGTCAAAGTGAGTaGTGCATCTGTGGGGCACGT +
Preference number: 4 (lower is better)
Translates to: WAPSPRCSLQGRRRLAAVPRQSE*CICGAR
Trigger: ACGTGCCCCACAGATGCAGCACTCACTTTGACGCGG...CACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CTGGCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTTCTTGTGGTCGCTGGTaGGCTCGTACACGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LAAVRPDWAPFWSGHPSASCGRW*ARTRRP
Trigger: TGGACGCCGTGTACGAGCGCACCAGCGACCACAAGA...AGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCACGTCCAGGATGCCGGTaGCCTCCAGGCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: ALCWPSGARVARPHPAPARPGCR*PPGHQT
Trigger: AGTTTGGTGGCCTGGAGGCCACCGGCATCCTGGACG...TGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GGCCCGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTTCATCAGGGCCAGGGTaGCCTCGTCCAGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: GPSSSRASTSPRDSGTVLSSGPG*PRPGCR
Trigger: CCGGCATCCTGGACGAGGCCACCCTGGCCCTGATGA...AAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp ACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCCGTCTCCTGCGAGCCTaGGTCAGGACAGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TERGGPPARDAPSRAGGGRLLRA*VRTGRS
Trigger: AGACCTCCCTGTCCTGACCCAGGCTCGCAGGAGACG...GCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCCGGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGATTGGAGAAGTCGATCTaGATGTCGGCGGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGTERGGPPARDAPSRAGLEKSI*MSAALP
Trigger: GGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAA...TCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GTGAGTCTCCACACACCAGCCAGTCCCGGGCCGTGGACTGTGGGTACCCGGGTGCCGGCGGTGTGGTGGTaGCCGGGGAAGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VSLHTPASPGPWTVGTRVPAVWW*PGKKAW
Trigger: CCACGCCTTCTTCCCCGGCCACCACCACACCGCCGG...CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGAGACTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp GTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCGTGTCCCCGGCGGTGTaGTGGTGGCCGGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VGGTVGPAHGVVQRAGDTVSPAV*WWPGKK
Trigger: CTTCTTCCCCGGCCACCACCACACCGCCGGGGACAC...GGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp GCACGCACCGTGTCGTGCCCCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTCGTGTCCCCGGCGGTGTaGTGGTGGCCGGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ARTVSCPSGESRGNVRTLVSPAV*WWPGKK
Trigger: CTTCTTCCCCGGCCACCACCACACCGCCGGGGACAC...GAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACACGGTGCGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp CCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGGCTGCGTCGGACCAGCGCATaGCGTCGTCCAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PAPPPGTPAQSLPSVARLRRTSA*RRPACW
Trigger: CCAGCACGCTGGACGACGCCATGCGCTGGTCCGACG...CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
CDS-3UTR CCA 90 bp GCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCACCTCCCCTCCTCCGAGCGGCTCTaGTCATGTTGTCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: AGLPVPGWPVLIPRQHLPSSERL*SCCPGG
Trigger: CCCTCCAGGACAACATGACCAGAGCCGCTCGGAGGA...GGGGAGGTGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCGCAGCAGCAGCATGGTaGCAGCCACCAGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RPHPAPAPPPGTPAQSLPAAAAW*QPPVGL
Trigger: CAGGCCCACTGGTGGCTGCCACCATGCTGCTGCTGC...GGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCAGTCCTTGCCCTCTGTaGCCAGGCTGTCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: RPHPAPAPPPGTPAQSLPSPCPL*PGCPTA
Trigger: GGCGGTGGGACAGCCTGGCCACAGAGGGCAAGGACT...GGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGGACTGGGCACCCTTCTaGAGCGGCCACCCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LIPRQHLPQGLRHSPCPLDWAPF*SGHPSA
Trigger: AGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTC...CAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp CGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGGGTAGTACGGCCGCATaGTGGAGTGTGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RASTSPRDSGTVLALCGQGSTAA*WSVQRP
Trigger: TGGCCGCTGCACACTCCATCATGCGGCCGTACTACC...CTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTGCCACCGCGTCAAAGTaGGTGCTGCATCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GGTVGPAHGVVQRAGDTPATASK*VLHLWG
Trigger: GCCCCACAGATGCAGCACTCACTTTGACGCGGTGGC...AGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR TCA 90 bp CCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCAGATCCATCGGCCTGTaGGTCTCCACACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: PVPGWPVLIPRQHLPQGLRSIGL*VSTHQP
Trigger: TGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCT...GAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CTGGATGTCGGCGGCGCTGCCCGCCACCTCGTGGAAGTTCAGGGGCGCAATGTCGGATGTCGGCGGCGCTaGCCGCCACCTCGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LDVGGAARHLVEVQGRNVGCRRR*PPPRGS
Trigger: ACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCC...GACATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR GCA 90 bp TGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGTCAAAGTGAGTGCTaGATCTGTGGGGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: WAPSPRCSLQGRRRLAAVRQSEC*ICGARP
Trigger: AGGACGTGCCCCACAGATGCAGCACTCACTTTGACG...CACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GCGCTGTGTGTCATAGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGTGGCGTCGTCCAGCGTaGTGGGGACACCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: ALCVIASGPGPLSTGRLVWRRPA*WGHPST
Trigger: TGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCA...CACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCTATGACACACAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535004.2
CDS-3UTR GCA 90 bp ATAGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCACTGTGGGTACCCGGGTaGCACCTCCAGCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: IASGPGPLSTGRLVTVAALWVPG*HLQLAI
Trigger: GATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG...TGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCTAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp AGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGAGGATGCCCCAGAGGTaGATGAGCAGACCTCGTAAC +
Preference number: 4 (lower is better)
Translates to: RGGPPARDAPSRAGGGWRRMPQR*MSRPRN
Trigger: GTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCT...CCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GCCGGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGATCCCAGCCCCCTATCTaGCCACAAGGCACCTCTTGT +
Preference number: 4 (lower is better)
Translates to: AGTERGGPPARDAPSRAGSQPPI*PQGTSC
Trigger: ACAAGAGGTGCCTTGTGGGCAGATAGGGGGCTGGGA...TCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS-3UTR GCA 90 bp GCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCACCTCCCCGCAGGTAACCGAACCTaGTTAGCCACTCCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: AGLPVPGWPVLIPRQHLPAGNRT*LATPEG
Trigger: GCCCTCAGGAGTGGCTAAGCAGGTTCGGTTACCTGC...GGGGAGGTGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS-3UTR CCA 90 bp TTATGGTCGGCCTTGGAGAAGTCGATCTGGATGTCGGCGGCGCTGCCCGCCACCCGCATGGCGCTCACATaGGCCCGCGGGCGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: LWSALEKSIWMSAALPATRMALT*ARGRRA
Trigger: TGCACGCCGCCCGCGGGCCCATGTGAGCGCCATGCG...GGTGGCGGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAAGGCCGACCATAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp CCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACGCAGCTGCCCTGTTGTaGGGTCAGCCGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLPRPRPQPQIHRPVSLHAAALL*GQPGAG
Trigger: ACCTGCCCCCGGCTGACCCCACAACAGGGCAGCTGC...GTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGCGTCCAGGATGCCGGTaGCCTCCAGGCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: RASTSPRDSGTVLALCGQRPGCR*PPGHQT
Trigger: AGTTTGGTGGCCTGGAGGCCACCGGCATCCTGGACG...CTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp ATAGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCATCATCAGGGCCAGGGTaGCCTCGTCCAGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: IASGPGPLSTGRLVTVAASSGPG*PRPGCR
Trigger: CCGGCATCCTGGACGAGGCCACCCTGGCCCTGATGA...TGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCTAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTCCACAGGCGTCTCCTGCGAGCCTaGGTCAGGACAGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PSDQRMASSSVLGTPLHRRLLRA*VRTGRS
Trigger: AGACCTCCCTGTCCTGACCCAGGCTCGCAGGAGACG...CCTGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGCCCAGCCCTGTGGGGGCTGGAGCCTaGCGTCTCCTGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QSLTRGQLRPCHLSLPSPVGAGA*RLLRAW
Trigger: CCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCAC...AGGGCTGGGCAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TGCCCCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTCCACGACAGGTTCCTCGTGGGGGCTGGAGCCTaGCGTCTCCTGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CPSGESRGNVRTLHDRFLVGAGA*RLLRAW
Trigger: CCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCAC...GAGGAACCTGTCGTGGAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp GGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGATCCTCTTGTTCCACTTaGTGGGGGCTGGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GTERGGPPARDAPSRAGGSSCST*WGLEPG
Trigger: GCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGA...TCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCCTGCCCGCCACCTCGTaGAAGTTCAGGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: RPHPAPAPPPGTPAQSLPLPATS*KFRGAM
Trigger: CATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAG...GGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCCAGGCGGGAGGCTGAAGTCGGAGACGGGGCGCGGGTATCCTTCCTCTACGTTTCCCCGGCGGTGTGGTaGTGGCCGGGGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: ARREAEVGDGARVSFLYVSPAVW*WPGKKA
Trigger: CGCCTTCTTCCCCGGCCACCACCACACCGCCGGGGA...AACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CCA 90 bp CCCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCAGTGTCCCCGGCGGTGTaGTGGTGGCCGGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PSAASTPAATDPSACESPVSPAV*WWPGKK
Trigger: CTTCTTCCCCGGCCACCACCACACCGCCGGGGACAC...TGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp GCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCAAACAGGTCCATCCCGTaGGCATCCGAGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: ALCWPSGARVARPHPAPANRSIP*ASEERK
Trigger: CTTCCGCTCCTCGGATGCCCACGGGATGGACCTGTT...TGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGCTGGACCGGTTGTCTaGGGGCTCCGGCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: EEVGGTVGPAHGVVQRAGAGPVV*GLRQQG
Trigger: CCCCTGCTGCCGGAGCCCCCAGACAACCGGTCCAGC...CCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp GCCACGGAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTCCGGGCCGTGGACTGTaGGTACCCGGGTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: ATEEVGGTVGPAHGVVQRPGRGL*VPGCHL
Trigger: GAGGTGGCACCCGGGTACCCACAGTCCACGGCCCGG...ACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCAGTCCTTGCCCTCTGTaGCCAGGCTGTCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SSSRASTSPRDSGTVLALSPCPL*PGCPTA
Trigger: GGCGGTGGGACAGCCTGGCCACAGAGGGCAAGGACT...GAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGGCTGCAGTGTGGGTGGGGTTaGTGGCGCCGGCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: PAPPPGTPAQSLPSVARLQCGWG*WRRHRE
Trigger: CTCTCTGTGCCGGCGCCACCAACCCCACCCACACTG...CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACAAGGCAGCAGTGTGGGTaGGGTTGGTGGCGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: RPDWAPFWSGHPSARQSTRQQCG*GWWRRH
Trigger: GTGCCGGCGCCACCAACCCCACCCACACTGCTGCCT...TGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTTGCCCCAGAGGTGCATaGGCAGACCTCGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: GGTVGPAHGVVQRAGDTPCPRGA*ADLVTV
Trigger: GACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCA...AGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCATCCAGGCCACCAAACTaGTGCATGGCTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: ALCWPSGARVARPHPAPASRPPN*CMAVMA
Trigger: GGCCATCACAGCCATGCAGCAGTTTGGTGGCCTGGA...TGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCGGATGTCGGCGGCGCTaGCCGCCACCTCGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RPRPQPQIHRPVSLHTPAGCRRR*PPPRGS
Trigger: ACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCC...GGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GCCAGGCGGGAGGCTGAAGTCGGAGACGGGGCGCGGGTATCCTTCCTCTACGTTGGATGTCGGCGGCGCTaGCCGCCACCTCGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ARREAEVGDGARVSFLYVGCRRR*PPPRGS
Trigger: ACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCC...AACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR GCA 90 bp GAGAGGATGCCCCAGAGGTGCATGAGCAGACCTCGTAACCGTCCTCCGAGCGGCTGCAGGGACACCAGGTaGCGGTCCCGCGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ERMPQRCMSRPRNRPPSGCRDTR*RSRVSR
Trigger: GCGGCTGACGCGGGACCGGCACCTGGTGTCCCTGCA...GCCGCTCGGAGGACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGGCTGGAAGCGGTGCATCTGTaGCGGCTGCAGGGACACCAG +
Preference number: 4 (lower is better)
Translates to: PAPPPGTPAQSLPSVARLEAVHL*RLQGHQ
Trigger: CTGGTGTCCCTGCAGCCGGCACAGATGCACCGCTTC...CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
CDS-3UTR CCA 90 bp CTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCGCATGGCGCTCACATaGGCCCGCGGGCGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: LWVPGCHLQLAIQHFPVLRMALT*ARGRRA
Trigger: TGCACGCCGCCCGCGGGCCCATGTGAGCGCCATGCG...GAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
CDS-3UTR CCA 90 bp ACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGTGGGGGCTGGAGCCTaGCGTCTCCTGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRVPPPARHPALSSTPGHVGAGA*RLLRAW
Trigger: CCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCAC...GTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TGGTCGCTGGTGCGCTCGTACACGGCGTCCACGCTGTCCAGGTGCAGCGGCAGGCTGCCCGCCACCTCGTaGAAGTTCAGGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: WSLVRSYTASTLSRCSGRLPATS*KFRGAM
Trigger: CATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAG...CCTGCCGCTGCACCTGGACAGCGTGGACGCCGTGTACGAGCGCACCAGCGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CCA 90 bp GAGAGGATGCCCCAGAGGTGCATGAGCAGACCTCGTAACCGTCCTCCGAGCGGCCCGGCGGTGTGGTGGTaGCCGGGGAAGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ERMPQRCMSRPRNRPPSGPAVWW*PGKKAW
Trigger: CCACGCCTTCTTCCCCGGCCACCACCACACCGCCGG...GCCGCTCGGAGGACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp AGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTCCAACAGGTCCATCCCGTaGGCATCCGAGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RHRRTSAWRRPACWGHPSNRSIP*ASEERK
Trigger: CTTCCGCTCCTCGGATGCCCACGGGATGGACCTGTT...GGAGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCATGGCTTAACCCAATaGCGTGGCCAAACTCGTGGA +
Preference number: 4 (lower is better)
Translates to: WAPSPRCSLQGRRRLAAVHGLTQ*RGQTRG
Trigger: TCCACGAGTTTGGCCACGCCATTGGGTTAAGCCATG...CACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGATGTGCAGCGGCCACATaGCTTAACCCAATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GTERGGPPARDAPSRAGGCAAAT*LNPMAW
Trigger: CCACGCCATTGGGTTAAGCCATGTGGCCGCTGCACA...TCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCAGTCCTGGGCGGGGCGCTaGACCGGTTGTCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: STPAATDPSACESPHTSQSWAGR*TGCLGA
Trigger: AGCCCCCAGACAACCGGTCCAGCGCCCCGCCCAGGA...CTGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535004.2
CDS-3UTR CCA 90 bp CACGGAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCCGTCGGACCAGCGCATaGCGTCGTCCAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HGRSRRHRRTSAWRRPACRRTSA*RRPACW
Trigger: CCAGCACGCTGGACGACGCCATGCGCTGGTCCGACG...GCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGCCAGTCCCGGGCCGTaGACTGTGGGTACCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PFWSGHPSARQSTQSLTRASPGP*TVGTRV
Trigger: CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGC...CCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTGCCAGTCCCGGGCCGTaGACTGTGGGTACCCGGGTG +
Preference number: 4 (lower is better)
Translates to: LTGHPSGAATPRLVSQHSASPGP*TVGTRV
Trigger: CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGC...ACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp ACGATCTTGTGGTCGCTGGTGCGCTCGTACACGGCGTCCACGCTGTCCAGGTGCGCCAGTCCCGGGCCGTaGACTGTGGGTACCCGGGTG +
Preference number: 4 (lower is better)
Translates to: TILWSLVRSYTASTLSRCASPGP*TVGTRV
Trigger: CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGC...GCACCTGGACAGCGTGGACGCCGTGTACGAGCGCACCAGCGACCACAAGATCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CCA 90 bp GTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTCCACAGGGGTCCTCCGAGCGGCTCTaGTCATGTTGTCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VGPAHGVVQRAGDTPPQGSSERL*SCCPGG
Trigger: CCCTCCAGGACAACATGACCAGAGCCGCTCGGAGGA...CCCCTGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGAGCCACCAGTGGGCCTaGGGCCCCCGGGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: WVPGCHLQLAIQHFPVLLSHQWA*GPRGRG
Trigger: TCCTCTCCCCCGGGGGCCCCAGGCCCACTGGTGGCT...CAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCAGCCACCAGTGGGCCTaGGGCCCCCGGGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LWVPGCHLQLAIQHFPVLSHQWA*GPRGRG
Trigger: TCCTCTCCCCCGGGGGCCCCAGGCCCACTGGTGGCT...GAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp GTGAGTCTCCACACACCAGCCAGTCCCGGGCCGTGGACTGTGGGTACCCGGGTGAGTCCTTGCCCTCTGTaGCCAGGCTGTCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: VSLHTPASPGPWTVGTRVSPCPL*PGCPTA
Trigger: GGCGGTGGGACAGCCTGGCCACAGAGGGCAAGGACT...CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGAGACTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
CDS-3UTR CCA 90 bp CCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGCGGTGCGGCCTGACTaGGCACCCTTCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: PSGAATPRLVSQHSPSLGAVRPD*APFWSG
Trigger: GCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGC...CCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGCCCAGCCCTCACCAGGCAGCAGTGTaGGTGGGGTTGGTGGCGCCG +
Preference number: 4 (lower is better)
Translates to: QSLTRGQLRPCHLSLPSPHQAAV*VGLVAP
Trigger: CGGCGCCACCAACCCCACCCACACTGCTGCCTGGTG...AGGGCTGGGCAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGAGCCCCACTGGGGACCTaGGGACGGAGGCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FWSGHPSARQSTQSLTRGAPLGT*GRRPCG
Trigger: CCCACAGGGCCTCCGTCCCCAGGTCCCCAGTGGGGC...TCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp TCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCAGGTCGTGCCCCAGTGGTaGGTCCCGTGGGAACGTCCG +
Preference number: 4 (lower is better)
Translates to: STPAATDPSACESPHTSQVVPQW*VPWERP
Trigger: CGGACGTTCCCACGGGACTCACCACTGGGGCACGAC...CTGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR TCA 90 bp GATGTCGGCGGCGCTGCCCGCCACCTCGTGGAAGTTCAGGGGCGCAATGTCGCTGGTAGTACGGCCGCATaGTGGAGTGTGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: DVGGAARHLVEVQGRNVAGSTAA*WSVQRP
Trigger: TGGCCGCTGCACACTCCATCATGCGGCCGTACTACC...AGCGACATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR TCA 90 bp CCCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCAGCCACCGCGTCAAAGTaGGTGCTGCATCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PSAASTPAATDPSACESPATASK*VLHLWG
Trigger: GCCCCACAGATGCAGCACTCACTTTGACGCGGTGGC...TGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR TCA 90 bp CGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACAGCCACCGCGTCAAAGTaGGTGCTGCATCTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RPDWAPFWSGHPSARQSTATASK*VLHLWG
Trigger: GCCCCACAGATGCAGCACTCACTTTGACGCGGTGGC...TGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp CGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGAGATCCATCGGCCTGTaGGTCTCCACACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: RASTSPRDSGTVLALCGQRSIGL*VSTHQP
Trigger: TGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCT...CTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGGGCGGCGGTGCGGCCTaGCTGGGCACCCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ARQSTQSLTRGQLRPCHLGGGAA*LGTLLE
Trigger: CTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCC...CAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp TCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCAGTCCTGGGCGGTCCTGTaGCATCTGGGGCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: STPAATDPSACESPHTSQSWAVL*HLGLGG
Trigger: GCCACCCAGCCCCAGATGTCACAGGACCGCCCAGGA...CTGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR GCA 90 bp ATAGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCATCTTGCGTCTGCAGCTaGCCTGTTGTGGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: IASGPGPLSTGRLVTVAASCVCS*PVVGSA
Trigger: GGCTGACCCCACAACAGGGCAGCTGCAGACGCAAGA...TGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGAGCTCCTCTTGCGTCTaGAGCTGCCCTGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: HPAPAPPPGTPAQSLPSVSSSCV*SCPVVG
Trigger: CCCCACAACAGGGCAGCTGCAGACGCAAGAGGAGCT...CACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp TTCCACTTGGTGGGGGCTGGAGCCTGGCGTCTCCTGCGAGCCTGGGTCAGGACAGCACGCACCGTGTCGTaGCCCAGTGGTGAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: FHLVGAGAWRLLRAWVRTARTVS*PSGESR
Trigger: ACGGGACTCACCACTGGGGCACGACACGGTGCGTGC...TGTCCTGACCCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCACCAAGTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR GCA 90 bp GCCAGGCGGGAGGCTGAAGTCGGAGACGGGGCGCGGGTATCCTTCCTCTACGTTGCACGCACCGTGTCGTaGCCCAGTGGTGAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: ARREAEVGDGARVSFLYVARTVS*PSGESR
Trigger: ACGGGACTCACCACTGGGGCACGACACGGTGCGTGC...AACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR GCA 90 bp ATAGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCAGGCGTAGTACATGAGTaGACGCACCGTGTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: IASGPGPLSTGRLVTVAAGVVHE*THRVVP
Trigger: GGGCACGACACGGTGCGTGCACTCATGTACTACGCC...TGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCTAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GGCCCCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTGGCGTAGTACATGAGTaGACGCACCGTGTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: GPSAASTPAATDPSACESGVVHE*THRVVP
Trigger: GGGCACGACACGGTGCGTGCACTCATGTACTACGCC...AGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GAGAGGATGCCCCAGAGGTGCATGAGCAGACCTCGTAACCGTCCTCCGAGCGGCGGAGGCTCCTCGGGCTaGGCCGTGGGAGACACAGAC +
Preference number: 4 (lower is better)
Translates to: ERMPQRCMSRPRNRPPSGGGSSG*AVGDTD
Trigger: GTCTGTGTCTCCCACGGCGCAGCCCGAGGAGCCTCC...GCCGCTCGGAGGACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CGCTGGTGCGCTCGTACACGGCGTCCACGCTGTCCAGGTGCAGCGGCAGGCCCCCGTCAAAGTGAGTGCTaGATCTGTGGGGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: RWCARTRRPRCPGAAAGPRQSEC*ICGARP
Trigger: AGGACGTGCCCCACAGATGCAGCACTCACTTTGACG...GGGGCCTGCCGCTGCACCTGGACAGCGTGGACGCCGTGTACGAGCGCACCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR GCA 90 bp TGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTCCACGCTGTCCAGGTaGAGCGGCAGGCCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: CGYPGATSSSPSSTFQYSSTLSR*SGRPRQ
Trigger: CTGGCGGGGCCTGCCGCTGCACCTGGACAGCGTGGA...GGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCTCTTGTGGTCGCTGGTaGGCTCGTACACGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VGGTVGPAHGVVQRAGDTSCGRW*ARTRRP
Trigger: TGGACGCCGTGTACGAGCGCACCAGCGACCACAAGA...GGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp TGCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCAGGATGCCCCAGAGGTaGATGAGCAGACCTCGTAAC +
Preference number: 4 (lower is better)
Translates to: CPLLAFRCQGGPSSSRASRMPQR*MSRPRN
Trigger: GTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCT...GCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACCTCCGGCACAGTCCTTaGCCTCTGTGGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLPRPRPQPQIHRPVSLHLRHSP*PLWPGC
Trigger: ACAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAG...GTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
CDS-3UTR CCA 90 bp CAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGCCCAGCCCTTCATCAGGGCCAGGGTaGCCTCGTCCAGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: QSLTRGQLRPCHLSLPSPSSGPG*PRPGCR
Trigger: CCGGCATCCTGGACGAGGCCACCCTGGCCCTGATGA...AGGGCTGGGCAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TCCTTCCTGGGCGGTCCTGTGACATCTGGGGCTGGGTGGCACAAGGTCACAGCTGTGGGGGCTGGAGCCTaGCGTCTCCTGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SFLGGPVTSGAGWHKVTAVGAGA*RLLRAW
Trigger: CCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCAC...AGCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACAGGACCGCCCAGGAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CCA 90 bp GGATGTCGGCGGCGCTGCCCGCCACCTCGTGGAAGTTCAGGGGCGCAATGTCGCTCTTGTTCCACTTGGTaGGGGCTGGAGCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: GCRRRCPPPRGSSGAQCRSCSTW*GLEPGV
Trigger: GACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGA...GCGACATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp GTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCTCTTGTTCCACTTGGTaGGGGCTGGAGCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: VGGTVGPAHGVVQRAGDTSCSTW*GLEPGV
Trigger: GACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGA...GGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CCCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACTGCCCGCCACCTCGTaGAAGTTCAGGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: PSAASTPAATDPSACESPLPATS*KFRGAM
Trigger: CATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAG...TGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp GTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCTTGGAGAAGTCGATCTaGATGTCGGCGGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VGGTVGPAHGVVQRAGDTLEKSI*MSAALP
Trigger: GGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAA...GGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTTGGAGAAGTCGATCTaGATGTCGGCGGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSSRASTSPRDSGTVLALLEKSI*MSAALP
Trigger: GGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAA...GAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CGGTGCCGCCGGGGCCGTCGAAGGGGTAGCCGTCGTTATGGTCGGCCTTGGAGATTGGAGAAGTCGATCTaGATGTCGGCGGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RCRRGRRRGSRRYGRPWRLEKSI*MSAALP
Trigger: GGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAA...TCTCCAAGGCCGACCATAACGACGGCTACCCCTTCGACGGCCCCGGCGGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp CCAGACCTTGAGGGCGTAGTACATGAGTGCACGCACCGTGTCGTGCCCCAGTGGTCCCCGGCGGTGTGGTaGTGGCCGGGGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PDLEGVVHECTHRVVPQWSPAVW*WPGKKA
Trigger: CGCCTTCTTCCCCGGCCACCACCACACCGCCGGGGA...CCACTGGGGCACGACACGGTGCGTGCACTCATGTACTACGCCCTCAAGGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp GTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTAACAGGTCCATCCCGTaGGCATCCGAGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VLIPRQHLPQGLRHSPCPNRSIP*ASEERK
Trigger: CTTCCGCTCCTCGGATGCCCACGGGATGGACCTGTT...AGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTCCACAGGTGTGCAGCGGCCACATaGCTTAACCCAATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PSDQRMASSSVLGTPLHRCAAAT*LNPMAW
Trigger: CCACGCCATTGGGTTAAGCCATGTGGCCGCTGCACA...CCTGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGCGATCTTGTGGTCGCTaGTGCGCTCGTACACGGCGT +
Preference number: 4 (lower is better)
Translates to: LIPRQHLPQGLRHSPCPLRSCGR*CARTRR
Trigger: ACGCCGTGTACGAGCGCACCAGCGACCACAAGATCG...CAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GGCCCCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCGATCTTGTGGTCGCTaGTGCGCTCGTACACGGCGT +
Preference number: 4 (lower is better)
Translates to: GPSAASTPAATDPSACESRSCGR*CARTRR
Trigger: ACGCCGTGTACGAGCGCACCAGCGACCACAAGATCG...AGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp ACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACCGTCGTCCAGCGTGCTaGGGACACCCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: TRVPPPARHPALSSTPGHRRPAC*GHPSTG
Trigger: CCCTGTGGAGGGGTGTCCCCAGCACGCTGGACGACG...GTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCAGCGTCGTCCAGCGTGCTaGGGACACCCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: STPAATDPSACESPHTSQRRPAC*GHPSTG
Trigger: CCCTGTGGAGGGGTGTCCCCAGCACGCTGGACGACG...CTGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCAGTCCCGGGCCGTaGACTGTGGGTACCCGGGTG +
Preference number: 4 (lower is better)
Translates to: WVPGCHLQLAIQHFPVLLASPGP*TVGTRV
Trigger: CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGC...CAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TGCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCAGGGAGAGGTCATGTTaGTCTGGAACGCGTCACAGG +
Preference number: 4 (lower is better)
Translates to: CPLLAFRCQGGPSSSRASRERSC*SGTRHR
Trigger: CCTGTGACGCGTTCCAGACCAACATGACCTCTCCCT...GCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCTCCAGTTGGGGGCGCTaGACCGGTTGTCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RPRPQPQIHRPVSLHTPASSWGR*TGCLGA
Trigger: AGCCCCCAGACAACCGGTCCAGCGCCCCCAACTGGA...GGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR CAA 72 bp GTCCGGACCCTCCACGACAGGTTCCTCTTGTTCCACTaGGTGGGGGCTGGAGCCTGGCGTCTCCTGCGAGCC +
Preference number: 4 (lower is better)
Translates to: VRTLHDRFLLFH*VGAGAWRLLRA
Trigger: GGCTCGCAGGAGACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTGGAGGGTCCGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR TCA 90 bp TGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCGTCGTGCCCCAGTGGTaGGTCCCGTGGGAACGTCCG +
Preference number: 4 (lower is better)
Translates to: CGYPGATSSSPSSTFQYSVVPQW*VPWERP
Trigger: CGGACGTTCCCACGGGACTCACCACTGGGGCACGAC...GGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR TCA 90 bp CGGGGCCGTCGAAGGGGTAGCCGTCGTTATGGTCGGCCTTGGAGAAGTCGATCTGTCGTGCCCCAGTGGTaGGTCCCGTGGGAACGTCCG +
Preference number: 4 (lower is better)
Translates to: RGRRRGSRRYGRPWRSRSVVPQW*VPWERP
Trigger: CGGACGTTCCCACGGGACTCACCACTGGGGCACGAC...AGATCGACTTCTCCAAGGCCGACCATAACGACGGCTACCCCTTCGACGGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR GCA 90 bp CCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGCACGCACCGTGTCGTaGCCCAGTGGTGAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: PFWSGHPSARQSTQSLTRARTVS*PSGESR
Trigger: ACGGGACTCACCACTGGGGCACGACACGGTGCGTGC...CCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CTGGATGTCGGCGGCGCTGCCCGCCACCTCGTGGAAGTTCAGGGGCGCAATGTCGGCGTAGTACATGAGTaGACGCACCGTGTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LDVGGAARHLVEVQGRNVGVVHE*THRVVP
Trigger: GGGCACGACACGGTGCGTGCACTCATGTACTACGCC...GACATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR GCA 90 bp CCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGGCTGCTCGTGGACAGCCACTaGAAACAGGTCCATCCCGTG +
Preference number: 4 (lower is better)
Translates to: PAPPPGTPAQSLPSVARLLVDSH*KQVHPV
Trigger: CACGGGATGGACCTGTTTGCAGTGGCTGTCCACGAG...CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
CDS-3UTR GCA 90 bp TCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACTGCAGGGACACCAGGTaGCGGTCCCGCGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SARQSTQSLTRGQLRPCHCRDTR*RSRVSR
Trigger: GCGGCTGACGCGGGACCGGCACCTGGTGTCCCTGCA...GTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGTCCACGCTGTCCAGGTaGAGCGGCAGGCCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: ATSSSPSSTFQYSWPRKKSTLSR*SGRPRQ
Trigger: CTGGCGGGGCCTGCCGCTGCACCTGGACAGCGTGGA...CTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GAGAGGATGCCCCAGAGGTGCATGAGCAGACCTCGTAACCGTCCTCCGAGCGGCTGGCGTCGTCCAGCGTaGTGGGGACACCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: ERMPQRCMSRPRNRPPSGWRRPA*WGHPST
Trigger: TGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCA...GCCGCTCGGAGGACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp ACGATCTTGTGGTCGCTGGTGCGCTCGTACACGGCGTCCACGCTGTCCAGGTGCCTGTGGGTACCCGGGTaGCACCTCCAGCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: TILWSLVRSYTASTLSRCLWVPG*HLQLAI
Trigger: GATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG...GCACCTGGACAGCGTGGACGCCGTGTACGAGCGCACCAGCGACCACAAGATCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR GCA 90 bp TTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGAAGCCCTGGCGGACAGTaGCCTCTGCTGGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: FWSGHPSARQSTQSLTRGSPGGQ*PLLAFR
Trigger: CCGGAAGGCCAGCAGAGGGCACTGTCCGCCAGGGCT...TCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TGGTCGGCCTTGGAGAAGTCGATCTGGATGTCGGCGGCGCTGCCCGCCACCTCGTCCTCTTGTTCCACTTaGTGGGGGCTGGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: WSALEKSIWMSAALPATSSSCST*WGLEPG
Trigger: GCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGA...CGAGGTGGCGGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAAGGCCGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp ATGCCGCCAGGCGGGAGGCTGAAGTCGGAGACGGGGCGCGGGTATCCTTCCTCTTCCTCTTGTTCCACTTaGTGGGGGCTGGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: MPPGGRLKSETGRGYPSSSSCST*WGLEPG
Trigger: GCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGA...AGAGGAAGGATACCCGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGCGGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CCA 90 bp CAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGCCGGCGGTGTGGTGGTaGCCGGGGAAGAAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QSTQSLTRGQLRPCHLSLPAVWW*PGKKAW
Trigger: CCACGCCTTCTTCCCCGGCCACCACCACACCGCCGG...CAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGTCCCCGGCGGTGTGGTaGTGGCCGGGGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: ARQSTQSLTRGQLRPCHLSPAVW*WPGKKA
Trigger: CGCCTTCTTCCCCGGCCACCACCACACCGCCGGGGA...CAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGAGTGTCCCCGGCGGTGTaGTGGTGGCCGGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FWSGHPSARQSTQSLTRGVSPAV*WWPGKK
Trigger: CTTCTTCCCCGGCCACCACCACACCGCCGGGGACAC...TCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGGCTGGACCGGTTGTCTaGGGGCTCCGGCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QSTQSLTRGQLRPCHLSLAGPVV*GLRQQG
Trigger: CCCCTGCTGCCGGAGCCCCCAGACAACCGGTCCAGC...CAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGTCCTGGGCGGGGCGCTaGACCGGTTGTCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ARQSTQSLTRGQLRPCHLSWAGR*TGCLGA
Trigger: AGCCCCCAGACAACCGGTCCAGCGCCCCGCCCAGGA...CAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTGCAGCAGCAGCATGGTaGCAGCCACCAGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LTGHPSGAATPRLVSQHSAAAAW*QPPVGL
Trigger: CAGGCCCACTGGTGGCTGCCACCATGCTGCTGCTGC...ACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGGCCTCTGTCCTCTCATaGGCTCGCGCTGTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LIPRQHLPQGLRHSPCPLASVLS*ARAVCH
Trigger: ATGACACACAGCGCGAGCCCATGAGAGGACAGAGGC...CAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp ACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCGGTGCGGCCTGACTaGGCACCCTTCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: TPRLVSQHSPSLGDSSVLAVRPD*APFWSG
Trigger: GCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGC...AAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGCAGTGTGGGTGGGGTTaGTGGCGCCGGCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: PFWSGHPSARQSTQSLTRQCGWG*WRRHRE
Trigger: CTCTCTGTGCCGGCGCCACCAACCCCACCCACACTG...CCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TTCCACTTGGTGGGGGCTGGAGCCTGGCGTCTCCTGCGAGCCTGGGTCAGGACATCATCAGGGCCAGGGTaGCCTCGTCACTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FHLVGAGAWRLLRAWVRTSSGPG*PRHSQA
Trigger: AGCCTGGGAGTGACGAGGCCACCCTGGCCCTGATGA...TGTCCTGACCCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCACCAAGTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
3UTR CAA 72 bp CGTGGGAACGTCCGGACCCTCCACGACAGGTTCCTCTaGTTCCACTTGGTGGGGGCTGGAGCCTGGCGTCTC +
Preference number: 4 (lower is better)
Translates to: RGNVRTLHDRFL*FHLVGAGAWRL
Trigger: GAGACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTGGAGGGTCCGGACGTTCCCACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR GCA 90 bp GGCCCCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTGCAGGTAACCGAACCTaGTTAGCCACTCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: GPSAASTPAATDPSACESAGNRT*LATPLP
Trigger: TGGGAGTGGAGTGGCTAAGCAGGTTCGGTTACCTGC...AGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp TGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCGCACGCACCGTGTCGTaGCCCAGTGGTGAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: CGYPGATSSSPSSTFQYSARTVS*PSGESR
Trigger: ACGGGACTCACCACTGGGGCACGACACGGTGCGTGC...GGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGGGATGTCGGCGGCGCTaGCCGCCACCTCGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ARQSTQSLTRGQLRPCHLGCRRR*PPPRGS
Trigger: ACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCC...CAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GTGAGTCTCCACACACCAGCCAGTCCCGGGCCGTGGACTGTGGGTACCCGGGTGCTCGTGGACAGCCACTaGAAACAGGTCCATCCCGTG +
Preference number: 4 (lower is better)
Translates to: VSLHTPASPGPWTVGTRVLVDSH*KQVHPV
Trigger: CACGGGATGGACCTGTTTGCAGTGGCTGTCCACGAG...CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGAGACTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCGCACACCGTACAGCTaGCAGACGCGCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LTGHPSGAATPRLVSQHSRTPYS*QTRTLS
Trigger: GGACAAGGTGCGCGTCTGGCAGCTGTACGGTGTGCG...ACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACCGCGTCAAAGTGAGTaGTGCATCTGTGGGGCACGT +
Preference number: 4 (lower is better)
Translates to: RPDWAPFWSGHPSARQSTPRQSE*CICGAR
Trigger: ACGTGCCCCACAGATGCAGCACTCACTTTGACGCGG...TGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp TGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAATGCAGGGACACCAGGTaGCGGTCCCGCGTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CHLQLAIQHFPVLLATEECRDTR*RSRVSR
Trigger: GCGGCTGACGCGGGACCGGCACCTGGTGTCCCTGCA...TTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GAGAGGATGCCCCAGAGGTGCATGAGCAGACCTCGTAACCGTCCTCCGAGCGGCGAAGCGGTGCATCTGTaGCGGCTGCAGGGACACCAG +
Preference number: 4 (lower is better)
Translates to: ERMPQRCMSRPRNRPPSGEAVHL*RLQGHQ
Trigger: CTGGTGTCCCTGCAGCCGGCACAGATGCACCGCTTC...GCCGCTCGGAGGACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGCTCCGGCACAGTCCTTaGCCTCTGTGGCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PSGAATPRLVSQHSPSLGLRHSP*PLWPGC
Trigger: ACAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAG...CCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp ACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTCTGCTGGCCTTCCGGTaGCAGGGTGGCCCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TPRLVSQHSPSLGDSSVLLLAFR*QGGPSS
Trigger: TGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAG...AAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TGCAGGGACACCAGGTGCCGGTCCCGCGTCAGCCGCCAGAAGTACTTGCCTTTGCGTCCAGGATGCCGGTaGCCTCCAGGCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: CRDTRCRSRVSRQKYLPLRPGCR*PPGHQT
Trigger: AGTTTGGTGGCCTGGAGGCCACCGGCATCCTGGACG...CAAAGGCAAGTACTTCTGGCGGCTGACGCGGGACCGGCACCTGGTGTCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CCA 90 bp TGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTCATCAGGGCCAGGGTaGCCTCGTCCAGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: CGYPGATSSSPSSTFQYSSSGPG*PRPGCR
Trigger: CCGGCATCCTGGACGAGGCCACCCTGGCCCTGATGA...GGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CCCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTCCACGACAGGTTCCTCTTGCGTCTCCTGCGAGCCTaGGTCAGGACAGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PSGESRGNVRTLHDRFLLRLLRA*VRTGRS
Trigger: AGACCTCCCTGTCCTGACCCAGGCTCGCAGGAGACG...CAAGAGGAACCTGTCGTGGAGGGTCCGGACGTTCCCACGGGACTCACCACTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp CAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGCCCAGCCCTTCTTGTTCCACTTGGTaGGGGCTGGAGCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: QSLTRGQLRPCHLSLPSPSCSTW*GLEPGV
Trigger: GACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGA...AGGGCTGGGCAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGCTGCCCGCCACCTCGTaGAAGTTCAGGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: PFWSGHPSARQSTQSLTRLPATS*KFRGAM
Trigger: CATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAG...CCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CGAGCCGCTAGAAAGCAGGGAGAGGTCATGTTGGTCTGGAACGCGTCACAGGGGGTGTCCCCGGCGGTGTaGTGGTGGCCGGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RAARKQGEVMLVWNASQGVSPAV*WWPGKK
Trigger: CTTCTTCCCCGGCCACCACCACACCGCCGGGGACAC...CCCCTGTGACGCGTTCCAGACCAACATGACCTCTCCCTGCTTTCTAGCGGCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS-3UTR CCA 90 bp TTCCACTTGGTGGGGGCTGGAGCCTGGCGTCTCCTGCGAGCCTGGGTCAGGACAAACAGGTCCATCCCGTaGGCATCCGAGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: FHLVGAGAWRLLRAWVRTNRSIP*ASEERK
Trigger: CTTCCGCTCCTCGGATGCCCACGGGATGGACCTGTT...TGTCCTGACCCAGGCTCGCAGGAGACGCCAGGCTCCAGCCCCCACCAAGTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp CCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTCCACAGGCATGGCTTAACCCAATaGCGTGGCCAAACTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PSDQRMASSSVLGTPLHRHGLTQ*RGQTRG
Trigger: TCCACGAGTTTGGCCACGCCATTGGGTTAAGCCATG...CCTGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp GGCCCGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTAAGAAGACGATCTTGTaGTCGCTGGTGCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GPSSSRASTSPRDSGTVLKKTIL*SLVRSY
Trigger: GTACGAGCGCACCAGCGACCACAAGATCGTCTTCTT...AAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp ACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTCGTCGGACCAGCGCATaGCGTCGTCCAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPRLVSQHSPSLGDSSVLRRTSA*RRPACW
Trigger: CCAGCACGCTGGACGACGCCATGCGCTGGTCCGACG...AAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGCGTCGGACCAGCGCATaGCGTCGTCCAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ATSSSPSSTFQYSWPRKKRRTSA*RRPACW
Trigger: CCAGCACGCTGGACGACGCCATGCGCTGGTCCGACG...CTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGCCCAGCCCTTCCTCCGAGCGGCTCTaGTCATGTTGTCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QSLTRGQLRPCHLSLPSPSSERL*SCCPGG
Trigger: CCCTCCAGGACAACATGACCAGAGCCGCTCGGAGGA...AGGGCTGGGCAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGAGGCAGCAGTGTGGGTaGGGTTGGTGGCGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: QSTQSLTRGQLRPCHLSLRQQCG*GWWRRH
Trigger: GTGCCGGCGCCACCAACCCCACCCACACTGCTGCCT...CAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACTGCCGCGGCACCATGTaGGGGGCTCGTCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SARQSTQSLTRGQLRPCHCRGTM*GARLWG
Trigger: TCCCCACAGACGAGCCCCCCACATGGTGCCGCGGCA...GTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp CTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCGGTAGTACGGCCGCATaGTGGAGTGTGCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LWVPGCHLQLAIQHFPVLGSTAA*WSVQRP
Trigger: TGGCCGCTGCACACTCCATCATGCGGCCGTACTACC...GAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR TCA 90 bp ACCCAGTACCTGTCTCCTTTAAAGAAGACGATCTTGTGGTCGCTGGTGCGCTCGCGCCAGGCGGGAGGCTaGAGTCGGAGACGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TQYLSPLKKTILWSLVRSRQAGG*SRRRGA
Trigger: CGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGCG...CGAGCGCACCAGCGACCACAAGATCGTCTTCTTTAAAGGAGACAGGTACTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR GCA 90 bp CCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACGCAGGTAACCGAACCTaGTTAGCCACTCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: PLPRPRPQPQIHRPVSLHAGNRT*LATPLP
Trigger: TGGGAGTGGAGTGGCTAAGCAGGTTCGGTTACCTGC...GTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGAGCTCCTCTTGCGTCTaGAGCTGCCCTGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PFWSGHPSARQSTQSLTRSSSCV*SCPVVG
Trigger: CCCCACAACAGGGCAGCTGCAGACGCAAGAGGAGCT...CCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GCCACGGAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTTCCAGGCCACCAAACTaGTGCATGGCTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: ATEEVGGTVGPAHGVVQRSRPPN*CMAVMA
Trigger: GGCCATCACAGCCATGCAGCAGTTTGGTGGCCTGGA...ACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp ACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCACGCACCGTGTCGTaGCCCAGTGGTGAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: TPRLVSQHSPSLGDSSVLARTVS*PSGESR
Trigger: ACGGGACTCACCACTGGGGCACGACACGGTGCGTGC...AAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GCCACGGAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTCTCGTGGACAGCCACTaGAAACAGGTCCATCCCGTG +
Preference number: 4 (lower is better)
Translates to: ATEEVGGTVGPAHGVVQRLVDSH*KQVHPV
Trigger: CACGGGATGGACCTGTTTGCAGTGGCTGTCCACGAG...ACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACGTCAAAGTGAGTGCTaGATCTGTGGGGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: RPDWAPFWSGHPSARQSTRQSEC*ICGARP
Trigger: AGGACGTGCCCCACAGATGCAGCACTCACTTTGACG...TGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GCCACGGAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTCCGCGTCAAAGTGAGTaGTGCATCTGTGGGGCACGT +
Preference number: 4 (lower is better)
Translates to: ATEEVGGTVGPAHGVVQRPRQSE*CICGAR
Trigger: ACGTGCCCCACAGATGCAGCACTCACTTTGACGCGG...ACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCCCGCGTCAAAGTGAGTaGTGCATCTGTGGGGCACGT +
Preference number: 4 (lower is better)
Translates to: RPRPQPQIHRPVSLHTPAPRQSE*CICGAR
Trigger: ACGTGCCCCACAGATGCAGCACTCACTTTGACGCGG...GGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGTGGCGTCGTCCAGCGTaGTGGGGACACCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: QSTQSLTRGQLRPCHLSLWRRPA*WGHPST
Trigger: TGTGGAGGGGTGTCCCCAGCACGCTGGACGACGCCA...CAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp TCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGTGGGTACCCGGGTaGCACCTCCAGCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: SARQSTQSLTRGQLRPCHLWVPG*HLQLAI
Trigger: GATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG...GTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGCGTCTCCTGCGAGCCTaGGTCAGGACAGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: WVPGCHLQLAIQHFPVLLRLLRA*VRTGRS
Trigger: AGACCTCCCTGTCCTGACCCAGGCTCGCAGGAGACG...CAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGTCTTGTTCCACTTGGTaGGGGCTGGAGCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: PSGAATPRLVSQHSPSLGSCSTW*GLEPGV
Trigger: GACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGA...CCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGTCCTCTTGTTCCACTTaGTGGGGGCTGGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PFWSGHPSARQSTQSLTRSSCST*WGLEPG
Trigger: GCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGA...CCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp ACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACTCCTCTTGTTCCACTTaGTGGGGGCTGGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TRVPPPARHPALSSTPGHSSCST*WGLEPG
Trigger: GCCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGA...GTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TGGGAACGTCCGGACCCTCCACGACAGGTTCCTCTTGTTCCACTTGGTGGGGGCCTGCCCGCCACCTCGTaGAAGTTCAGGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: WERPDPPRQVPLVPLGGGLPATS*KFRGAM
Trigger: CATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAG...GCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTGGAGGGTCCGGACGTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp GGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTCGTTATGGTCGGCCTTaGAGAAGTCGATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GGTVGPAHGVVQRAGDTPRYGRP*RSRSGC
Trigger: ACATCCAGATCGACTTCTCCAAGGCCGACCATAACG...AGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGGCCAGCGTTATGGTCGGCCTTaGAGAAGTCGATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: RASTSPRDSGTVLALCGQRYGRP*RSRSGC
Trigger: ACATCCAGATCGACTTCTCCAAGGCCGACCATAACG...CTGGCCACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GAGAGGATGCCCCAGAGGTGCATGAGCAGACCTCGTAACCGTCCTCCGAGCGGCAACAGGTCCATCCCGTaGGCATCCGAGGAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: ERMPQRCMSRPRNRPPSGNRSIP*ASEERK
Trigger: CTTCCGCTCCTCGGATGCCCACGGGATGGACCTGTT...GCCGCTCGGAGGACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGCGATCTTGTGGTCGCTaGTGCGCTCGTACACGGCGT +
Preference number: 4 (lower is better)
Translates to: PSGAATPRLVSQHSPSLGRSCGR*CARTRR
Trigger: ACGCCGTGTACGAGCGCACCAGCGACCACAAGATCG...CCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGGCAGCAGCAGCATGGTaGCAGCCACCAGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ATSSSPSSTFQYSWPRKKAAAAW*QPPVGL
Trigger: CAGGCCCACTGGTGGCTGCCACCATGCTGCTGCTGC...CTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CACGGAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCGCCTCTGTCCTCTCATaGGCTCGCGCTGTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: HGRSRRHRRTSAWRRPACASVLS*ARAVCH
Trigger: ATGACACACAGCGCGAGCCCATGAGAGGACAGAGGC...GCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
CDS-3UTR CCA 90 bp GCCAGGCGGGAGGCTGAAGTCGGAGACGGGGCGCGGGTATCCTTCCTCTACGTTTGTGACATCTGGGGCTaGGTGGCACAAGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: ARREAEVGDGARVSFLYVCDIWG*VAQGHS
Trigger: GCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACA...AACGTAGAGGAAGGATACCCGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CCA 90 bp GTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCTCAAGACAACTTCACTaGGAATCCAGTTGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: VGGTVGPAHGVVQRAGDTSRQLH*ESSWGR
Trigger: GCGCCCCCAACTGGATTCCCAGTGAAGTTGTCTTGA...GGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR TCA 90 bp CTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCTGCCCCAGAGGTGCATaGGCAGACCTCGTAACCGTC +
Preference number: 4 (lower is better)
Translates to: LWVPGCHLQLAIQHFPVLCPRGA*ADLVTV
Trigger: GACGGTTACGAGGTCTGCTCATGCACCTCTGGGGCA...GAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp TTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGATCTTGCGTCTGCAGCTaGCCTGTTGTGGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: FWSGHPSARQSTQSLTRGSCVCS*PVVGSA
Trigger: GGCTGACCCCACAACAGGGCAGCTGCAGACGCAAGA...TCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp TGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCAGCTCCTCTTGCGTCTaGAGCTGCCCTGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: CGYPGATSSSPSSTFQYSSSSCV*SCPVVG
Trigger: CCCCACAACAGGGCAGCTGCAGACGCAAGAGGAGCT...GGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CCCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTCCACGACAGGTTCCTCTTGCTCGTGGACAGCCACTaGAAACAGGTCCATCCCGTG +
Preference number: 4 (lower is better)
Translates to: PSGESRGNVRTLHDRFLLLVDSH*KQVHPV
Trigger: CACGGGATGGACCTGTTTGCAGTGGCTGTCCACGAG...CAAGAGGAACCTGTCGTGGAGGGTCCGGACGTTCCCACGGGACTCACCACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR GCA 90 bp ACTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCGCACACCGTACAGCTaGCAGACGCGCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TVGTRVPPPARHPALSSTRTPYS*QTRTLS
Trigger: GGACAAGGTGCGCGTCTGGCAGCTGTACGGTGTGCG...AGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp TTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGATCTTGTGGTCGCTGGTaGGCTCGTACACGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: FWSGHPSARQSTQSLTRGSCGRW*ARTRRP
Trigger: TGGACGCCGTGTACGAGCGCACCAGCGACCACAAGA...TCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp CACGGAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCAGGATGCCCCAGAGGTaGATGAGCAGACCTCGTAAC +
Preference number: 4 (lower is better)
Translates to: HGRSRRHRRTSAWRRPACRMPQR*MSRPRN
Trigger: GTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCT...GCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp ACTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCGTCCAGGATGCCGGTaGCCTCCAGGCCACCAAACT +
Preference number: 4 (lower is better)
Translates to: TVGTRVPPPARHPALSSTRPGCR*PPGHQT
Trigger: AGTTTGGTGGCCTGGAGGCCACCGGCATCCTGGACG...AGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGTAGGAGGGCAGCAGCAGCATGGTaGCAGCCACCAGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PARHPALSSTPGHGRSRRAAAAW*QPPVGL
Trigger: CAGGCCCACTGGTGGCTGCCACCATGCTGCTGCTGC...CCTCCTACTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp GCCACGGAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTACATCTGGGGCTGGGTaGCACAAGGTCACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ATEEVGGTVGPAHGVVQRTSGAG*HKVTAS
Trigger: AGAAGCTGTGACCTTGTGCCACCCAGCCCCAGATGT...ACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR TCA 90 bp GGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTAGAAGTACTTGCCTTTaGAGAAGAAAGCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: GGTVGPAHGVVQRAGDTPRSTCL*RRKLHP
Trigger: GGGGTGAAGCTTTCTTCTTCAAAGGCAAGTACTTCT...AGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR TCA 90 bp CATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGCTACGTTATTGTCCTTaGACACCCAGTACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: HPAPAPPPGTPAQSLPSVLRYCP*TPSTCL
Trigger: GAGACAGGTACTGGGTGTTCAAGGACAATAACGTAG...CACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp TCCTTCCTGGGCGGTCCTGTGACATCTGGGGCTGGGTGGCACAAGGTCACAGCTAGATCCATCGGCCTGTaGGTCTCCACACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: SFLGGPVTSGAGWHKVTARSIGL*VSTHQP
Trigger: TGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCT...AGCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACAGGACCGCCCAGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR GCA 90 bp CGAGCCGCTAGAAAGCAGGGAGAGGTCATGTTGGTCTGGAACGCGTCACAGGGGGGCGTAGTACATGAGTaGACGCACCGTGTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RAARKQGEVMLVWNASQGGVVHE*THRVVP
Trigger: GGGCACGACACGGTGCGTGCACTCATGTACTACGCC...CCCCTGTGACGCGTTCCAGACCAACATGACCTCTCCCTGCTTTCTAGCGGCTCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS-3UTR GCA 90 bp TCTCATGGGCTCGCGCTGTGTGTCATAGCGTCAGGGCCTGGGCCGCTGTCCACACGTCAAAGTGAGTGCTaGATCTGTGGGGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: SHGLALCVIASGPGPLSTRQSEC*ICGARP
Trigger: AGGACGTGCCCCACAGATGCAGCACTCACTTTGACG...TGTGGACAGCGGCCCAGGCCCTGACGCTATGACACACAGCGCGAGCCCATGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535004.2
CDS-3UTR CCA 90 bp GAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGCATGGCTTAACCCAATaGCGTGGCCAAACTCGTGGA +
Preference number: 4 (lower is better)
Translates to: EEVGGTVGPAHGVVQRAGHGLTQ*RGQTRG
Trigger: TCCACGAGTTTGGCCACGCCATTGGGTTAAGCCATG...CCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TGGGAACGTCCGGACCCTCCACGACAGGTTCCTCTTGTTCCACTTGGTGGGGGCTGTGCAGCGGCCACATaGCTTAACCCAATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: WERPDPPRQVPLVPLGGGCAAAT*LNPMAW
Trigger: CCACGCCATTGGGTTAAGCCATGTGGCCGCTGCACA...GCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTGGAGGGTCCGGACGTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp GCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGCGATCTTGTGGTCGCTaGTGCGCTCGTACACGGCGT +
Preference number: 4 (lower is better)
Translates to: ATSSSPSSTFQYSWPRKKRSCGR*CARTRR
Trigger: ACGCCGTGTACGAGCGCACCAGCGACCACAAGATCG...CTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGTAGGAGGCACCGTCAGCTCCTCTTGCGTCTaGAGCTGCCCTGTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: AIQHFPVLLATEEVGGTVSSSCV*SCPVVG
Trigger: CCCCACAACAGGGCAGCTGCAGACGCAAGAGGAGCT...GACGGTGCCTCCTACTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp CAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGCTCGTGGACAGCCACTaGAAACAGGTCCATCCCGTG +
Preference number: 4 (lower is better)
Translates to: QSTQSLTRGQLRPCHLSLLVDSH*KQVHPV
Trigger: CACGGGATGGACCTGTTTGCAGTGGCTGTCCACGAG...CAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR GCA 90 bp GCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGTAGGAGGCACCGTCTCTTGTGGTCGCTGGTaGGCTCGTACACGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: AIQHFPVLLATEEVGGTVSCGRW*ARTRRP
Trigger: TGGACGCCGTGTACGAGCGCACCAGCGACCACAAGA...GACGGTGCCTCCTACTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAATCTTGTTCCACTTGGTaGGGGCTGGAGCCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: CHLQLAIQHFPVLLATEESCSTW*GLEPGV
Trigger: GACGCCAGGCTCCAGCCCCCACCAAGTGGAACAAGA...TTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGCATGGCTTAACCCAATaGCGTGGCCAAACTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PFWSGHPSARQSTQSLTRHGLTQ*RGQTRG
Trigger: TCCACGAGTTTGGCCACGCCATTGGGTTAAGCCATG...CCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp TCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCAGGCTTCTACCGGCCTCTaGCAATACCAGCTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: STPAATDPSACESPHTSQASTGL*QYQLSR
Trigger: TCTTGAGAGCTGGTATTGCCAGAGGCCGGTAGAAGC...CTGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CCA 90 bp CCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGTAGGAGGCACTGGGAATCCAGTTaGGGGCGCTGGACCGGTTGT +
Preference number: 4 (lower is better)
Translates to: PARHPALSSTPGHGRSRRHWESS*GRWTGC
Trigger: ACAACCGGTCCAGCGCCCCCAACTGGATTCCCAGTG...CCTCCTACTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR TCA 90 bp CCTCTGCCGCGTCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACAGAAGTACTTGCCTTTaGAGAAGAAAGCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: PLPRPRPQPQIHRPVSLHRSTCL*RRKLHP
Trigger: GGGGTGAAGCTTTCTTCTTCAAAGGCAAGTACTTCT...GTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGACGCGGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR TCA 90 bp CAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGCCCAGCCCTCTACGTTATTGTCCTTaGACACCCAGTACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: QSLTRGQLRPCHLSLPSPLRYCP*TPSTCL
Trigger: GAGACAGGTACTGGGTGTTCAAGGACAATAACGTAG...AGGGCTGGGCAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp GAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGCTACGTTATTGTCCTTaGACACCCAGTACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: EEVGGTVGPAHGVVQRAGLRYCP*TPSTCL
Trigger: GAGACAGGTACTGGGTGTTCAAGGACAATAACGTAG...CCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR TCA 90 bp CCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGTAGGAGGAGATCCATCGGCCTGTaGGTCTCCACACACCAGCCA +
Preference number: 4 (lower is better)
Translates to: PARHPALSSTPGHGRSRRRSIGL*VSTHQP
Trigger: TGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCT...CCTCCTACTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp GCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGGCAGGTAACCGAACCTaGTTAGCCACTCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: ARQSTQSLTRGQLRPCHLAGNRT*LATPLP
Trigger: TGGGAGTGGAGTGGCTAAGCAGGTTCGGTTACCTGC...CAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360564.5
CDS-3UTR GCA 90 bp GCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGTAGGAGGCACCGTCTCCAGGCCACCAAACTaGTGCATGGCTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: AIQHFPVLLATEEVGGTVSRPPN*CMAVMA
Trigger: GGCCATCACAGCCATGCAGCAGTTTGGTGGCCTGGA...GACGGTGCCTCCTACTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR GCA 90 bp TGCCGGTCCCGCGTCAGCCGCCAGAAGTACTTGCCTTTGAAGAAGAAAGCTTCACGCACACCGTACAGCTaGCAGACGCGCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CRSRVSRQKYLPLKKKASRTPYS*QTRTLS
Trigger: GGACAAGGTGCGCGTCTGGCAGCTGTACGGTGTGCG...TGAAGCTTTCTTCTTCAAAGGCAAGTACTTCTGGCGGCTGACGCGGGACCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CCA 90 bp CCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGCGTTATGGTCGGCCTTaGAGAAGTCGATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: PFWSGHPSARQSTQSLTRRYGRP*RSRSGC
Trigger: ACATCCAGATCGACTTCTCCAAGGCCGACCATAACG...CCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp CCAGACCTTGAGGGCGTAGTACATGAGTGCACGCACCGTGTCGTGCCCCAGTGGCATGGCTTAACCCAATaGCGTGGCCAAACTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PDLEGVVHECTHRVVPQWHGLTQ*RGQTRG
Trigger: TCCACGAGTTTGGCCACGCCATTGGGTTAAGCCATG...CCACTGGGGCACGACACGGTGCGTGCACTCATGTACTACGCCCTCAAGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp CTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCAAGAAGACGATCTTGTaGTCGCTGGTGCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: LWVPGCHLQLAIQHFPVLKKTIL*SLVRSY
Trigger: GTACGAGCGCACCAGCGACCACAAGATCGTCTTCTT...GAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CGAGCCGCTAGAAAGCAGGGAGAGGTCATGTTGGTCTGGAACGCGTCACAGGGGAGGGAGAGGTCATGTTaGTCTGGAACGCGTCACAGG +
Preference number: 4 (lower is better)
Translates to: RAARKQGEVMLVWNASQGRERSC*SGTRHR
Trigger: CCTGTGACGCGTTCCAGACCAACATGACCTCTCCCT...CCCCTGTGACGCGTTCCAGACCAACATGACCTCTCCCTGCTTTCTAGCGGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS-3UTR GCA 90 bp ACCCAGTACCTGTCTCCTTTAAAGAAGACGATCTTGTGGTCGCTGGTGCGCTCGGAAGCGGTGCATCTGTaGCGGCTGCAGGGACACCAG +
Preference number: 4 (lower is better)
Translates to: TQYLSPLKKTILWSLVRSEAVHL*RLQGHQ
Trigger: CTGGTGTCCCTGCAGCCGGCACAGATGCACCGCTTC...CGAGCGCACCAGCGACCACAAGATCGTCTTCTTTAAAGGAGACAGGTACTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR GCA 90 bp TGCATGAGCAGACCTCGTAACCGTCCTCCGAGCGGCTCTGGTCATGTTGTCCTGAGGATGCCCCAGAGGTaGATGAGCAGACCTCGTAAC +
Preference number: 4 (lower is better)
Translates to: CMSRPRNRPPSGSGHVVLRMPQR*MSRPRN
Trigger: GTTACGAGGTCTGCTCATGCACCTCTGGGGCATCCT...CAGGACAACATGACCAGAGCCGCTCGGAGGACGGTTACGAGGTCTGCTCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp CCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTCCACGACAGGTTCCTCTTGTCGTTATGGTCGGCCTTaGAGAAGTCGATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: PVVSPVGTSGPSTTGSSCRYGRP*RSRSGC
Trigger: ACATCCAGATCGACTTCTCCAAGGCCGACCATAACG...ACAAGAGGAACCTGTCGTGGAGGGTCCGGACGTTCCCACGGGACTCACCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CCA 90 bp TGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCCGTTATGGTCGGCCTTaGAGAAGTCGATCTGGATGT +
Preference number: 4 (lower is better)
Translates to: CGYPGATSSSPSSTFQYSRYGRP*RSRSGC
Trigger: ACATCCAGATCGACTTCTCCAAGGCCGACCATAACG...GGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CCA 90 bp TCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACAAGAAGACGATCTTGTaGTCGCTGGTGCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: SARQSTQSLTRGQLRPCHKKTIL*SLVRSY
Trigger: GTACGAGCGCACCAGCGACCACAAGATCGTCTTCTT...GTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR TCA 90 bp CTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTAGAAGTACTTGCCTTTaGAGAAGAAAGCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: LTGHPSGAATPRLVSQHSRSTCL*RRKLHP
Trigger: GGGGTGAAGCTTTCTTCTTCAAAGGCAAGTACTTCT...ACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp ACCCAGTACCTGTCTCCTTTAAAGAAGACGATCTTGTGGTCGCTGGTGCGCTCGTGTGCAGCGGCCACATaGCTTAACCCAATGGCGTGG +
Preference number: 4 (lower is better)
Translates to: TQYLSPLKKTILWSLVRSCAAAT*LNPMAW
Trigger: CCACGCCATTGGGTTAAGCCATGTGGCCGCTGCACA...CGAGCGCACCAGCGACCACAAGATCGTCTTCTTTAAAGGAGACAGGTACTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR CAA 72 bp AACACCCAGTACCTGTCTCCTTTAAAGAAGACGATCTaGTGGTCGCTGGTGCGCTCGTACACGGCGTCCACG +
Preference number: 4 (lower is better)
Translates to: NTQYLSPLKKTI*WSLVRSYTAST
Trigger: CGTGGACGCCGTGTACGAGCGCACCAGCGACCACAAGATCGTCTTCTTTAAAGGAGACAGGTACTGGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR TCA 90 bp TCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACAGAAGTACTTGCCTTTaGAGAAGAAAGCTTCACCCC +
Preference number: 4 (lower is better)
Translates to: SARQSTQSLTRGQLRPCHRSTCL*RRKLHP
Trigger: GGGGTGAAGCTTTCTTCTTCAAAGGCAAGTACTTCT...GTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CCA 90 bp GTCATCGTAGCGCCAGTACAGCTGGTCCTTAAAGAAATAAGTCCTGTCATTGTGTTGGAGAAGTCGATCTaGATGTCGGCGGCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VIVAPVQLVLKEISPVIVLEKSI*MSAALP
Trigger: GGGCAGCGCCGCCGACATCCAGATCGACTTCTCCAA...CACAATGACAGGACTTATTTCTTTAAGGACCAGCTGTACTGGCGCTACGATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
3UTR CAA 72 bp ACGGGGCGCGGGTATCCTTCCTCTACGTTATTGTCCTaGAACACCCAGTACCTGTCTCCTTTAAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: TGRGYPSSTLLS*NTQYLSPLKKT
Trigger: CGTCTTCTTTAAAGGAGACAGGTACTGGGTGTTCAAGGACAATAACGTAGAGGAAGGATACCCGCGCCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CCA 90 bp GTCATCGTAGCGCCAGTACAGCTGGTCCTTAAAGAAATAAGTCCTGTCATTGTGAAGAAGACGATCTTGTaGTCGCTGGTGCGCTCGTAC +
Preference number: 4 (lower is better)
Translates to: VIVAPVQLVLKEISPVIVKKTIL*SLVRSY
Trigger: GTACGAGCGCACCAGCGACCACAAGATCGTCTTCTT...CACAATGACAGGACTTATTTCTTTAAGGACCAGCTGTACTGGCGCTACGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS TCA 90 bp CCGGGGGCAGGTAACCGAACCTGCTTAGCCACTCCACTCCCAGGCTaGGGTCCTCGGCGCGCGGCGCGGGTGCGGGCGCGGCGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PGAGNRTCLATPLPG*GPRRAARVRARRSP
Trigger: GGGGCTGCGCCGCGCCCGCACCCGCGCCGCGCGCCGAGGACCTCAGCCTGGGAGTGGAGTGGCTAAGCAGGTTCGGTTACCTGCCCCCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000545790.6
CDS TCA 90 bp CGTGGGGTTTTCATCAGGGCCAGGGTGGCCTCGTCACTCCCAGGCTaGGGTCCTCGGCGCGCGGCGCGGGTGCGGGCGCGGCGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: RGVFIRARVASSLPG*GPRRAARVRARRSP
Trigger: GGGGCTGCGCCGCGCCCGCACCCGCGCCGCGCGCCGAGGACCTCAGCCTGGGAGTGACGAGGCCACCCTGGCCCTGATGAAAACCCCACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CAA 90 bp AGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCAGCGCGGCTCTGGTCATGTaGTCCTGGAGGGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: SVRAWAAVHRAPGDSGGSAALVM*SWRGAG
Trigger: CCCCGCGCCCCTCCAGGACAACATGACCAGAGCCGC...GCTGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS CCA 90 bp GGAGGTCTGGCAGGGAGCAGCGTGGGGTTTTCATCAGGGCCAGGGTaGCCTCGTCACTCCCAGGCTGAGGTCCTCGGCGCGCGGCGCGGG +
Preference number: 5 (lower is better)
Translates to: GGLAGSSVGFSSGPG*PRHSQAEVLGARRG
Trigger: CCCGCGCCGCGCGCCGAGGACCTCAGCCTGGGAGTGACGAGGCCACCCTGGCCCTGATGAAAACCCCACGCTGCTCCCTGCCAGACCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS CCA 90 bp GCCTCGTGGAGCAGCCCCAGTGGCCGTCCCAGTTGGGCCCAGCCCTaGCACCAGATGTGGGCCCCGGCAGTGAACATCCCTCCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: ASWSSPSGRPSWAQP*HQMWAPAVNIPPAG
Trigger: CCCAGCGGGAGGGATGTTCACTGCCGGGGCCCACATCTGGTGCCAGGGCTGGGCCCAACTGGGACGGCCACTGGGGCTGCTCCACGAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS-3UTR CAA 90 bp TGCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCGCAGTGTGGGTGGGGTaGGTGGCGCCGGCACAGAGA +
Preference number: 5 (lower is better)
Translates to: CPLLAFRCQGGPSSSRASAVWVG*VAPAQR
Trigger: TCTCTGTGCCGGCGCCACCAACCCCACCCACACTGC...GCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS GCA 90 bp GAGGGCCCGGTCCTACCCAGTGAGAAGCCTGCCACGGGCCACCACTaGTTCCGGGCAGGCCCCCTCCCAGCCCCCTATCTGCCCACAAGG +
Preference number: 5 (lower is better)
Translates to: EGPVLPSEKPATGHH*FRAGPLPAPYLPTR
Trigger: CCTTGTGGGCAGATAGGGGGCTGGGAGGGGGCCTGCCCGGAAGCAGTGGTGGCCCGTGGCAGGCTTCTCACTGGGTAGGACCGGGCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS GCA 90 bp GCAGGCAGGGGTCAGCCCAGAGTGAGTCACGGAGAACAGGCCACGTaGCCCAGGCCGAGGTTCCCTGAACGCCCCTCCTCAGCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: AGRGQPRVSHGEQAT*PRPRFPERPSSARG
Trigger: CCCCCGGGCTGAGGAGGGGCGTTCAGGGAACCTCGGCCTGGGGCACGTGGCCTGTTCTCCGTGACTCACTCTGGGCTGACCCCTGCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS CCA 90 bp TGTCTGGGGGCTCCGGCAGCAGGGGAGGCTCCTCGGGCTGCGCCGTaGGAGACACAGACTCCCGCACACCGTACAGCTGCCAGACGCGCA +
Preference number: 5 (lower is better)
Translates to: CLGAPAAGEAPRAAP*ETQTPAHRTAARRA
Trigger: TGCGCGTCTGGCAGCTGTACGGTGTGCGGGAGTCTGTGTCTCCCACGGCGCAGCCCGAGGAGCCTCCCCTGCTGCCGGAGCCCCCAGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360564.5
ENST00000534865.1
ENST00000535004.2
ENST00000535291.5
ENST00000542142.1
ENST00000545790.6
CDS CCA 90 bp GGCAGGCTGAGACCCCCAGGCCACAGGCAAACGTCAGCTCCCGCGTaGAGCCATCAGCCCCAGGGCCCTCAACGGTGCGTCCCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: GRLRPPGHRQTSAPA*SHQPQGPQRCVPSA
Trigger: GGCAGACGGGACGCACCGTTGAGGGCCCTGGGGCTGATGGCTCCACGCGGGAGCTGACGTTTGCCTGTGGCCTGGGGGTCTCAGCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS-3UTR CAA 90 bp GGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCGCTTAGACAGCTCCTCTaGCGTCTGCAGCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: GPQPEMLPPGPEEAGGGALRQLL*RLQLPC
Trigger: ACAGGGCAGCTGCAGACGCAAGAGGAGCTGTCTAAG...CGCACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS TCA 90 bp GAGAGCAGGGTGAGGGGGTGCAACAGAGGGCCCGGTCCTACCCAGTaGGAAGCCTGCCACGGGCCACCACTGCTTCCGGGCAGGCCCCCT +
Preference number: 5 (lower is better)
Translates to: ESRVRGCNRGPGPTQ*EACHGPPLLPGRPP
Trigger: AGGGGGCCTGCCCGGAAGCAGTGGTGGCCCGTGGCAGGCTTCTCACTGGGTAGGACCGGGCCCTCTGTTGCACCCCCTCACCCTGCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS-3UTR CAA 90 bp TCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTGTGCGGCTCTGGTCATGTaGTCCTGGAGGGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: SSRASTSPRDSGTVLALCAALVM*SWRGAG
Trigger: CCCCGCGCCCCTCCAGGACAACATGACCAGAGCCGC...ACAGAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp ATGCCGCCAGGCGGGAGGCTGAAGTCGGAGACGGGGCGCGGGTATCCTTCCTCTGCGGCTCTGGTCATGTaGTCCTGGAGGGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: MPPGGRLKSETGRGYPSSAALVM*SWRGAG
Trigger: CCCCGCGCCCCTCCAGGACAACATGACCAGAGCCGC...AGAGGAAGGATACCCGCGCCCCGTCTCCGACTTCAGCCTCCCGCCTGGCGGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS TCA 90 bp TCCCGTGGGAACGTCCGGACCCTGCAGGCAGGGGTCAGCCCAGAGTaGGTCACGGAGAACAGGCCACGTGCCCCAGGCCGAGGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: SRGNVRTLQAGVSPE*VTENRPRAPGRGSL
Trigger: CAGGGAACCTCGGCCTGGGGCACGTGGCCTGTTCTCCGTGACTCACTCTGGGCTGACCCCTGCCTGCAGGGTCCGGACGTTCCCACGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS-3UTR CAA 90 bp GCCGGCACAGAGAGGGGTGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGACACGACAGGTTCCTCTaGTTCCACTTGGTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: AGTERGGPPARDAPSRAGHDRFL*FHLVGA
Trigger: AGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTG...TCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCACCCCTCTCTGTGCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp CTGGCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCACGACAGGTTCCTCTaGTTCCACTTGGTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: LAAVRPDWAPFWSGHPSAHDRFL*FHLVGA
Trigger: AGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTG...AGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS TCA 90 bp GAGGGCGTAGTACATGAGTGCACGCACCGTGTCGTGCCCCAGTGGTaGGTCCCGTGGGAACGTCCGGACCCTGCAGGCAGGGGTCAGCCC +
Preference number: 5 (lower is better)
Translates to: EGVVHECTHRVVPQW*VPWERPDPAGRGQP
Trigger: GGGCTGACCCCTGCCTGCAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACACGGTGCGTGCACTCATGTACTACGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS GCA 90 bp CCGTGTCGTGCCCCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTaGAGGCAGGGGTCAGCCCAGAGTGAGTCACGGAGAACAGGCCAC +
Preference number: 5 (lower is better)
Translates to: PCRAPVVSPVGTSGP*RQGSAQSESRRTGH
Trigger: GTGGCCTGTTCTCCGTGACTCACTCTGGGCTGACCCCTGCCTGCAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS-3UTR CAA 90 bp CGCTGGTGCGCTCGTACACGGCGTCCACGCTGTCCAGGTGCAGCGGCAGGCCCCCACGACAGGTTCCTCTaGTTCCACTTGGTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: RWCARTRRPRCPGAAAGPHDRFL*FHLVGA
Trigger: AGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTG...GGGGCCTGCCGCTGCACCTGGACAGCGTGGACGCCGTGTACGAGCGCACCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CAA 90 bp CCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGCGGCTCTGGTCATGTaGTCCTGGAGGGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: PSGAATPRLVSQHSPSLGAALVM*SWRGAG
Trigger: CCCCGCGCCCCTCCAGGACAACATGACCAGAGCCGC...CCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS TCA 90 bp CGTAGCGCAGCGGGTCACCCACCGGGCCCTGGTAGTACGGCCGCATaGTGGAGTGTGCAGCGGCCACATGGCTTAACCCAATGGCGTGGC +
Preference number: 5 (lower is better)
Translates to: RSAAGHPPGPGSTAA*WSVQRPHGLTQWRG
Trigger: GCCACGCCATTGGGTTAAGCCATGTGGCCGCTGCACACTCCATCATGCGGCCGTACTACCAGGGCCCGGTGGGTGACCCGCTGCGCTACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360564.5
ENST00000534865.1
ENST00000535004.2
ENST00000535291.5
ENST00000545790.6
CDS-3UTR CAA 90 bp GTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTTTCCTCTTGTTCCACTaGGTGGGGGCTGGAGCCTGG +
Preference number: 5 (lower is better)
Translates to: VLIPRQHLPQGLRHSPCPFLLFH*VGAGAW
Trigger: CCAGGCTCCAGCCCCCACCAAGTGGAACAAGAGGAA...AGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp GCGGCGGTGCGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTTCGTTATGGTCGGCCTaGGAGAAGTCGATCTGGATG +
Preference number: 5 (lower is better)
Translates to: AAVRPDWAPFWSGHPSARSLWSA*EKSIWM
Trigger: CATCCAGATCGACTTCTCCAAGGCCGACCATAACGA...ACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCGCACCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp CCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCTTAAAGAAGACGATCTaGTGGTCGCTGGTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: PVPGWPVLIPRQHLPQGLLKKTI*WSLVRS
Trigger: CGAGCGCACCAGCGACCACAAGATCGTCTTCTTTAA...GAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp CAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGCCCAGCCCTACTCCGGCACAGTCCTaGCCCTCTGTGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QSLTRGQLRPCHLSLPSPTPAQS*PSVARL
Trigger: CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGT...AGGGCTGGGCAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp ATAGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCACTTAGACAGCTCCTCTaGCGTCTGCAGCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: IASGPGPLSTGRLVTVAALRQLL*RLQLPC
Trigger: ACAGGGCAGCTGCAGACGCAAGAGGAGCTGTCTAAG...TGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCTAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CAA 90 bp TCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCCTTAGACAGCTCCTCTaGCGTCTGCAGCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: SSSRASTSPRDSGTVLALLRQLL*RLQLPC
Trigger: ACAGGGCAGCTGCAGACGCAAGAGGAGCTGTCTAAG...GAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp GCACCGTGTCGTGCCCCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTCCACGCACGACAGGTTCCTCTaGTTCCACTTGGTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: APCRAPVVSPVGTSGPSTHDRFL*FHLVGA
Trigger: AGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTG...CGTGGAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACACGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CAA 90 bp TCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCAGACTCCGGCACAGTCCTaGCCCTCTGTGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: STPAATDPSACESPHTSQTPAQS*PSVARL
Trigger: CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGT...CTGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535004.2
CDS-3UTR CAA 90 bp TCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCCAGGGAGAGGTCATGTaGGTCTGGAACGCGTCACAG +
Preference number: 5 (lower is better)
Translates to: SSSRASTSPRDSGTVLALQGEVM*VWNASQ
Trigger: CTGTGACGCGTTCCAGACCAACATGACCTCTCCCTG...GAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS CCA 90 bp ACAACTTCACTGGGAATCCAGTTGCTGTGGGAGGGTCATGCCTCGTaGAGCAGCCCCAGTGGCCGTCCCAGTTGGGCCCAGCCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: TTSLGIQLLWEGHAS*SSPSGRPSWAQPWH
Trigger: GTGCCAGGGCTGGGCCCAACTGGGACGGCCACTGGGGCTGCTCCACGAGGCATGACCCTCCCACAGCAACTGGATTCCCAGTGAAGTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS-3UTR CAA 90 bp TGGGCCCCCAGCCCGAGATGCTCCCTCCAGGGCCGGAGGAGGCTGGCGGCGGTGCAGAAGTACTTGCCTTaGAAGAAGAAAGCTTCACCC +
Preference number: 5 (lower is better)
Translates to: WAPSPRCSLQGRRRLAAVQKYLP*KKKASP
Trigger: GGGTGAAGCTTTCTTCTTCAAAGGCAAGTACTTCTG...CACCGCCGCCAGCCTCCTCCGGCCCTGGAGGGAGCATCTCGGGCTGGGGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp CAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGGCAGTGTGGGTGGGGTaGGTGGCGCCGGCACAGAGA +
Preference number: 5 (lower is better)
Translates to: QSTQSLTRGQLRPCHLSLAVWVG*VAPAQR
Trigger: TCTCTGTGCCGGCGCCACCAACCCCACCCACACTGC...CAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS GCA 90 bp GTGGCCTCGTCCAGGATGCCGGTGGCCTCCAGGCCACCAAACTGCTaGATGGCTGTGATGGCCTTAGACAGCTCCTCTTGCGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VASSRMPVASRPPNC*MAVMALDSSSCVCS
Trigger: GCTGCAGACGCAAGAGGAGCTGTCTAAGGCCATCACAGCCATGCAGCAGTTTGGTGGCCTGGAGGCCACCGGCATCCTGGACGAGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
ENST00000545790.6
CDS GCA 90 bp AGGGTGGCCTCGTCCAGGATGCCGGTGGCCTCCAGGCCACCAAACTaGTGCATGGCTGTGATGGCCTTAGACAGCTCCTCTTGCGTCTGC +
Preference number: 5 (lower is better)
Translates to: RVASSRMPVASRPPN*CMAVMALDSSSCVC
Trigger: GCAGACGCAAGAGGAGCTGTCTAAGGCCATCACAGCCATGCAGCAGTTTGGTGGCCTGGAGGCCACCGGCATCCTGGACGAGGCCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
ENST00000545790.6
CDS GCA 90 bp AGAAAGCTTCACCCCGGATCTGGGCCACCGCGTCAAAGTGAGTGCTaGATCTGTGGGGCACGTCCTTCCTGGGCCTGCAGGGAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: RKLHPGSGPPRQSEC*ICGARPSWACRERA
Trigger: GGCTCTCTCCCTGCAGGCCCAGGAAGGACGTGCCCCACAGATGCAGCACTCACTTTGACGCGGTGGCCCAGATCCGGGGTGAAGCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537848.5
ENST00000542648.1
CDS CCA 90 bp TGGGGCACGTCCTTCCTGGGCGGTCCTGTGACATCTGGGGCTGGGTaGCACAAGGTCACAGCTTCTACCGGCCTCTGGCAATACCAGCTC +
Preference number: 5 (lower is better)
Translates to: WGTSFLGGPVTSGAG*HKVTASTGLWQYQL
Trigger: GAGCTGGTATTGCCAGAGGCCGGTAGAAGCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACAGGACCGCCCAGGAAGGACGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CAA 90 bp TCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTCTCGTTATGGTCGGCCTaGGAGAAGTCGATCTGGATG +
Preference number: 5 (lower is better)
Translates to: SSSRASTSPRDSGTVLALSLWSA*EKSIWM
Trigger: CATCCAGATCGACTTCTCCAAGGCCGACCATAACGA...GAGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp GGATGTCGGCGGCGCTGCCCGCCACCTCGTGGAAGTTCAGGGGCGCAATGTCGCTCGTTATGGTCGGCCTaGGAGAAGTCGATCTGGATG +
Preference number: 5 (lower is better)
Translates to: GCRRRCPPPRGSSGAQCRSLWSA*EKSIWM
Trigger: CATCCAGATCGACTTCTCCAAGGCCGACCATAACGA...GCGACATTGCGCCCCTGAACTTCCACGAGGTGGCGGGCAGCGCCGCCGACATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545671.6
CDS-3UTR CAA 90 bp GCCCTCTGCTGGCCTTCCGGTGCCAGGGTGGCCCGTCCTCATCCCGCGCCAGCACCTTCCTCTACGTTATaGTCCTTGAACACCCAGTAC +
Preference number: 5 (lower is better)
Translates to: ALCWPSGARVARPHPAPAPSSTL*SLNTQY
Trigger: GTACTGGGTGTTCAAGGACAATAACGTAGAGGAAGG...TGCTGGCGCGGGATGAGGACGGGCCACCCTGGCACCGGAAGGCCAGCAGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp CAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCTGAGCCTGACTCCGGCACAGTCCTaGCCCTCTGTGGCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QSTQSLTRGQLRPCHLSLTPAQS*PSVARL
Trigger: CAGCCTGGCCACAGAGGGCAAGGACTGTGCCGGAGT...CAGGCTCAGGTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS GCA 90 bp TCTCAAGACAACTTCACTGGGAATCCAGTTGCTGTGGGAGGGTCATaGCTCGTGGAGCAGCCCCAGTGGCCGTCCCAGTTGGGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SQDNFTGNPVAVGGS*LVEQPQWPSQLGPA
Trigger: GGCTGGGCCCAACTGGGACGGCCACTGGGGCTGCTCCACGAGGCATGACCCTCCCACAGCAACTGGATTCCCAGTGAAGTTGTCTTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS-3UTR CAA 90 bp AGCGTCAGGGCCTGGGCCGCTGTCCACAGGGCGCCTGGTGACAGTGGCGGCAGCCAGAAGTACTTGCCTTaGAAGAAGAAAGCTTCACCC +
Preference number: 5 (lower is better)
Translates to: SVRAWAAVHRAPGDSGGSQKYLP*KKKASP
Trigger: GGGTGAAGCTTTCTTCTTCAAAGGCAAGTACTTCTG...GCTGCCGCCACTGTCACCAGGCGCCCTGTGGACAGCGGCCCAGGCCCTGACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CAA 90 bp AGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTGGGGACACCCCTCCAGCCGCCAGAAGTACTaGCCTTTGAAGAAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: RHRRTSAWRRPACWGHPSSRQKY*PLKKKA
Trigger: AGCTTTCTTCTTCAAAGGCAAGTACTTCTGGCGGCT...GGAGGGGTGTCCCCAGCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CAA 90 bp CGGCCTGACTGGGCACCCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACATTAAAGAAGACGATCTaGTGGTCGCTGGTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: RPDWAPFWSGHPSARQSTLKKTI*WSLVRS
Trigger: CGAGCGCACCAGCGACCACAAGATCGTCTTCTTTAA...TGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGGGTGCCCAGTCAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS TCA 90 bp GGCTCCTTCGCAGCTTTAACCGGGAGGGTTACACGTACGGTCCTGTaGCATCTGGGGCTGGGTGGCACAAGGTCACAGCTTCTACCGGCC +
Preference number: 5 (lower is better)
Translates to: GSFAALTGRVTRTVL*HLGLGGTRSQLLPA
Trigger: GGCCGGTAGAAGCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACAGGACCGTACGTGTAACCCTCCCGGTTAAAGCTGCGAAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS GCA 90 bp AGAAGAAAGCTTCACCCCGGATCTGGGCCACCGCGTCAAAGTGAGTaGTGCATCTGTGGGGCACGTCCTTCCTGGGCCTGCAGGGAGAGA +
Preference number: 5 (lower is better)
Translates to: RRKLHPGSGPPRQSE*CICGARPSWACRER
Trigger: TCTCTCCCTGCAGGCCCAGGAAGGACGTGCCCCACAGATGCAGCACTCACTTTGACGCGGTGGCCCAGATCCGGGGTGAAGCTTTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537848.5
ENST00000542648.1
CDS-3UTR CAA 90 bp TGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGCTTAGACAGCTCCTCTaGCGTCTGCAGCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: WVPGCHLQLAIQHFPVLLLRQLL*RLQLPC
Trigger: ACAGGGCAGCTGCAGACGCAAGAGGAGCTGTCTAAG...CAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CAA 90 bp TTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGGGAGAGGTCATGTaGGTCTGGAACGCGTCACAG +
Preference number: 5 (lower is better)
Translates to: FWSGHPSARQSTQSLTRGQGEVM*VWNASQ
Trigger: CTGTGACGCGTTCCAGACCAACATGACCTCTCCCTG...TCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS CCA 90 bp AACCGGGAGGGTTACACGTACGGTCCTGTGACATCTGGGGCTGGGTaGCACAAGGTCACAGCTTCTACCGGCCTCTGGCAATACCAGCTC +
Preference number: 5 (lower is better)
Translates to: NREGYTYGPVTSGAG*HKVTASTGLWQYQL
Trigger: GAGCTGGTATTGCCAGAGGCCGGTAGAAGCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACAGGACCGTACGTGTAACCCTCCCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS-3UTR CAA 90 bp GCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGCACGACAGGTTCCTCTaGTTCCACTTGGTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: ATSSSPSSTFQYSWPRKKHDRFL*FHLVGA
Trigger: AGCCCCCACCAAGTGGAACAAGAGGAACCTGTCGTG...CTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CAA 90 bp GTCCTCATCCCGCGCCAGCACCTCCCCCAGGGACTCCGGCACAGTCCTTGCCCTTCTACGTTATTGTCCTaGAACACCCAGTACCTGTCT +
Preference number: 5 (lower is better)
Translates to: VLIPRQHLPQGLRHSPCPSTLLS*NTQYLS
Trigger: AGACAGGTACTGGGTGTTCAAGGACAATAACGTAGA...AGGGCAAGGACTGTGCCGGAGTCCCTGGGGGAGGTGCTGGCGCGGGATGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp GTGAGTCTCCACACACCAGCCAGTCCCGGGCCGTGGACTGTGGGTACCCGGGTGCCTTCCTCTACGTTATaGTCCTTGAACACCCAGTAC +
Preference number: 5 (lower is better)
Translates to: VSLHTPASPGPWTVGTRVPSSTL*SLNTQY
Trigger: GTACTGGGTGTTCAAGGACAATAACGTAGAGGAAGG...CACCCGGGTACCCACAGTCCACGGCCCGGGACTGGCTGGTGTGTGGAGACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS TCA 90 bp TCATCCGATGCACTCACGGCGGTTCCAGTAGTTCACTGGGATAGATaGCGGAGGGAGGGAAATGAGAGCCCAGGCAGGCTGAGACCCCCA +
Preference number: 5 (lower is better)
Translates to: SSDALTAVPVVHWDR*RREGNESPGRLRPP
Trigger: TGGGGGTCTCAGCCTGCCTGGGCTCTCATTTCCCTCCCTCCGTCATCTATCCCAGTGAACTACTGGAACCGCCGTGAGTGCATCGGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS TCA 90 bp CGCTGGGGGCACAGGCCAGACACTCGCAGGCCCTGCCTGACTTCCTaGTGCTGGGAATCCATGAGCTTGATGAAACATTCCTCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: RWGHRPDTRRPCLTS*CWESMSLMKHSSSW
Trigger: CCAGCTTGAGGAATGTTTCATCAAGCTCATGGATTCCCAGCATCAGGAAGTCAGGCAGGGCCTGCGAGTGTCTGGCCTGTGCCCCCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS GCA 90 bp CTCTGGCAATACCAGCTCTCAAGACAACTTCACTGGGAATCCAGTTaGTGTGGGAGGGTCATGCCTCGTGGAGCAGCCCCAGTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: LWQYQLSRQLHWESS*CGRVMPRGAAPVAV
Trigger: GACGGCCACTGGGGCTGCTCCACGAGGCATGACCCTCCCACAGCAACTGGATTCCCAGTGAAGTTGTCTTGAGAGCTGGTATTGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS CCA 90 bp AGGGACAAGGTGCATGTCCACCGAGAGACGACTCGACACAGAGCGTaGCTCCTTCGCAGCTTTAACCGGGAGGGTTACACGTACGGTCCT +
Preference number: 5 (lower is better)
Translates to: RDKVHVHRETTRHRA*LLRSFNREGYTYGP
Trigger: AGGACCGTACGTGTAACCCTCCCGGTTAAAGCTGCGAAGGAGCCACGCTCTGTGTCGAGTCGTCTCTCGGTGGACATGCACCTTGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS-3UTR CAA 90 bp GTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTTCGTTATGGTCGGCCTaGGAGAAGTCGATCTGGATG +
Preference number: 5 (lower is better)
Translates to: VGTRVPPPARHPALSSTPSLWSA*EKSIWM
Trigger: CATCCAGATCGACTTCTCCAAGGCCGACCATAACGA...AGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CAA 90 bp TGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTTAAAGAAGACGATCTaGTGGTCGCTGGTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: CGYPGATSSSPSSTFQYSLKKTI*WSLVRS
Trigger: CGAGCGCACCAGCGACCACAAGATCGTCTTCTTTAA...GGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS CCA 90 bp GCTTCTACCGGCCTCTGGCAATACCAGCTCTCAAGACAACTTCACTaGGAATCCAGTTGCTGTGGGAGGGTCATGCCTCGTGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: ASTGLWQYQLSRQLH*ESSCCGRVMPRGAA
Trigger: GGCTGCTCCACGAGGCATGACCCTCCCACAGCAACTGGATTCCCAGTGAAGTTGTCTTGAGAGCTGGTATTGCCAGAGGCCGGTAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS-3UTR CAA 90 bp GCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCCTGGCCACGGAAGAAGTTAAAGAAGACGATCTaGTGGTCGCTGGTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: ATSSSPSSTFQYSWPRKKLKKTI*WSLVRS
Trigger: CGAGCGCACCAGCGACCACAAGATCGTCTTCTTTAA...CTTCTTCCGTGGCCAGGAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CAA 90 bp CACGGAAGAAGTAGGAGGCACCGTCGGACCAGCGCATGGCGTCGTCCAGCGTGCTCTACGTTATTGTCCTaGAACACCCAGTACCTGTCT +
Preference number: 5 (lower is better)
Translates to: HGRSRRHRRTSAWRRPACSTLLS*NTQYLS
Trigger: AGACAGGTACTGGGTGTTCAAGGACAATAACGTAGA...GCACGCTGGACGACGCCATGCGCTGGTCCGACGGTGCCTCCTACTTCTTCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CAA 90 bp CCTTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGCAGAAGTACTTGCCTTaGAAGAAGAAAGCTTCACCC +
Preference number: 5 (lower is better)
Translates to: PSGAATPRLVSQHSPSLGQKYLP*KKKASP
Trigger: GGGTGAAGCTTTCTTCTTCAAAGGCAAGTACTTCTG...CCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp TCCACGCCCGCAGCCACAGATCCATCGGCCTGTGAGTCTCCACACACCAGCCAGCAGAAGTACTTGCCTTaGAAGAAGAAAGCTTCACCC +
Preference number: 5 (lower is better)
Translates to: STPAATDPSACESPHTSQQKYLP*KKKASP
Trigger: GGGTGAAGCTTTCTTCTTCAAAGGCAAGTACTTCTG...CTGGCTGGTGTGTGGAGACTCACAGGCCGATGGATCTGTGGCTGCGGGCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS-3UTR CAA 90 bp TTCTGGAGCGGCCACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGAAGCCGCCAGAAGTACTaGCCTTTGAAGAAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: FWSGHPSARQSTQSLTRGSRQKY*PLKKKA
Trigger: AGCTTTCTTCTTCAAAGGCAAGTACTTCTGGCGGCT...TCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGTGGCCGCTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp CTGTGGGTACCCGGGTGCCACCTCCAGCTCGCCATCCAGCACTTTCCAGTACTCAGCCGCCAGAAGTACTaGCCTTTGAAGAAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LWVPGCHLQLAIQHFPVLSRQKY*PLKKKA
Trigger: AGCTTTCTTCTTCAAAGGCAAGTACTTCTGGCGGCT...GAGTACTGGAAAGTGCTGGATGGCGAGCTGGAGGTGGCACCCGGGTACCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535004.2
ENST00000545790.6
CDS TCA 90 bp CAGGGCCCATCTGAGATAGTTTTGACTCCGGGGGACAGCAGAAGGTaGGTGGGTCACATAGTGTCCCGCCAAATTCACGTCCATCCGGAA +
Preference number: 5 (lower is better)
Translates to: QGPSEIVLTPGDSRR*VGHIVSRQIHVHPE
Trigger: TTCCGGATGGACGTGAATTTGGCGGGACACTATGTGACCCACTCACCTTCTGCTGTCCCCCGGAGTCAAAACTATCTCAGATGGGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS CCA 90 bp ACATCTGGGGCTGGGTGGCACAAGGTCACAGCTTCTACCGGCCTCTaGCAATACCAGCTCTCAAGACAACTTCACTGGGAATCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: TSGAGWHKVTASTGL*QYQLSRQLHWESSC
Trigger: GCAACTGGATTCCCAGTGAAGTTGTCTTGAGAGCTGGTATTGCCAGAGGCCGGTAGAAGCTGTGACCTTGTGCCACCCAGCCCCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS CCA 90 bp ACATCTGGGGCTGGGTGGCACAAGGTCACAGCTTCTACCGGCCTCTaGCAATACCAGCTCTCAAGACAACTTCACTGGGAATCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: TSGAGWHKVTASTGL*QYQLSRQLHWESSW
Trigger: CCAACTGGATTCCCAGTGAAGTTGTCTTGAGAGCTGGTATTGCCAGAGGCCGGTAGAAGCTGTGACCTTGTGCCACCCAGCCCCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CAA 90 bp TCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACAGCCGCCAGAAGTACTaGCCTTTGAAGAAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: SARQSTQSLTRGQLRPCHSRQKY*PLKKKA
Trigger: AGCTTTCTTCTTCAAAGGCAAGTACTTCTGGCGGCT...GTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp TCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTGCCACCCTTCCTCTACGTTATaGTCCTTGAACACCCAGTAC +
Preference number: 5 (lower is better)
Translates to: SARQSTQSLTRGQLRPCHPSSTL*SLNTQY
Trigger: GTACTGGGTGTTCAAGGACAATAACGTAGAGGAAGG...GTGGCAAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS-3UTR CAA 90 bp TGCCGGTCCCGCGTCAGCCGCCAGAAGTACTTGCCTTTGAAGAAGAAAGCTTCATCGTTATGGTCGGCCTaGGAGAAGTCGATCTGGATG +
Preference number: 5 (lower is better)
Translates to: CRSRVSRQKYLPLKKKASSLWSA*EKSIWM
Trigger: CATCCAGATCGACTTCTCCAAGGCCGACCATAACGA...TGAAGCTTTCTTCTTCAAAGGCAAGTACTTCTGGCGGCTGACGCGGGACCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS-3UTR CAA 90 bp ACCCCTCGGCTCGTCAGTCAACACAGTCCCTCACTAGGGGACAGCTCCGTCCTTTCTACGTTATTGTCCTaGAACACCCAGTACCTGTCT +
Preference number: 5 (lower is better)
Translates to: TPRLVSQHSPSLGDSSVLSTLLS*NTQYLS
Trigger: AGACAGGTACTGGGTGTTCAAGGACAATAACGTAGA...AAGGACGGAGCTGTCCCCTAGTGAGGGACTGTGTTGACTGACGAGCCGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360564.5
ENST00000535291.5
CDS TCA 72 bp CACCGCTTCAGCGGGCGGGGGCCGAGATCTACGCTCTaGGCATACAGAGCGCCAGGGAGCTGCGGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: HRFSGRGPRSTL*AYRAPGSCGEG
Trigger: GCCCTCCCCGCAGCTCCCTGGCGCTCTGTATGCTCAGAGCGTAGATCTCGGCCCCCGCCCGCTGAAGCGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537848.5
CDS CCA 72 bp CCAGATGTGGGCCCCGGCAGTGAACATCCCTCCCGCTaGGGGCACAGGCCAGACACTCGCAGGCCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PDVGPGSEHPSR*GHRPDTRRPCL
Trigger: CAGGCAGGGCCTGCGAGTGTCTGGCCTGTGCCCCCAGCGGGAGGGATGTTCACTGCCGGGGCCCACATCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS TCA 72 bp GGCAGCGCGGGACAGGGCATCCTGCGGCAGAGCCCCTaGCCTGAGCGGCATGGGACAGGCATCCTTGTGTGG +
Preference number: 6 (lower is better)
Translates to: GSAGQGILRQSP*PERHGTGILVW
Trigger: CCACACAAGGATGCCTGTCCCATGCCGCTCAGGTCAGGGGCTCTGCCGCAGGATGCCCTGTCCCGCGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537848.5
ENST00000542648.1
CDS GCA 72 bp GTCCTACCCAGTGAGAAGCCTGCCACGGGCCACCACTaGTTCCGGGCAGGCCCCCTCCCAGCCCCCTATCTG +
Preference number: 6 (lower is better)
Translates to: VLPSEKPATGHH*FRAGPLPAPYL
Trigger: CAGATAGGGGGCTGGGAGGGGGCCTGCCCGGAAGCAGTGGTGGCCCGTGGCAGGCTTCTCACTGGGTAGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS CCA 72 bp AGACCCCCAGGCCACAGGCAAACGTCAGCTCCCGCGTaGAGCCATCAGCCCCAGGGCCCTCAACGGTGCGTC +
Preference number: 6 (lower is better)
Translates to: RPPGHRQTSAPA*SHQPQGPQRCV
Trigger: GACGCACCGTTGAGGGCCCTGGGGCTGATGGCTCCACGCGGGAGCTGACGTTTGCCTGTGGCCTGGGGGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS CCA 72 bp AGCAGCCCCAGTGGCCGTCCCAGTTGGGCCCAGCCCTaGCACCAGATGTGGGCCCCGGCAGTGAACATCCCT +
Preference number: 6 (lower is better)
Translates to: SSPSGRPSWAQP*HQMWAPAVNIP
Trigger: AGGGATGTTCACTGCCGGGGCCCACATCTGGTGCCAGGGCTGGGCCCAACTGGGACGGCCACTGGGGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS TCA 72 bp AACGTCCGGACCCTGCAGGCAGGGGTCAGCCCAGAGTaGGTCACGGAGAACAGGCCACGTGCCCCAGGCCGA +
Preference number: 6 (lower is better)
Translates to: NVRTLQAGVSPE*VTENRPRAPGR
Trigger: TCGGCCTGGGGCACGTGGCCTGTTCTCCGTGACTCACTCTGGGCTGACCCCTGCCTGCAGGGTCCGGACGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS GCA 72 bp GCCCCAGTGGTGAGTCCCGTGGGAACGTCCGGACCCTaGAGGCAGGGGTCAGCCCAGAGTGAGTCACGGAGA +
Preference number: 6 (lower is better)
Translates to: APVVSPVGTSGP*RQGSAQSESRR
Trigger: TCTCCGTGACTCACTCTGGGCTGACCCCTGCCTGCAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS TCA 72 bp GTACATGAGTGCACGCACCGTGTCGTGCCCCAGTGGTaGGTCCCGTGGGAACGTCCGGACCCTGCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: VHECTHRVVPQW*VPWERPDPAGR
Trigger: CCTGCCTGCAGGGTCCGGACGTTCCCACGGGACTCACCACTGGGGCACGACACGGTGCGTGCACTCATGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS GCA 72 bp CTTCACCCCGGATCTGGGCCACCGCGTCAAAGTGAGTaGTGCATCTGTGGGGCACGTCCTTCCTGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: LHPGSGPPRQSE*CICGARPSWAG
Trigger: CCCCGCCCAGGAAGGACGTGCCCCACAGATGCAGCACTCACTTTGACGCGGTGGCCCAGATCCGGGGTGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360564.5
ENST00000534865.1
ENST00000535004.2
ENST00000535291.5
CDS GCA 72 bp GGTCAGCCCAGAGTGAGTCACGGAGAACAGGCCACGTaGCCCAGGCCGAGGTTCCCTGAACGCCCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: GQPRVSHGEQAT*PRPRFPERPSS
Trigger: TGAGGAGGGGCGTTCAGGGAACCTCGGCCTGGGGCACGTGGCCTGTTCTCCGTGACTCACTCTGGGCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS CCA 72 bp CTGGGAATCCAGTTGCTGTGGGAGGGTCATGCCTCGTaGAGCAGCCCCAGTGGCCGTCCCAGTTGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: LGIQLLWEGHAS*SSPSGRPSWAQ
Trigger: CTGGGCCCAACTGGGACGGCCACTGGGGCTGCTCCACGAGGCATGACCCTCCCACAGCAACTGGATTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS TCA 72 bp GCGGGTCACCCACCGGGCCCTGGTAGTACGGCCGCATaGTGGAGTGTGCAGCGGCCACATGGCTTAACCCAA +
Preference number: 6 (lower is better)
Translates to: AGHPPGPGSTAA*WSVQRPHGLTQ
Trigger: TTGGGTTAAGCCATGTGGCCGCTGCACACTCCATCATGCGGCCGTACTACCAGGGCCCGGTGGGTGACCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360564.5
ENST00000534865.1
ENST00000535004.2
ENST00000535291.5
ENST00000545790.6
CDS GCA 72 bp CTTCACCCCGGATCTGGGCCACCGCGTCAAAGTGAGTaGTGCATCTGTGGGGCACGTCCTTCCTGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: LHPGSGPPRQSE*CICGARPSWAC
Trigger: GCAGGCCCAGGAAGGACGTGCCCCACAGATGCAGCACTCACTTTGACGCGGTGGCCCAGATCCGGGGTGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537848.5
ENST00000542648.1
CDS GCA 72 bp ATGGCTGTGATGGCCTTAGACAGCTCCTCTTGCGTCTaGAGCTGCCCTGTTGTGGGGTCAGCCGGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: MAVMALDSSSCV*SCPVVGSAGGR
Trigger: CCTGCCCCCGGCTGACCCCACAACAGGGCAGCTGCAGACGCAAGAGGAGCTGTCTAAGGCCATCACAGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
ENST00000545790.6
CDS GCA 72 bp CTGTTGTGGGGTCAGCCGGGGGCAGGTAACCGAACCTaGTTAGCCACTCCTGAGGGCAGAGAGCAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: LLWGQPGAGNRT*LATPEGREQGE
Trigger: CTCACCCTGCTCTCTGCCCTCAGGAGTGGCTAAGCAGGTTCGGTTACCTGCCCCCGGCTGACCCCACAACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535291.5
CDS CCA 72 bp CACGTCCTTCCTGGGCGGTCCTGTGACATCTGGGGCTaGGTGGCACAAGGTCACAGCTTCTACCGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: HVLPGRSCDIWG*VAQGHSFYRPL
Trigger: CAGAGGCCGGTAGAAGCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACAGGACCGCCCAGGAAGGACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS CAA 90 bp GCCACCAAACTGCTGCATGGCTGTGATGGCCTTAGACAGCTCCTCTaGCGTCTGCAGCTGCCCTGTTGTGGGGTCAGCCGGGGGCAGGTA +
Preference number: 6 (lower is better)
Translates to: ATKLLHGCDGLRQLL*RLQLPCCGVSRGQV
Trigger: TACCTGCCCCCGGCTGACCCCACAACAGGGCAGCTGCAGACGCAAGAGGAGCTGTCTAAGGCCATCACAGCCATGCAGCAGTTTGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
ENST00000545790.6
CDS CCA 72 bp TCCTTCCTGGGCGGTCCTGTGACATCTGGGGCTGGGTaGCACAAGGTCACAGCTTCTACCGGCCTCTGGCAA +
Preference number: 6 (lower is better)
Translates to: SFLGGPVTSGAG*HKVTASTGLWQ
Trigger: TTGCCAGAGGCCGGTAGAAGCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACAGGACCGCCCAGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545790.6
CDS CAA 72 bp CTGCTGCATGGCTGTGATGGCCTTAGACAGCTCCTCTaGCGTCTGCAGCTGCCCTGTTGTGGGGTCAGCCGG +
Preference number: 6 (lower is better)
Translates to: LLHGCDGLRQLL*RLQLPCCGVSR
Trigger: CCGGCTGACCCCACAACAGGGCAGCTGCAGACGCAAGAGGAGCTGTCTAAGGCCATCACAGCCATGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
ENST00000545790.6
CDS GCA 72 bp TCCAGGATGCCGGTGGCCTCCAGGCCACCAAACTGCTaGATGGCTGTGATGGCCTTAGACAGCTCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: SRMPVASRPPNC*MAVMALDSSSC
Trigger: GCAAGAGGAGCTGTCTAAGGCCATCACAGCCATGCAGCAGTTTGGTGGCCTGGAGGCCACCGGCATCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360564.5
ENST00000535004.2
ENST00000535291.5
ENST00000545790.6
CDS CCA 72 bp GGAGGGTTACACGTACGGTCCTGTGACATCTGGGGCTaGGTGGCACAAGGTCACAGCTTCTACCGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: GGLHVRSCDIWG*VAQGHSFYRPL
Trigger: CAGAGGCCGGTAGAAGCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACAGGACCGTACGTGTAACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS CAA 90 bp AGCTGTGCGTTTCCCAGGACTCTGAGCCACGATTTGGGGCAAATGTaGCGTGGGACAGGGATGAGGACAGACAGACCCCAGCGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: SCAFPRTLSHDLGQM*RGTGMRTDRPQRVV
Trigger: CACCACCCGCTGGGGTCTGTCTGTCCTCATCCCTGTCCCACGCAACATTTGCCCCAAATCGTGGCTCAGAGTCCTGGGAAACGCACAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS TCA 72 bp GCACTCACGGCGGTTCCAGTAGTTCACTGGGATAGATaGCGGAGGGAGGGAAATGAGAGCCCAGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ALTAVPVVHWDR*RREGNESPGRL
Trigger: CAGCCTGCCTGGGCTCTCATTTCCCTCCCTCCGTCATCTATCCCAGTGAACTACTGGAACCGCCGTGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS CCA 72 bp GGTTACACGTACGGTCCTGTGACATCTGGGGCTGGGTaGCACAAGGTCACAGCTTCTACCGGCCTCTGGCAA +
Preference number: 6 (lower is better)
Translates to: GYTYGPVTSGAG*HKVTASTGLWQ
Trigger: TTGCCAGAGGCCGGTAGAAGCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACAGGACCGTACGTGTAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS CCA 72 bp GTGCATGTCCACCGAGAGACGACTCGACACAGAGCGTaGCTCCTTCGCAGCTTTAACCGGGAGGGTTACACG +
Preference number: 6 (lower is better)
Translates to: VHVHRETTRHRA*LLRSFNREGYT
Trigger: CGTGTAACCCTCCCGGTTAAAGCTGCGAAGGAGCCACGCTCTGTGTCGAGTCGTCTCTCGGTGGACATGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS CAA 90 bp AGTCGGCCACACAGCTGTGCGTTTCCCAGGACTCTGAGCCACGATTaGGGGCAAATGTTGCGTGGGACAGGGATGAGGACAGACAGACCC +
Preference number: 6 (lower is better)
Translates to: SRPHSCAFPRTLSHD*GQMLRGTGMRTDRP
Trigger: GGGTCTGTCTGTCCTCATCCCTGTCCCACGCAACATTTGCCCCAAATCGTGGCTCAGAGTCCTGGGAAACGCACAGCTGTGTGGCCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS CAA 90 bp CCTCTGGCAATACCAGCTCTCAAGACAACTTCACTGGGAATCCAGTaGCTGTGGGAGGGTCATGCCTCGTGGAGCAGCCCCAGTGGCCGT +
Preference number: 6 (lower is better)
Translates to: PLAIPALKTTSLGIQ*LWEGHASWSSPSGR
Trigger: ACGGCCACTGGGGCTGCTCCACGAGGCATGACCCTCCCACAGCAACTGGATTCCCAGTGAAGTTGTCTTGAGAGCTGGTATTGCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS TCA 72 bp GCAGCTTTAACCGGGAGGGTTACACGTACGGTCCTGTaGCATCTGGGGCTGGGTGGCACAAGGTCACAGCTT +
Preference number: 6 (lower is better)
Translates to: AALTGRVTRTVL*HLGLGGTRSQL
Trigger: AAGCTGTGACCTTGTGCCACCCAGCCCCAGATGTCACAGGACCGTACGTGTAACCCTCCCGGTTAAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS CAA 72 bp TTTCCCAGGACTCTGAGCCACGATTTGGGGCAAATGTaGCGTGGGACAGGGATGAGGACAGACAGACCCCAG +
Preference number: 6 (lower is better)
Translates to: FPRTLSHDLGQM*RGTGMRTDRPQ
Trigger: CTGGGGTCTGTCTGTCCTCATCCCTGTCCCACGCAACATTTGCCCCAAATCGTGGCTCAGAGTCCTGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS CAA 72 bp CACAGCTGTGCGTTTCCCAGGACTCTGAGCCACGATTaGGGGCAAATGTTGCGTGGGACAGGGATGAGGACA +
Preference number: 6 (lower is better)
Translates to: HSCAFPRTLSHD*GQMLRGTGMRT
Trigger: TGTCCTCATCCCTGTCCCACGCAACATTTGCCCCAAATCGTGGCTCAGAGTCCTGGGAAACGCACAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542142.1
CDS CCA 72 bp GCTGGGTGGCACAAGGTCACAGCTTCTACCGGCCTCTaGCAATACCAGCTCTCAAGACAACTTCACTGGGAA +
Preference number: 6 (lower is better)
Translates to: AGWHKVTASTGL*QYQLSRQLHWE
Trigger: TTCCCAGTGAAGTTGTCTTGAGAGCTGGTATTGCCAGAGGCCGGTAGAAGCTGTGACCTTGTGCCACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542142.1
ENST00000545790.6
CDS TCA 72 bp TCTGAGATAGTTTTGACTCCGGGGGACAGCAGAAGGTaGGTGGGTCACATAGTGTCCCGCCAAATTCACGTC +
Preference number: 6 (lower is better)
Translates to: SEIVLTPGDSRR*VGHIVSRQIHV
Trigger: GACGTGAATTTGGCGGGACACTATGTGACCCACTCACCTTCTGCTGTCCCCCGGAGTCAAAACTATCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534865.1
CDS TCA 72 bp CCCGCCAAATTCACGTCCATCCGGAACCTTAGAATATaGCCTGGTTTGGAAATAGGGTTGGCTGGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: PAKFTSIRNLRI*PGLEIGLAGCG
Trigger: ACCACACCCAGCCAACCCTATTTCCAAACCAGGTCATATTCTAAGGTTCCGGATGGACGTGAATTTGGCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534865.1